Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: Scaffold1555
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 351839
ACGTcount: A:0.31, C:0.19, G:0.17, T:0.34
File 2 of 3
Found at i:111397 original size:680 final size:680
Alignment explanation
Indices: 110133--111398 Score: 1812
Period size: 680 Copynumber: 1.9 Consensus size: 680
110123 ATTTTTCTTA
* * * *
110133 AAATCAAAGTTTGCACTTTAAATAGGACATGCATTGATTTTCGTAACAGTCTCCATTCTTTTCAA
1 AAATCAAAGTTTGCACTTTAAATAGGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAA
* * **
110198 CATTGGGAGCCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAG
66 CATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTCATGCTTCAGTGTCGCAAG
* ** *
110263 AGAAGCTGTTCTCCCCACCGTCATTGATTGAATCAAAGTTTGTCTCTTAAATAAGATAAACATGA
131 AGAAGCTGTTCTCCCCAACGTCATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGA
* * * **
110328 ATAGTCATACTAATCCGCTTTCTTTTCTGATTAGGCACCATAAACATAGTCTTCTCATAAGGATA
196 ATACTCATACTAATCCACTTTCTTTTCGGATTAACCACCATAAACATAGTCTTCTCATAAGGATA
* * * *
110393 CATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTTCTTCCCACCAATTTTTGAAAAGCATAAG
261 CATGATATCGATCCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTAGAAAAGCATAAG
** * * *
110458 TTCATTCCTCAAATTAGACAAACAAGGATTCTAGTAAGGATCTTCATTCATTTCGTGGTTAGGCA
326 TTCACGCCTCAAATGAGACAAACAAGGATTCTAGTAAGGATCATCATTCATTTCGTGATTAGGCA
* * * *
110523 TTACAAACACATTCTCCCCAATAGGATAAATGATATTGACGGTTTTCTTTTGCTTGGAAATTTTT
391 CTACAAACACATTCTCCCCAATAGGATAAATGATATTGACGGTTTTCTTTTGCATGAAAATCTTT
* * * *
110588 TCTTTGTCTTATTTTTCTTAAAATCAAAGTTTGTACTTTAAATAAGACATGCATTAATTCTCGTA
456 TCTTTGTCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATAAGACAAGCATTAATTCGCGTA
* * *
110653 AAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCTTTCATTAGGATATATGACAT
521 AAAGTCTCCATTCTTTTCAAGATTGGAAACCAAAAACACATTCCCTTCATTAGGATACATGACAT
110718 TAATTAGGCATTATAAACACATTCTTCTCCTAAGCAAGCATGATATTGATGGTTTTTTTTTGCAT
586 TAATTAGGCATTATAAACACATTCTTCTCCTAAGCAAGCATGATATTGATGGTTTTTTTTTGCAT
110783 GAAAATCTTTTCTTTGCCTCACTTTCCTTC
651 GAAAATCTTTTCTTTGCCTCACTTTCCTTC
*
110813 AAATCAAAGTTTGTACTTTAAAT-GAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCA
1 AAATCAAAGTTTGCACTTTAAATAG-GACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCA
* * *
110877 AGATTGGTAACCAAAAACACATTCTCTTCATTAGGATACATGACATTCATGCTTCAGTGTCGCAA
65 ACATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTCATGCTTCAGTGTCGCAA
* ** * *
110942 GAGAAGCT-TT-TCCTTCTAACGTTGTTGATAAAATCAAAGTTTGTCTCTTAAATAAGGCAAACT
130 GAGAAGCTGTTCTCC--CCAACGTCATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACA
* * *
111005 TGAATACTCATACTAATCCACATTT-TTTTCAGGGTTAACCACCATAAACATAGTCTTTTTATAA
193 TGAATACTCATACTAATCCAC-TTTCTTTTC-GGATTAACCACCATAAACATAGTCTTCTCATAA
* * **
111069 GGATACATGGTATTGATCCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTAGTAAATT
256 GGATACATGATATCGATCCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTAG-AAAAG
* * * * *
111134 C-TAAGTTCGCGCCTCAAATGAGACAAACATGGATTCTAGTAGGGGTCATCATTCATTTTGTGAT
320 CATAAGTTCACGCCTCAAATGAGACAAACAAGGATTCTAGTAAGGATCATCATTCATTTCGTGAT
* * * * *
111198 TAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTTCATGAAA
385 TAGGCACTACAAACACATTCTCCCCAATAGGATAAATGATATTGACGGTTTTCTTTTGCATGAAA
*
111263 ATCTTTTCTTTG-CATTA-TTTCCATAAAATCAAAGTTTGTACTTTAAATGAA-ACAAGCATTGA
450 ATCTTTTCTTTGTC-TTATTTTCCATAAAATCAAAGTTTGTACTTTAAAT-AAGACAAGCATTAA
111325 TTCGCGTAAAAGTCTCCATT-TTTTCCAAGATTGGAAACCAAAAACACATTCCCTTCATTAGGAT
513 TTCGCGTAAAAGTCTCCATTCTTTT-CAAGATTGGAAACCAAAAACACATTCCCTTCATTAGGAT
111389 ACATGACATT
577 ACATGACATT
111399 GATGCTTTGG
Statistics
Matches: 513, Mismatches: 64, Indels: 18
0.86 0.11 0.03
Matches are distributed among these distances:
678 3 0.01
679 7 0.01
680 290 0.57
681 209 0.41
682 4 0.01
ACGTcount: A:0.31, C:0.19, G:0.14, T:0.36
Consensus pattern (680 bp):
AAATCAAAGTTTGCACTTTAAATAGGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAA
CATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTCATGCTTCAGTGTCGCAAG
AGAAGCTGTTCTCCCCAACGTCATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGA
ATACTCATACTAATCCACTTTCTTTTCGGATTAACCACCATAAACATAGTCTTCTCATAAGGATA
CATGATATCGATCCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTAGAAAAGCATAAG
TTCACGCCTCAAATGAGACAAACAAGGATTCTAGTAAGGATCATCATTCATTTCGTGATTAGGCA
CTACAAACACATTCTCCCCAATAGGATAAATGATATTGACGGTTTTCTTTTGCATGAAAATCTTT
TCTTTGTCTTATTTTCCATAAAATCAAAGTTTGTACTTTAAATAAGACAAGCATTAATTCGCGTA
AAAGTCTCCATTCTTTTCAAGATTGGAAACCAAAAACACATTCCCTTCATTAGGATACATGACAT
TAATTAGGCATTATAAACACATTCTTCTCCTAAGCAAGCATGATATTGATGGTTTTTTTTTGCAT
GAAAATCTTTTCTTTGCCTCACTTTCCTTC
Found at i:111456 original size:158 final size:157
Alignment explanation
Indices: 110813--111468 Score: 394
Period size: 158 Copynumber: 4.1 Consensus size: 157
110803 ACTTTCCTTC
* * *
110813 AAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAA
1 AAATCAAAGTTTGT-CTTTAAATGAAACAAACATTGATTCTCGTAAAAGTCTCCATTTTTTCCAA
* * * **
110878 GATTGGTAACCAAAAACACATTCTCTTCATTAGGATACATGACATTCATGCTTCAGTGTCGCAAG
65 GATTGGAAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAG
* * *
110943 AGAAGCTTTTCCTTCTAACGTTGTTGATA
130 AGAAGCTTTTCTTTCTTACATT-TTGATA
* * * *
110972 AAATCAAAGTTTGTCTCTTAAAT-AAGGCAAAC-TTGAATACTCATACTAA-TC-CACATTTTTT
1 AAATCAAAGTTTGTCT-TTAAATGAA-ACAAACATTG-ATTCTCGTA-AAAGTCTC-CATTTTTT
* * * * * * ** * * ** * *
111033 TCAGGGTT--AACCACCATAAACATAGTCTTTTTATAAGGATACATGGTATTGATCCTTTGGTTT
61 CCAAGATTGGAA--ACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGT
* **
111096 CGCAAGA-AA-CACTTTC-TTCCCACCAATTTT-AGTA
124 CGCAAGAGAAGC-TTTTCTTTCTTA-C-ATTTTGA-TA
* * * * * * * * * ***
111130 AATTCTAAGTTCGCGCCTCAAATGAGACAAACATGGATTCTAGTAGGGGTCAT-CATTCATTTT-
1 AAATCAAAGTTTG-TCTTTAAATGAAACAAACATTGATTCTCGTAAAAGTC-TCCATT--TTTTC
** * * * * * * ** * *
111193 -GTGATTAGG-CACTATAAACACATTCTCC-TCATTAGGATAAATGATATTGATGGTTTTCTTTT
62 CAAGATT-GGAAACCAAAAACACATTC-CCTTCATTAGGATACATGACATTGATGCTTTGGTGTC
* * * * **
111255 TCATGAAAATCTTTTCTTTGCATT--ATTTCCATA
125 GCAAGAGAAGCTTTTCTTT-C-TTACATTTTGATA
* *
111288 AAATCAAAGTTTGTACTTTAAATGAAACAAGCATTGATTCGCGTAAAAGTCTCCATTTTTTCCAA
1 AAATCAAAGTTTGT-CTTTAAATGAAACAAACATTGATTCTCGTAAAAGTCTCCATTTTTTCCAA
111353 GATTGGAAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAG
65 GATTGGAAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAG
111418 AGAAGCTTTTCTTTCTTACATTGTTGATA
130 AGAAGCTTTTCTTTCTTACATT-TTGATA
111447 AAATC-AAGTTTGTCTCTTAAAT
1 AAATCAAAGTTTGTCT-TTAAAT
111469 AAGGCAAACT
Statistics
Matches: 359, Mismatches: 99, Indels: 79
0.67 0.18 0.15
Matches are distributed among these distances:
156 6 0.02
157 15 0.04
158 216 0.60
159 112 0.31
160 9 0.03
161 1 0.00
ACGTcount: A:0.32, C:0.18, G:0.14, T:0.36
Consensus pattern (157 bp):
AAATCAAAGTTTGTCTTTAAATGAAACAAACATTGATTCTCGTAAAAGTCTCCATTTTTTCCAAG
ATTGGAAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGA
GAAGCTTTTCTTTCTTACATTTTGATA
Found at i:111809 original size:474 final size:476
Alignment explanation
Indices: 110720--111875 Score: 1715
Period size: 474 Copynumber: 2.4 Consensus size: 476
110710 TATGACATTA
* * * *
110720 ATTAGGCATTATAAACACATTCTTCTCCTAAGCAAGCATGATATTGATGGTTTTTTTTTGCATGA
1 ATTAGGCACTATAAACACATTCTTCTCCTAAGGATGCATGATATTGATGGTTTTCTTTTGCATGA
*
110785 AAATCTTTTCTTTGCCTCACTTTCCTTCAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGA
66 AAATCTTTTCTTTGCCTCACTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGA
* *
110850 TTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGTAACCAAAAACACATTCTCTTCATTAGGATA
131 TTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGAAACCAAAAACACATTCCCTTCATTAGGATA
* *
110915 CATGACATTCATGCTTCAGTGTCGCAAGAGAAGCTTTTCCTTCTAACGTTGTTGATAAAATCAAA
196 CATGACATTGATGCTTCAGTGTCGCAAGAGAAGCTTTTCCTTCTAACATTGTTGATAAAATCAAA
* * *
110980 GTTTGTCTCTTAAATAAGGCAAACTTGAATACTCATACTAATCCACATTTTTTTCAGGGTTAACC
261 GTTTGTCTCTTAAATAAGGCAAACTTGAATACTCATACTAATCCACATTCTTTTCAAGATTAACC
* * * * * *
111045 ACCATAAACATAGTCTTTTTATAAGGATACATGGTATTGATCCTTTGGTTTCGCAAGAAACACTT
326 ACCATAAACATAGTCTTCTGATAAGGATACAAGATATTGATCATTTGGTTTCACAAGAAACACTT
111110 TCTTCCCACCAATTTTAGTAAATTCTAAGTTCGCGCCTCAAATGAGACAAACATGGATTCTAGTA
391 TCTTCCCACCAATTTTAGTAAATTCTAAGTTCGCGCCTCAAATGAGACAAACATGGATTCTAGTA
* *
111175 GGGGTCATCATTCATTTTGTG
456 AGGATCATCATTCATTTTGTG
* * * ** *
111196 ATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTTCATGA
1 ATTAGGCACTATAAACACATTCTTCTCCTAAGGATGCATGATATTGATGGTTTTCTTTTGCATGA
* * * *
111261 AAATCTTTTCTTTGCATTA-TTTCCATAAAATCAAAGTTTGTACTTTAAATGAAACAAGCATTGA
66 AAATCTTTTCTTTGCCTCACTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGA
* *
111325 TTCGCGTAAAAGTCTCCATTTTTTCCAAGATTGGAAACCAAAAACACATTCCCTTCATTAGGATA
131 TTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGAAACCAAAAACACATTCCCTTCATTAGGATA
** * *
111390 CATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCTTACATTGTTGATAAAATC-AA
196 CATGACATTGATGCTTCAGTGTCGCAAGAGAAGCTTTTCCTTCTAACATTGTTGATAAAATCAAA
* * *
111454 GTTTGTCTCTTAAATAAGGCAAACTTGAGTACTCATACTAATCCCCATTCTTTTCAAGATTAGCC
261 GTTTGTCTCTTAAATAAGGCAAACTTGAATACTCATACTAATCCACATTCTTTTCAAGATTAACC
* * * * * **
111519 ACCATAAACATAGTCTTCTGATACGGATACAAGATTTTGATGATTTGGTTTCACTAGGAATGCTT
326 ACCATAAACATAGTCTTCTGATAAGGATACAAGATATTGATCATTTGGTTTCACAAGAAACACTT
* * * * * * *
111584 TTTTCCCA-TAATTTTTGTAGATTCTATGTTCGTGCCTCAAATGAGATAAACATGGATTCTAGTA
391 TCTTCCCACCAATTTTAGTAAATTCTAAGTTCGCGCCTCAAATGAGACAAACATGGATTCTAGTA
111648 AGGATCATCATTCATTTTGTG
456 AGGATCATCATTCATTTTGTG
* *
111669 ATTAGGCACTATAAACACATTCTTCTCCTCAGGATGCATGATATTGATGGTTTTCTTTTGCATGG
1 ATTAGGCACTATAAACACATTCTTCTCCTAAGGATGCATGATATTGATGGTTTTCTTTTGCATGA
* *
111734 AAATCTTTTCTTTGCCTCACTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGAGATGCATTGA
66 AAATCTTTTCTTTGCCTCACTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGA
* * * * *
111799 TTCTCGTAAAAGTCTCCATTCTTTCTAACATTGGGAACCAATAACACATTCCCTTTATTAGGATA
131 TTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGAAACCAAAAACACATTCCCTTCATTAGGATA
* *
111864 CAAGACGTTGAT
196 CATGACATTGAT
111876 AGAATCAAAG
Statistics
Matches: 604, Mismatches: 75, Indels: 4
0.88 0.11 0.01
Matches are distributed among these distances:
473 144 0.24
474 229 0.38
475 159 0.26
476 72 0.12
ACGTcount: A:0.30, C:0.19, G:0.14, T:0.37
Consensus pattern (476 bp):
ATTAGGCACTATAAACACATTCTTCTCCTAAGGATGCATGATATTGATGGTTTTCTTTTGCATGA
AAATCTTTTCTTTGCCTCACTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGA
TTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGAAACCAAAAACACATTCCCTTCATTAGGATA
CATGACATTGATGCTTCAGTGTCGCAAGAGAAGCTTTTCCTTCTAACATTGTTGATAAAATCAAA
GTTTGTCTCTTAAATAAGGCAAACTTGAATACTCATACTAATCCACATTCTTTTCAAGATTAACC
ACCATAAACATAGTCTTCTGATAAGGATACAAGATATTGATCATTTGGTTTCACAAGAAACACTT
TCTTCCCACCAATTTTAGTAAATTCTAAGTTCGCGCCTCAAATGAGACAAACATGGATTCTAGTA
AGGATCATCATTCATTTTGTG
Found at i:112267 original size:432 final size:430
Alignment explanation
Indices: 111440--112307 Score: 1136
Period size: 432 Copynumber: 2.0 Consensus size: 430
111430 TTCTTACATT
* * * * * *
111440 GTTGATAAAATCAAGTTTGTCTCTTAAATAAGGCAAACTTGAGTACTCATACTAATCCCCATTCT
1 GTTGATAAAATCAAGTTTATCTCTTAAATAAGACAAACATGAATACTCACACTAATCCACATTCT
* * * * *
111505 TTTCAAGATTAGCCACCATAAACATAGTCTTCTGATACGGATACAAGATTTTGATGATTTGGTTT
66 TTTCAAGATTAGCCACCATAAACAAAGTCTTCTAATAAGGATACAAGATATTGATGATTTCGTTT
* * ** ** * *
111570 CACTAGGAATGCTTTTTTCCCATAATTTTTGTAGATTCTATGTTCGTGCCTCAAATGAGATAAAC
131 CACAAGAAACACTTTCATCCCATAATTTTTGTAGATTCAATGTTCGTGCCCCAAATGAGATAAAC
* ** *
111635 ATGGATTCTAGTAAGGATCATCATTCATTTTGTGATTAGGCACTATAAACACATTCTTCTCCTCA
196 AAGGATTCTAGTAAGGATCATCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCCTCA
** * * *
111700 GGATGCATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTCACTTTCCTTAAAA
261 GGATAAACGATATTAATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTCACTTTCCTAAAAA
* * **
111765 TCAAAGTTTGTACTTTAAATGAGAGATGCATTGATTCTCGTAAAAGTCTCCATTCTTTCTAACAT
326 TCAAAGTTTGTACTTTAAAAGAGACATGCATTGATTCTCACAAAAGTCTCCATTCTTTCTAACAT
*
111830 TGGGAACCAATAACACATTCCCTTT-ATTAGGATACAAGAC
391 TGGGAACCAAAAACACATT-CCTTTCATTAGGATACAAGAC
*
111870 GTTGATAGAATCAAAGTTTATCTCTTAAATAAGACAAACATGAATACTCACACTAATCCACATTC
1 GTTGATAAAATC-AAGTTTATCTCTTAAATAAGACAAACATGAATACTCACACTAATCCACATTC
** * * * * * *
111935 TTTTCTGGATTAGGCACCGTAAACAAATTCTTCTAATAAGGATATATGATATTGATGCTTTCGTT
65 TTTTCAAGATTAGCCACCATAAACAAAGTCTTCTAATAAGGATACAAGATATTGATGATTTCGTT
*
112000 TCGCAAGAAACACTTTCATCCCACTAATTTTTTGTTA-ATTCAAAT-TTCGTGCCCCAAATGAGA
130 TCACAAGAAACACTTTCATCCCA-TAA-TTTTTG-TAGATTC-AATGTTCGTGCCCCAAATGAGA
* * *
112063 TAAGCAAGGATTCTAGTAAGGATCTTTATTCATTTCATGATTAGGCACTATAAACACATTCTCCT
191 TAAACAAGGATTCTAGTAAGGATCATCATTCATTTCATGATTAGGCACTATAAACACATTCTCCT
* * * *
112128 CATTC-GGATAAACGATATTAATGGTTTT-TTTTGCGTGGAAATCTTTTCTTTGCCTTATTTTCC
256 C-CTCAGGATAAACGATATTAATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTCACTTTCC
*
112191 TAAAAATCAAAGTTTGTACTTTAAAAGAGACATGCGTTGATTCTCACAAAAGTCTCCATTCTTT-
320 TAAAAATCAAAGTTTGTACTTTAAAAGAGACATGCATTGATTCTCACAAAAGTCTCCATTCTTTC
* *
112255 TCAAGATTGGGAACCAAAAACACATTCCTTTCATTAGGATACATGAC
385 T-AACATTGGGAACCAAAAACACATTCCTTTCATTAGGATACAAGAC
*
112302 ATTGAT
1 GTTGAT
112308 GCTTTGGTGT
Statistics
Matches: 376, Mismatches: 54, Indels: 14
0.85 0.12 0.03
Matches are distributed among these distances:
430 11 0.03
431 120 0.32
432 134 0.36
433 105 0.28
434 6 0.02
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.36
Consensus pattern (430 bp):
GTTGATAAAATCAAGTTTATCTCTTAAATAAGACAAACATGAATACTCACACTAATCCACATTCT
TTTCAAGATTAGCCACCATAAACAAAGTCTTCTAATAAGGATACAAGATATTGATGATTTCGTTT
CACAAGAAACACTTTCATCCCATAATTTTTGTAGATTCAATGTTCGTGCCCCAAATGAGATAAAC
AAGGATTCTAGTAAGGATCATCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCCTCA
GGATAAACGATATTAATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTCACTTTCCTAAAAA
TCAAAGTTTGTACTTTAAAAGAGACATGCATTGATTCTCACAAAAGTCTCCATTCTTTCTAACAT
TGGGAACCAAAAACACATTCCTTTCATTAGGATACAAGAC
Found at i:112780 original size:474 final size:467
Alignment explanation
Indices: 111870--113221 Score: 1668
Period size: 474 Copynumber: 2.8 Consensus size: 467
111860 GATACAAGAC
* * *
111870 GTTGATAGAATCAAAGTTTATCTCTTAAATAAGACAAACATGAATACTCACACTAATCCACATTC
1 GTTGATAGAATCAAAG-TTGTCTCTTAAATAAGACAAACGTGAATACTCATACTAATCC-CATTC
** * * * * * *
111935 TTTTCTGGATTAGGCACCGTAAACAAATTCTTCTAATAAGGATATATGATATTGATGCTTTCGTT
64 TTTTAAGGATTAGGCACCATAAACATAGTCTT-TTATAAGGATACATGATATTGATGCTTTGGTT
* * * * * *
112000 TCGCAAGAAACACTTTCATCCCACTAATTTTTTGTTAATTCAAATTTCGTGCCCCAAATGAGATA
128 TCACAAGAAACGCTTTCTTCCCACTAA-TTTTTGTAAATT---ATTTC-TG-CTCAAATGAGACA
* * * *
112065 AGCAAGGATTCTAGTAAGGATCTTTATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCA
187 AACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCA
* * * * *
112130 TTCGGATAAACGATATTAATG-GTTTTTTTTGCGTGGAAATCTTTTCTTTGCCTTATTTTCCTAA
252 TTAGGATAAATGATATTAATGTG-TTTTTTTGCATGGAAATCTTTTCTTTGACTTATTTTCCTTA
* * * **
112194 AAATCAAAGTTTGTACTTTAAAAGAGACATGCGTTGATTCTCACAAAAGTCTCCATTCTTTTCAA
316 AAATCAAAGTTTGTCCTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAA
* * *
112259 GATTGGGAACCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAG
381 GATTGGGAACCAAAAACACATACCCTTCATTAGGATACATGACATTGAGGCTTTGGTGTCGCAAG
* *
112324 AGAAGCTTTTCTTTCCACCGTT
446 AGAAGCTTTTCTTCCCAACGTT
112346 GTTGATAGAATCAAAGTTGTCTCTTAAATAAGACAAACGTGAATACTCATACTAATCCTCATTCT
1 GTTGATAGAATCAAAGTTGTCTCTTAAATAAGACAAACGTGAATACTCATACTAATCC-CATTCT
