Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1549
Parameters: 2 7 7 80 10 50 1000
Length:  16941

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1644--1689
22
2.1
22
83
0
56
84
13
2
0
0.71
1649--1702
23
2.3
23
81
6
65
79
14
3
1
0.95
1645--1678
13
2.6
13
85
0
50
88
11
0
0
0.52
1645--1678
14
2.5
13
86
9
50
88
11
0
0
0.52
1650--1701
22
2.3
22
86
3
68
78
15
3
1
0.98
2906--3567
28
23.6
28
82
7
735
29
30
16
23
1.96
5716--5839
49
2.6
46
77
12
124
32
15
28
24
1.95
5824--5894
27
2.5
28
84
6
90
22
19
35
22
1.96
8334--8406
20
3.7
20
88
5
103
47
12
15
24
1.79
8430--8481
13
3.5
13
73
26
50
36
17
13
32
1.89
8438--8523
19
4.7
19
72
20
76
37
16
12
33
1.87
8430--8502
32
2.3
32
97
0
137
35
17
12
34
1.88
11801--11988
79
2.4
79
84
0
234
35
13
22
28
1.92
12128--12199
28
2.6
28
86
2
101
25
18
31
25
1.97
12028--12249
105
2.1
102
80
8
234
30
14
27
27
1.95
14611--14639
15
1.9
15
100
0
58
44
13
13
27
1.82
16694--16732
21
1.9
21
89
5
62
58
0
2
38
1.12

Tables:   1

The End!