Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1481
Parameters: 2 7 7 80 10 50 1000
Length:  56718

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39--113
20
3.8
20
78
0
87
34
13
12
40
1.81
39--116
40
2.0
39
87
2
111
34
12
12
39
1.82
14137--14208
10
6.8
10
81
10
81
86
9
2
1
0.74
14135--14208
27
2.8
27
82
15
84
86
9
2
1
0.73
14137--14196
22
2.8
21
90
7
93
88
10
1
0
0.59
14135--14196
1
62.0
1
77
0
61
88
9
1
0
0.58
14136--14189
12
4.8
11
86
13
83
88
11
0
0
0.50
15428--16395
32
32.2
30
89
5
885
29
32
17
19
1.95
16923--16997
20
3.8
20
78
0
87
34
13
12
40
1.81
16923--17000
40
2.0
39
87
2
111
34
12
12
39
1.82
17917--17959
21
2.0
21
100
0
86
18
9
9
62
1.51
17926--17970
21
2.2
21
84
4
56
24
11
11
53
1.68
23089--23386
146
2.0
145
94
0
515
27
13
28
30
1.94
24548--24581
7
4.9
7
85
0
50
50
0
0
50
1.00
25143--25176
15
2.1
16
89
10
52
88
5
0
5
0.64
26343--26393
25
2.0
25
100
0
102
27
25
19
27
1.99
30339--30370
2
16.5
2
93
6
57
46
0
53
0
1.00
32789--32831
21
2.0
22
86
4
61
4
6
11
76
1.13
32794--32842
24
2.0
23
84
7
62
8
8
6
77
1.12
33165--33226
20
3.2
19
75
20
56
61
0
0
38
0.96
33413--33469
30
1.9
29
86
10
80
36
0
0
63
0.95
33424--33497
23
3.4
21
75
14
69
37
1
0
60
1.05
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33434--33498
23
3.0
21
80
14
87
40
1
0
58
1.07
33412--33479
27
2.6
27
71
13
70
41
0
0
58
0.98
33590--33651
32
1.9
32
96
0
115
41
0
1
56
1.09
34953--34997
2
22.5
2
100
0
90
51
0
48
0
1.00
37937--37987
25
2.0
25
100
0
102
15
7
21
54
1.66
38346--38385
19
2.1
19
100
0
80
32
10
20
37
1.85
40806--40892
40
2.2
40
93
0
147
18
11
20
49
1.78
43230--43668
224
2.0
217
84
5
569
25
12
19
41
1.87
49324--49350
10
2.7
10
100
0
54
0
62
0
37
0.95
49704--49784
40
2.0
40
83
9
103
40
0
1
58
1.06
50763--50817
12
4.2
13
77
20
53
40
1
0
58
1.09
54295--54329
2
17.5
2
100
0
70
48
0
51
0
1.00

Tables:   1

The End!