Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1494
Parameters: 2 7 7 80 10 50 1000
Length:  26039

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1894--1939
16
2.7
18
74
19
53
39
2
2
56
1.24
2500--2540
2
20.5
2
100
0
82
51
0
0
48
1.00
3223--3284
15
4.3
15
76
15
69
56
0
0
43
0.99
3212--3296
44
2.0
45
82
11
108
55
1
0
43
1.07
8668--8817
69
2.2
70
90
2
232
37
8
20
33
1.83
8733--9043
97
3.2
97
84
1
410
33
11
24
30
1.90
10045--10073
14
2.0
15
93
6
51
72
0
20
6
1.07
10777--10833
26
2.1
27
83
3
71
10
35
12
42
1.77
11388--11449
27
2.3
27
78
13
74
16
3
12
67
1.35
15264--15845
166
3.5
165
79
7
486
53
7
7
31
1.58
15440--15752
167
1.9
166
86
2
448
53
8
7
30
1.58
16810--17093
43
6.7
43
69
10
172
45
13
22
19
1.84
16798--17093
85
3.5
85
82
4
364
44
13
22
19
1.85
16798--17006
42
5.0
41
68
10
143
44
13
22
20
1.85
16780--17093
170
1.8
171
87
4
465
45
13
21
19
1.84
17162--17364
47
4.3
47
80
4
214
42
16
20
20
1.89
17163--17340
94
1.9
93
87
1
257
41
16
21
20
1.90
17162--17364
94
2.2
93
83
0
253
42
16
20
20
1.89
17334--17529
35
5.8
35
76
7
161
42
11
22
22
1.86
17443--17501
29
2.0
29
93
0
100
44
10
23
22
1.83

Tables:   1

The End!