* *
112411 TTTAAGGATTAGGCACCATAAACATAGTCTTTTCATAAGAATACATGATCTTGATGCTTTGGTTT
65 TTTAAGGATTAGGCACCATAAACATAGTCTTTT-ATAAGGATACATGATATTGATGCTTTGGTTT
* * * *
112476 CACAGGATACGCTTTCTTCTCACCAATTTTTGTAAAGTATGAGTTTACTGCTCAAATGAGACAAA
129 CACAAGAAACGCTTTCTTCCCACTAATTTTTGTAAA-T-T-A-TTT-CTGCTCAAATGAGACAAA
* * * *
112541 CATGGATTCTTGTAGGGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCTTT
189 CATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATT
* * * *
112606 AGGATAAATGATATTTATGTGTTTTTTTGCCTGGAAATCTTTTCTTTGTCATATTTTCCTTAAAA
254 AGGATAAATGATATTAATGTGTTTTTTTGCATGGAAATCTTTTCTTTGACTTATTTTCCTTAAAA
* *
112671 TCAAAGTTTGTCCTTTAAATGAGACATGCATTGATTCTTGTAAAAGTCTCCATTCTTTTCAACAT
319 TCAAAGTTTGTCCTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGAT
* * *
112736 TGGGAACCAAAAACACATACCCTTCATTGGGATACGTTACATTGAGGCTTTGGTGTCGCAAGAGA
384 TGGGAACCAAAAACACATACCCTTCATTAGGATACATGACATTGAGGCTTTGGTGTCGCAAGAGA
*
112801 CGCTTTTCTTCCCAACGTT
449 AGCTTTTCTTCCCAACGTT
* * * * * * *
112820 ATCGATAAAATCAAAATTTGCCTCTTAAATAAGACAAA-GCTGAAAACTCATACTAATCCCAATC
1 GTTGATAGAATC-AAAGTTGTCTCTTAAATAAGACAAACG-TGAATACTCATACTAATCCCATTC
* * * ** **
112884 TTTTTAGGATTAGGCACCATTAACATAGTCTTCTTATACGGATACGGGATATTGATGAATTGGTT
64 TTTTAAGGATTAGGCACCATAAACATAGTCTT-TTATAAGGATACATGATATTGATGCTTTGGTT
* * *
112949 TCACAAGAAAAGCTTTTTTCCCA-TAATTTTTGTAAATTCTATCTTCCTACCTCAAATGAGACAA
128 TCACAAGAAACGCTTTCTTCCCACTAATTTTTGTAAA-T-TAT-TT-CT-GCTCAAATGAGACAA
* * * *
113013 ACATGAATTCTAGTAAGGATCTTCATTCACTTCGTGATTAGGCATTATAAACACATACTCCTCAT
188 ACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCAT
* * * *
113078 TAGGATAAATGATATTGATGGTTTTTTTTTGCATGGAAATCTTTTCTTTGACTTGTTTCCCTTAA
253 TAGGATAAATGATATTAAT-GTGTTTTTTTGCATGGAAATCTTTTCTTTGACTTATTTTCCTTAA
* * * *
113143 AATCAAAGTTTG-CAGTTTAAATGAGACATGCATTGATTCCCGTAAAAGACTCCATTCCTTTCAA
317 AATCAAAGTTTGTC-CTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAA
113207 GATTGGGAACCAAAA
381 GATTGGGAACCAAAA
113222 GCTGTTCTCC
Statistics
Matches: 760, Mismatches: 103, Indels: 28
0.85 0.12 0.03
Matches are distributed among these distances:
471 1 0.00
472 5 0.01
473 104 0.14
474 465 0.61
475 167 0.22
476 18 0.02
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.36
Consensus pattern (467 bp):
GTTGATAGAATCAAAGTTGTCTCTTAAATAAGACAAACGTGAATACTCATACTAATCCCATTCTT
TTAAGGATTAGGCACCATAAACATAGTCTTTTATAAGGATACATGATATTGATGCTTTGGTTTCA
CAAGAAACGCTTTCTTCCCACTAATTTTTGTAAATTATTTCTGCTCAAATGAGACAAACATGGAT
TCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
ATGATATTAATGTGTTTTTTTGCATGGAAATCTTTTCTTTGACTTATTTTCCTTAAAATCAAAGT
TTGTCCTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAAC
CAAAAACACATACCCTTCATTAGGATACATGACATTGAGGCTTTGGTGTCGCAAGAGAAGCTTTT
CTTCCCAACGTT
Found at i:116414 original size:21 final size:21
Alignment explanation
Indices: 116381--116425 Score: 56
Period size: 21 Copynumber: 2.1 Consensus size: 21
116371 TTGCAAGTTG
*
116381 AAATAAAGAAGTTGGCTAATGA
1 AAATAAAGAAGTTAGCTAA-GA
*
116403 AAATAATG-AGTTAGCTAAGA
1 AAATAAAGAAGTTAGCTAAGA
116423 AAA
1 AAA
116426 ATGAAAACTT
Statistics
Matches: 21, Mismatches: 2, Indels: 2
0.84 0.08 0.08
Matches are distributed among these distances:
20 5 0.24
21 9 0.43
22 7 0.33
ACGTcount: A:0.53, C:0.04, G:0.20, T:0.22
Consensus pattern (21 bp):
AAATAAAGAAGTTAGCTAAGA
Found at i:118248 original size:15 final size:15
Alignment explanation
Indices: 118228--118258 Score: 53
Period size: 15 Copynumber: 2.1 Consensus size: 15
118218 TAAAAATGTC
*
118228 CAAAATGAGGAAGCT
1 CAAAATGAAGAAGCT
118243 CAAAATGAAGAAGCT
1 CAAAATGAAGAAGCT
118258 C
1 C
118259 CAAACGAAAT
Statistics
Matches: 15, Mismatches: 1, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
15 15 1.00
ACGTcount: A:0.48, C:0.16, G:0.23, T:0.13
Consensus pattern (15 bp):
CAAAATGAAGAAGCT
Found at i:120325 original size:20 final size:20
Alignment explanation
Indices: 120272--120325 Score: 90
Period size: 20 Copynumber: 2.7 Consensus size: 20
120262 ATGTCCAAAA
*
120272 TGTATCGATACATGTTTCTG
1 TGTATCGATACATTTTTCTG
*
120292 TGTATCGATACATTTTTCTT
1 TGTATCGATACATTTTTCTG
120312 TGTATCGATACATT
1 TGTATCGATACATT
120326 GTATCGATAC
Statistics
Matches: 32, Mismatches: 2, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
20 32 1.00
ACGTcount: A:0.22, C:0.15, G:0.15, T:0.48
Consensus pattern (20 bp):
TGTATCGATACATTTTTCTG
Found at i:120329 original size:13 final size:13
Alignment explanation
Indices: 120311--120349 Score: 60
Period size: 13 Copynumber: 3.0 Consensus size: 13
120301 ACATTTTTCT
120311 TTGTATCGATACA
1 TTGTATCGATACA
120324 TTGTATCGATACA
1 TTGTATCGATACA
* *
120337 CTATATCGATACA
1 TTGTATCGATACA
120350 GGGTGATTAT
Statistics
Matches: 24, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
13 24 1.00
ACGTcount: A:0.33, C:0.18, G:0.13, T:0.36
Consensus pattern (13 bp):
TTGTATCGATACA
Found at i:120494 original size:21 final size:21
Alignment explanation
Indices: 120470--120516 Score: 55
Period size: 21 Copynumber: 2.3 Consensus size: 21
120460 AAATCTTTTG
120470 CAAAAT-ACTT-GTTTTTCACTT
1 CAAAATAACTTCGTTTTTCA--T
120491 C-AAATAACTTCGTTTTTCAT
1 CAAAATAACTTCGTTTTTCAT
120511 CAAAAT
1 CAAAAT
120517 CAGCATCAAA
Statistics
Matches: 23, Mismatches: 0, Indels: 6
0.79 0.00 0.21
Matches are distributed among these distances:
20 6 0.26
21 9 0.39
22 8 0.35
ACGTcount: A:0.34, C:0.19, G:0.04, T:0.43
Consensus pattern (21 bp):
CAAAATAACTTCGTTTTTCAT
Found at i:120513 original size:20 final size:19
Alignment explanation
Indices: 120472--120514 Score: 52
Period size: 20 Copynumber: 2.2 Consensus size: 19
120462 ATCTTTTGCA
120472 AAATACTTGTTTTTCACTTC
1 AAATACTTGTTTTTCAC-TC
120492 AAATAACTTCGTTTTTCA-TC
1 AAAT-ACTT-GTTTTTCACTC
120512 AAA
1 AAA
120515 ATCAGCATCA
Statistics
Matches: 21, Mismatches: 0, Indels: 4
0.84 0.00 0.16
Matches are distributed among these distances:
20 9 0.43
21 4 0.19
22 8 0.38
ACGTcount: A:0.33, C:0.19, G:0.05, T:0.44
Consensus pattern (19 bp):
AAATACTTGTTTTTCACTC
Found at i:124532 original size:475 final size:475
Alignment explanation
Indices: 123642--125418 Score: 2426
Period size: 475 Copynumber: 3.7 Consensus size: 475
123632 TAAGCTTTCA
*
123642 ATACTAATCTGCTTTCTTTTCT-AATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGA
1 ATACTAATCCGCTTTCTTTTCTGAATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGA
* *
123706 TATCGATGCTTTGGTTTCGTAAGAAATGCTTTCCTCCCACCAATTTTTGAAAAGCATAAGTTCAT
66 TATCGATGCTTTGGTTTCGTAAGAAACGCTTTCTTCCCACCAATTTTTGAAAAGCATAAGTTCAT
* *
123771 TCCTCAAATTAGACAAACAACGATTCTAGTAAGGATCTTCATTCATTTCGTGGTTAGGCATTATA
131 TCCTCAAATGAGACAAACAACGATTCTAGTAAGGATCTTCATTCATTTCGTGGTTAGGCACTATA
* * *
123836 AACACATTCTCCCTAATAGGATAAATGTTATTGATGGTTTTCTTTTGCCTGGAAATTTTTTCTTT
196 AACACATTCTCCC-AATAGGATAAATGATATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTC
* * * * * *
123901 GTCTTATTTTTCTTAAAATAAAAGTTTGCACTTTAAATAGGACATGCATTGATTTTTGTAAAAGT
260 GTCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATAAGACATGCATTGATTCTCGTAAAAGT
* * *
123966 CTCCATTCTTTTCAACATTGGGACCCAAAAACACATTCCTTTCATTAGGATACATGACATTGATG
325 CTCCATTCTTTCCAACATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATG
** *
124031 CTTTGGTGTCGCAAGAGAAGCTGTTCTCCCCACCGTCATTGATTGAATCAAAGTTTGTCTCTTAA
390 CTTTGGTGTCGCAAGAGAAGCTGTTCTCCCCACCGTTGTTGATAGAATCAAAGTTTGTCTCTTAA
124096 ATAAGACAAACATGAATAGTC
455 ATAAGACAAACATGAATAGTC
124117 ATACTAATCCGCTTTCTTTTCT-AATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGA
1 ATACTAATCCGCTTTCTTTTCTGAATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGA
*
124181 TATCGATGTTTTGGTTTCGTAAGAAACGCTTTCTTCCCACCAATTTTTGAAAAGCATAAGTTCAT
66 TATCGATGCTTTGGTTTCGTAAGAAACGCTTTCTTCCCACCAATTTTTGAAAAGCATAAGTTCAT
* *
124246 TCCTCAAATTAGACAAACAACGATTCTAGTAAGGATCTTCATTCATTTCGTGGTTAGGCATTATA
131 TCCTCAAATGAGACAAACAACGATTCTAGTAAGGATCTTCATTCATTTCGTGGTTAGGCACTATA
* *
124311 AACACATTCTCCCAAATAGGATAAATGATATTGACGGTTTTCTTTTGCCTGGAAATTTTTTCTTC
196 AACACATTCTCCC-AATAGGATAAATGATATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTC
*
124376 GTCTTATTTTTCTTAAAATCAAAGTTTGTACTTTAAATAAGACATGCATTGATTCTCGTAAAAGT
260 GTCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATAAGACATGCATTGATTCTCGTAAAAGT
* * *
124441 CTCCATTCTTTTCAACATTGGGAGCCAAAAACACATTCCCTTCCTTAGGATACATGACATTGATG
325 CTCCATTCTTTCCAACATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATG
* * * *
124506 CTTTGGCGCCACAAGAGAAGCTGTTCTCCCCACCGTTGTTGATAGAATGAAAGTTTGTCTCTTAA
390 CTTTGGTGTCGCAAGAGAAGCTGTTCTCCCCACCGTTGTTGATAGAATCAAAGTTTGTCTCTTAA
*
124571 ATAAGACAAACATTAATAGTC
455 ATAAGACAAACATGAATAGTC
* *
124592 ATACTAATCCGCTTTCTTTTCTGGATTAGGCACCATAAAC--AGTCTTCTCATAAGGATACATCA
1 ATACTAATCCGCTTTCTTTTCTGAATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGA
** * * * * *
124655 TATCGATGCTTCAGCTTCGTAAGAAACGCTTTCTTTCCGCCAATTTCTGAAAAGTATAAGTTCAT
66 TATCGATGCTTTGGTTTCGTAAGAAACGCTTTCTTCCCACCAATTTTTGAAAAGCATAAGTTCAT
** *
124720 TCCTCAAATGAGACAAACATGGATTCTAG-AA-GATCTTCATTCATTTCGTGGTTAGACACTATA
131 TCCTCAAATGAGACAAACAACGATTCTAGTAAGGATCTTCATTCATTTCGTGGTTAGGCACTATA
* *
124783 AACACATTCTCCCCAATAGGATAAATGATATTGATGGTTTTCTTTTACCTGGAAATCTTTTCTTT
196 AACACATTCT-CCCAATAGGATAAATGATATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTC
* * * **
124848 GCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAACC
260 GTCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATAAGACATGCATTGATTCTCGTAAAAGT
* * * * *
124913 CTCCATTCTTTCCAATATTGGGAACCAAAAAAACATTCCCTTCATTAGGACACATGACATTAATA
325 CTCCATTCTTTCCAACATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATG
* * * **** * * *
124978 CTTCGATGTCGCAAGAGAAGCTTTTCTTTTTAACGTTGTTGATAAAATCAAAGTTTATCTCTTAA
390 CTTTGGTGTCGCAAGAGAAGCTGTTCTCCCCACCGTTGTTGATAGAATCAAAGTTTGTCTCTTAA
** * *
125043 ATAAGGTAAACTTGAATACTC
455 ATAAGACAAACATGAATAGTC
* * * ** *
125064 ATACTAATCC-ATATTCTTTTTTGGATTAACCACCATAAACATAGTCTTTTCATAAGGATACATG
1 ATACTAATCCGCT-TTCTTTTCTGAATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATG
* * * * * **
125128 ATATTGATACTTTGGTTTCGCAAGAAACACTTTCTTCCAACCAATTTTTGTAAATTC-TAAGTTC
65 ATATCGATGCTTTGGTTTCGTAAGAAACGCTTTCTTCCCACCAATTTTTG-AAAAGCATAAGTTC
* * ** * * *
125192 GTGCC-CTAAATGAGACAAACATGGATTCTAGTAGGGGTCTTCATTCATTTCGTGATTAGGCACT
129 ATTCCTC-AAATGAGACAAACAACGATTCTAGTAAGGATCTTCATTCATTTCGTGGTTAGGCACT
* * * * * *
125256 ACAAACACATTCTCCTCATTAGGATAAATGATATTGATGTTTTTTTTTTTGCATGAAAATCTTTT
193 ATAAACACATTCTCC-CAATAGGATAAATGATATTGATG-GTTTTCTTTTGCCTGGAAATCTTTT
* * * * *
125321 -TTC-TACCTTA-TTTCCATAAAATCGAAGTTTGTACTTTAAATGAGACATGCATTAATTCCCGT
256 CTTCGT--CTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATAAGACATGCATTGATTCTCGT
* * *
125383 AAAAGACTCCATTCCTTCCAAGATTGGGAACCAAAA
319 AAAAGTCTCCATTCTTTCCAACATTGGGAACCAAAA
125419 GTTGTTCTCC
Statistics
Matches: 1169, Mismatches: 120, Indels: 25
0.89 0.09 0.02
Matches are distributed among these distances:
471 1 0.00
472 304 0.26
473 6 0.01
474 198 0.17
475 479 0.41
476 157 0.13
477 24 0.02
ACGTcount: A:0.31, C:0.19, G:0.14, T:0.36
Consensus pattern (475 bp):
ATACTAATCCGCTTTCTTTTCTGAATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGA
TATCGATGCTTTGGTTTCGTAAGAAACGCTTTCTTCCCACCAATTTTTGAAAAGCATAAGTTCAT
TCCTCAAATGAGACAAACAACGATTCTAGTAAGGATCTTCATTCATTTCGTGGTTAGGCACTATA
AACACATTCTCCCAATAGGATAAATGATATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTCG
TCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATAAGACATGCATTGATTCTCGTAAAAGTC
TCCATTCTTTCCAACATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGC
TTTGGTGTCGCAAGAGAAGCTGTTCTCCCCACCGTTGTTGATAGAATCAAAGTTTGTCTCTTAAA
TAAGACAAACATGAATAGTC
Found at i:126258 original size:898 final size:894
Alignment explanation
Indices: 124527--126316 Score: 2496
Period size: 898 Copynumber: 2.0 Consensus size: 894
124517 CAAGAGAAGC
* * * *
124527 TGTTCTCCCCACCGTTGTTGATAGAATGAAAGTTTGTCTCTTAAATAAGACAAACATTAATAGTC
1 TGTTCTCCCCACCGTTGTTGATAGAATCAAAGTTTGTCTCTCAAAGAAGACAAACATGAATAGTC
* *
124592 ATACTAATCCGCTTTCTTTTCTGGATTAGGCACCATAAACAGTCTTCTCATAAGGATACATCATA
66 ATACTAATCCACTTTCTTTTCTAGATTAGGCACCATAAACAGTCTTCTCATAAGGATACATCATA
* * *
124657 TCGATGCTTCAGCTTCGTAAGAAACGCTTTCTTTCCGCCAATTTCTGAAAAGTATAAGTTCATTC
131 TCGATGCTTCAGCTTCGTAAGAAACGCTTTCTTCCCACCAATTTCTGAAAAGAATAAGTTCATTC
**
124722 CTCAAATGAGACAAACATGGATTCTAGAAGATCTTCATTCATTTCGTGGTTAGACACTATAAACA
196 CTCAAATGAGACAAACAACGATTCTAGAAGATCTTCATTCATTTCGTGGTTAGACACTATAAACA
124787 CATTCTCCCCAATAGGATAAATGATATTGATGGTTTTCTTTTACCTGGAAATCTTTTCTTTGCCT
261 CATTCTCCCCAATAGGATAAATGATATTGATGGTTTTCTTTTACCTGGAAATCTTTTCTTTGCCT
*
124852 TATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAACCCTCC
326 TATTTTCCTTAAAATCAAAGTTTGCACTTTAAATGAGACAAGCATTGATTCTCGTAAAACCCTCC
*
124917 ATTCTTTCCAATATTGGGAACCAAAAAAACATTCCCTTCATTAGGACACATGACATTAATACTTC
391 ATTCTTTCCAACATTGGGAACCAAAAAAACATTCCCTTCATTAGGACACATGACATTAATACTTC
* * **** **
124982 GATGTCGCAAGAGAAGCTTTTCTTTTTAACGTTGTTGATAAAATCAAAGTTTATCTCTTAAATAA
456 GATGTCACAAGAGAAGCTGTTCTCCCCAACGTCATTGATAAAATCAAAGTTTATCTCTTAAATAA
** * * *
125047 GGTAAACTTGAATACTCATACTAATCCATATTCTTTTTTGGATTAACCACCATAAACATAGTCTT
521 GACAAACATGAATACTCATACTAATCCATATTCTTTTTTGAATTAACAACCATAAACATAGTCTT
* * *
125112 TTCATAAGGATACATGATATTGATACTTTGGTTTCGCAAGAAACACTTTCTTCCAACCAATTTTT
586 CTCATAAGGATACATGATATCGAGACTTTGGTTTCGCAAGAAACACTTTCTTCCAACCAATTTTT
* *** * * * *
125177 GTAAATTCTAAGTTCGTGCCCTAAATGAGACAAACATGGATTCTAGTAGGGGTCTTCATTCATTT
651 GAAAAGAATAAGTTCATGCCCTAAATGAGACAAACAAGGATTCTAGTAAGGATCTTCATTCATTT
* * * * *
125242 CGTGATTAGGCACTACAAACACATTCTCCTCATTAGGATAAATGATATTGATGTTTTTTTTTTTG
716 CGTGATTAGGCACTACAAACACATTCTCCCCAATAGGATAAATGATATTGACGTGTTTTCTTTTG
* *
125307 CATGAAAATCTTTTTTCTACCTTATTTCCATAAAATCGAAGTTTGTACTTTAAATGAGACATGCA
781 CATGAAAATCTTTTTTCTACCTTATTTCCATAAAATCAAAGTTTGTACTTTAAATAAGACATGCA
125372 TTAATTCCCGTAAAAGACTCCATTCCTTCCAAGATTGGGAACCAAAAGT
846 TTAATTCCCGTAAAAGACTCCATTCCTTCCAAGATTGGGAACCAAAAGT
* *
125421 TGTTCTCCCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTCAAAGGAGACAAACATGAATAGTC
1 TGTTCTCCCCACCGTTGTTGATAGAATCAAAGTTTGTCTCTCAAAGAAGACAAACATGAATAGTC
* **
125486 ATACTAATCCACTTTCTTTTCTAGATTAGGCACCATAAACATAGTCTTCTCATAATGATACATGT
66 ATACTAATCCACTTTCTTTTCTAGATTAGGCACCATAAAC--AGTCTTCTCATAAGGATACATCA
* * * * *
125551 TGTCGATGCTTTAGTTTCGTAAGAAACGCTTTCTTCCCACCAATTTTTGATAAGAATAAGTTCAT
129 TATCGATGCTTCAGCTTCGTAAGAAACGCTTTCTTCCCACCAATTTCTGAAAAGAATAAGTTCAT
* * * *
125616 TCCTCAAATTAGACAAACAACGATTCTAGTAAGGATCTTCATTCTTTTCGTGGTTAGGCATTATA
194 TCCTCAAATGAGACAAACAACGATTCTAG-AA-GATCTTCATTCATTTCGTGGTTAGACACTATA
* * * * * *
125681 AACACATTCTCCCCGATAGGATAATTGATATTGATAGTTTTTTTTTTGCGTGGAAAT-TTTTGCT
257 AACACATTCTCCCCAATAGGATAAATGATATTGAT-GGTTTTCTTTTACCTGGAAATCTTTT-CT
* * *
125745 TTGTCTTATTTTTCTTAAAATCAAAGTTTGCACTTTAAAT-AGGACAAGCATTGATTTTCGTAAA
320 TTGCCTTATTTTCCTTAAAATCAAAGTTTGCACTTTAAATGA-GACAAGCATTGATTCTCGTAAA
** * * * * *
125809 AGTCTCCATTCTTTTCAACATTGGGAGCCAAAAACACATTCCCTTCATTAGGATACATGACATTG
384 ACCCTCCATTCTTTCCAACATTGGGAACCAAAAAAACATTCCCTTCATTAGGACACATGACATTA
* * * * ** *
125874 ATGCTTTGGTGTCACAAGAGAAGCTGTTCTCCCCACCGTCATTGATTGAATCAAAGTTTGTCTCT
449 ATACTTCGATGTCACAAGAGAAGCTGTTCTCCCCAACGTCATTGATAAAATCAAAGTTTATCTCT
* * **
125939 TAAATAAGACAAACATGAATAGTCATACTAATCCGCT-TTCTTTTTT-AATTAGGAACCATAAAC
514 TAAATAAGACAAACATGAATACTCATACTAATCC-ATATTCTTTTTTGAATTAACAACCATAAAC
* * * *
126002 ATAGTCTTCTCATAAGGATACATGATATCGAGGCTTTGGTTTCGTAAGAAACGCTTTCTTCCCAC
578 ATAGTCTTCTCATAAGGATACATGATATCGAGACTTTGGTTTCGCAAGAAACACTTTCTTCCAAC
