Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1516
Parameters: 2 7 7 80 10 50 1000
Length:  97767

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
883--943
24
2.5
23
82
10
77
57
1
8
32
1.38
949--997
17
2.6
18
78
15
55
57
0
2
40
1.10
1338--1399
24
2.4
25
78
7
63
43
0
0
56
0.99
1579--1611
2
16.5
2
100
0
66
0
48
0
51
1.00
15334--15370
14
2.6
15
83
8
51
56
0
5
37
1.22
17017--17344
180
1.8
183
81
2
419
23
20
28
27
1.99
26181--26644
240
2.0
232
87
4
669
25
12
21
40
1.88
28300--28343
22
2.0
22
83
16
56
13
13
4
68
1.36
31131--31183
22
2.4
22
87
6
72
64
1
0
33
1.05
31128--31186
22
2.6
23
81
13
68
62
1
0
35
1.05
31511--31569
23
2.6
23
89
2
84
35
0
0
64
0.94
31531--31590
29
2.0
29
87
3
84
35
0
0
65
0.93
31682--31717
18
2.0
18
94
0
63
36
11
11
41
1.76
32104--32135
2
16.0
2
93
0
55
0
50
3
46
1.17
34119--34162
22
2.0
22
100
0
88
31
9
18
40
1.81
43835--43878
2
22.0
2
90
0
70
45
0
2
52
1.13
44365--44429
27
2.5
26
76
11
69
56
1
7
33
1.37
44435--44491
22
2.5
23
80
5
71
59
1
0
38
1.08
44768--44815
23
2.2
21
82
14
53
47
6
2
43
1.40
45076--45100
2
12.5
2
100
0
50
0
48
0
52
1.00
45304--45328
3
8.3
3
100
0
50
32
0
0
68
0.90
57976--58003
14
2.0
14
100
0
56
21
14
14
50
1.78
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58567--59037
242
2.0
234
85
6
639
25
12
22
39
1.89
63780--63833
26
2.1
26
85
0
72
33
0
0
66
0.92
65295--65361
28
2.6
24
83
9
71
40
2
0
56
1.14
65869--65896
2
14.0
2
100
0
56
0
50
0
50
1.00
71967--72017
26
2.0
26
100
0
102
47
3
9
39
1.55
74609--75376
382
2.0
382
96
0
1410
19
24
14
40
1.90
76630--76673
22
2.0
22
100
0
88
13
36
0
50
1.42
77953--78017
27
2.5
26
76
11
69
56
0
7
35
1.28
78023--78079
22
2.5
23
80
5
71
59
1
0
38
1.08
78362--78410
23
2.2
22
82
10
55
48
6
2
42
1.39
78407--78470
30
2.1
30
85
0
83
34
3
1
60
1.22
78437--78488
25
2.2
23
82
6
59
42
0
0
57
0.98
87818--88145
180
1.8
181
83
2
442
24
21
27
26
1.99
95300--95335
2
18.0
2
100
0
72
50
0
0
50
1.00
96016--96044
14
2.1
14
100
0
58
20
13
13
51
1.75

Tables:   1

The End!