Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1508
Parameters: 2 7 7 80 10 50 1000
Length:  27796

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1729--1772
19
2.3
19
84
0
52
36
13
13
36
1.85
2657--2747
44
2.1
44
100
0
182
21
17
13
47
1.82
2657--2726
24
3.1
24
69
23
78
21
17
14
47
1.82
2671--2746
20
3.6
20
74
19
82
21
18
11
48
1.79
9769--9812
15
2.9
15
82
0
61
43
38
0
18
1.50
13569--13625
19
2.9
19
86
2
78
33
15
17
33
1.92
15266--15298
3
11.0
3
93
0
57
36
0
30
33
1.58
18966--19005
21
2.0
21
85
5
55
32
17
0
50
1.47
23516--23587
10
6.7
10
78
12
63
81
15
0
2
0.79
23502--23577
33
2.4
32
83
14
95
80
14
1
3
0.92
23498--23589
38
2.4
38
85
10
136
78
15
2
4
1.01
23823--23876
12
4.6
12
79
4
65
87
9
3
0
0.67
23822--23874
16
3.4
16
82
7
65
84
11
3
0
0.73
23822--23876
23
2.4
23
84
6
76
85
10
3
0
0.72
24837--24946
33
3.4
33
67
11
102
20
29
15
34
1.94
24813--24971
62
2.6
61
89
4
246
21
30
15
32
1.94
24823--25336
34
15.8
31
74
14
137
20
30
13
34
1.92
24947--25034
30
2.8
33
83
8
103
23
26
17
32
1.96
24962--25336
34
11.3
35
81
12
339
20
30
13
36
1.90
25010--25336
68
4.9
68
85
7
404
19
32
12
35
1.89
25010--25336
102
3.3
102
88
5
429
19
32
12
35
1.89
25112--25378
68
3.9
69
81
8
192
20
32
11
35
1.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25345--25638
32
9.3
32
85
8
372
30
33
18
18
1.94
25167--25388
69
3.3
68
79
10
179
22
31
11
35
1.90
25338--25638
97
3.2
94
85
7
405
29
33
17
18
1.94
25677--26815
43
25.1
43
79
12
1129
25
25
17
30
1.97
25626--26809
92
13.0
89
87
6
1148
25
26
17
30
1.97
25882--25949
21
3.2
21
63
19
50
25
26
16
32
1.96
26066--26133
21
3.2
21
62
25
52
25
29
17
27
1.97
26082--26152
24
3.2
24
61
19
62
23
28
19
28
1.99
26087--26155
22
3.2
22
62
25
56
23
28
17
30
1.97
26769--26914
50
2.9
52
80
7
183
22
24
19
33
1.97
27737--27761
13
1.9
13
100
0
50
36
16
16
32
1.90
27717--27785
32
2.1
33
94
2
122
34
11
17
36
1.86

Tables:   1

The End!