* *
126067 CAATTTTTGAAAAGAATAAGTTCAT-TCCTCAAATTAGACAAACAAGGATTCTAGTAAGGATCTT
643 CAATTTTTGAAAAGAATAAGTTCATGCCCT-AAATGAGACAAACAAGGATTCTAGTAAGGATCTT
* *
126131 CATTCATTTCGTGGTTAGGCATTACAAACACATTCTCCCCAATAGGATAAATGATATTGACG-GT
707 CATTCATTTCGTGATTAGGCACTACAAACACATTCTCCCCAATAGGATAAATGATATTGACGTGT
* * * ** * *
126195 TTTCTTTTGCTTGGAAAT-TTTTTCTTTGTCTTATTTTTCTTAAAATCAAAGTTTGTACTTTAAA
772 TTTCTTTTGCATGAAAATCTTTTT-TCTACCTTA-TTTCCATAAAATCAAAGTTTGTACTTTAAA
* * * *
126259 TAAGACATGCATTAATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAA
835 TAAGACATGCATTAATTCCCGTAAAAGACTCCATTCCTTCCAAGATTGGGAACCAAAA
126317 ACACATTCCG
Statistics
Matches: 781, Mismatches: 104, Indels: 18
0.86 0.12 0.02
Matches are distributed among these distances:
894 97 0.12
896 108 0.14
897 27 0.03
898 325 0.42
899 223 0.29
900 1 0.00
ACGTcount: A:0.31, C:0.19, G:0.14, T:0.36
Consensus pattern (894 bp):
TGTTCTCCCCACCGTTGTTGATAGAATCAAAGTTTGTCTCTCAAAGAAGACAAACATGAATAGTC
ATACTAATCCACTTTCTTTTCTAGATTAGGCACCATAAACAGTCTTCTCATAAGGATACATCATA
TCGATGCTTCAGCTTCGTAAGAAACGCTTTCTTCCCACCAATTTCTGAAAAGAATAAGTTCATTC
CTCAAATGAGACAAACAACGATTCTAGAAGATCTTCATTCATTTCGTGGTTAGACACTATAAACA
CATTCTCCCCAATAGGATAAATGATATTGATGGTTTTCTTTTACCTGGAAATCTTTTCTTTGCCT
TATTTTCCTTAAAATCAAAGTTTGCACTTTAAATGAGACAAGCATTGATTCTCGTAAAACCCTCC
ATTCTTTCCAACATTGGGAACCAAAAAAACATTCCCTTCATTAGGACACATGACATTAATACTTC
GATGTCACAAGAGAAGCTGTTCTCCCCAACGTCATTGATAAAATCAAAGTTTATCTCTTAAATAA
GACAAACATGAATACTCATACTAATCCATATTCTTTTTTGAATTAACAACCATAAACATAGTCTT
CTCATAAGGATACATGATATCGAGACTTTGGTTTCGCAAGAAACACTTTCTTCCAACCAATTTTT
GAAAAGAATAAGTTCATGCCCTAAATGAGACAAACAAGGATTCTAGTAAGGATCTTCATTCATTT
CGTGATTAGGCACTACAAACACATTCTCCCCAATAGGATAAATGATATTGACGTGTTTTCTTTTG
CATGAAAATCTTTTTTCTACCTTATTTCCATAAAATCAAAGTTTGTACTTTAAATAAGACATGCA
TTAATTCCCGTAAAAGACTCCATTCCTTCCAAGATTGGGAACCAAAAGT
Found at i:126497 original size:205 final size:205
Alignment explanation
Indices: 126181--126549 Score: 578
Period size: 205 Copynumber: 1.8 Consensus size: 205
126171 AATAGGATAA
* * * * * * *
126181 ATGATATTGACGGTTTTCTTTTGCTTGGAAATTTTTTCTTTGTCTTATTTTTCTTAAAATCAAAG
1 ATGATATTGACGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTCACTTTCCTTAAAATCAAAG
* *
126246 TTTGTACTTTAAATAAGACATGCATTAATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAA
66 TTTGTACTTTAAATAAGACAAGCATTAATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAA
*
126311 CCAAAAACACATTC-CGTTCATTAGGATATATGACATTAATTAGGCATTATAAACACATTCTTCT
131 CCAAAAACACATTCTC-TTCATTAGGATACATGACATTAATTAGGCATTATAAACACATTCTTCT
126375 CCTCAGGAAGC
195 CCTCAGGAAGC
* * *
126386 ATGATATTGATGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTCACTTTCCTTCAGATCAAAG
1 ATGATATTGACGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTCACTTTCCTTAAAATCAAAG
* * *
126451 TTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGTAA
66 TTTGTACTTTAAATAAGACAAGCATTAATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAA
126516 CCAAAAACACATTCTCTTCATTAGGATACATGAC
131 CCAAAAACACATTCTCTTCATTAGGATACATGAC
126550 GTTCATGCTT
Statistics
Matches: 147, Mismatches: 16, Indels: 2
0.89 0.10 0.01
Matches are distributed among these distances:
205 146 0.99
206 1 0.01
ACGTcount: A:0.30, C:0.18, G:0.13, T:0.39
Consensus pattern (205 bp):
ATGATATTGACGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTCACTTTCCTTAAAATCAAAG
TTTGTACTTTAAATAAGACAAGCATTAATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAA
CCAAAAACACATTCTCTTCATTAGGATACATGACATTAATTAGGCATTATAAACACATTCTTCTC
CTCAGGAAGC
Found at i:127000 original size:680 final size:680
Alignment explanation
Indices: 125669--127027 Score: 1783
Period size: 680 Copynumber: 2.0 Consensus size: 680
125659 CTTTTCGTGG
* * * *
125669 TTAGGCATTATAAACACATTCTCCCCGATAGGATAATTGATATTGATAGTTTTTTTTTTGCGTGG
1 TTAGGCATTATAAACACATTCTCCCC-ATAGGATAATTGATATTGATAGGTTTTCTTTTGCATGA
* * * *
125734 AAATTTTTGCTTTGTCTTATTTTTCTTAAAATCAAAGTTTGCACTTTAAATAGGACAAGCATTGA
65 AAATTTTTGCTTTGCCTCACTTTCCTTAAAATCAAAGTTTGCACTTTAAATAGGACAAGCATTGA
* * *
125799 TTTTCGTAAAAGTCTCCATTCTTTTCAACATTGGGAGCCAAAAACACATTCCCTTCATTAGGATA
130 TTCTCGTAAAAGTCTCCATTCTTTCCAACATTGGGAACCAAAAACACATTCCCTTCATTAGGATA
* * * **
125864 CATGACATTGATGCTTTGGTGTCACAAGAGAAGCTGTTCTCCCCACCGTCATTGATTGAATCAAA
195 CATGACATTCATGCTTCGGTGTCACAAGAGAAGCTGTTCTCCCCAACGTCATTGATAAAATCAAA
* * * * **
125929 GTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCGCTTTCTTTTTTAATTAGGAA
260 GTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCACATTCTTTTTCAATTAACAA
* *
125994 CCATAAACATAGTCTTCTCATAAGGATACATGATATCGAGGCTTTGGTTTCGTAAGAAACGCTTT
325 CCATAAACATAGTCTTCTCATAAGGATACATGATATCGAGGCTTTGGTTTCGCAAGAAACACTTT
* ** *
126059 CTTCCCACCAATTTTTGAAAAGAATAAGTTCATTCCTCAAATTAGACAAACAAGGATTCTAGTAA
390 CTTCCCACCAATTTTAGAAAAGAATAAGTTCACCCCTCAAATGAGACAAACAAGGATTCTAGTAA
* * * *
126124 GGATCTTCATTCATTTCGTGGTTAGGCATTACAAACACATTCTCCCCAATAGGATAAATGATATT
455 GGATCATCATTCATTTCGTGATTAGGCACTACAAACACATTCTCCCCAATAGGATAAACGATATT
* * * * *
126189 GACGGTTTTCTTTTGCTTGGAAATTTTTTCTTTGTCTTATTTTTCTTAAAATCAAAGTTTGTACT
520 GACGGTTTTCTTTTGCATGAAAATATTTTCTTTGTCTTATTTTCCATAAAATCAAAGTTTGTACT
* * *
126254 TTAAATAAGACATGCATTAATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAAC
585 TTAAATAAGACAAGCATTAATTCGCGTAAAAGTCTCCATTCTTTTCAAGATTGGAAACCAAAAAC
* *
126319 ACATTCCGTTCATTAGGATATATGACATTAA
650 ACATTCCCTTCATTAGGATACATGACATTAA
*
126350 TTAGGCATTATAAACACATTCTTCTCC-TCAGGA-AGCA-TGATATTGAT-GGTTTTCTTTTGCA
1 TTAGGCATTATAAACACATTC-TCCCCAT-AGGATA--ATTGATATTGATAGGTTTTCTTTTGCA
* * *
126411 TGAAAATCTTTT-CTTTGCCTCACTTTCCTTCAGATCAAAGTTTGTACTTTAAAT-GAGACAAGC
62 TGAAAAT-TTTTGCTTTGCCTCACTTTCCTTAAAATCAAAGTTTGCACTTTAAATAG-GACAAGC
* * *
126474 ATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGTAACCAAAAACACATTCTCTTCATTA
125 ATTGATTCTCGTAAAAGTCTCCATTCTTTCCAACATTGGGAACCAAAAACACATTCCCTTCATTA
* ** * **
126539 GGATACATGACGTTCATGCTTCGGTGTCGTAAGAGAAGCT-TT-TCCTTCTAACGTTGTTGATAA
190 GGATACATGACATTCATGCTTCGGTGTCACAAGAGAAGCTGTTCTCC--CCAACGTCATTGATAA
* **
126602 AATCAAAGTTTGTCTCTTAAATAAGGCAAATTTGAATACTCATACTAATCCACATTC-TTTTCAG
253 AATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCACATTCTTTTTCA-
* * * * * *
126666 GATTAACCACCATAAACATAGTCTTTTTATAAGGATACATGATATTGATGCTTTGGTTTTGCAAG
317 -ATTAACAACCATAAACATAGTCTTCTCATAAGGATACATGATATCGAGGCTTTGGTTTCGCAAG
* *** * *
126731 AAACACTTTCTTCCCACCAATTTTAGTAAATTCTAAGTTCGCCCCTCAAATGAGACAAACATGGA
381 AAACACTTTCTTCCCACCAATTTTAGAAAAGAATAAGTTCACCCCTCAAATGAGACAAACAAGGA
* * * * *
126796 TTCTAGTAGGGGTCATCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCC-TTAGGAT
446 TTCTAGTAAGGATCATCATTCATTTCGTGATTAGGCACTACAAACACATTCTCC-CCAATAGGAT
* *
126860 AAACGATATTGATGGTTTTCTTTTTCATGAAAATATTTTCTTTG-CATTA-TTTCCATAAAATCA
510 AAACGATATTGACGGTTTTCTTTTGCATGAAAATATTTTCTTTGTC-TTATTTTCCATAAAATCA
*
126923 AAGTTTGTACTTTAAATGAA-ACAAGCATTGATTCGCGTAAAAGTCTCCATT-TTTTCCAAGATT
574 AAGTTTGTACTTTAAAT-AAGACAAGCATTAATTCGCGTAAAAGTCTCCATTCTTTT-CAAGATT
126986 GGAAACCAAAAACACATTCCCTTCATTAGGATACATGACATT
637 GGAAACCAAAAACACATTCCCTTCATTAGGATACATGACATT
127028 GATGCTTTGG
Statistics
Matches: 586, Mismatches: 78, Indels: 29
0.85 0.11 0.04
Matches are distributed among these distances:
678 3 0.01
679 12 0.02
680 320 0.55
681 244 0.42
682 7 0.01
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.36
Consensus pattern (680 bp):
TTAGGCATTATAAACACATTCTCCCCATAGGATAATTGATATTGATAGGTTTTCTTTTGCATGAA
AATTTTTGCTTTGCCTCACTTTCCTTAAAATCAAAGTTTGCACTTTAAATAGGACAAGCATTGAT
TCTCGTAAAAGTCTCCATTCTTTCCAACATTGGGAACCAAAAACACATTCCCTTCATTAGGATAC
ATGACATTCATGCTTCGGTGTCACAAGAGAAGCTGTTCTCCCCAACGTCATTGATAAAATCAAAG
TTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCACATTCTTTTTCAATTAACAAC
CATAAACATAGTCTTCTCATAAGGATACATGATATCGAGGCTTTGGTTTCGCAAGAAACACTTTC
TTCCCACCAATTTTAGAAAAGAATAAGTTCACCCCTCAAATGAGACAAACAAGGATTCTAGTAAG
GATCATCATTCATTTCGTGATTAGGCACTACAAACACATTCTCCCCAATAGGATAAACGATATTG
ACGGTTTTCTTTTGCATGAAAATATTTTCTTTGTCTTATTTTCCATAAAATCAAAGTTTGTACTT
TAAATAAGACAAGCATTAATTCGCGTAAAAGTCTCCATTCTTTTCAAGATTGGAAACCAAAAACA
CATTCCCTTCATTAGGATACATGACATTAA
Found at i:127157 original size:158 final size:158
Alignment explanation
Indices: 126491--127157 Score: 350
Period size: 158 Copynumber: 4.2 Consensus size: 158
126481 CTCGTAAAAG
* * ** * * * *
126491 TCTCCATTCTTTCCAAGATTGGTAACCAAAAACACATTCTCTTCATTAGGATACATGACGTTCAT
1 TCTCCATTCTTTTCAAGATTAGCCACCATAAACACATTCCCTTCATTAGGATACATGACATTGAT
* * * *
126556 GCTTCGGTGTCGTAAGAGAAGCTTTTCCTTC-TAACGTTGTTGATAAAATCAAAGTTTGTCTCTT
66 GCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCTTAA-GTT-TTGATAAAATCAAAGTTTCTCTCTT
* * *
126620 AAATAAGGCAAATTTGAATACTCATACTAA
129 AAATAAGACAAACTTGAGTACTCATACTAA
* * * * ** * * *
126650 TC-CACATTCTTTTCAGGATTAACCACCATAAACATAGTCTTTTTATAAGGATACATGATATTGA
1 TCTC-CATTCTTTTCAAGATTAGCCACCATAAACACATTCCCTTCATTAGGATACATGACATTGA
* * * ** * * * *
126714 TGCTTTGGTTTTGCAAGA-AA-CACTTTC-TTCCCACCAATTTT-AGTAAATTCTAAG-TTCGCC
65 TGCTTTGGTGTCGCAAGAGAAGC-TTTTCTTTCTTA--AGTTTTGA-TAAAATCAAAGTTTC-TC
* * * * * * *
126774 CCTCAAATGAGACAAACATG-G-ATTC-TAGTAGGGG
125 TCTTAAATAAGACAAACTTGAGTACTCATACTA---A
** * * * * * *
126808 TCAT-CATTCATTTT-GTGATTAGGCACTATAAACACATTCTCC-TCCTTAGGATAAACGATATT
1 TC-TCCATTC-TTTTCAAGATTAGCCACCATAAACACATTC-CCTTCATTAGGATACATGACATT
* ** * ** * * ** ** *
126870 GATGGTTTTCTTTTTCATGAAAATATTTTCTTTGCATT-A-TTTCCATAAAATCAAAGTTTGTAC
63 GATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTT-C-TTAAGTTTTGATAAAATCAAAGTTTCT-C
* * * * *
126933 T-TTAAATGAA-ACAAGCATTGA-TTCGCGTA-AAA
125 TCTTAAAT-AAGACAAAC-TTGAGTACTCATACTAA
* ** *
126965 GTCTCCATT-TTTTCCAAGATTGGAAACCAAAAACACATTCCCTTCATTAGGATACATGACATTG
1 -TCTCCATTCTTTT-CAAGATTAGCCACCATAAACACATTCCCTTCATTAGGATACATGACATTG
127029 ATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCTTAAGTTGTTGATAAAATC-AAGTTTCTCTCT
64 ATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCTTAAGTT-TTGATAAAATCAAAGTTTCTCTCT
*
127093 TAAATAAGGCAAACTTGAGTACTCATACTAA
128 TAAATAAGACAAACTTGAGTACTCATACTAA
127124 TCTCCATTCTTTTCAAGATTAGCCACCATAAACA
1 TCTCCATTCTTTTCAAGATTAGCCACCATAAACA
127158 TAGTCTTCTG
Statistics
Matches: 360, Mismatches: 108, Indels: 81
0.66 0.20 0.15
Matches are distributed among these distances:
155 4 0.01
156 9 0.03
157 20 0.06
158 223 0.62
159 96 0.27
160 5 0.01
161 3 0.01
ACGTcount: A:0.32, C:0.19, G:0.14, T:0.35
Consensus pattern (158 bp):
TCTCCATTCTTTTCAAGATTAGCCACCATAAACACATTCCCTTCATTAGGATACATGACATTGAT
GCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCTTAAGTTTTGATAAAATCAAAGTTTCTCTCTTAA
ATAAGACAAACTTGAGTACTCATACTAA
Found at i:127427 original size:474 final size:476
Alignment explanation
Indices: 126349--127504 Score: 1689
Period size: 474 Copynumber: 2.4 Consensus size: 476
126339 TATGACATTA
* *
126349 ATTAGGCATTATAAACACATTCTTCTCCTCAGGAAGCATGATATTGATGGTTTTCTTTTGCATGA
1 ATTAGGCACTATAAACACATTCTTCTCCTCAGGATGCATGATATTGATGGTTTTCTTTTGCATGA
* *
126414 AAATCTTTTCTTTGCCTCACTTTCCTTCAGATCAAAGTTTGTACTTTAAATGAGACAAGCATTGA
66 AAATCTTTTCTTTGCCTCACTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGA
* *
126479 TTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGTAACCAAAAACACATTCTCTTCATTAGGATA
131 TTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGAAACCAAAAACACATTCCCTTCATTAGGATA
* * *
126544 CATGACGTTCATGCTTCGGTGTCGTAAGAGAAGCTTTTCCTTCTAACGTTGTTGATAAAATCAAA
196 CATGACATTGATGCTTCGGTGTCGCAAGAGAAGCTTTTCCTTCTAACGTTGTTGATAAAATCAAA
* * *
126609 GTTTGTCTCTTAAATAAGGCAAATTTGAATACTCATACTAATCCACATTCTTTTCAGGATTAACC
261 GTTTCTCTCTTAAATAAGGCAAACTTGAATACTCATACTAATCCACATTCTTTTCAAGATTAACC
* * * * **
126674 ACCATAAACATAGTCTTTTTATAAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAACACTT
326 ACCATAAACATAGTCTTCTGATAAGGATACAAGATATTGATGATTTGGTTTCACAAGAAACACTT
126739 TCTTCCCACCAATTTTAGTAAATTCTAAGTTCGCCCCTCAAATGAGACAAACATGGATTCTAGTA
391 TCTTCCCACCAATTTTAGTAAATTCTAAGTTCGCCCCTCAAATGAGACAAACATGGATTCTAGTA
* ** *
126804 GGGGTCATCATTCATTTTGTG
456 AGAATCATCATTCATTTCGTG
* * ** * *
126825 ATTAGGCACTATAAACACATTCTCCTCCTTAGGATAAACGATATTGATGGTTTTCTTTTTCATGA
1 ATTAGGCACTATAAACACATTCTTCTCCTCAGGATGCATGATATTGATGGTTTTCTTTTGCATGA
* * * * *
126890 AAATATTTTCTTTGCATTA-TTTCCATAAAATCAAAGTTTGTACTTTAAATGAAACAAGCATTGA
66 AAATCTTTTCTTTGCCTCACTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGA
* *
126954 TTCGCGTAAAAGTCTCCATTTTTTCCAAGATTGGAAACCAAAAACACATTCCCTTCATTAGGATA
131 TTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGAAACCAAAAACACATTCCCTTCATTAGGATA
* *
127019 CATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCTTAA-GTTGTTGATAAAATC-A
196 CATGACATTGATGCTTCGGTGTCGCAAGAGAAGCTTTTCCTTC-TAACGTTGTTGATAAAATCAA
* *
127082 AGTTTCTCTCTTAAATAAGGCAAACTTGAGTACTCATACTAATCTC-CATTCTTTTCAAGATTAG
260 AGTTTCTCTCTTAAATAAGGCAAACTTGAATACTCATACTAATC-CACATTCTTTTCAAGATTAA
* * * *
127146 CCACCATAAACATAGTCTTCTGATACGGATACAAGA-ATTTGATGATTTGGTTTCACTAGGAACG
324 CCACCATAAACATAGTCTTCTGATAAGGATACAAGATA-TTGATGATTTGGTTTCACAAGAAACA
* * * * ** *
127210 CTTTTTTCCCA-CAATTTTTGTAGATTCTATGTTCGTGCCTCAAATGAGATAAACATGGATTCTA
388 CTTTCTTCCCACCAATTTTAGTAAATTCTAAGTTCGCCCCTCAAATGAGACAAACATGGATTCTA
127274 GTAAGAATCATCATTCATTTCGTG
453 GTAAGAATCATCATTCATTTCGTG
*
127298 ATTAGGCACTATAAACACATTCTTCTCCTCAGGATGCATGATATTGATGGTTTTCTTTTGCATGG
1 ATTAGGCACTATAAACACATTCTTCTCCTCAGGATGCATGATATTGATGGTTTTCTTTTGCATGA
* * *
127363 AAATCTTTTTTTTGCCTCACTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGAGATGCATTGA
66 AAATCTTTTCTTTGCCTCACTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGA
* * *
127428 TTCTCGTAAAAGTCTCCATTCTTTCTAACATTGGGAAA--AAAGAACACATTCCCTTTATTAGGA
131 TTCTCGTAAAAGTCTCCATTCTTTCCAAGATT-GGAAACCAAA-AACACATTCCCTTCATTAGGA
*
127491 TACAAGACATTGAT
194 TACATGACATTGAT
127505 AGAATCAAAG
Statistics
Matches: 603, Mismatches: 71, Indels: 14
0.88 0.10 0.02
Matches are distributed among these distances:
473 144 0.24
474 222 0.37
475 161 0.27
476 76 0.13
ACGTcount: A:0.31, C:0.19, G:0.15, T:0.36
Consensus pattern (476 bp):
ATTAGGCACTATAAACACATTCTTCTCCTCAGGATGCATGATATTGATGGTTTTCTTTTGCATGA
AAATCTTTTCTTTGCCTCACTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGA
TTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGAAACCAAAAACACATTCCCTTCATTAGGATA
CATGACATTGATGCTTCGGTGTCGCAAGAGAAGCTTTTCCTTCTAACGTTGTTGATAAAATCAAA
GTTTCTCTCTTAAATAAGGCAAACTTGAATACTCATACTAATCCACATTCTTTTCAAGATTAACC
ACCATAAACATAGTCTTCTGATAAGGATACAAGATATTGATGATTTGGTTTCACAAGAAACACTT
TCTTCCCACCAATTTTAGTAAATTCTAAGTTCGCCCCTCAAATGAGACAAACATGGATTCTAGTA
AGAATCATCATTCATTTCGTG
Found at i:127910 original size:432 final size:429
Alignment explanation
Indices: 127070--127936 Score: 1113
Period size: 432 Copynumber: 2.0 Consensus size: 429
127060 TCTTAAGTTG
* * * *
127070 TTGATAAAATCAAGTTTCTCTCTTAAATAAGGCAAACTTGAGTACTCATACTAATCTCCATTCTT
1 TTGATAAAATCAAGTTTATCTCTTAAATAAGACAAACATGAATACTCATACTAATCTCCATTCTT
* * *
127135 TTCAAGATTAGCCACCATAAACATAGTCTTCTGATACGGATACAAGAATTTGATGATTTGGTTTC
66 TTCAAGATTAGCCACCATAAACAAAGTCTTCTAATAAGGATACAAGAATTTGATGATTTGGTTTC
* * * ** * *
127200 ACTAGGAACGCTTTTTTCCCACAATTTTTGTAGATTCTATGTTCGTGCCTCAAATGAGATAAACA
131 ACAAGAAACACTTTCATCCCACAATTTTTGTAGATTCAATGTTCGTGCCCCAAATGAGATAAACA
* * *
127265 TGGATTCTAGTAAGAATCATCATTCATTTCGTGATTAGGCACTATAAACACATTCTTCTCCTCAG
196 AGGATTCTAGTAAGAATCATCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCCTCAG
** * * * *
127330 GATGCATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTTTTTGCCTCACTTTCCTTAAAAT
261 GATAAAAGATATTAATGGTTTTCTTTTGCATGGAAATATTTTCTTTGCCTCACTTTCCTTAAAAT
* * **
