Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1488
Parameters: 2 7 7 80 10 50 1000
Length:  77150

Tables:   1   

This is table  1  of  1  ( 53 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
796--845
14
3.6
14
81
10
50
28
2
2
68
1.12
1438--1465
2
14.0
2
100
0
56
50
0
0
50
1.00
2860--2918
23
2.7
21
75
10
64
45
0
1
52
1.10
3347--3399
21
2.7
20
79
5
54
39
3
3
52
1.37
3677--3721
3
15.0
3
100
0
90
33
0
0
66
0.92
4418--4458
21
2.0
21
90
4
66
48
2
9
39
1.49
5102--5142
12
3.3
12
83
6
55
39
0
0
60
0.96
5102--5144
13
3.4
13
80
3
52
39
0
0
60
0.97
6977--7025
19
2.6
19
77
3
55
40
0
0
59
0.98
7948--7984
14
2.6
15
87
8
51
45
0
0
54
1.00
8581--8621
21
2.0
21
85
0
55
41
2
2
53
1.27
9514--9568
18
3.4
16
72
20
51
40
0
0
60
0.97
9680--9714
2
17.5
2
93
0
61
45
0
2
51
1.16
11765--11794
2
15.0
2
92
0
51
46
0
3
50
1.18
17433--17496
22
2.9
22
77
15
69
45
1
0
53
1.10
17479--17530
23
2.3
22
83
12
61
34
5
3
55
1.42
17783--17823
7
6.0
7
83
13
50
43
0
0
56
0.99
18924--18994
25
3.0
23
76
15
74
52
1
2
43
1.24
19022--19051
11
2.6
12
89
10
53
76
0
0
23
0.78
19647--19710
34
1.9
33
81
15
78
34
3
0
62
1.11
20244--20290
3
15.7
3
95
0
85
29
0
2
68
1.02
20914--20947
10
3.4
10
83
0
50
35
0
0
64
0.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21268--21339
23
3.0
23
76
20
67
38
0
6
54
1.28
21379--21446
32
2.2
32
82
15
88
47
2
0
50
1.16
23413--23438
2
13.0
2
100
0
52
50
0
0
50
1.00
24933--24974
21
2.0
21
86
13
61
40
0
0
59
0.97
33322--33359
18
2.2
17
90
4
58
47
0
0
52
1.00
33376--33428
22
2.4
22
84
12
65
49
0
1
49
1.12
33376--33428
21
2.4
21
84
12
63
49
0
1
49
1.12
36964--37007
18
2.4
18
85
7
54
68
2
2
27
1.14
38041--38066
8
3.2
8
100
0
52
38
0
0
61
0.96
38024--38095
16
4.4
16
68
23
51
43
0
1
55
1.08
39267--39360
13
6.9
13
69
16
57
53
1
0
45
1.07
43806--43849
23
1.9
23
90
0
70
50
2
0
47
1.13
44498--44542
21
2.1
22
83
4
56
60
0
2
37
1.09
44501--44562
27
2.4
26
79
15
74
53
0
1
45
1.10
44664--44728
18
3.6
17
75
20
62
50
1
0
47
1.10
45701--45725
2
12.5
2
100
0
50
52
0
0
48
1.00
59936--59998
32
2.0
32
93
0
108
41
20
6
31
1.77
63037--63519
242
2.0
242
90
0
770
36
18
14
31
1.91
69671--69715
23
2.0
23
81
0
54
35
8
17
37
1.81
69657--69832
77
2.3
77
84
3
219
32
11
18
36
1.88
69867--69893
2
13.5
2
100
0
54
51
0
0
48
1.00
70092--70149
29
2.0
30
86
3
82
46
17
12
24
1.81
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
70168--70205
15
2.6
15
95
4
69
52
13
5
28
1.61
70197--70262
28
2.3
28
76
2
69
48
13
9
28
1.73
70268--70313
14
3.4
13
84
3
56
58
23
4
13
1.52
71162--71204
2
22.5
2
88
9
63
44
0
2
53
1.13
73295--73336
22
1.9
22
100
0
84
40
0
19
40
1.51
75981--76016
18
2.1
17
89
5
54
16
2
2
77
1.00
76286--76338
23
2.3
24
75
12
58
43
1
1
52
1.23
76408--76446
13
3.2
13
85
7
55
41
0
0
58
0.98
76493--76543
25
2.0
26
85
11
70
47
0
1
50
1.12

Tables:   1

The End!