Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1480
Parameters: 2 7 7 80 10 50 1000
Length:  44069

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9067--9148
28
2.9
28
82
7
96
28
17
30
24
1.97
9131--9301
51
3.3
50
75
7
171
33
11
25
29
1.91
11801--11826
13
2.0
13
100
0
52
38
15
15
30
1.88
11780--11846
33
2.0
33
88
0
98
43
16
14
25
1.86
11866--11933
19
3.9
18
76
23
83
38
14
11
35
1.83
11888--11912
13
1.9
13
100
0
50
32
16
16
36
1.90
11869--11931
32
2.0
32
96
0
117
36
15
12
34
1.86
11989--12045
21
2.7
21
97
0
105
36
19
10
33
1.86
12050--12114
1
65.0
1
89
0
85
3
1
3
92
0.51
12044--12114
28
2.6
28
86
2
99
7
1
2
88
0.65
15187--15723
58
9.4
57
72
13
213
26
12
13
47
1.78
15179--15535
115
3.1
114
77
10
271
26
12
13
47
1.78
15275--15421
57
2.5
57
78
13
149
26
12
13
46
1.79
15379--15598
29
7.9
29
69
21
121
27
11
15
45
1.81
15350--15607
29
9.1
29
66
22
120
27
11
14
46
1.79
20717--20831
51
2.3
51
83
6
144
31
14
12
41
1.83
21908--22005
51
1.9
50
89
2
151
27
18
10
43
1.82
31772--32209
80
5.5
79
79
4
418
28
25
12
33
1.92
31767--32209
161
2.8
159
79
5
434
28
25
12
33
1.92
38762--38966
32
6.3
33
72
8
152
38
17
12
32
1.87

Tables:   1

The End!