Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1542
Parameters: 2 7 7 80 10 50 1000
Length:  29048

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7144--7169
13
2.0
13
100
0
52
30
15
15
38
1.88
19184--19255
28
2.6
28
84
0
81
22
20
34
22
1.97
19266--19412
51
2.8
51
85
2
186
31
12
28
27
1.93
19344--19523
80
2.3
80
86
4
249
28
15
30
26
1.96
19476--19552
27
2.8
26
92
5
118
22
19
35
23
1.96
19534--19651
51
2.4
49
82
13
145
33
11
24
30
1.91
21936--21961
13
2.0
13
100
0
52
38
15
15
30
1.88
21915--21981
33
2.0
33
88
0
98
43
16
14
25
1.86
22001--22066
19
3.8
18
75
24
79
36
15
12
36
1.84
22023--22047
13
1.9
13
100
0
50
32
16
16
36
1.90
22004--22068
32
2.0
32
96
0
121
35
15
12
36
1.85
22748--23462
55
12.4
54
85
7
716
25
19
27
27
1.99
22748--23465
110
6.2
111
83
11
801
25
19
27
27
1.99
22974--23465
59
8.3
62
88
7
579
26
19
27
26
1.99

Tables:   1

The End!