Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1526
Parameters: 2 7 7 80 10 50 1000
Length:  39871

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3487--3536
21
2.4
21
83
9
59
26
22
10
42
1.84
4950--5003
19
3.0
19
75
17
53
48
0
5
46
1.25
4960--5005
20
2.3
21
78
17
53
43
0
6
50
1.28
4998--5131
49
2.7
49
96
0
250
32
10
8
49
1.67
7442--7513
18
3.8
19
77
15
62
56
0
0
43
0.99
7461--7518
20
3.1
19
83
9
75
58
0
0
41
0.98
8477--8502
13
2.0
13
100
0
52
38
15
15
30
1.88
8455--8522
33
2.1
32
88
2
100
33
13
19
33
1.90
11086--11122
13
2.8
13
91
0
56
40
18
10
29
1.85
17010--17195
73
2.5
73
98
0
354
32
14
18
34
1.91
17177--17202
13
2.0
13
100
0
52
38
15
15
30
1.88
17155--17222
33
2.1
32
88
2
100
33
13
19
33
1.90
18697--18823
65
2.0
65
85
0
173
39
16
9
34
1.81
19744--19795
20
2.5
20
84
3
68
55
0
3
40
1.18
20947--20992
17
2.6
18
82
6
58
50
0
4
45
1.21
21058--21184
65
2.0
65
87
0
182
40
21
9
29
1.84
22130--22176
20
2.4
19
86
6
67
61
0
0
38
0.96
22126--22192
27
2.5
27
78
9
66
58
0
1
40
1.07
23168--23308
70
2.0
70
94
0
246
36
18
20
24
1.95
24553--24606
18
2.9
18
89
8
74
55
0
0
44
0.99
25892--25955
20
3.7
16
74
25
51
53
0
0
46
1.00
25912--25956
20
2.3
20
92
3
74
57
0
0
42
0.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
27007--27039
15
2.1
16
94
5
59
6
15
0
78
0.93
26998--27049
26
2.0
25
85
10
70
5
13
0
80
0.88
27084--27127
21
2.2
20
87
4
61
61
4
0
34
1.16
28403--28446
19
2.3
18
81
11
52
61
15
2
20
1.45
29662--29697
17
2.1
18
94
5
65
63
0
2
33
1.08
30908--30937
2
15.0
2
100
0
60
0
50
0
50
1.00
34478--34502
4
6.2
4
100
0
50
24
0
0
76
0.80
34662--34704
22
2.0
22
90
0
68
51
2
6
39
1.42
38056--38081
13
2.0
13
100
0
52
38
15
15
30
1.88
38038--38101
32
2.0
33
87
3
94
40
17
14
28
1.88

Tables:   1

The End!