Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1525
Parameters: 2 7 7 80 10 50 1000
Length:  28013

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
273--493
47
4.8
46
80
15
235
30
18
23
27
1.97
264--488
92
2.4
92
85
10
289
31
17
24
27
1.97
488--600
27
3.9
29
80
12
117
17
17
33
30
1.94
495--690
29
7.0
28
80
11
188
19
18
28
33
1.95
531--694
28
5.9
28
81
10
185
20
18
26
35
1.95
495--749
86
3.0
84
81
12
243
21
18
28
31
1.97
529--663
57
2.4
55
85
9
177
17
19
28
35
1.94
531--749
84
2.5
84
81
13
232
21
19
26
33
1.97
825--961
29
4.7
28
75
11
105
23
20
27
28
1.99
2399--2480
7
11.6
7
77
18
73
1
2
10
85
0.75
2407--2479
38
1.9
37
88
2
110
1
2
10
84
0.78
2412--2473
32
1.9
33
90
9
101
1
3
11
83
0.82
2399--2479
16
4.9
16
80
4
90
1
2
11
85
0.76
2449--2489
17
2.4
17
87
0
55
2
2
4
90
0.61
2399--2480
1
82.0
1
72
0
56
1
2
10
85
0.75
12178--12204
10
2.7
10
100
0
54
77
22
0
0
0.76
20065--20185
52
2.3
52
97
0
224
28
18
18
34
1.94
20065--20205
52
2.7
51
90
4
212
30
17
18
33
1.94
20194--20218
13
1.9
13
100
0
50
36
16
16
32
1.90
20283--20307
13
1.9
13
100
0
50
32
16
16
36
1.90
20261--20327
33
2.0
33
88
0
98
40
13
11
34
1.81
27604--27676
20
3.7
19
83
7
76
36
16
17
28
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
27604--27657
19
2.8
20
85
2
74
35
16
18
29
1.93

Tables:   1

The End!