Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1474
Parameters: 2 7 7 80 10 50 1000
Length:  7790

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
546--571
2
13.0
2
100
0
52
50
0
0
50
1.00
1373--1402
11
2.6
11
94
5
51
40
0
0
60
0.97
1360--1402
18
2.4
19
80
11
54
34
0
2
62
1.08
1589--1624
16
2.2
17
90
5
56
30
8
2
58
1.42
2470--2516
23
2.0
24
83
4
60
44
0
0
55
0.99
3778--3841
21
3.2
21
80
10
64
56
0
1
42
1.09
3817--3873
28
2.0
28
86
6
80
47
0
1
50
1.11
4295--4365
26
2.7
27
74
8
67
47
2
0
49
1.16
5396--5424
2
15.0
2
92
7
51
0
48
0
51
1.00
5424--5466
2
23.0
2
86
13
65
53
0
0
46
1.00
5424--5464
9
4.9
9
91
8
61
53
0
0
46
1.00
5424--5468
11
4.1
11
88
11
74
53
0
0
46
1.00
5424--5466
13
3.5
13
93
6
72
53
0
0
46
1.00
5514--5557
22
2.0
22
95
0
79
45
15
18
20
1.85

Tables:   1

The End!