Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1498
Parameters: 2 7 7 80 10 50 1000
Length:  33068

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
352--395
18
2.5
17
82
13
54
52
2
2
43
1.26
1068--1126
30
2.0
30
89
0
91
45
6
0
47
1.29
1514--1549
14
2.6
14
90
0
54
38
0
0
61
0.96
1885--1929
20
2.2
20
80
7
56
68
0
0
31
0.89
2408--2517
55
2.0
56
92
5
188
26
10
12
50
1.71
2884--2913
10
3.0
10
95
0
51
56
0
0
43
0.99
5555--5596
17
2.5
17
96
0
75
50
0
0
50
1.00
5555--5596
8
4.9
9
85
11
61
50
0
0
50
1.00
6325--6397
13
5.8
13
75
16
57
65
0
1
32
1.01
6324--6397
24
3.0
24
73
21
73
64
0
1
33
1.02
6474--6503
15
2.0
15
93
0
51
36
0
0
63
0.95
6810--6868
22
2.7
23
84
5
77
40
1
0
57
1.09
6815--6876
22
2.9
22
83
7
65
45
1
0
53
1.10
7549--7600
26
2.0
26
85
7
70
63
0
0
36
0.95
7685--7717
15
2.3
15
94
5
59
42
0
0
57
0.98
10106--10227
31
4.0
31
82
2
147
26
18
24
31
1.97
11601--11627
12
2.2
12
100
0
54
55
14
0
29
1.40
11755--11917
50
3.3
49
92
1
272
42
14
26
15
1.86
13521--13815
79
3.7
79
93
0
466
26
24
15
32
1.95
15258--15901
299
2.2
298
89
0
975
47
7
7
36
1.60
16061--16141
34
2.3
37
83
10
98
46
0
0
53
1.00
16560--16625
26
2.6
25
72
11
62
53
1
0
45
1.09
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23052--23180
52
2.5
52
93
0
222
29
17
17
35
1.93
23189--23213
13
1.9
13
100
0
50
36
16
16
32
1.90
23266--23349
19
4.7
19
74
16
81
40
19
9
30
1.83
23261--23328
32
2.1
32
91
0
109
38
19
8
33
1.82
28458--28532
20
3.8
20
78
7
89
40
13
13
33
1.83
28455--28532
40
2.0
39
87
2
111
39
14
12
33
1.84
31364--31392
15
1.9
15
100
0
58
27
27
31
13
1.94
31954--32185
76
3.0
76
76
9
229
28
25
11
34
1.91

Tables:   1

The End!