Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1527
Parameters: 2 7 7 80 10 50 1000
Length:  16955

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
527--581
27
2.0
29
82
7
69
47
12
5
34
1.65
1443--1663
34
6.5
33
84
5
280
40
25
7
25
1.82
1443--1663
102
2.2
101
88
1
343
40
25
7
25
1.82
6069--6287
34
6.5
33
81
9
253
40
26
7
25
1.82
6071--6287
68
3.2
67
84
3
283
40
26
7
25
1.82
6069--6287
102
2.2
101
88
1
339
40
26
7
25
1.82
6614--7237
223
2.8
223
95
1
1114
39
9
10
40
1.72
7652--7716
28
2.5
26
80
14
71
52
3
3
41
1.32
7697--7744
17
2.5
19
83
12
55
60
0
4
35
1.16
8723--8927
80
2.6
79
82
2
223
29
17
29
23
1.97
8882--8953
28
2.6
28
86
0
90
25
19
33
22
1.97
8803--9007
107
1.9
108
81
3
252
29
16
27
25
1.97
8941--9107
52
3.2
49
77
6
154
34
10
24
31
1.89
9095--9168
27
2.7
27
87
10
98
21
20
33
24
1.97
8831--9274
211
2.1
210
86
4
617
31
13
26
28
1.94
9152--9274
51
2.3
53
86
6
162
31
12
24
31
1.92
11634--11659
13
2.0
13
100
0
52
38
15
15
30
1.88
11613--11679
33
2.0
33
88
0
98
43
14
14
26
1.85
11699--11766
19
3.9
18
76
23
83
38
14
11
35
1.83
11721--11745
13
1.9
13
100
0
50
32
16
16
36
1.90
11702--11764
32
2.0
32
96
0
117
36
15
12
34
1.86
12448--14040
55
29.0
55
90
3
2432
20
20
30
28
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12852--12934
26
3.1
26
65
19
62
14
19
32
33
1.92
15024--15072
9
5.6
9
82
7
57
0
6
6
87
0.66
15025--15074
13
3.8
13
78
10
57
0
6
6
88
0.65
15015--15070
26
2.2
26
83
6
69
0
10
5
83
0.78
15030--15075
12
3.8
12
81
16
58
0
6
6
86
0.69
15009--15074
14
4.5
15
74
14
57
0
10
4
84
0.75
15025--15073
25
1.9
26
91
4
82
0
6
6
87
0.66
15025--15074
26
1.9
26
92
8
84
0
6
6
88
0.65

Tables:   1

The End!