Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1512
Parameters: 2 7 7 80 10 50 1000
Length:  23241

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2470--2654
86
2.2
86
88
2
264
35
28
8
28
1.85
2604--2705
51
2.0
51
92
0
168
30
27
13
28
1.94
3512--3555
3
15.0
3
95
4
81
68
0
31
0
0.90
3859--3960
30
3.4
31
75
8
111
45
0
0
53
1.06
3939--3995
21
2.7
21
83
5
71
47
0
0
52
1.00
3973--4067
26
3.8
26
69
19
69
51
1
1
46
1.15
4042--4083
20
2.1
20
82
8
50
47
0
0
52
1.00
5840--5870
2
15.5
2
100
0
62
51
0
0
48
1.00
9488--9531
21
2.1
21
100
0
88
20
9
25
45
1.80
12123--12170
25
1.9
25
100
0
96
27
0
20
52
1.47
12441--12468
2
14.0
2
100
0
56
50
0
0
50
1.00
14112--14161
2
25.0
2
95
0
91
48
0
2
50
1.12
15945--15971
2
13.5
2
100
0
54
51
0
0
48
1.00
18635--18661
2
13.5
2
100
0
54
48
0
0
51
1.00
23105--23164
8
7.6
8
79
3
68
81
0
18
0
0.69

Tables:   1

The End!