127395 CAAAGTTTGTACTTTAAATGAGAGATGCATTGATTCTCGTAAAAGTCTCCATTCTTTCTAACATT
326 CAAAGTTTGTACTTTAAAAGAGACATGCATTGATTCTCACAAAAGTCTCCATTCTTTCTAACATT
*
127460 GGGAAAAAAGAACACATTCCCTTT-ATTAGGATACAAGACA
391 GGGAAAAAAG-ACACATT-CCTTTCAATAGGATACAAGACA
*
127500 TTGATAGAATCAAAGTTTATCTCTTAAATAAGACAAACATGAATACTCATACTAATC-CACATTC
1 TTGATAAAATC-AAGTTTATCTCTTAAATAAGACAAACATGAATACTCATACTAATCTC-CATTC
** * * * * * *
127564 TTTTCTGGATTAGGCACCGTAAACAAATTCTTCTAATAAGGATATATG-ATATTGATGCTTTGGT
64 TTTTCAAGATTAGCCACCATAAACAAAGTCTTCTAATAAGGATACAAGAAT-TTGATGATTTGGT
*
127628 TTCGCAAGAAACACTTTCATCCCACCAATTTTTTGTTA-ATTCAAAT-TTCGTGCCCCAAATGAG
128 TTCACAAGAAACACTTTCATCCCA-CAA-TTTTTG-TAGATTC-AATGTTCGTGCCCCAAATGAG
* * *
127691 ATAAGCAAGGATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCACTATAAACACATTCTCC
189 ATAAACAAGGATTCTAGTAAGAATCATCATTCATTTCATGATTAGGCACTATAAACACATTCTCC
* * * *
127756 TCATTC-GGATAAAAGATATTAATGGTTTT-TTTTGCGTGGAAATATTTTCTTTGCCTTATTTTC
254 TC-CTCAGGATAAAAGATATTAATGGTTTTCTTTTGCATGGAAATATTTTCTTTGCCTCACTTTC
* *
127819 CTTAAAATCAAAGTTTGTACTTTAAAAGAGACATGCGTTGATTTTCACAAAAGTCTCCATTCTTT
318 CTTAAAATCAAAGTTTGTACTTTAAAAGAGACATGCATTGATTCTCACAAAAGTCTCCATTCTTT
* *
127884 -TCAAGATTGGGAACCAAAAG-CACATTCCTTTCAATAGGATACATGACA
383 CT-AACATTGGGAA--AAAAGACACATTCCTTTCAATAGGATACAAGACA
127932 TTGAT
1 TTGAT
127937 GCTTTGGTGT
Statistics
Matches: 376, Mismatches: 49, Indels: 22
0.84 0.11 0.05
Matches are distributed among these distances:
430 13 0.03
431 120 0.32
432 126 0.34
433 106 0.28
434 11 0.03
ACGTcount: A:0.32, C:0.18, G:0.14, T:0.36
Consensus pattern (429 bp):
TTGATAAAATCAAGTTTATCTCTTAAATAAGACAAACATGAATACTCATACTAATCTCCATTCTT
TTCAAGATTAGCCACCATAAACAAAGTCTTCTAATAAGGATACAAGAATTTGATGATTTGGTTTC
ACAAGAAACACTTTCATCCCACAATTTTTGTAGATTCAATGTTCGTGCCCCAAATGAGATAAACA
AGGATTCTAGTAAGAATCATCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCCTCAG
GATAAAAGATATTAATGGTTTTCTTTTGCATGGAAATATTTTCTTTGCCTCACTTTCCTTAAAAT
CAAAGTTTGTACTTTAAAAGAGACATGCATTGATTCTCACAAAAGTCTCCATTCTTTCTAACATT
GGGAAAAAAGACACATTCCTTTCAATAGGATACAAGACA
Found at i:128413 original size:475 final size:470
Alignment explanation
Indices: 127502--128854 Score: 1685
Period size: 475 Copynumber: 2.8 Consensus size: 470
127492 ACAAGACATT
* * *
127502 GATAGAATCAAAGTTTATCTCTTAAATAAGACAAACATGAATACTCATACTAATCCACATTCTTT
1 GATAGAATCAAAG-TTGTCTCTTAAATAAGACAAACGTGAATACTCATACTAATCCCCATTCTTT
* * * * * * *
127567 TCTGGATTAGGCACCGTAAACAAATTCTTCTAATAAGGATATATGATATTGATGCTTTGGTTTCG
65 TCAGGATTAGGCACCATAAACATAGTCTT-TTATAAGGATACATGATATTGATGCTTTGGTTTCA
* * * * * *
127632 CAAGAAACACTTTCATCCCACCAATTTTTTGTTAATTCAAATTTCGTGCCCCAAATGAGATAAGC
129 CAAGAAACGCTTTCTTCTCACCAA-TTTTTGTAAATT---ATTTCGTGCCTCAAATGAGATAAAC
* *
127697 AAGGATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCATTC
190 AAGGATTCTTGTAAGGATCTTCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCATTA
* * * *
127762 GGATAAAAGATATTAATGGTTTTTTTTGCGTGGAAATATTTTCTTTGCCTTATTTTCCTTAAAAT
255 GGATAAATGATATTAATGGTTTTTTTTGCATGGAAATCTTTTCTTTGACTTATTTTCCTTAAAAT
* * * **
127827 CAAAGTTTGTACTTTAAAAGAGACATGCGTTGATTTTCACAAAAGTCTCCATTCTTTTCAAGATT
320 CAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATT
* *
127892 GGGAACCAAAAGCACATTCCTTTCAATAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAA
385 GGGAACCAAAAACACATTCCTTTCAATAGGATACATGACATTGATGCCTTGGTGTCGCAAGAGAA
* * * *
127957 GCTTTTCTTTCCACCGTTGTT
450 GCTTTTCTTCCCAACGTTATC
* * * *
127978 GTTAGAATCAAAGTTGTCTGTTAAATATGACAAACGTGAATACTCATACTAATCCCCATTCCTTT
1 GATAGAATCAAAGTTGTCTCTTAAATAAGACAAACGTGAATACTCATACTAATCCCCATTCTTTT
*
128043 CAGGATTAGGCACCATAAACATAGTCTTTTCATAAGGATACATGATCTTGATGCTTTGGTTTCAC
66 CAGGATTAGGCACCATAAACATAGTCTTTT-ATAAGGATACATGATATTGATGCTTTGGTTTCAC
* *
128108 AGGATACGCTTTCTTCTCACCAATTTTTGTAAAGTATGAGTTTAC-TG-CTCAAATGAGATAAAC
130 AAGAAACGCTTTCTTCTCACCAATTTTTGTAAA-T-T-A-TTT-CGTGCCTCAAATGAGATAAAC
* * * *
128171 ATGGATTCTTGTAGGGATCTTCATTCATTTCATGATTAGGCACTATAAACACATTTTCCTCTTTA
190 AAGGATTCTTGTAAGGATCTTCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCATTA
* * * *
128236 GGATAAATGATATTTATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGTCATATTTTCCTTAAAA
255 GGATAAATGATATTAATGGTTTT-TTTTGCATGGAAATCTTTTCTTTGACTTATTTTCCTTAAAA
* *
128301 TCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTTTTTTCAACAT
319 TCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGAT
* * * * *
128366 TGGGAACCAAAAACGCATTCCTTTCATTGGGATACGTTACATTGATGCCTTGGTGTCGCAAGAGA
384 TGGGAACCAAAAACACATTCCTTTCAATAGGATACATGACATTGATGCCTTGGTGTCGCAAGAGA
*
128431 CGCTTTTCTTCCCAACGTTATC
449 AGCTTTTCTTCCCAACGTTATC
* * * *
128453 GATAAAATCAAAATTTGCCTCTTAAATAAGACAAA-GCTGAAAACTCATACTAAT-CCCATTCTT
1 GATAGAATC-AAAGTTGTCTCTTAAATAAGACAAACG-TGAATACTCATACTAATCCCCATTCTT
* * ** **
128516 TTTAGGATTAGGCACCATTAACATAGTCTTCTTATACA-GATACGGGATATTGATGAATTGGTTT
64 TTCAGGATTAGGCACCATAAACATAGTCTT-TTATA-AGGATACATGATATTGATGCTTTGGTTT
* * *
128580 CACAAGAAAAGCTTGT-TTCTCA-TAATTTTTGTAAATTCTATGTTCGTGCCTCAAATGAGACAA
127 CACAAGAAACGCTT-TCTTCTCACCAATTTTTGTAAA-T-TAT-TTCGTGCCTCAAATGAGATAA
* * * * * *
128643 ACACGAATTCTTGTAAGGATCTTCATTCACTTCGTGATTAGGCATTATAAACACATACTCCTCAT
188 ACAAGGATTCTTGTAAGGATCTTCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCAT
* * *
128708 TAGGATAAATGATATTGATGGTTTTTTTTTTTTGCATGGAAATCTTTTCTTTGACTTGTTTCCCT
253 TAGGATAAATGATATTAATGG----TTTTTTTTGCATGGAAATCTTTTCTTTGACTTATTTTCCT
** * * *
128773 TAAAATCAAAGTTTACACTTTAAATGAGACATGCATTGATTCCCGTAAAAGACTCCATTCCTTTC
314 TAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTC
128838 AAGATTGGGAACCAAAA
379 AAGATTGGGAACCAAAA
128855 GCTGTTCTCC
Statistics
Matches: 760, Mismatches: 99, Indels: 35
0.85 0.11 0.04
Matches are distributed among these distances:
472 2 0.00
473 5 0.01
474 208 0.27
475 380 0.50
476 55 0.07
477 106 0.14
478 4 0.01
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.36
Consensus pattern (470 bp):
GATAGAATCAAAGTTGTCTCTTAAATAAGACAAACGTGAATACTCATACTAATCCCCATTCTTTT
CAGGATTAGGCACCATAAACATAGTCTTTTATAAGGATACATGATATTGATGCTTTGGTTTCACA
AGAAACGCTTTCTTCTCACCAATTTTTGTAAATTATTTCGTGCCTCAAATGAGATAAACAAGGAT
TCTTGTAAGGATCTTCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
ATGATATTAATGGTTTTTTTTGCATGGAAATCTTTTCTTTGACTTATTTTCCTTAAAATCAAAGT
TTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAAC
CAAAAACACATTCCTTTCAATAGGATACATGACATTGATGCCTTGGTGTCGCAAGAGAAGCTTTT
CTTCCCAACGTTATC
Found at i:130828 original size:205 final size:205
Alignment explanation
Indices: 130512--130883 Score: 577
Period size: 205 Copynumber: 1.8 Consensus size: 205
130502 AATAGGATAA
* * * * * *
130512 ATGATATTGACGGTTTTCTTTTGCTTGGAAATTTTTTCTTTCTCTTATTTTTCTTAAAATCAAAG
1 ATGATATTGACGGTTTTCTTTTGCATGAAAATCTTTTCTTTCTCTCACTTTCCTTAAAATCAAAG
* *
130577 TTTGTACTTTAAATAAGACATGCATTAATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAA
66 TTTGTACTTTAAATAAGACAAGCATTAATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAA
*
130642 CCAAAAACACATTC-CTTTCATTAGGATATATGACATTAATTAGGCATTATAAACATATTCTTCT
131 CCAAAAACACATTCTC-TTCATTAGGATACATGACATTAATTAGGCATTATAAACATATTCTTCT
130706 CCTCAGGAAGC
195 CCTCAGGAAGC
* *
130717 ATGATATTGATGGTTTTCTTTTGCATGAAAATCTTTTCTTTGC-CTCACTTTCCTTCAAATCAAA
1 ATGATATTGACGGTTTTCTTTTGCATGAAAATCTTTTCTTT-CTCTCACTTTCCTTAAAATCAAA
* * *
130781 GTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGTA
65 GTTTGTACTTTAAATAAGACAAGCATTAATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGA
*
130846 ACCAAACACACATTCTCTTCATTAGGATACATGACATT
130 ACCAAAAACACATTCTCTTCATTAGGATACATGACATT
130884 CATGCTTCGG
Statistics
Matches: 150, Mismatches: 15, Indels: 4
0.89 0.09 0.02
Matches are distributed among these distances:
205 148 0.99
206 2 0.01
ACGTcount: A:0.30, C:0.18, G:0.12, T:0.40
Consensus pattern (205 bp):
ATGATATTGACGGTTTTCTTTTGCATGAAAATCTTTTCTTTCTCTCACTTTCCTTAAAATCAAAG
TTTGTACTTTAAATAAGACAAGCATTAATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAA
CCAAAAACACATTCTCTTCATTAGGATACATGACATTAATTAGGCATTATAAACATATTCTTCTC
CTCAGGAAGC
Found at i:131332 original size:680 final size:681
Alignment explanation
Indices: 130037--131358 Score: 1782
Period size: 680 Copynumber: 1.9 Consensus size: 681
130027 ATAGGATAAT
* * * * * * * *
130037 TGATATTGATAGTTTTTTTTTTGCGTGGAAATTTTTGCTTTGTCTTATTTTTCTTAAAATCAAAG
1 TGATATTGATAGGTTTTCTTTTGCATGAAAATTTTTGCTTTGCCTCACTTTCCTTAAAATCAAAG
* * * *
130102 TTTGCACTTTAAATAGGACATGCATTGATTTTCGTAAAAGTCTCCATTATTTTCAACATTGGGAG
66 TTTGCACTTTAAATAGGACAAGCATTGATTCTCGTAAAAGTCTCCATTATTTCCAACATTGGGAA
** * *
130167 CCAAAAACACATTCCCTTTTTTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTGT
131 CCAAAAACACATTCCCTTCATTAGGATACATGACATTCATGCTTCGGTGTCGCAAGAGAAGCTGT
* ** * *
130232 TCTCCCTACCGTCATTGATTGAATCAAAGTTTGTCTTTTAAATAAGACAAACATGAATAGTCATA
196 TCTCCCTAACGTCATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATA
* * ** **
130297 CTAATCCGCTTTCTTTTTTAATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATC
261 CTAATCCACATTCTTTTCAAATTAACCACCATAAACATAGTCTTCTCATAAGGATACATGATATC
* * * **
130362 GAGGCTTTGGTTTCGTAAGAAACGCTTTCTTCCCACCAATTTTTGAAAAGTATAAGTTCATTCCT
326 GAGGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTAGAAAAGTATAAGTTCACCCCT
* * * *
130427 CAAATTAGACAAACAACGATTCTAGTAAGGATCTTCATTCATTTTGTGGTTAGGCATTACAAACA
391 CAAATGAGACAAACAACGATTCTAGTAAGGATCATCATTCATTTTGTGATTAGGCACTACAAACA
* * * * *
130492 CATTCTCCCCAATAGGATAAATGATATTGACGGTTTTCTTTTGCTTGGAAATTTTTTCTTTCTCT
456 CATTCTCCCCAATAGGATAAACGATATTGACGGTTTTCTTTTGCATGAAAATCTTTTCTTTCTAT
* * * *
130557 TATTTTTCTTAAAATCAAAGTTTGTACTTTAAATAAGACATGCATTAATTCTCGTAAAAGTCTCC
521 TATTTTCCATAAAATCAAAGTTTGTACTTTAAATAAGACAAGCATTAATTCGCGTAAAAGTCTCC
* * *
130622 ATTCTTTTCAAGATTGGGAACCAAAAACACATTCCTTTCATTAGGATATATGACATTAATTAGGC
586 ATTCTTTTCAAGATTGGAAACCAAAAACACATTCCCTTCATTAGGATACATGACATTAATTAGGC
130687 ATTATAAACATATTCTTCTCCTCAGGAAGCA
651 ATTATAAACATATTCTTCTCCTCAGGAAGCA
*
130718 TGATATTGAT-GGTTTTCTTTTGCATGAAAATCTTTT-CTTTGCCTCACTTTCCTTCAAATCAAA
1 TGATATTGATAGGTTTTCTTTTGCATGAAAAT-TTTTGCTTTGCCTCACTTTCCTTAAAATCAAA
* * * *
130781 GTTTGTACTTTAAAT-GAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGT
65 GTTTGCACTTTAAATAG-GACAAGCATTGATTCTCGTAAAAGTCTCCATTATTTCCAACATTGGG
* * *
130845 AACCAAACACACATTCTCTTCATTAGGATACATGACATTCATGCTTCGGTGTCGTAAGAGAAGCT
129 AACCAAAAACACATTCCCTTCATTAGGATACATGACATTCATGCTTCGGTGTCGCAAGAGAAGCT
** * *
130910 -TT-TCCTTCTAACGTTGTTGATAAAATCAAAGTTTGTCTCTTAAATAAGGCAAACTTGAATACT
194 GTTCTCC--CTAACGTCATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACT
* *
130973 CATACTAATCCACATTCTTTTCAAGATTAACCACCATAAACATAGTCTTTTTATAAGGATACATG
257 CATACTAATCCACATTCTTTTCAA-ATTAACCACCATAAACATAGTCTTCTCATAAGGATACATG
* * * * * * * *
131038 ATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTTCCCACCAGTTTTAGTAAATTCTAAGTTCG
321 ATATCGAGGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTAGAAAAGTATAAGTTCA
** * * *
131103 CCCCTCAAATGAGACAAACATGGATTCTAGTAGGGGTCATCATTCATTTTGTGATTAGGCACTAT
386 CCCCTCAAATGAGACAAACAACGATTCTAGTAAGGATCATCATTCATTTTGTGATTAGGCACTAC
* * *
131168 AAACACATTCTCCTCC-TTAGGATAAACGATATTGATGGTTTTCTTTTTCATGAAAATCTTTTCT
451 AAACACATTCTCC-CCAATAGGATAAACGATATTGACGGTTTTCTTTTGCATGAAAATCTTTTCT
*
131232 TTGC-ATTA-TTTCCATAAAATCAAAGTTTGTACTTTAAATGAA-ACAAGCATTGATTCGCGTAA
515 TT-CTATTATTTTCCATAAAATCAAAGTTTGTACTTTAAAT-AAGACAAGCATTAATTCGCGTAA
131294 AAGTCTCCATT-TTTTCCAAGATTGGAAACCAAAAACACATTCCCTTCATTAGGATACATGACAT
578 AAGTCTCCATTCTTTT-CAAGATTGGAAACCAAAAACACATTCCCTTCATTAGGATACATGACAT
131358 T
642 T
131359 GATGCTTTGG
Statistics
Matches: 553, Mismatches: 79, Indels: 19
0.85 0.12 0.03
Matches are distributed among these distances:
678 3 0.01
679 7 0.01
680 321 0.58
681 219 0.40
682 3 0.01
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (681 bp):
TGATATTGATAGGTTTTCTTTTGCATGAAAATTTTTGCTTTGCCTCACTTTCCTTAAAATCAAAG
TTTGCACTTTAAATAGGACAAGCATTGATTCTCGTAAAAGTCTCCATTATTTCCAACATTGGGAA
CCAAAAACACATTCCCTTCATTAGGATACATGACATTCATGCTTCGGTGTCGCAAGAGAAGCTGT
TCTCCCTAACGTCATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATA
CTAATCCACATTCTTTTCAAATTAACCACCATAAACATAGTCTTCTCATAAGGATACATGATATC
GAGGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTAGAAAAGTATAAGTTCACCCCT
CAAATGAGACAAACAACGATTCTAGTAAGGATCATCATTCATTTTGTGATTAGGCACTACAAACA
CATTCTCCCCAATAGGATAAACGATATTGACGGTTTTCTTTTGCATGAAAATCTTTTCTTTCTAT
TATTTTCCATAAAATCAAAGTTTGTACTTTAAATAAGACAAGCATTAATTCGCGTAAAAGTCTCC
ATTCTTTTCAAGATTGGAAACCAAAAACACATTCCCTTCATTAGGATACATGACATTAATTAGGC
ATTATAAACATATTCTTCTCCTCAGGAAGCA
Found at i:131416 original size:158 final size:158
Alignment explanation
Indices: 130773--131417 Score: 396
Period size: 158 Copynumber: 4.1 Consensus size: 158
130763 ACTTTCCTTC
* * *
130773 AAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAA
1 AAATCAAAGTTTGTACTTTAAATGAAACAAACATTGATTCTCGTAAAAGTCTCCATTCTTTTCAA
* * * * *
130838 GATTGGTAACCAAACACACATTCTCTTCATTAGGATACATGACATTCATGCTTCGGTGTCGTAAG
66 GATTGGAAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAG
*
130903 AGAAGCTTTTCCTTC-TAACGTTGTTGATA
131 AGAAGCTTTTCTTTCTTAA-GTT-TTGATA
* * * *
130932 AAATCAAAGTTTGT-CTCTTAAAT-AAGGCAAAC-TTGAATACTCATACTAA-TC-CACATTCTT
1 AAATCAAAGTTTGTACT-TTAAATGAA-ACAAACATTG-ATTCTCGTA-AAAGTCTC-CATTCTT
* * * ** * * * *
130992 TTCAAGATT--AACCACCATAAACATAGTCTTTTTATAAGGATACATGATATTGATGCTTTGGTT
61 TTCAAGATTGGAA--ACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTG
* * * **
131055 TTGCAAGA-AA-CACTTTC-TTCCCACCAGTTTT-AGTA
124 TCGTAAGAGAAGC-TTTTCTTTCTTA--AGTTTTGA-TA
* * * ** * * * * * ***
131090 AATTCTAAGTTCGCCCCTCAAATGAGACAAACATGGATTCTAGTAGGGGTCAT-CATTCATTTT-
1 AAATCAAAGTTTGTACTTTAAATGAAACAAACATTGATTCTCGTAAAAGTC-TCCATTC-TTTTC
** * * * * * * * * ** **
131153 GTGATTAGG-CACTATAAACACATTCTCC-TCCTTAGGATAAACGATATTGATGGTTTTCT-TTT
64 AAGATT-GGAAACCAAAAACACATTC-CCTTCATTAGGATACATGACATTGATGCTTTGGTGTCG
* * * **
131215 TCATGAAAATCTTTTCTTTGCATT-A-TTTCCATA
127 T-AAGAGAAGCTTTTCTTT-C-TTAAGTTTTGATA
* *
131248 AAATCAAAGTTTGTACTTTAAATGAAACAAGCATTGATTCGCGTAAAAGTCTCCATT-TTTTCCA
1 AAATCAAAGTTTGTACTTTAAATGAAACAAACATTGATTCTCGTAAAAGTCTCCATTCTTTT-CA
131312 AGATTGGAAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAA
65 AGATTGGAAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAA
131377 GAGAAGCTTTTCTTTCTTAAGTTGTTGATA
130 GAGAAGCTTTTCTTTCTTAAGTT-TTGATA
131407 AAATC-AAGTTT
1 AAATCAAAGTTT
131418 CTCTCTTAAA
Statistics
Matches: 352, Mismatches: 95, Indels: 79
0.67 0.18 0.15
Matches are distributed among these distances:
156 6 0.02
157 15 0.04
158 201 0.57
159 123 0.35
160 6 0.02
161 1 0.00
ACGTcount: A:0.32, C:0.18, G:0.14, T:0.36
Consensus pattern (158 bp):
AAATCAAAGTTTGTACTTTAAATGAAACAAACATTGATTCTCGTAAAAGTCTCCATTCTTTTCAA
GATTGGAAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAG
AGAAGCTTTTCTTTCTTAAGTTTTGATA
Found at i:131488 original size:158 final size:158
Alignment explanation
Indices: 130825--131488 Score: 362
Period size: 158 Copynumber: 4.2 Consensus size: 158
130815 GTAAAAGTCT
* * ** * *
130825 CCATTCTTTCCAAGATTGGTAACCA-AACACACATTCTCTTCATTAGGATACATGACATTCATGC
1 CCATTCTTTTCAAGATTAGCCACCATAA-ACACATTCCCTTCATTAGGATACATGACATTGATGC
* * *
130889 TTCGGTGTCGTAAGAGAAGCTTTTCCTTC-TAACGTTGTTGATAAAATCAAAGTTTGTCTCTTAA
65 TTTGGTGTCGTAAGAGAAGCTTTTCTTTCTTAA-GTT-TTGATAAAATCAAAGTTTCTCTCTTAA
* *
130953 ATAAGGCAAACTTGAATACTCATACTAATCC
128 ATAAGACAAACTTGAGTACTCATACTAATCC
* * * * ** * * *
130984 ACATTCTTTTCAAGATTAACCACCATAAACATAGTCTTTTTATAAGGATACATGATATTGATGCT
1 CCATTCTTTTCAAGATTAGCCACCATAAACACATTCCCTTCATTAGGATACATGACATTGATGCT
* * * * ** * * * * *
