Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1513
Parameters: 2 7 7 80 10 50 1000
Length:  32728

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
307--588
51
5.4
51
74
13
234
31
25
11
32
1.91
5438--5462
13
1.9
13
100
0
50
36
16
16
32
1.90
5526--5550
13
1.9
13
100
0
50
32
16
16
36
1.90
6067--6091
13
1.9
13
100
0
50
32
20
16
32
1.94
8650--8705
20
2.8
20
84
7
78
44
16
12
26
1.83
15449--15479
8
3.9
8
95
0
53
38
0
3
58
1.15
15438--15481
8
5.2
8
86
8
52
36
0
11
52
1.38
17222--17247
13
2.0
13
100
0
52
30
15
15
38
1.88
17934--17977
21
2.1
21
83
8
54
25
31
4
38
1.76
19784--19822
13
3.0
13
100
0
78
38
15
15
30
1.88
21893--21923
15
2.1
15
93
0
53
12
22
16
48
1.80
23727--23771
21
2.1
21
84
8
56
22
20
4
53
1.63
26061--26127
37
1.9
35
88
11
102
29
25
11
32
1.92
26585--26610
13
2.0
13
100
0
52
30
15
15
38
1.88
26649--26724
21
3.7
21
80
3
100
30
18
10
40
1.84
26669--26742
20
3.7
20
78
3
94
32
20
12
35
1.89
26649--26742
41
2.3
41
98
0
179
30
19
11
38
1.87
28520--28544
13
1.9
13
100
0
50
32
16
16
36
1.90
29988--30152
84
2.0
84
82
7
201
24
19
4
52
1.64
31681--31747
37
1.9
35
88
11
102
29
25
11
32
1.92
32203--32228
13
2.0
13
100
0
52
30
15
15
38
1.88
32184--32246
32
2.0
32
87
6
92
28
15
15
39
1.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32266--32341
20
3.7
20
77
10
82
30
18
11
39
1.87
32266--32359
42
2.3
42
94
3
165
30
19
12
37
1.89
32285--32359
21
3.7
20
75
7
87
32
20
13
34
1.91

Tables:   1

The End!