Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1522
Parameters: 2 7 7 80 10 50 1000
Length:  32840

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5741--5802
32
1.9
32
96
0
115
22
16
6
54
1.64
6597--6650
20
2.6
21
85
2
65
42
11
14
31
1.81
6694--6773
42
1.9
42
86
0
115
38
12
10
38
1.77
6695--6773
20
3.8
20
80
11
88
37
12
10
39
1.77
13095--13133
19
2.2
17
86
9
51
51
17
2
28
1.59
15334--15361
14
2.0
14
100
0
56
35
21
14
28
1.92
15740--15966
108
2.2
103
82
5
258
37
12
10
39
1.77
15842--16043
103
2.0
103
82
9
252
38
12
10
38
1.77
16165--16815
107
6.1
105
83
6
670
37
14
9
38
1.78
16165--16815
213
3.1
211
82
4
711
37
14
9
38
1.78
17066--17137
31
2.3
31
97
0
135
36
18
12
33
1.88
20938--21088
75
2.0
75
97
0
284
43
8
13
33
1.75
29174--29221
20
2.4
20
85
0
69
35
10
18
35
1.85
30739--30790
20
2.5
21
81
12
63
38
9
19
32
1.84
31407--31431
13
1.9
13
100
0
50
36
16
16
32
1.90
31495--31519
13
1.9
13
100
0
50
32
16
16
36
1.90
31528--31708
52
3.5
52
98
0
344
34
19
17
28
1.95

Tables:   1

The End!