131049 TTGGTTTTGCAAGA-AA-CACTTTC-TTCCCACCAGTTTT-AGTAAATTCTAAG-TTCGCCCCTC
66 TTGGTGTCGTAAGAGAAGC-TTTTCTTTCTTA--AGTTTTGA-TAAAATCAAAGTTTC-TCTCTT
* * * * * *
131109 AAATGAGACAAACATG-G-ATTC-TAGTAGGGGTCA
126 AAATAAGACAAACTTGAGTACTCATACTA---ATCC
* ** * * * * * *
131142 TCATTCATTTT-GTGATTAGGCACTATAAACACATTCTCC-TCCTTAGGATAAACGATATTGATG
1 CCATTC-TTTTCAAGATTAGCCACCATAAACACATTC-CCTTCATTAGGATACATGACATTGATG
* ** ** * * * ** *
131205 GTTTTCT-TTTTCATGAAAATCTTTTCTTTGCATT-A-TTTCCATAAAATCAAAGTTTGTACT-T
64 CTTTGGTGTCGT-AAGAGAAGCTTTTCTTT-C-TTAAGTTTTGATAAAATCAAAGTTTCT-CTCT
* * * * * *
131266 TAAATGAA-ACAAGCATTGA-TTCGCGTA-AAAGTCT
125 TAAAT-AAGACAAAC-TTGAGTACTCATACTAA-TCC
* ** *
131300 CCATT-TTTTCCAAGATTGGAAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGC
1 CCATTCTTTT-CAAGATTAGCCACCATAAACACATTCCCTTCATTAGGATACATGACATTGATGC
131364 TTTGGTGTCGTAAGAGAAGCTTTTCTTTCTTAAGTTGTTGATAAAATC-AAGTTTCTCTCTTAAA
65 TTTGGTGTCGTAAGAGAAGCTTTTCTTTCTTAAGTT-TTGATAAAATCAAAGTTTCTCTCTTAAA
*
131428 TAAGGCAAACTTGAGTACTCATACTAATCC
129 TAAGACAAACTTGAGTACTCATACTAATCC
*
131458 CCATTCTTTTCAAGATTAGCCACCGTAAACA
1 CCATTCTTTTCAAGATTAGCCACCATAAACA
131489 TAGTCTTCTG
Statistics
Matches: 358, Mismatches: 108, Indels: 79
0.66 0.20 0.14
Matches are distributed among these distances:
155 4 0.01
156 9 0.03
157 21 0.06
158 216 0.60
159 97 0.27
160 8 0.02
161 3 0.01
ACGTcount: A:0.31, C:0.20, G:0.14, T:0.35
Consensus pattern (158 bp):
CCATTCTTTTCAAGATTAGCCACCATAAACACATTCCCTTCATTAGGATACATGACATTGATGCT
TTGGTGTCGTAAGAGAAGCTTTTCTTTCTTAAGTTTTGATAAAATCAAAGTTTCTCTCTTAAATA
AGACAAACTTGAGTACTCATACTAATCC
Found at i:131758 original size:474 final size:476
Alignment explanation
Indices: 130680--131761 Score: 1632
Period size: 474 Copynumber: 2.3 Consensus size: 476
130670 TATGACATTA
* * *
130680 ATTAGGCATTATAAACATATTCTTCTCCTCAGGAAGCATGATATTGATGGTTTTCTTTTGCATGA
1 ATTAGGCACTATAAACACATTCTTCTCCTCAGGATGCATGATATTGATGGTTTTCTTTTGCATGA
*
130745 AAATCTTTTCTTTGCCTCACTTTCCTTCAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGA
66 AAATCTTTTCTTTGCCTCACTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGA
* * * *
130810 TTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGTAACCAAACACACATTCTCTTCATTAGGATA
131 TTCGCGTAAAAGTCTCCATTCTTTCCAAGATTGGAAACCAAAAACACATTCCCTTCATTAGGATA
130875 CATGACATTCATGCTTCGGTGTCGTAAGAGAAGCTTTTCCTTCTAACGTTGTTGATAAAATCAAA
196 CATGACATTCATGCTTCGGTGTCGTAAGAGAAGCTTTTCCTTCTAACGTTGTTGATAAAATCAAA
*
130940 GTTTGTCTCTTAAATAAGGCAAACTTGAATACTCATACTAATCCACATTCTTTTCAAGATTAACC
261 GTTTCTCTCTTAAATAAGGCAAACTTGAATACTCATACTAATCCACATTCTTTTCAAGATTAACC
* * * * **
131005 ACCATAAACATAGTCTTTTTATAAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAACACTT
326 ACCATAAACATAGTCTTCTGATAAGGATACAAGATATTGATGATTTGGTTTCACAAGAAACACTT
* *
131070 TCTTCCCACCAGTTTTAGTAAATTCTAAGTTCGCCCCTCAAATGAGACAAACATGGATTCTAGTA
391 TCTTCCCACCAATTTTAGTAAATTCTAAGTTCACCCCTCAAATGAGACAAACATGGATTCTAGTA
* * *
131135 GGGGTCATCATTCATTTTGTG
456 AGGATCATCATTCATTTCGTG
* * ** * *
131156 ATTAGGCACTATAAACACATTCTCCTCCTTAGGATAAACGATATTGATGGTTTTCTTTTTCATGA
1 ATTAGGCACTATAAACACATTCTTCTCCTCAGGATGCATGATATTGATGGTTTTCTTTTGCATGA
* * * *
131221 AAATCTTTTCTTTGCATTA-TTTCCATAAAATCAAAGTTTGTACTTTAAATGAAACAAGCATTGA
66 AAATCTTTTCTTTGCCTCACTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGA
*
131285 TTCGCGTAAAAGTCTCCATTTTTTCCAAGATTGGAAACCAAAAACACATTCCCTTCATTAGGATA
131 TTCGCGTAAAAGTCTCCATTCTTTCCAAGATTGGAAACCAAAAACACATTCCCTTCATTAGGATA
* * *
131350 CATGACATTGATGCTTTGGTGTCGTAAGAGAAGCTTTTCTTTCTTAA-GTTGTTGATAAAATC-A
196 CATGACATTCATGCTTCGGTGTCGTAAGAGAAGCTTTTCCTTC-TAACGTTGTTGATAAAATCAA
* * *
131413 AGTTTCTCTCTTAAATAAGGCAAACTTGAGTACTCATACTAATCCCCATTCTTTTCAAGATTAGC
260 AGTTTCTCTCTTAAATAAGGCAAACTTGAATACTCATACTAATCCACATTCTTTTCAAGATTAAC
* * * * * *
131478 CACCGTAAACATAGTCTTCTGATACGGATACAAGATTTTGATGATTTGGTTTCACTAGGAACGCT
325 CACCATAAACATAGTCTTCTGATAAGGATACAAGATATTGATGATTTGGTTTCACAAGAAACACT
* * * * ** *
131543 TTTTTCCCA-CAATTTTTGTAGATTCTATGTTCATGCCTCAAATGAGATAAACATGGATTCTAGT
390 TTCTTCCCACCAATTTTAGTAAATTCTAAGTTCACCCCTCAAATGAGACAAACATGGATTCTAGT
131607 AAGGATCATCATTCATTTCGTG
455 AAGGATCATCATTCATTTCGTG
* *
131629 ATTAGGCACTATAAACACATTCTTCTCCTCAGGATGCATAATATTGATGGTTTTCTTTTGCATGG
1 ATTAGGCACTATAAACACATTCTTCTCCTCAGGATGCATGATATTGATGGTTTTCTTTTGCATGA
* * *
131694 AAATCTTTTTTTTGCCTCACTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGAGATGCATTGA
66 AAATCTTTTCTTTGCCTCACTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGA
131759 TTC
131 TTC
131762 TTTCTAACAT
Statistics
Matches: 539, Mismatches: 65, Indels: 6
0.88 0.11 0.01
Matches are distributed among these distances:
473 139 0.26
474 167 0.31
475 157 0.29
476 76 0.14
ACGTcount: A:0.30, C:0.19, G:0.14, T:0.37
Consensus pattern (476 bp):
ATTAGGCACTATAAACACATTCTTCTCCTCAGGATGCATGATATTGATGGTTTTCTTTTGCATGA
AAATCTTTTCTTTGCCTCACTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGA
TTCGCGTAAAAGTCTCCATTCTTTCCAAGATTGGAAACCAAAAACACATTCCCTTCATTAGGATA
CATGACATTCATGCTTCGGTGTCGTAAGAGAAGCTTTTCCTTCTAACGTTGTTGATAAAATCAAA
GTTTCTCTCTTAAATAAGGCAAACTTGAATACTCATACTAATCCACATTCTTTTCAAGATTAACC
ACCATAAACATAGTCTTCTGATAAGGATACAAGATATTGATGATTTGGTTTCACAAGAAACACTT
TCTTCCCACCAATTTTAGTAAATTCTAAGTTCACCCCTCAAATGAGACAAACATGGATTCTAGTA
AGGATCATCATTCATTTCGTG
Found at i:132727 original size:475 final size:469
Alignment explanation
Indices: 131812--133169 Score: 1666
Period size: 475 Copynumber: 2.8 Consensus size: 469
131802 GATACAAGAC
* * *
131812 ATTGATAGAATCAAAGTTTATCTCTTAAATAAGACAAACATGAATACTCATACTAATCCACATTC
1 ATTGATAGAATCAAAG-TTGTCTCTTAAATAAGACAAACGTGAATACTCATACTAATCCCCATTC
* * * * * *
131877 TTTTCTGGATTAGGCACCGTAAACAAATTCTTCTAATAAGGATATATGATATTGATGCTTTGGTT
65 TTTTCAGGATTAGGCACCATAAACATAGTCTT-TTATAAGGATACATGATATTGATGC-TTGGTT
* * * * * * * * *
131942 TCGCAAGAAACACTTTCATCCCACCAATTTTTTGTTAATTCAAATTTCGTGCCCTAAATGACATA
128 TCACAAGAAACGCTTTCTTCTCACCAA-TTTTTGTAAATT---ATTTCGTACTC-AAATGAGACA
* *
132007 AGCAAGGATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCA
188 AACAAGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCA
* * *
132072 TTCGGATAAACGATATTAATGGTTTTTTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTA
253 TTAGGATAAATGATATTAATGGTTTTTTTTTGCATGGAAATCTTTTCTTTGACTTATTTTCCTTA
* * * **
132137 AAATCAAAGTTTGTACTTTAAAAGAGACATGCGTTGATTTTCACAAAAGTCTCCATTCTTTTCAA
318 AAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAA
* *
132202 GATTGGGAACCAAAAACACATTCCTTTCAATAGGATACATGACATTGATGCTTTGGTGTCGCAAG
383 GATTGGGAACCAAAAACACATTCCCTTCAATAGGATACATGACATTGATGCCTTGGTGTCGCAAG
* *
132267 AGAAGCTTTTCTTTCCACCGTT
448 AGAAGCTTTTCTTCCCAACGTT
* * *
132289 GTTGATAGAATCAAAGTTGTCTGTTAAATAAGACAAACGTGAATACTCATACTAATCCCCATTCC
1 ATTGATAGAATCAAAGTTGTCTCTTAAATAAGACAAACGTGAATACTCATACTAATCCCCATTCT
*
132354 TTTCAGGATTAGGCACCATAAACATAGTCTTTTCATAAGGATACATGATCTTGATGCTGTGGTTT
66 TTTCAGGATTAGGCACCATAAACATAGTCTTTT-ATAAGGATACATGATATTGATGCT-TGGTTT
* *
132419 CACAGGATACGCTTTCTTCTCACCAATTTTTGTAAAGTATGAGTTTAC-TACTCAAATGAGACAA
129 CACAAGAAACGCTTTCTTCTCACCAATTTTTGTAAA-T-T-A-TTT-CGTACTCAAATGAGACAA
* * * * *
132483 ACATGGATTCTTGTAGGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTTTCCTCTT
189 ACAAGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCAT
* * * * *
132548 TAGGATAAATGATATTTATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGTCATATTTTCCTTAA
254 TAGGATAAATGATATTAATGGTTTTTTTTTGCATGGAAATCTTTTCTTTGACTTATTTTCCTTAA
* *
132613 AATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTTTTTTCAAC
319 AATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAG
* * * * *
132678 ATTGGGAACCAAAAACGCATTCCCTTCATTGGGATACGTTACATTGATGCCTTGGTGTCGCAAGA
384 ATTGGGAACCAAAAACACATTCCCTTCAATAGGATACATGACATTGATGCCTTGGTGTCGCAAGA
*
132743 GATGCTTTTCTTCCCAACGTT
449 GAAGCTTTTCTTCCCAACGTT
* * * * *
132764 ATCGATAAAATCAAAATTTGCCTCTTAAATAAGACAAA-GCTGAAAACTCATACTAAT-CCCATT
1 ATTGATAGAATC-AAAGTTGTCTCTTAAATAAGACAAACG-TGAATACTCATACTAATCCCCATT
* * ** * * *
132827 CTTTTTAGGATTAGGCACCATTAACATAGTCTTCTTATACA-GATACGGGATATCGATGAATTAG
64 CTTTTCAGGATTAGGCACCATAAACATAGTCTT-TTATA-AGGATACATGATATTGATG-CTTGG
* * *
132891 TTTCACAAGAAAAGCTTGT-TTCTCA-TAATTTTTGTAAATTCTATGTTCGTGCCTCAAATGAGA
126 TTTCACAAGAAACGCTT-TCTTCTCACCAATTTTTGTAAA-T-TAT-TTCGT-ACTCAAATGAGA
* * * * *
132954 CAAACACGAATTCTAGTAAGGATCTTCATTCACTTCGTGATTAGGCATTATAAACACATACTCCT
186 CAAACAAGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCT
* *
133019 CATTAGGATAAATGATATTGATGGTTTTTTTTTTTTTGCATGGAAATCTTTTCTTTGACTTGTTT
251 CATTAGGATAAATGATATTAATGG----TTTTTTTTTGCATGGAAATCTTTTCTTTGACTTATTT
* * * * *
133084 CCCTTAAAATCAAAGTTTGCACTTTAAATGAGACATGCATTGATTCCCGTAAAAGACTCCATTCC
312 TCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCT
133149 TTTCAAGATTGGGAACCAAAA
377 TTTCAAGATTGGGAACCAAAA
133170 GCTGTTCTCC
Statistics
Matches: 761, Mismatches: 101, Indels: 37
0.85 0.11 0.04
Matches are distributed among these distances:
472 2 0.00
473 4 0.01
474 104 0.14
475 355 0.47
476 168 0.22
477 17 0.02
478 111 0.15
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.36
Consensus pattern (469 bp):
ATTGATAGAATCAAAGTTGTCTCTTAAATAAGACAAACGTGAATACTCATACTAATCCCCATTCT
TTTCAGGATTAGGCACCATAAACATAGTCTTTTATAAGGATACATGATATTGATGCTTGGTTTCA
CAAGAAACGCTTTCTTCTCACCAATTTTTGTAAATTATTTCGTACTCAAATGAGACAAACAAGGA
TTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATA
AATGATATTAATGGTTTTTTTTTGCATGGAAATCTTTTCTTTGACTTATTTTCCTTAAAATCAAA
GTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGA
ACCAAAAACACATTCCCTTCAATAGGATACATGACATTGATGCCTTGGTGTCGCAAGAGAAGCTT
TTCTTCCCAACGTT
Found at i:134059 original size:475 final size:476
Alignment explanation
Indices: 133168--135015 Score: 2428
Period size: 475 Copynumber: 3.9 Consensus size: 476
133158 TGGGAACCAA
* * * *
133168 AAGCTGTTCTCCCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATGAGACGAACATGAAT
1 AAGCTGTTCTCCCCACCGTTGTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAAT
* *
133233 AATCATACTAATCCACTTTCTTTTCT-AGATTAGGCACCATAAACATAGTCTTCTCATAAGGATA
66 AGTCATACTAATCCGCTTTCTTTTCTGA-ATTAGGCACCATAAACATAGTCTTCTCATAAGGATA
* * *
133297 CATGTTGTCGATGCTTTGGTTTCGTAAGAAACGCTTTCTTCCCACCAATTTTTGATAAGCATAAG
130 CATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTTCTTCCCACCAATTTTTGAAAAGCATAAG
* * * *
133362 TTCATTCCTCAAATTAGACAAACAAGGATTCTGGTAAGGATCTTCATTCTTTTCGTGGTTAGGCA
195 TTCGTTCCTCAAATGAGACAAACAAGGATTCTAGTAAGGATCTTCATTCATTTCGTGGTTAGGCA
* * * * *
133427 TTATAAACACAATCTCCCTAATAGGATAAATGTTATTGATGGTTTTCTTTTGCCTGGAAAT-TTT
260 CTATAAACACATTCTCCCCAATAGGATAAATGATATTGATGGTTTTCTTTTGCCTGAAAATCTTT
* * * * * *
133491 TTCTTTGTCTTATTTTTCTTAAAATCAAAGTTTGCACTTTAAAAAAGACATGCACTGATTTTCGT
325 TT-TTTCTCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATAAGACATGCATTGATTCTCGT
*
133556 AAAAGTCTCCATTCTTTTCAATATTGGGAGCCAAAAACACATTCCCTTCATTAGGATACATGACA
389 AAAAGTCTCCATTCTTTTCAACATTGGGAGCCAAAAACACATTCCCTTCATTAGGATACATGACA
133621 TTGATGCTTTGGTGTCGCAAGAG
454 TTGATGCTTTGGTGTCGCAAGAG
** * *
133644 AAGCTGTTCTCCCCACCGTCATTGATTGAATCAAAGTTTGTCTCTTAAATAAGATAAACATGAAT
1 AAGCTGTTCTCCCCACCGTTGTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAAT
*
133709 AGTCATACTAATCCGCTTTCTTTTCT-AATTAGGCACCATAGACATAGTCTTCTCATAAGGATAC
66 AGTCATACTAATCCGCTTTCTTTTCTGAATTAGGCACCATAAACATAGTCTTCTCATAAGGATAC
* *
133773 ATGATATCGATGCTTTGGTTTCGTAAGAAATGCTTTTTTCCCACCAATTTTTGAAAAGCATAAGT
131 ATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTTCTTCCCACCAATTTTTGAAAAGCATAAGT
* * *
133838 TCGTTCCTCAAATTAGACAAACAACGATTCTAGTAAGGATCTTCATTCATTTCGTGGTTAGGCAT
196 TCGTTCCTCAAATGAGACAAACAAGGATTCTAGTAAGGATCTTCATTCATTTCGTGGTTAGGCAC
* * *
133903 TATAAACACATTCTCCCCAATAGGATAAATGATATTGACGGTTTTCTTTTGCTTG-GAAT-TTTT
261 TATAAACACATTCTCCCCAATAGGATAAATGATATTGATGGTTTTCTTTTGCCTGAAAATCTTTT
* *
133966 TTAATCATCTTATTTTTCTTAAAATCAAAGTTTGTACTTTAAATAAGACATGCATTGATTCTCGT
326 TT-TTC-TCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATAAGACATGCATTGATTCTCGT
* * * *
134031 AAAAGTCTCCATTCTTTTTAACATTGGGAGCCAAAAACACATTCCCTGCCTTAGGATACATAACA
389 AAAAGTCTCCATTCTTTTCAACATTGGGAGCCAAAAACACATTCCCTTCATTAGGATACATGACA
** * *
134096 TTGATGCTTTGGCATCACTAGAG
454 TTGATGCTTTGGTGTCGCAAGAG
*
134119 AAGCTGTTCTCCCCACCGTTGTTGATAGAATCAAAGTTTGTCTCTGAAATAAGACAAACATGAAT
1 AAGCTGTTCTCCCCACCGTTGTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAAT
* *
134184 AGTCATAGTAATCCGCTTTCTTTTCTGGATTAGGCACCATAAAC--AGTCTTCTCATAAGGATAC
66 AGTCATACTAATCCGCTTTCTTTTCTGAATTAGGCACCATAAACATAGTCTTCTCATAAGGATAC
* ** * * * *
134247 ATGATATCTATGCTTCAGCTTCGTAAGAAACGCATTCTTCCCGCCAATTTTTGAAAAGTATAAGT
131 ATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTTCTTCCCACCAATTTTTGAAAAGCATAAGT
*
134312 TCGTTCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGGTTAGGCAC
196 TCGTTCCTCAAATGAGACAAACAAGGATTCTAGTAAGGATCTTCATTCATTTCGTGGTTAGGCAC
*
134377 TATAAACACATTCTCCCCAATAGGATAAATGATATTGATGGTTTTCTTTTACCTGAAAATCTTTT
261 TATAAACACATTCTCCCCAATAGGATAAATGATATTGATGGTTTTCTTTTGCCTGAAAATCTTTT
* *
134442 TTTTGC-CTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTA
326 TTTT-CTCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATAAGACATGCATTGATTCTCGTA
** * * * * * *
134506 AAACCCTCTATTCTTTCCAAGATTGGGAACCAAAAACACATTCCCTTTATTAGGACACATGACAT
390 AAAGTCTCCATTCTTTTCAACATTGGGAGCCAAAAACACATTCCCTTCATTAGGATACATGACAT
* * * *
134571 TAATACTTCGATGTCGCAAGAG
455 TGATGCTTTGGTGTCGCAAGAG
* * * * * * ** *
134593 AAGCTTGTCCT-TCTAACGTTGTTGATAAAATCAAAGTTTATCTCTTAAATAAGGTAAACTTGAA
1 AAGC-TGTTCTCCCCACCGTTGTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAA
* * * * ** *
134657 TACTCATACTAATCC-ATATTCTTTTTTGGATTAACCACCATAAACATAGTCTTTTCATAAGGAT
65 TAGTCATACTAATCCGCT-TTCTTTTCTGAATTAGGCACCATAAACATAGTCTTCTCATAAGGAT
* * * **
134721 ACATGATATTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTGTAAATTC-TA
129 ACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTTCTTCCCACCAATTTTTG-AAAAGCATA
* * * * ** *
134785 AGTTCGTGCC-CTAAATGAGACAAACATGGATTCTAGTAGGGGTCTTCCGTCATTTCGTGATTAG
193 AGTTCGTTCCTC-AAATGAGACAAACAAGGATTCTAGTAAGGATCTTCATTCATTTCGTGGTTAG
* * * * *
134849 GCACTACAACCACATTCTCCTCATTAGGATAAATGATATTGAT-GTTTTCCTTTTGCATGAAAAT
257 GCACTATAAACACATTCTCCCCAATAGGATAAATGATATTGATGGTTTT-CTTTTGCCTGAAAAT
* * * * * * * *
134913 CTTTTCTTTCCCTTA-TTTCCATAAAATCGAAGTTTGTACTTTAAATGAGACCTGCATTAATTCC
321 CTTTTTTTTCTCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATAAGACATGCATTGATTCT
* * * * *
134977 CGTAAAAGACTCCATTCCTTCCAAGATTGGGAACCAAAA
386 CGTAAAAGTCTCCATTCTTTTCAACATTGGGAGCCAAAA
135016 GCTGTTCTCC
Statistics
Matches: 1217, Mismatches: 141, Indels: 29
0.88 0.10 0.02
Matches are distributed among these distances:
473 2 0.00
474 404 0.33
475 519 0.43
476 289 0.24
477 3 0.00
ACGTcount: A:0.31, C:0.19, G:0.15, T:0.35
Consensus pattern (476 bp):
AAGCTGTTCTCCCCACCGTTGTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAAT
AGTCATACTAATCCGCTTTCTTTTCTGAATTAGGCACCATAAACATAGTCTTCTCATAAGGATAC
ATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTTCTTCCCACCAATTTTTGAAAAGCATAAGT
TCGTTCCTCAAATGAGACAAACAAGGATTCTAGTAAGGATCTTCATTCATTTCGTGGTTAGGCAC
TATAAACACATTCTCCCCAATAGGATAAATGATATTGATGGTTTTCTTTTGCCTGAAAATCTTTT
TTTTCTCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATAAGACATGCATTGATTCTCGTAA
AAGTCTCCATTCTTTTCAACATTGGGAGCCAAAAACACATTCCCTTCATTAGGATACATGACATT
GATGCTTTGGTGTCGCAAGAG
Found at i:136090 original size:476 final size:472
Alignment explanation
Indices: 135030--136582 Score: 1847
Period size: 476 Copynumber: 3.3 Consensus size: 472
135020 TTCTCCCCAC
* * * *
