Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1499
Parameters: 2 7 7 80 10 50 1000
Length:  23693

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1381--1444
28
2.3
28
81
7
69
20
4
15
59
1.54
5491--5568
28
2.8
28
88
5
106
21
3
23
51
1.64
5549--5594
24
1.9
24
90
0
74
21
6
28
43
1.77
6260--6340
35
2.4
33
82
10
92
58
1
0
40
1.06
6439--6470
16
2.1
15
94
5
55
43
18
0
37
1.51
7905--7953
23
2.1
23
100
0
98
16
8
8
67
1.40
7899--7953
23
2.5
21
88
11
92
18
10
9
61
1.54
13863--13887
1
25.0
1
100
0
50
100
0
0
0
0.00
14412--14443
13
2.6
12
90
9
55
90
9
0
0
0.45
15496--16236
27
27.0
27
89
3
1081
23
33
14
29
1.94
16228--16728
32
15.7
32
93
1
819
30
35
18
15
1.92
17281--17337
19
2.9
19
82
5
69
33
12
14
40
1.83
18232--18284
23
2.5
20
83
16
79
18
11
9
60
1.57
18238--18284
23
2.0
23
100
0
94
17
8
8
65
1.44

Tables:   1

The End!