Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1486
Parameters: 2 7 7 80 10 50 1000
Length:  38725

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
355--399
20
2.2
21
84
7
58
33
0
4
62
1.15
900--938
12
3.3
12
82
7
53
82
0
17
0
0.68
8721--8849
52
2.5
52
92
0
213
27
17
19
35
1.94
8858--8882
13
1.9
13
100
0
50
36
16
16
32
1.90
8928--8989
33
1.9
33
90
3
99
38
16
9
35
1.81
9286--9324
20
1.9
21
94
5
71
20
17
20
41
1.91
11903--11929
13
2.1
13
100
0
54
37
14
7
40
1.74
12014--12044
13
2.4
13
100
0
62
32
16
12
38
1.86
14120--14193
19
3.8
19
87
5
96
37
12
16
33
1.85
14159--14223
32
2.0
32
90
3
103
43
15
12
29
1.83
15123--15179
20
2.8
20
75
0
60
31
10
14
43
1.79
15092--15226
70
1.9
70
89
3
209
28
15
13
42
1.85
25666--25691
13
2.0
13
100
0
52
30
15
15
38
1.88
27769--27811
20
2.1
20
86
4
59
9
30
44
16
1.79
28251--28289
13
3.0
13
96
0
69
30
20
15
33
1.94
30360--30398
15
2.6
15
88
8
53
12
17
15
53
1.72
34404--34429
13
2.0
13
100
0
52
30
15
15
38
1.88
34385--34447
32
2.0
32
90
6
101
28
14
14
42
1.84
34565--34600
18
1.9
19
94
5
65
36
22
11
30
1.89

Tables:   1

The End!