135030 CGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATGAGACAAACATGAATAGTCATACTAATCCAC
1 CGTTGTTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCA-
* * * * *
135095 TTTCTTTTCTAGATTCGA-CACCATAAACATAGTTTTCTCATAAGGATACATGTTGTCGATGCTT
65 TTTCTTTTCTAGATT-AACCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGC-T
* *
135159 TGGTTTCGTAAGAAACGCTTTCTTCCCACCAATTTTTGATAAACATAAGTTCATTCCTCAAATTA
128 TGGTTTCGTAAGAAACGCTTTCTTCCCACCAATTTTTGA-AAATATAAGTTCATTCCTCAAATGA
* * *
135224 GACAAACAAGGATTCTAGTAAGGATCTTCATTCTTTTCGTGGTTAGGCATTATAAACACATTCTC
192 GACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGGTTAGGCACTATAAACACATTCTC
* * * * * * *
135289 TCCAATAGGATAATTGATATTGATAGTTTTTTTTTTTTGCCTAGAAAT-TTTTGCTTTGTCATAT
257 CCCAATAGGATAAATGATATT-A-A-TGTTTTTCTTTTGCCTGGAAATCTTTT-CTTTGCCTTAT
* * * * **
135353 TTTTCTTAAAATCAAAGTTTGCACTTTAAAT-AGGACATGCATTGATTTTCGTTAAAGTCTCCAT
318 TTTCCTTAAAATCAAAGTTTGCACTTTAAATGA-GACAAGCATTGATTATCGTAAAACCCTCCAT
* * * * *
135417 TCTTTTCAACATTGGGAGCCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGG
382 TCTTTCCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGC-TTGA
** * *
135482 TGTCGCAAGAGAAG-TTGTTCTCCCCAC
446 TGTCGCAAGAGAAGCTT-TTCTTTCTAA
** ** * *
135509 CGTCATTGATTGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCGC
1 CGTTGTTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCC-A
**
135574 TTTCTTTTCT-GATTAGGCACCATAAAC--AGTCTTCTCATAAGGATACATGATATTGATGCTTC
65 TTTCTTTTCTAGATTAACCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTT-
* * * * * * *
135636 AGCTTCATAAGTAATGCTTTCTTCCCGCCAATTATTGAAAAGTATAAGTTCATTCCTCAAATGAG
129 GGTTTCGTAAGAAACGCTTTCTTCCCACCAATTTTTGAAAA-TATAAGTTCATTCCTCAAATGAG
*
135701 ACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGGTTAGGCACTATAAATACATTCTCC
193 ACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGGTTAGGCACTATAAACACATTCTCC
* * *
135766 CCAATAGGATAAATGATATTAATGGTTTTCTTTTCCCTGGAAATCTTTTTTTTGCCTTATTTTCC
258 CCAATAGGATAAATGATATTAATGTTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCC
* * * *
135831 TTAAAATCAATGTTTGTACTTTAAATGAGACAAGCATAGATTATCGTAAAACCCTCCATTCCTTC
323 TTAAAATCAAAGTTTGCACTTTAAATGAGACAAGCATTGATTATCGTAAAACCCTCCATTCTTTC
* * * *
135896 CAAGATTAGGAACCAAAAACACATTCCCTTCCTTAGGACACATGACATTGATACTTCGATGTCGC
388 CAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTT-GATGTCGC
135961 AAGAGAAGCTTTTCTTTCTAA
452 AAGAGAAGCTTTTCTTTCTAA
* * *
135982 CGTTGTTGATAAAATCAAAGTTTATCTCTTAAATAAGATAAACTTGAATACTCATACTAATCCAT
1 CGTTGTTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCAT
*
136047 ATTCTTTT-TAGGATTAACCACCATAAACATAGTCTTTTCATAAGGATACATGATATTGATGCTA
66 -TTCTTTTCTA-GATTAACCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCT-
* * * * * * *
136111 TGGTTTTGCAAGAAACACTTTCTTCCCACCAATTTTTGTAAATTCTAAGTTCGTGCC-CTAAATG
128 TGGTTTCGTAAGAAACGCTTTCTTCCCACCAATTTTTG-AAAATATAAGTTCATTCCTC-AAATG
* * * * *
136175 AGACAAACATGTATTCTAGTAGGGGTCTTCATTCATTTCGTGATTAGGCACTACAAACACATTCT
191 AGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGGTTAGGCACTATAAACACATTCT
* * * * * * *
136240 CCTCATTAGGATAAATGATATTGATGTTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTCAGTTT
256 CCCCAATAGGATAAATGATATTAATGTTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTT
** * *
136305 CCTTAAAATCAAAGTTTGCACTTTAAATGTTATAAGCATTGATTCTCGTAAAAGTCCCT--ATTC
321 CCTTAAAATCAAAGTTTGCACTTTAAATGAGACAAGCATTGATTATCGTAAAA--CCCTCCATTC
* * *
136368 TTTCCAAGATTGGGAACCAAAAACACATTCTCTTCTTTAGGATACATGACATTGATGCTTTAGTG
384 TTTCCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTGA-TG
136433 TCGCAAGAGAAGC-TTTCTTTCTAA
448 TCGCAAGAGAAGCTTTTCTTTCTAA
* * * * *
136457 CGTTGCTGATAAAATCAAAGTTTGTCTCTTAAAGAAGGCAAACTTGAATACTCATACTAGTCCCC
1 CGTTGTTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAAT--CC
* * * * *
136522 ATTT-TTTTC-AGGATTAGCCACCATAAATATAGTCTTCTGATACGGATACAGGATATTGATG
64 ATTTCTTTTCTA-GATTAACCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATG
136583 ATTTGTTTTT
Statistics
Matches: 927, Mismatches: 125, Indels: 48
0.84 0.11 0.04
Matches are distributed among these distances:
472 4 0.00
473 212 0.23
474 23 0.02
475 124 0.13
476 469 0.51
477 8 0.01
478 18 0.02
479 69 0.07
ACGTcount: A:0.31, C:0.19, G:0.14, T:0.36
Consensus pattern (472 bp):
CGTTGTTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCAT
TTCTTTTCTAGATTAACCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTGG
TTTCGTAAGAAACGCTTTCTTCCCACCAATTTTTGAAAATATAAGTTCATTCCTCAAATGAGACA
AACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGGTTAGGCACTATAAACACATTCTCCCCA
ATAGGATAAATGATATTAATGTTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTA
AAATCAAAGTTTGCACTTTAAATGAGACAAGCATTGATTATCGTAAAACCCTCCATTCTTTCCAA
GATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTGATGTCGCAAGA
GAAGCTTTTCTTTCTAA
Found at i:138042 original size:475 final size:474
Alignment explanation
Indices: 136625--139233 Score: 3308
Period size: 475 Copynumber: 5.5 Consensus size: 474
136615 AATTTTTGTA
* * * *
136625 GATTCTAGTAAGGATCATCATTCATTTCGTGATTAGGCACTATAAACACATTCTTCTCCTCAGGA
1 GATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGA
** * *
136690 TGCATGATATTGATGGTTTTCTTTTGCATGGAAATCTTCTCTTTGCCTCAATTTCCTTAAAATCA
66 TAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTAATTTCCTTAAAATCA
* * *
136755 AAGTTTGTACTTTAAATGTGATAAGCATTGATTCTCGTAAAAGTC-CCTATTATTTCCAAGATTG
131 AAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCC-ATTCTTTCCAAGATTG
* * * * *
136819 TGAACCAAAAACACATTCTCTTCTTTAGGATACATGACATTGATGCTTCGGTGTCGTAAGAGAAG
195 GGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAG
* * * *
136884 --TTTCTTTCTAATGTTGTTGATAAAATCAAAGTTTATCTCTTAAATAAGGTAAACTTGAATACT
260 CTTTTCTTTCTAACGTTGATGATAAAATCAAAGTTTGTCTCTTAAATAAGG-AAACATGAATACT
* * * * * * *
136947 CATACTAATCCACATTCTTTTCAGGATTAACAACTATAAACATAGTCTTTTCATAAGGATACATG
324 CATACTAATCC-CTTTCTTTTCAGGATTAGCCACCATAAACATAGTCTTCTCATACGGATACAAG
* ** * * *
137012 ATATTGATGCTTTGGTTTTGCAAGAAACACATTCTTCCCACCAATTTTTGTAAATTCTAAGTTCG
388 ATATTGATGATTTGGTTTCACTAGAAACACTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTCG
* * *
137077 TGCCCCAAATGAGACACACATG
453 TGCCTCAAATAAGACAAACATG
* * * *
137099 GATTCTAGTAGGGGTCTTCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCATTTGGA
1 GATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGA
* * *
137164 TAAATGATATTGATGTTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTT-ATTTCCTTAAAATCG
66 TAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTAATTTCCTTAAAATCA
* * * * *
137228 ATGTTTGTACTTTACATGAGACAAGCATTGACTT-GCGTAAAAGTCTCCATTTTTTCCAAGATTA
131 AAGTTTGTACTTTAAATGAGACAAGCATTGA-TTCTCGTAAAAGTCTCCATTCTTTCCAAGATTG
* **
137292 GGAACCAAAAACACATTCCCTTCATTAGGATACATTACATTGATATTTTGGTGTCGCAAGAGAAG
195 GGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAG
* * *
137357 CTTTTCTTTCTAACGTTGTTGATAAAATC-AAGTTTATCTCTTAAATAAGGCAAACCTGAATACT
260 CTTTTCTTTCTAACGTTGATGATAAAATCAAAGTTTGTCTCTTAAATAAGG-AAACATGAATACT
* * * * *
137421 CATACTAATCCCCATTCTCTTCAGGATTAGCCACCATAAACATAGTCTTCTGATATGGATACAGG
324 CATACTAAT-CCCTTTCTTTTCAGGATTAGCCACCATAAACATAGTCTTCTCATACGGATACAAG
* * * * * * * **
137486 ATATTGACGATTTGGTTTCACTAGGAACGCTTTTTTCCTA-TAATTTTTGTAGATTTTATTTTCG
388 ATATTGATGATTTGGTTTCACTAGAAACACTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTCG
137550 TGCCTCAAATAAGACAAACATG
453 TGCCTCAAATAAGACAAACATG
* * * * * * *
137572 GATTCTAGTGAGGATCATCATTCATTTCGTGATTAGGCACTATAAACACATTCTTCACCTCAAGA
1 GATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGA
** * * *
137637 TGCATGATATTGATGGTCTTCTTTTGCATGGAAATATTTTCTTTGCCTTAATGTCCTTAAAATCA
66 TAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTAATTTCCTTAAAATCA
** * * *
137702 AACCTTGTACTTTAAATGTGACAAGCATTAATTCTCGTAAAAGTTTCCATTCTTTCCAAGATTGG
131 AAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGG
* *
137767 GAACCAAAAACACATTCTCTTCATTAGGATACATGACATTGATGCTTTAGTGTCGCAAGAGAAGC
196 GAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGC
* * *
137832 TTTTCTTTCTAACGTTGCTGATAAAATCAAAGTTTGTCTCTTAAATAAGGCAAACTTAAATACTC
261 TTTTCTTTCTAACGTTGATGATAAAATCAAAGTTTGTCTCTTAAATAAGG-AAACATGAATACTC
* * * *
137897 ATACTAATCCTCTTTCTTTCCAAGATTAGCCACCATAAACATAGTCTTCTGATACGGATACAGGA
325 ATACTAATCC-CTTTCTTTTCAGGATTAGCCACCATAAACATAGTCTTCTCATACGGATACAAGA
* * ** * * *
137962 TATTGATGATTTGGTTTCCCTAGGAATGCTTTTTTCCCA-CATTTTTTGTAGATTCTATGTTCGT
389 TATTGATGATTTGGTTTCACTAGAAACACTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTCGT
*
138026 GCCTCAAATGAGACAAACATG
454 GCCTCAAATAAGACAAACATG
* * *
138047 GATTCTAGTAAAGATCTTCATTCATTTCGTGATTAGGCACTACAAACACGTTCTCCTCATTAGGA
1 GATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGA
* * * * *
138112 TAAGTGGTATTGATGGTTTTCTTTTGCATGGAAATCTTCTCTTTTCCTTATTTTCCTTAAAATCA
66 TAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTAATTTCCTTAAAATCA
* * * *
138177 AAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCATAAAAGTTTACATTCTTTCCAAGATTAG
131 AAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGG
* * * *
138242 GAACCAAAAACACATTCCCTTCATTAGGATACATGACATTCATGCTTTTGCT-TTGCAGGAGAAG
196 GAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGC-TTTGGTGTCGCAAGAGAAG
** * * *
138306 CTTTTC-TTCCCACTGTTAATGATAAAATCAAAATTTGTCCCTTAAATAAGAGAAACATGAATA-
260 CTTTTCTTTCTAAC-GTTGATGATAAAATCAAAGTTTGTCTCTTAAATAAG-GAAACATGAATAC
* * * *
138369 TCATACTAATTCCCTTTTTTTTCAGGATTAGGCACCCTAAACATAGTCTTCTCTTACGGATACAA
323 TCATACTAA-TCCCTTTCTTTTCAGGATTAGCCACCATAAACATAGTCTTCTCATACGGATACAA
* * * * *
138434 GATATTGACGATTTAGTTTCACAAGAAACATTTTTTTCCCACCAATTTTTGAAAATTCTAAGTTC
387 GATATTGATGATTTGGTTTCACTAGAAACACTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTC
*
138499 GTGCCTCAAATAAGACAAACATA
452 GTGCCTCAAATAAGACAAACATG
* *
138522 GATTCTAGTAAGGATCTTTATTCATTTCGGGATTAGGCACTATAAACACATTCTCCTCATTAGGA
1 GATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGA
* * * * * *
138587 TAAAAGATATTGATGGTTTTC-TTTGCATGGAAATCTTTTCTTTACCTCATTTTTCGTAAAATCA
66 TAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTAATTTCCTTAAAATCA
* *
138651 AAGTTAGTACTTTAAATGAGACAAGCATTGATTCTCGTAATAGTCTCCATTCTTTCCAAGATTGG
131 AAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGG
* * * * * *
138716 GAACCAAAAACACATTCTCTTCATTAGGATGCACGACATTGATGCTTTTGCT-TTGTAAGAGAAG
196 GAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGC-TTTGGTGTCGCAAGAGAAG
* * * * * * *
138780 CTTTTCTTTCCACCGTTAATAATAAAATCAAAATTTGTCCCTTAAAAAAGAGAAACATGAATACT
260 CTTTTCTTTCTAACGTTGATGATAAAATCAAAGTTTGTCTCTTAAATAAG-GAAACATGAATACT
* * * * * *
138845 CATACTAATTCCCATTT-TTTTTAGGATTAGGCACCCTAAACATAGTCTTTTCTTACAGATACAA
324 CATACTAA-TCCC-TTTCTTTTCAGGATTAGCCACCATAAACATAGTCTTCTCATACGGATACAA
* * * **
138909 GATATTGATCATTTAGTTTC-GTAAGAAACTTTTTTTTCCCACCAATTTTTGTAAATTCTAAGTT
387 GATATTGATGATTTGGTTTCACT-AGAAACACTTTTTTCCCACCAATTTTTGTAAATTCTAAGTT
*
138973 CGTGCCTCAAATAAGACAAACATA
451 CGTGCCTCAAATAAGACAAACATG
* * * * *
138997 GATTCTAATAAAGATTTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCCCATTAGGA
1 GATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGA
* *
139062 TAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTACCTGT--TTTCCGTAAAATC
66 TAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCT-TAATTTCCTTAAAATC
* * * *
139125 AAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCATAAAAGTCTCCATTCTTTCTAATATTG
130 AAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTG
* *
139190 GGAACCAAGAACACATTCCCTTTATTAGGATACATGACATTGAT
195 GGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGAT
139234 AGAATCGAAG
Statistics
Matches: 1882, Mismatches: 233, Indels: 39
0.87 0.11 0.02
Matches are distributed among these distances:
473 259 0.14
474 674 0.36
475 915 0.49
476 34 0.02
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (474 bp):
GATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGA
TAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTAATTTCCTTAAAATCA
AAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGG
GAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGC
TTTTCTTTCTAACGTTGATGATAAAATCAAAGTTTGTCTCTTAAATAAGGAAACATGAATACTCA
TACTAATCCCTTTCTTTTCAGGATTAGCCACCATAAACATAGTCTTCTCATACGGATACAAGATA
TTGATGATTTGGTTTCACTAGAAACACTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTCGTGC
CTCAAATAAGACAAACATG
Found at i:138471 original size:949 final size:946
Alignment explanation
Indices: 136623--149625 Score: 10871
Period size: 951 Copynumber: 13.7 Consensus size: 946
136613 ACAATTTTTG
136623 TAGATTCTAGTAAGGATCATCATTCATTTCGTGATTAGGCACTATAAACACATTCTTCTCCTCAG
1 TAGATTCTAGTAAGGATCATCATTCATTTCGTGATTAGGCACTATAAACACATTCTTCTCCTCAG
*
136688 GATGCATGATATTGATGGTTTTCTTTTGCATGGAAATCTTCTCTTTGCCTCAATTTCCTTAAAAT
66 GATGCATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTCAATTTCCTTAAAAT
* * * *
136753 CAAAGTTTGTACTTTAAATGTGATAAGCATTGATTCTCGTAAAAG-TCCCTATTATTTCCAAGAT
131 CAAA-CTTGTACTTTAAATGTGACAAGCATTGATTCTCGTAAAAGTTTCC-ATTCTTTCCAAGAT
* * **
136817 TGTGAACCAAAAACACATTCTCTTCTTTAGGATACATGACATTGATGCTTCGGTGTCGTAAGAGA
194 TGGGAACCAAAAACACATTCTCTTCATTAGGATACATGACATTGATGCTTTAGTGTCGTAAGAGA
* * *
136882 AG--TTTCTTTCTAATGTTGTTGATAAAATCAAAGTTTATCTCTTAAATAAGGTAAACTTGAATA
259 AGCTTTTCTTTCTAACGTTGATGATAAAATCAAAGTTTGTCTCTTAAATAAGG-AAACTTGAATA
* * * * *
136945 CTCATACTAATCCACATTCTTTTCAGGATTAACAACTATAAACATAGTCTTTTCATAAGGATACA
323 CTCATACTAATCC-CTTTCTTTTCAGGATTAGCCACCATAAACATAGTCTTTTCATACGGATACA
* * * * * * *
137010 TGATATTGATGCTTTGGTTTTGCAAGAAACACATTCTTCCCACCAATTTTTGTAAATTCTAAGTT
387 AGATATTGATGATTTGG-TTTCCTAGAAA-TCTTTTTTCCCACCAATTTTTGTAAATTCTAAGTT
* * ** * *
137075 CGTGCCCCAAATGAGACACACATGGATTCTAGTAGGGGTCTTCATTCATTTCATGATTAGGCACT
450 CGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTCATTCATTTCGTGATTAGGCACT
* * *
137140 ATAAACACATTCTCCTCATTTGGATAAATGATATTGATGTTTTTCTTTTGCATGAAAATCTTTTC
515 ATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTC
* * * * * *
137205 TTTGCCTTA-TTTCCTTAAAATCGATGTTTGTACTTTACATGAGACAAGCATTGACTT-GCGTAA
580 TTTACCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGA-TTCTCATAA
* *
137268 AAGTCTCCATTTTTTCCAAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATTACATT
644 AAGTCTCCATTCTTTCCAAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATT
* * * ** * *
137333 GATATTTTGGTGTCGCAAGAGAAGCTTTTCTTTCTAACGTTGTTGATAAAATCAAGTTTATCTCT
709 CATATTTTGCTGTCGCAAGAGAAGCTTTTCTTTCCAACGTTAATGATAAAATCAAATTTATCCCT
*
137398 TAAATAAGGCAAACCTGAATACTCATACTAATCCCCATTCTCTTCAGGATTAGCCACCATAAACA
774 TAAATAAGGCAAACATGAATACTCATACTAATCCCCATTCTCTTCAGGATTAGCCACCATAAACA
* * * * * * * * *
137463 TAGTCTTCTGATATGGATACAGGATATTGACGATTTGGTTTCACTAGGAACGCTTTTTTCCTA-T
839 TAGTCTTCTCATACGGATACAAGATATTGACGATTTAGTTTCACAAGAAACACTTTTTTCCCACC
* * * **
137527 AATTTTTGTAGATTTTATTTTCGTGCCTCAAATAAGACAAACA
904 AATTTTTGAAAATTCTAAGTTCGTGCCTCAAATAAGACAAACA
* * * *
137570 TGGATTCTAGTGAGGATCATCATTCATTTCGTGATTAGGCACTATAAACACATTCTTCACCTCAA
1 TAGATTCTAGTAAGGATCATCATTCATTTCGTGATTAGGCACTATAAACACATTCTTCTCCTCAG
* * * *
137635 GATGCATGATATTGATGGTCTTCTTTTGCATGGAAATATTTTCTTTGCCTTAATGTCCTTAAAAT
66 GATGCATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTCAATTTCCTTAAAAT
*
137700 CAAACCTTGTACTTTAAATGTGACAAGCATTAATTCTCGTAAAAGTTTCCATTCTTTCCAAGATT
131 CAAA-CTTGTACTTTAAATGTGACAAGCATTGATTCTCGTAAAAGTTTCCATTCTTTCCAAGATT
*
137765 GGGAACCAAAAACACATTCTCTTCATTAGGATACATGACATTGATGCTTTAGTGTCGCAAGAGAA
195 GGGAACCAAAAACACATTCTCTTCATTAGGATACATGACATTGATGCTTTAGTGTCGTAAGAGAA
* *
137830 GCTTTTCTTTCTAACGTTGCTGATAAAATCAAAGTTTGTCTCTTAAATAAGGCAAACTTAAATAC
260 GCTTTTCTTTCTAACGTTGATGATAAAATCAAAGTTTGTCTCTTAAATAAGG-AAACTTGAATAC
* * * * *
137895 TCATACTAATCCTCTTTCTTTCCAAGATTAGCCACCATAAACATAGTCTTCTGATACGGATACAG
324 TCATACTAATCC-CTTTCTTTTCAGGATTAGCCACCATAAACATAGTCTTTTCATACGGATACAA
* * * *
137960 GATATTGATGATTTGGTTTCCCTAGGAATGCTTTTTTCCCA-CATTTTTTGTAGATTCTATGTTC
388 GATATTGATGATTTGGTTT-CCTAGAAAT-CTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTC
138024 GTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTCATTCATTTCGTGATTAGGCACTA
451 GTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTCATTCATTTCGTGATTAGGCACTA
* * * * *
138089 CAAACACGTTCTCCTCATTAGGATAAGTGGTATTGATGGTTTTCTTTTGCATGGAAATCTTCTCT
516 TAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCT
*
138154 TTTCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCATAAAA
581 TTACCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCATAAAA
* *
138219 GTTTACATTCTTTCCAAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTCA
646 GTCTCCATTCTTTCCAAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTCA
* * * * *
138284 TGCTTTTGCT-TTGCAGGAGAAGCTTTTC-TTCCCACTGTTAATGATAAAATCAAAATTTGTCCC
711 T-ATTTTGCTGTCGCAAGAGAAGCTTTTCTTTCCAAC-GTTAATGATAAAATC-AAATTTATCCC
* * * * * *
138347 TTAAATAAGAG-AAACATGAATA-TCATACTAATTCCCTTTTTTTTCAGGATTAGGCACCCTAAA
773 TTAAATAAG-GCAAACATGAATACTCATACTAATCCCCATTCTCTTCAGGATTAGCCACCATAAA
* *
138410 CATAGTCTTCTCTTACGGATACAAGATATTGACGATTTAGTTTCACAAGAAACATTTTTTTCCCA
837 CATAGTCTTCTCATACGGATACAAGATATTGACGATTTAGTTTCACAAGAAACACTTTTTTCCCA
138475 CCAATTTTTGAAAATTCTAAGTTCGTGCCTCAAATAAGACAAACA
902 CCAATTTTTGAAAATTCTAAGTTCGTGCCTCAAATAAGACAAACA
* * * * * *
138520 TAGATTCTAGTAAGGATCTTTATTCATTTCGGGATTAGGCACTATAAACACATTCTCCTCATTAG
1 TAGATTCTAGTAAGGATCATCATTCATTTCGTGATTAGGCACTATAAACACATTCTTCTCCTCAG
** * * * * *
138585 GATAAAAGATATTGATGGTTTTC-TTTGCATGGAAATCTTTTCTTTACCTCATTTTTCGTAAAAT
66 GATGCATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTCAATTTCCTTAAAAT
* * * *
138649 CAAAGTTAGTACTTTAAATGAGACAAGCATTGATTCTCGTAATAGTCTCCATTCTTTCCAAGATT
131 CAAACTT-GTACTTTAAATGTGACAAGCATTGATTCTCGTAAAAGTTTCCATTCTTTCCAAGATT
* * * *
138714 GGGAACCAAAAACACATTCTCTTCATTAGGATGCACGACATTGATGCTTTTGCT-TTGTAAGAGA
195 GGGAACCAAAAACACATTCTCTTCATTAGGATACATGACATTGATGCTTTAG-TGTCGTAAGAGA
* * * * * * * *
138778 AGCTTTTCTTTCCACCGTTAATAATAAAATCAAAATTTGTCCCTTAAAAAAGAGAAACATGAATA
259 AGCTTTTCTTTCTAACGTTGATGATAAAATCAAAGTTTGTCTCTTAAATAAG-GAAACTTGAATA
* * * * *
138843 CTCATACTAATTCCCATTT-TTTTTAGGATTAGGCACCCTAAACATAGTCTTTTCTTACAGATAC
323 CTCATACTAA-TCCC-TTTCTTTTCAGGATTAGCCACCATAAACATAGTCTTTTCATACGGATAC
* * * *
138907 AAGATATTGATCATTTAGTTTCGTAAGAAACTTTTTTTTCCCACCAATTTTTGTAAATTCTAAGT
386 AAGATATTGATGATTTGGTTTCCT-AGAAA-TCTTTTTTCCCACCAATTTTTGTAAATTCTAAGT
* * * * *
138972 TCGTGCCTCAAATAAGACAAACATAGATTCTAATAAAGATTTTCATTCATTTTGTGATTAGGCAC
449 TCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTCATTCATTTCGTGATTAGGCAC
*
139037 TATAAACACATTCTCCCCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTT
514 TATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTT
* * *
139102 CTTTACC-TGTTTTCCGTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCATAA
579 CTTTACCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCATAA
* * * * *
139166 AAGTCTCCATTCTTTCTAATATTGGGAACCAAGAACACATTCCCTTTATTAGGATACATG--A--
644 AAGTCTCCATTCTTTCCAAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATT
* *
139227 C--A------T-T-G--ATAGAA---------TCGAA-G-T--T--T---ATC-----TA----T
709 CATATTTTGCTGTCGCAAGAGAAGCTTTTCTTTCCAACGTTAATGATAAAATCAAATTTATCCCT
** * * *
139253 TAAATAAGATAAACATGAATACACATACTAATCCACATTCTTTTCTA-GATTAGGCC-CCATAAA
774 TAAATAAGGCAAACATGAATACTCATACTAATCCCCATTCTCTTC-AGGATTA-GCCACCATAAA
* * * * * * * * * * * * *
139316 CAAATTCCTCTAAAAAGGATACATGATATTGATGCTTTGGTTTCGCAAAAAACACTTTCTTCCCA
837 CATAGTCTTCTCATACGGATACAAGATATTGACGATTTAGTTTCACAAGAAACACTTTTTTCCCA
** * * * * *
139381 CCAATTTTTGTTAATTCAAATTTCGTGCCCCAAATGAGATC-AGCA
902 CCAATTTTTGAAAATTCTAAGTTCGTGCCTCAAATAAGA-CAAACA
* * * * * *
139426 -AGGATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCACTATAAACACAATCTCCTCATTA
1 TA-GATTCTAGTAAGGATCATCATTCATTTCGTGATTAGGCACTATAAACACATTCTTCTCCTCA
** * * * * *
139490 GGATAAACGATATTGATGGTTTTTTTTTTGCGTGGAAATCCTTTT-TTTGCCTTATTTTCCTTAA
65 GGATGCATGATATTGATGG-TTTTCTTTTGCATGGAAAT-CTTTTCTTTGCCTCAATTTCCTTAA
* * * * * * * * *
139554 AATCAAAGTTTATACTTTGAATGAGACATGCGTTGATTCTCGCAAAAGTCTCCATTCTTTTCAAG
128 AATCAAA-CTTGTACTTTAAATGTGACAAGCATTGATTCTCGTAAAAGTTTCCATTCTTTCCAAG
* * *
139619 ATTGGGAACCAAAATCACATTC-CTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAG
192 ATTGGGAACCAAAAACACATTCTC-TTCATTAGGATACATGACATTGATGCTTTAGTGTCGTAAG
* * * * * *
139683 AGAAGCTTTTCTTTCCACCGTTGTTGATAGAATCAAAG-TTGTCTCTTAAGTAAGACAAACGTT-
256 AGAAGCTTTTCTTTCTAACGTTGATGATAAAATCAAAGTTTGTCTCTTAAATAAG-GAAAC-TTG
* * * *
139746 AATACTCATACTAATCCCCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTTTCATAAGGA
319 AATACTCATACTAAT-CCCTTTCTTTTCAGGATTAGCCACCATAAACATAGTCTTTTCATACGGA
* * * * * * * *
139811 TACATGATCTTGATGCTTTGGTTTCGC-AGGATAAGCTTTCTTCTCACCAATTTTTGTAAAGTAT
383 TACAAGATATTGATGATTTGGTTTC-CTA-GA-AATCTTTTTTCCCACCAATTTTTGTAAATTCT
* * * * ***
139875 GAGTTTAC-TG-CTCAAATGAGAAAAACAAGGATTCTTGTTGGGATCTTCATTCATTTCGTGATT
445 AAG-TT-CGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTCATTCATTTCGTGATT
* * * * *
139938 AGGCACTATAAACACATTCTTCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCACGAAAA
508 AGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAA
** *
140003 TCTTTTCTTTGTCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTC
573 TCTTTTCTTTACCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTC
* * * *
140068 TCGTAAAAGTCTCCATTCTTTTCAACATTGGGAACCAAAAACACATTCCCTTCATTAGGATACAT
638 TCATAAAAGTCTCCATTCTTTCCAAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACAT
* * ** * ** * *
140133 TACATTGATGCTTTGGTGTTACAAGA-AAGGCTTTTCTTCCCAACATT-ATCGATAAAATCAAAA
703 GACATTCATATTTTGCTGTCGCAAGAGAA-GCTTTTCTTTCCAACGTTAAT-GATAAAATC-AAA
* * * ** * * *
140196 TTTGTCTCTTAAATAAGACAAAGTTGAATACTCATACTAAT-CCCATTCTTTTTAGGATTAGGCA
765 TTTATCCCTTAAATAAGGCAAACATGAATACTCATACTAATCCCCATTCTCTTCAGGATTAGCCA
* * * * * * * * * **
140260 CCATTAACATAGTCTTCTTATATGGATACAGGATATTCATGAATTGGTTTCCCAAGAAACGTTTT
830 CCATAAACATAGTCTTCTCATACGGATACAAGATATTGACGATTTAGTTTCACAAGAAACACTTT
* * * * * * * *
140325 TTTCCCA-TAATTTTTGTAGATTCTATGTTTGTGCCTTAAATGAGAGAAACA
895 TTTCCCACCAATTTTTGAAAATTCTAAGTTCGTGCCTCAAATAAGACAAACA
* * * * * *
140376 TGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATACTCCTCATTAG
1 TAGATTCTAGTAAGGATCATCATTCATTTCGTGATTAGGCACTATAAACACATTCTTCTCCTCAG
** * ***
140441 GATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGACTTGTTTTCCTTAAAAT
66 GATGCATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTCAATTTCCTTAAAAT
** * * * * * *
140506 CAGAGTTTGTACTTTAAATGAGACATGCATTGATTCCCGTAAAAGTCTCCACTCTTTTCAAGATT
131 CA-AACTTGTACTTTAAATGTGACAAGCATTGATTCTCGTAAAAGTTTCCATTCTTTCCAAGATT
* * * *
140571 GGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGATAA
195 GGGAACCAAAAACACATTCTCTTCATTAGGATACATGACATTGATGCTTTAGTGTCGTAAGAGAA
* ** * * * * *
140636 GCTGTTCTCCCTACCATT-ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATA
260 GCTTTTCTTTCTAACGTTGA-TGATAAAATCAAAGTTTGTCTCTTAAATAAG-GAAACTTGAATA
* * * * * *
140700 GTCATACTAATCCACTTTCTTTTCTGGATTAGGCACCATAAACATTGTCTTCTT-ATAAGGACAC
323 CTCATACTAATCC-CTTTCTTTTCAGGATTAGCCACCATAAACATAGTCTT-TTCATACGGATAC
* * * * * * * * * ** *
140764 ATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTTCTTCCCCCCAATTTTTGAAAAGTAGAAGC
386 AAGATATTGATGATTTGGTTTCCT-AGAAA-TCTTTTTTCCCACCAATTTTTGTAAATTCTAAGT
* * * * * * *
140829 TCATTCTTCAAATGAGACAAAGATAGATTCTAGTAAGGATCTTCATTCATTTCGTGGTTAGGCAC
449 TCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTCATTCATTTCGTGATTAGGCAC
* * * *
140894 TATAAACACATTCTCCCCAATAGGATAAATGATATTGATGGTTTTCTTCTGCCTGGAAATCTTTT
514 TATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTT
* * * *
140959 CTTTGCCTTATTTTCCTTAAAATCAAAGCTTGTACTGTAAATGAGACAAGCATTGATTCTCGTAA
579 CTTTACCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCATAA
* * * *
141024 AAGTCTCTATTCTTTCCATGATTAGGAACCAAAAACGCAATT-CCTTCATTAGAATACATGACAT
644 AAGTCTCCATTCTTTCCAAGATTAGGAACCAAAAACAC-ATTCCCTTCATTAGGATACATGACAT
* ** * * * * ** * *
141088 TGATGCTTTGGTGTCGCAATAGAAGCTTTTCTTTCTAACATTGTTGATAAAATCAAAGTTTGTCT
708 TCATATTTTGCTGTCGCAAGAGAAGCTTTTCTTTCCAACGTTAATGATAAAATCAAA-TTTATCC
* * * * * * * * * * * * *
141153 CTTATACAAGACAAACTTGAGTAGTCATAGTAAT--CCATTTTTTTTCTGGACTAGGCGCCATAA
772 CTTAAATAAGGCAAACATGAATACTCATACTAATCCCCA-TTCTCTTCAGGATTAGCCACCATAA
* * * ** * * * *** ** *
141216 ACATAGTCTTCCCATAAGGATACATGATATCAATGCTTTGGTTTTGTAAGAAATGCTTTCTTCCC
836 ACATAGTCTTCTCATACGGATACAAGATATTGACGATTTAGTTTCACAAGAAACACTTTTTTCCC
* * * *
141281 ACCAATTTTTGAAAA-GCATAAGTTCATTCCTCAAATTAGACAAACA
901 ACCAATTTTTGAAAATTC-TAAGTTCGTGCCTCAAATAAGACAAACA
** * * *
141327 -AGGATTCTAGTAAGGATTTTCAGTCATTTCGTGGTTAGGCACTATAAACACATTC-TCCCCAAT
1 TA-GATTCTAGTAAGGATCATCATTCATTTCGTGATTAGGCACTATAAACACATTCTTCTCC--T
* * ** * *
141390 -AGGAT-CAATGATATTGATGGTTTTCTTTTGCCTGGAAATTTTTTCTTTGTGTTATTTTCCTTA
63 CAGGATGC-ATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTCAATTTCCTTA
* ** * * * *
141453 AAATCAAAGTTTGTACTTTAAATAAGACATGTATTGATTCTCGTAAAAGTCTCCATTCTTTTCAA
127 AAATCAAA-CTTGTACTTTAAATGTGACAAGCATTGATTCTCGTAAAAGTTTCCATTCTTTCCAA
* * * * * * *
141518 CATTGGGAGCCAAAAACACATTCCCTTCGTTAGGATACACGACATTGATGCTTTGGTGTCGCAAG
191 GATTGGGAACCAAAAACACATTCTCTTCATTAGGATACATGACATTGATGCTTTAGTGTCGTAAG
* ** * * * * *
141583 AGAAGCTGTTCTCCCCACCGTT-ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATG
256 AGAAGCTTTTCTTTCTAACGTTGA-TGATAAAATCAAAGTTTGTCTCTTAAATAAG-GAAACTTG
* * * ** * *
141647 AAGAATCATACTAATCCATTTTCTTTTTTGGATTAGGCACCATAAACATAGTCTTTTCATAAGGA
319 AATACTCATACTAATCC-CTTTCTTTTCAGGATTAGCCACCATAAACATAGTCTTTTCATACGGA
* * * * * * * *
141712 TACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTTTTTCCCACTAATTTTTG-AAACGTAT
383 TACAAGATATTGATGATTTGGTTTCCT-AGAAA-TCTTTTTTCCCACCAATTTTTGTAAA-TTCT
* * *
141776 AAGTTCATTACC-CAAATAAGACAAACATGGATTCTAG-AAAGGATCTTCATTCATTTCGTTG-T
445 AAGTTC-GTGCCTCAAATGAGACAAACATGGATTCTAGTAAA-GATCTTCATTCATTTCG-TGAT
* * * *
141838 TAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATTGATGGTTTTCTTTTGCCTGAAA
507 TAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAA
* * * *
141903 ATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGATTGCACTTTAAATGAGACAAGCATAGATT
572 ATCTTTTCTTTACCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATT
* * * * *
141968 CTCGTAAAAGTCTCCACTCTTTCCAAGATTGGGAACCAACAACACATTCCCTTCATTAGAATACA
637 CTCATAAAAGTCTCCATTCTTTCCAAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACA
* ** * * * **
142033 TGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTTCTAACGTTGTTGATAAAATCAAAGT
702 TGACATTCATATTTTGCTGTCGCAAGAGAAGCTTTTCTTTCCAACGTTAATGATAAAATCAAA-T
* * * * * * * * * *
142098 TTGTCTCTTAAATAAGACAAACATGAATAGTCATAATAATCCACTTTCTTTTCTGGATT-GGCAC
766 TTATCCCTTAAATAAGGCAAACATGAATACTCATACTAATCCCCATTCTCTTCAGGATTAGCCAC
* * * * * * * * ** *
142162 CATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTCCACAAGATATGCTTTC
831 CATAAACATAGTCTTCTCATACGGATACAAGATATTGACGATTTAGTTTCACAAGAAACACTTTT
* * * * * * *
142227 TTCTCACCAATTTTTGTAAAGTATGAGTTCATTG-CTCAAATGAGACAAACA
896 TTCCCACCAATTTTTGAAAATTCTAAGTTC-GTGCCTCAAATAAGACAAACA
* * * * * * * * * * * *
142278 TGGATTCTTGTAGGGATCTTCATTAATTTCCTAATTAAGCACTATAAACACATTCTCCTCATTAC
1 TAGATTCTAGTAAGGATCATCATTCATTTCGTGATTAGGCACTATAAACACATTCTTCTCCTCAG
** * * * * * * *
142343 GATAAAAGATATTTATGATTTTCTTTTGCATTGAAATCTTTTCTTTGTCTTATTTTCCTTAAAAT
66 GATGCATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTCAATTTCCTTAAAAT
* ** * * *
142408 CAAAGTTTGTACTTTAAATAAGACATGCATTGATTCTCGTAAAAGTATCCATTCTTTTCAAGATT
131 CAAA-CTTGTACTTTAAATGTGACAAGCATTGATTCTCGTAAAAGTTTCCATTCTTTCCAAGATT
* * * * * *
142473 GGGAACCAAAAACACTTTCCCTTCGTTAGGATACTTGACATTGATGCTTTGGTGTCGCAAGAGAA
195 GGGAACCAAAAACACATTCTCTTCATTAGGATACATGACATTGATGCTTTAGTGTCGTAAGAGAA
** ** * * ** * * * **
142538 GCTTTGGTTTCGTAAGAAACGCTTTCTTCCCACCAATTTTTGTAACGTATAAGTTCATGCCCCAA
260 GCTTTTCTTTC-T----AACG--TTGAT--GA-TAA--AAT-CAAAGT-T-TG-TC-T--CTTAA
* * * * ** * *
142603 ATAAGGATACAAGATCTTGATTAGGCACCGCAAACATAGT--C-TTCTCATAAGGATTAGGCACC
306 ATAAGG----AA-A-CTTGA--A--TA-CTCATAC-TAATCCCTTTCTTTTCAGGATTAGCCACC
** * * * * * * * * *
142665 GCAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTCCACAAGATATGCTTTCT
359 ATAAACATAGTCTTTTCATACGGATACAAGATATTGATGATTTGGTTTC-CTAGAAAT-CTTTTT
* * * * * * **
142730 TCTCACCAATTTTTGTAAAGTATGAGTTCATTG-CTCAAATGAGACAAACATGGATTCTTGTAGG
422 TCCCACCAATTTTTGTAAATTCTAAGTTC-GTGCCTCAAATGAGACAAACATGGATTCTAGTAAA
* * * * * * *
142794 GATCTTCGTTAATTTCCTAATTAGGCACTATAAACACATTCTCCTCATTACGATAAAAGATATTT
486 GATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTG
* * **
142859 ATGATTTTCTTTTGCATTGAAATCTTTTCTTTGTCTTATTTTCCTTAAAATCAAAGTTTGTACTT
551 ATGGTTTTCTTTTGCATGGAAATCTTTTCTTTACCTTATTTTCCTTAAAATCAAAGTTTGTACTT
* * * * * *
142924 TAAATAAGACATGCATTGATTCTCGTAAAAGTATCCATTCTTTTCAAGATTGGGAACCAAAAACA
616 TAAATGAGACAAGCATTGATTCTCATAAAAGTCTCCATTCTTTCCAAGATTAGGAACCAAAAACA
* ** * * * *
142989 CATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGATAAGCTGTTC-TCCCTA
681 CATTCCCTTCATTAGGATACATGACATTCATATTTTGCTGTCGCAAGAGAAGCTTTTCTTTCC-A
* * * * * * * * *
143053 CCATTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCA
745 ACGTTAATGATAAAATCAAA-TTTATCCCTTAAATAAGGCAAACATGAATACTCATACTAATCCC
* * * * * * * * * * * *
143118 CTTTCTTTTCTGGATTAGGCACCATAAACATTGTCTTCTTATAAGGACACATGATATCGATGCTT
809 CATTCTCTTCAGGATTAGCCACCATAAACATAGTCTTCTCATACGGATACAAGATATTGACGATT
* ** * * * * ** * * * * *
143183 TGGTTTCGTAAGAAACGCTTTCTTCCCCCCAATTTTTGAAAAGTAGAAGCTCATTCTTCAAATGA
874 TAGTTTCACAAGAAACACTTTTTTCCCACCAATTTTTGAAAATTCTAAGTTCGTGCCTCAAATAA
*
143248 GACAAAGA
939 GACAAACA
* * *
143256 TAGATTCTAGTAAGGATCTTCATTCATTTCGTGGTTAGGCACTATAAACACATTC-TCCCCAAT-
1 TAGATTCTAGTAAGGATCATCATTCATTTCGTGATTAGGCACTATAAACACATTCTTCTCC--TC
** * * * *
143319 AGGATAAATGATATTGATGGTTTTCTTCTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAA
64 AGGATGCATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTCAATTTCCTTAAA
* * * * *
143384 ATCAAAGCTTGTACTATAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCTATTCTTTCCATGA
129 ATCAAA-CTTGTACTTTAAATGTGACAAGCATTGATTCTCGTAAAAGTTTCCATTCTTTCCAAGA
* * * * * *
143449 TTAGGAACCAAAAACGCAATTC-CTTCATTAGAATACATGACATTGATGCTTTGGTGTCGCAATA
193 TTGGGAACCAAAAACAC-ATTCTCTTCATTAGGATACATGACATTGATGCTTTAGTGTCGTAAGA
* * * * * *
143513 GAAGCTTTTCTTTCTAACATTGTTGATAAAATCAAAGTTTGTCTCTTATACAAGACAAACTTGAG
257 GAAGCTTTTCTTTCTAACGTTGATGATAAAATCAAAGTTTGTCTCTTAAATAAG-GAAACTTGAA
* * * * * * * * ** *
143578 TAGTCATAGTAATCCATTTTTTTTCTGGACTAGGCGCCATAAACATAGTCTTCCCATAAGGATAC
321 TACTCATACTAATCCCTTTCTTTTCAGGATTAGCCACCATAAACATAGTCTTTTCATACGGATAC
* ** * ** * **
143643 ATGATATCAATGCTTTGGTTTTGTAAGAAATGCTTTCTTCCCACCAATTTTTG-AAAAGCATAAG
386 AAGATATTGATGATTTGGTTTCCT-AGAAAT-CTTTTTTCCCACCAATTTTTGTAAATTC-TAAG
* * * * * * * *
143707 TTCATTCCTCAAATTAGACAAACAAGGATTCTAGTAAGGATTTTCAGTCATTTCGTGGTTAGGCA
448 TTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTCATTCATTTCGTGATTAGGCA
* * * * *
143772 CTATAAACACATTCTCCCCAATAGGATCAATGATATTGATGGTTTTCTTTTGCCTGGAAATTTTT
513 CTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTT
*** * * * * *
143837 TCTTTGTGTTATTTTCCTTAAAATCAAAGGTTGTACTTTAAATAAGACATGTATTGATTCTCGTA
578 TCTTTACCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCATA
* * * * * *
143902 AAAGTCTCCATTCTTTTCAACATTGGGAGCCAAAAACACATTCCCTTCGTTAGGATACACGACAT
643 AAAGTCTCCATTCTTTCCAAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACAT
* ** * * ** * * * * *
143967 TGATGCTTTGGTGTCGCAAGAGAAGCTGTTCTCCCCACCGTTATTGATAGAATCAAAGTTTGTCT
708 TCATATTTTGCTGTCGCAAGAGAAGCTTTTCTTTCCAACGTTAATGATAAAATCAAA-TTTATCC
* * * *** * ** *
144032 CTTAAATAAGACAAACATGAAGAGTCATACTAATCCATTTTCTTTTTTGGATTAGGCACCATAAA
772 CTTAAATAAGGCAAACATGAATACTCATACTAATCCCCATTCTCTTCAGGATTAGCCACCATAAA
* * * * * * * ** *
144097 CATAGTCTTTTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTTTTTCCCA
837 CATAGTCTTCTCATACGGATACAAGATATTGACGATTTAGTTTCACAAGAAACACTTTTTTCCCA
* ** * * *
144162 CTAATTTTTGAAACGTATAAGTTCATTACC-CAAATAAGACAAACA
902 CCAATTTTTGAAAATTCTAAGTTC-GTGCCTCAAATAAGACAAACA
* * * *
144207 TGGATTCTAGAAAGGATCTTCATTCATTTCGTTG-TTAGGCACTATAAACACATTC-TCCCCAAT
1 TAGATTCTAGTAAGGATCATCATTCATTTCG-TGATTAGGCACTATAAACACATTCTTCTCC--T
** * * * *
144270 -AGGATAAATGATATTGATGGTTTTCTTTTGCCTGAAAATCTTTTCTTTGCCTTATTTTCCTTAA
63 CAGGATGCATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTCAATTTCCTTAA
* * * * * *
144334 AATCAAAGATTGCACTTTAAATGAGACAAGCATAGATTCTCGTAAAAGTCTCCACTCTTTCCAAG
128 AATCAAA-CTTGTACTTTAAATGTGACAAGCATTGATTCTCGTAAAAGTTTCCATTCTTTCCAAG
* * * * **
144399 ATTGGGAACCAACAACACATTCCCTTCATTAGAATACATGACATTGATGCTTTGGTGTCACAAGA
192 ATTGGGAACCAAAAACACATTCTCTTCATTAGGATACATGACATTGATGCTTTAGTGTCGTAAGA
* * *
144464 GAAGCTTTTCTTTCTAACGTTGTTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAA
257 GAAGCTTTTCTTTCTAACGTTGATGATAAAATCAAAGTTTGTCTCTTAAATAAG-GAAACTTGAA
* * * * * *
144529 TAGTCATAATAATCCACTTTCTTTTCTGGATT-GGCACCATAAACATAGTCTTCTCATAAGGATA
321 TACTCATACTAATCC-CTTTCTTTTCAGGATTAGCCACCATAAACATAGTCTTTTCATACGGATA
* * * * * * * * * * *
144593 CATGATCTTGATGCTTTGGTTCCACAAGATATGCTTTCTTCTCACCAATTTTTGTAAAGTATGAG
385 CAAGATATTGATGATTTGGTTTC-CTAGAAAT-CTTTTTTCCCACCAATTTTTGTAAATTCTAAG
* * ** * * * *
144658 TTCATTG-CTCAAATGAGACAAACATGGATTCTTGTAGGGATCTTCATTAATTTCCTAATTAAGC
448 TTC-GTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTCATTCATTTCGTGATTAGGC
* * * * *
144722 ACTATAAACACATTCTCCTCATTACGATAAAAGATATTTATGATTTTCTTTTGCATTGAAATCTT
512 ACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTT
** * * *
144787 TTCTTTGTCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATAAGACATGCATTGATTCTCGT
577 TTCTTTACCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCAT
* * * * * *
144852 AAAAGTATCCATTCTTTTCAAGATTGGGAACCAAAAACACTTTCCCTTCGTTAGGATACTTGACA
642 AAAAGTCTCCATTCTTTCCAAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACA
* ** * ** *
144917 TTGATGCTTTGGTGTCGCAAGAGAAGCTTTGGTTTCGTAAGAAACGCTTTCTTCCCACCAATTTT
707 TTCATATTTTGCTGTCGCAAGAGAAGCTTTTCTTTC-----CAACG-----TT------AA----
* * * * * * ** ** *
144982 TG-TAACGTAT-AAGTTCATGCCC-CAAATAAGGATACAAGATCTTGATTAGGCACCGCAAACAT
752 TGATAA--AATCAAATTTAT-CCCTTAAATAAGG---CAA-A-CATGAATACTCA-TAC-TA-AT
*** * * * ** * * * *
145044 AGTC-TTCTCATAAGGATTAGGCACCGCAAACATAGTCTTCTCATAAGGATACATGATCTTGATG
806 CCCCATTCTCTTCAGGATTAGCCACCATAAACATAGTCTTCTCATACGGATACAAGATATTGACG
* * * * ** * * * * * * *
145108 CTTTGGTTCCACAAGATATGCTTTCTTCTCACCAATTTTTGTAAAGTATGAGTTCATTG-CTCAA
871 ATTTAGTTTCACAAGAAACACTTTTTTCCCACCAATTTTTGAAAATTCTAAGTTC-GTGCCTCAA
*
145172 ATGAGACAAACA
935 ATAAGACAAACA
* * * * * * * * * * *
145184 TGGATTCTTGTAGGGATCTTCATTAATTTCCTAATTAGGCACTATAAACACATTCTCCTCATTAC
1 TAGATTCTAGTAAGGATCATCATTCATTTCGTGATTAGGCACTATAAACACATTCTTCTCCTCAG
** * * * * * * * * *
145249 GATAAAAGATATTTATGATTTTCTATTGTATTGAAATCTTTTCTTTGTCTTATTTTCCTTAAAAT
66 GATGCATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTCAATTTCCTTAAAAT
* ** * * *
145314 CAAAGTTTGTACTTTAAATAAGACATGCATTGATTCTCGTAAAAGTATCCATTCTTTTCAAGATT
131 CAAA-CTTGTACTTTAAATGTGACAAGCATTGATTCTCGTAAAAGTTTCCATTCTTTCCAAGATT
* * * *
145379 GGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGATAA
195 GGGAACCAAAAACACATTCTCTTCATTAGGATACATGACATTGATGCTTTAGTGTCGTAAGAGAA
* ** * * * * *
145444 GCTGTTCTCCCTACCATT-ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATA
260 GCTTTTCTTTCTAACGTTGA-TGATAAAATCAAAGTTTGTCTCTTAAATAAG-GAAACTTGAATA
* * * * * *
145508 GTCATACTAATCCACTTTCTTTTCTGGATTAGGCACCATAAACATTGTCTTCTT-ATAAGGACAC
323 CTCATACTAATCC-CTTTCTTTTCAGGATTAGCCACCATAAACATAGTCTT-TTCATACGGATAC
* * * * * * * * * ** *
145572 ATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTTCTTCCCCCCAATTTTTGAAAAGTAGAAGC
386 AAGATATTGATGATTTGGTTTCCT-AGAAA-TCTTTTTTCCCACCAATTTTTGTAAATTCTAAGT
* * * * * * *
145637 TCATTCTTCAAATGAGACAAAGATAGATTCTAGTAAGGATCTTCATTCATTTCGTGGTTAGGCAC
449 TCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTCATTCATTTCGTGATTAGGCAC
* * * *
145702 TATAAACACATTCTCCCCAATAGGATAAATGATATTGATGGTTTTCTTCTGCCTGGAAATCTTTT
514 TATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTT
* * * *
145767 CTTTGCCTTATTTTCCTTAAAATCAAAGCTTGTACTATAAATGAGACAAGCATTGATTCTCGTAA
579 CTTTACCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCATAA
* * * *
145832 AAGTCTCTATTCTTTCCATGATTAGGAACCAAAAACGCAATT-CCTTCATTAGAATACATGACAT
644 AAGTCTCCATTCTTTCCAAGATTAGGAACCAAAAACAC-ATTCCCTTCATTAGGATACATGACAT
* ** * * * * ** * *
145896 TGATGCTTTGGTGTCGCAATAGAAGCTTTTCTTTCTAACATTGTTGATAAAATCAAAGTTTGTCT
708 TCATATTTTGCTGTCGCAAGAGAAGCTTTTCTTTCCAACGTTAATGATAAAATCAAA-TTTATCC
* * * * * * * *** * * * * * *
145961 CTTATACAAGACAAACTTGAGTAGTCATAGTAATCCATTTTTTTTTCTGGACTAGGCGCCATAAA
772 CTTAAATAAGGCAAACATGAATACTCATACTAATCCCCATTCTCTTCAGGATTAGCCACCATAAA
* * * ** * * * *** ** *
146026 CATAGTCTTCCCATAAGGATACATGATATCAATGCTTTGGTTTTGTAAGAAATGCTTTCTTCCCA
837 CATAGTCTTCTCATACGGATACAAGATATTGACGATTTAGTTTCACAAGAAACACTTTTTTCCCA
* * * *
146091 CCAATTTTTGAAAA-GCATAAGTTCATTCCTCAAATTAGACAAACA
902 CCAATTTTTGAAAATTC-TAAGTTCGTGCCTCAAATAAGACAAACA
** * * *
146136 -AGGATTCTAGTAAGGATTTTCAGTCATTTCGTGGTTAGGCACTATAAACACATTC-TCCCCAAT
1 TA-GATTCTAGTAAGGATCATCATTCATTTCGTGATTAGGCACTATAAACACATTCTTCTCC--T
* * ** * *
146199 -AGGAT-CAATGATATTGATGGTTTTCTTTTGCCTGGAAATTTTTTCTTTGTGTTATTTTCCTTA
63 CAGGATGC-ATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTCAATTTCCTTA
* ** * * * *
146262 AAATCAAAGTTTGTACTTTAAATAAGACATGTATTGATTCTCGTAAAAGTCTCCATTCTTTTCAA
127 AAATCAAA-CTTGTACTTTAAATGTGACAAGCATTGATTCTCGTAAAAGTTTCCATTCTTTCCAA
* * * * * *
146327 CATTGGGAGCCAAAAACACATTCCCTTCGTTAGGATACATGACATTGATGCTTTGGTGTCGCAAG
191 GATTGGGAACCAAAAACACATTCTCTTCATTAGGATACATGACATTGATGCTTTAGTGTCGTAAG
* ** * * * * *
146392 AGAAGCTGTTCTCCCCACCGTT-ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATG
256 AGAAGCTTTTCTTTCTAACGTTGA-TGATAAAATCAAAGTTTGTCTCTTAAATAAG-GAAACTTG
* * * ** * *
146456 AAGAGTCATACTAATCCATTTTCTTTTTTGGATTAGGCACCATAAACATAGTCTTTTCATAAGGA
319 AATACTCATACTAATCC-CTTTCTTTTCAGGATTAGCCACCATAAACATAGTCTTTTCATACGGA
* * * * * * * *
146521 TACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTTTTTCCCACTAATTTTTG-AAACGTAT
383 TACAAGATATTGATGATTTGGTTTCCT-AGAAA-TCTTTTTTCCCACCAATTTTTGTAAA-TTCT
* * *
146585 AAGTTCATTACC-CAAATAAGACAAACATGGATTCTAG-AAAGGATCTTCATTCATTTCGTTG-T
445 AAGTTC-GTGCCTCAAATGAGACAAACATGGATTCTAGTAAA-GATCTTCATTCATTTCG-TGAT
* * * *
146647 TAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATTGATGGTTTTCTTTTGCCTGAAA
507 TAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAA
* * * * *
146712 ATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGATAGCACTTTAAATGAGACAAGCATAGATT
572 ATCTTTTCTTTACCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATT
* * * * *
146777 CTCGTAAAAGTCTCCACTCTTTCCAAGATTGGGAACCAACAACACATTCCCTTCATTAGAATACA
637 CTCATAAAAGTCTCCATTCTTTCCAAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACA
* ** * * * * **
146842 TGACATTGATGCTTTGGTGTCACAAAAGAAGCTTTTCTTTCTAACGTTGTTGATAAAATCAAAGT
702 TGACATTCATATTTTGCTGTCGCAAGAGAAGCTTTTCTTTCCAACGTTAATGATAAAATCAAA-T
* * * * * * * * *
146907 TTGTCTCTTAAATAAGACAAACATGAATAGTCATAATAATCCACTTTCTTTTCTA-GATT-GGCA
766 TTATCCCTTAAATAAGGCAAACATGAATACTCATACTAATCCCCATTCTCTTC-AGGATTAGCCA
* * * * * * * * * * **
146970 GCATAAACATAGTCTTCTCATAAGGATACATGATCTTAATGCTTTGGTTCCACAAGATATGCTTT
830 CCATAAACATAGTCTTCTCATACGGATACAAGATATTGACGATTTAGTTTCACAAGAAACACTTT
* * * * * *
147035 CTTCTCACCAATTTTTGTAAAGTATGAA-TTCGTTG-CTCAAATGAGACAAACA
895 TTTCCCACCAATTTTTGAAAATTCT-AAGTTCG-TGCCTCAAATAAGACAAACA
* * * * * *
147087 TGGATTCTTGTAGGGATCTTCATTAATTTCGTTG-TTAGGCACTATAAACACATTC-TCCCCAAT
1 TAGATTCTAGTAAGGATCATCATTCATTTCG-TGATTAGGCACTATAAACACATTCTTCTCC--T
** * * * *
147150 -AGGATAAATGATATTGATGGTTTTCTTTTGCCTGAAAATCTTTTCTTTGCCTTATTTTCCTTAA
63 CAGGATGCATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTCAATTTCCTTAA
* * * * * *
147214 AATCAAAGATTGCACTTTAAATGAGACAAGCATAGATTCTCGTAAAAGTCTCCACTCTTTCCAAG
128 AATCAAA-CTTGTACTTTAAATGTGACAAGCATTGATTCTCGTAAAAGTTTCCATTCTTTCCAAG
* * * * **
147279 ATTGGGAACCAACAACACATTCCCTTCATTAGAATACATGACATTGATGCTTTGGTGTCACAAGA
192 ATTGGGAACCAAAAACACATTCTCTTCATTAGGATACATGACATTGATGCTTTAGTGTCGTAAGA
* *
147344 GAAGCTTTTCCTTCTAACGTTGTTGATAAAATCAAAGTTTGTCTCTTAAATAAGGCAAACTTGAA
257 GAAGCTTTTCTTTCTAACGTTGATGATAAAATCAAAGTTTGTCTCTTAAATAAGG-AAACTTGAA
* * * *
147409 TACTCATACTAATCCCCATTCTTTTCAGGATTAACCACCATAAACATAGTCTTTTTATAAGGATA
321 TACTCATACTAAT-CCCTTTCTTTTCAGGATTAGCCACCATAAACATAGTCTTTTCATACGGATA
* * * * * * *
147474 CATGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTTCCCACCAATTTTAGTAAATTCTAAG
385 CAAGATATTGATGATTTGG-TTTCCTAGAAA-TCTTTTTTCCCACCAATTTTTGTAAATTCTAAG
** ** * * *
147539 TTCGCCCCTCAAATGAGACAAACATGGATTCTAGTAGGGGTCATCATTCATTTTGTGATTAGGCA
448 TTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTCATTCATTTCGTGATTAGGCA
* * * * *
147604 CTATAAACACATTCTCCTCCTTAGGATAAACGATATTGATGGTTTTCTTTTTCATGAAAATATTT
513 CTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTT
* * * * * *
147669 TCTTTGCATTA-TTTCCATAAAATCAAAGTTTGTACTTTAAATGAAACAAGCATTGATTCGCGTA
578 TCTTTACCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCATA
*
147733 AAAGTCTCCATTTTTTCCAAGATT-GGAAACCAAAAACACATTCCCTTCATTAGGATACATGACA
643 AAAGTCTCCATTCTTTCCAAGATTAGG-AACCAAAAACACATTCCCTTCATTAGGATACATGACA
* ** * * ** * *
147797 TTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCTTAA-GTTGTTGATAAAATCAAGTTTCTC
707 TTCATATTTTGCTGTCGCAAGAGAAGCTTTTCTTTC-CAACGTTAATGATAAAATCAAATTTATC
* * * * *
147861 TCTTAAATAAGGCAAACTTGAGTACTCATACTAATCCCCATTCTTTTCAAGATTAGCCACCATAA
771 CCTTAAATAAGGCAAACATGAATACTCATACTAATCCCCATTCTCTTCAGGATTAGCCACCATAA
* * * * * * *
147926 ACATAGTCTTCTGATACGGATACAAGA-ATTTTATGATTTGGTTTCACTAGGAACGCTTTTTTCC
836 ACATAGTCTTCTCATACGGATACAAGATA-TTGACGATTTAGTTTCACAAGAAACACTTTTTTCC
* * * * *
147990 CA-CAATTTTTGTAGATTCTATGTTCGTGCCTCAAATGAGATAAACA
900 CACCAATTTTTGAAAATTCTAAGTTCGTGCCTCAAATAAGACAAACA
* * *
148036 TGGATTCTAGTAAGAATCATCATTCATTTCGTGATTAGGCACCATAAACACATTCTTCTCCTCAG
1 TAGATTCTAGTAAGGATCATCATTCATTTCGTGATTAGGCACTATAAACACATTCTTCTCCTCAG
* * *
148101 GATGCATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTTTTTGCTTCACTTTCCTTAAAAT
66 GATGCATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTCAATTTCCTTAAAAT
* * * * * * *
148166 CAAAGTTTGTACTTTAAATGAGAGATGCATTGATTCTCGTAAAAGTCTCCATTCTTTCTAACATT
131 CAAA-CTTGTACTTTAAATGTGACAAGCATTGATTCTCGTAAAAGTTTCCATTCTTTCCAAGATT
** * * *
148231 GGGAAAAAAAAAGACATTCCCTTTATTAGGATAC---A-A--GA--C---A---T--T-------
195 GGGAACCAAAAACACATTCTCTTCATTAGGATACATGACATTGATGCTTTAGTGTCGTAAGAGAA
* * *
148273 G------------A---T-A-G----AATCAAAGTTTATCTCTTAAATAAGACAAACATGAATAC
260 GCTTTTCTTTCTAACGTTGATGATAAAATCAAAGTTTGTCTCTTAAATAAG-GAAACTTGAATAC
* * * * * * * * * * *
148317 TCATACTAATCCACATTCTTTTCTGGATTAGGCACCGTAAACAAATTCTTCTAATAAGGATATAT
324 TCATACTAATCC-CTTTCTTTTCAGGATTAGCCACCATAAACATAGTCTTTTCATACGGATACAA
* * * ** * * *
148382 GATATTGATGCTTTGGTTTCGCAAGAAACACTTTCATCCCACCAATTTTTTGTTAATTCAAATTT
388 GATATTGATGATTTGGTTTC-CTAGAAA-TCTTTTTTCCCACCAA-TTTTTGTAAATTCTAAGTT
* * * * *
148447 CGTGCCCCAAATGAGATAAGCAAGGATTCTAGT-AAGCATCTTCATTCATTTCATGATTAGGCAC
450 CGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAG-ATCTTCATTCATTTCGTGATTAGGCAC
* * * *
148511 TATAAACACATTCTCCTCATTCA-GATAAACGATATTAATGGTTTT-TTTTGCGTGGAATTCTTT
514 TATAAACACATTCTCCTCATT-AGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTT
* * * * * *
148574 TCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAAAGAGACATGCGTTGATTTTCACA
578 TCTTTACCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCATA
* * * * * *
148639 AAAGTCTCCATTCTTTTCAAGATTGGGAACTAAAACCACATTCCTTTCAATAGGATACATGACAT
643 AAAGTCTCCATTCTTTCCAAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACAT
* ** * * ** * * * **
148704 TGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTGTTGATAGAATCAAAGTTGTCTG
708 TCATATTTTGCTGTCGCAAGAGAAGCTTTTCTTTCCAACGTTAATGATAAAATCAAATTTATCCC
* * *
148769 TTAAATAAGACAAACGTGAATACTCATACTAATCCCCATTC-CTTTCAGGATTAGGCACCATAAA
773 TTAAATAAGGCAAACATGAATACTCATACTAATCCCCATTCTC-TTCAGGATTAGCCACCATAAA
* * * * * * * * * * * *
148833 CATAGTCTTTTCATAAGGATACATGATCTTGATGCTTTGGTTTCACAGGATACGCTTTCTTCTCA
837 CATAGTCTTCTCATACGGATACAAGATATTGACGATTTAGTTTCACAAGAAACACTTTTTTCCCA
* * * * * *
148898 CCAATTTTTGTAAAGTATGAGTTTAC-T-ACTCAAATGAGACAAACA
902 CCAATTTTTGAAAATTCTAAG-TT-CGTGCCTCAAATAAGACAAACA
* * * * * *
148943 TGGATTCTTGTAGGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATT-TTCTTCTTTA
1 TAGATTCTAGTAAGGATCATCATTCATTTCGTGATTAGGCACTATAAACACATTCTTC-TCCTCA
** * *
149007 GGATAAATGATATTTATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTG--TCATATTTTCCTTAA
65 GGATGCATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTCA-A-TTTCCTTAA
* * * * * * *
149070 AATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTTTTTTCAAC
128 AATCAAA-CTTGTACTTTAAATGTGACAAGCATTGATTCTCGTAAAAGTTTCCATTCTTTCCAAG
* * * * * * *
149135 ATTGGGAACCAAAAACGCATTCCCTTCATTGGGATACGTTACATTGATGAC-TTGGTGTCGCAAG
192 ATTGGGAACCAAAAACACATTCTCTTCATTAGGATACATGACATTGATG-CTTTAGTGTCGTAAG
* * * * * * *
149199 AGATGCTTTTCTTCCCAACGTT-ATCGATAAAATCAAAATTTGCCTCTTAAAAAAGACAAAGC-T
256 AGAAGCTTTTCTTTCTAACGTTGAT-GATAAAATCAAAGTTTGTCTCTTAAATAAG-GAAA-CTT
* * * * * **
149262 GAAAACTCATACTAATCCCATTCTTTTTAGGATTAGGCACCATTAACATAGTCTTCTT-ATATAG
318 GAATACTCATACTAATCCCTTTCTTTTCAGGATTAGCCACCATAAACATAGTCTT-TTCATACGG
** * * * * * *
149326 ATACGGGATATTGATGAATTGGTTTCACAAGAAAAGCTTGTTTCTCA-TAATTTTTGTAAATTCT
382 ATACAAGATATTGATGATTTGGTTTC-CTAG-AAATCTTTTTTCCCACCAATTTTTGTAAATTCT
* * * * *
149390 ATGTTCGTGCCTCAAATGAGACAAACACGAATTCTAGTAAGGATCTTCATTCACTTCGTGATTAG
445 AAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTCATTCATTTCGTGATTAG
* * *
149455 GCATTATAAACACATACTCCTCATTAGGATAAATGATATTGATGGTTTTTTTTTTTTGCATGGAA
510 GCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGG---TTTTCTTTTGCATGGAA
* * * *
149520 ATCTTTTCTTTGA-CTTGTTTCCCTTAAAATCAAAGTTTGCACTTTAAATGAGACATGCATTGAT
572 ATCTTTTCTTT-ACCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGAT
* * * *
149584 TCCCGTAAAAGACTCCATTCCTTT-CAAGATTGGGAACCAAAA
636 TCTCATAAAAGTCTCCATT-CTTTCCAAGATTAGGAACCAAAA
149626 GATGTTCTCC
Statistics
Matches: 10235, Mismatches: 1477, Indels: 683
0.83 0.12 0.06
Matches are distributed among these distances:
904 5 0.00
905 176 0.02
906 568 0.06
907 474 0.05
908 286 0.03
909 11 0.00
910 2 0.00
911 2 0.00
913 2 0.00
914 1 0.00
915 3 0.00
916 1 0.00
918 1 0.00
920 2 0.00
921 2 0.00
922 1 0.00
923 3 0.00
924 2 0.00
925 3 0.00
926 1 0.00
930 1 0.00
933 7 0.00
935 3 0.00
936 3 0.00
939 1 0.00
941 1 0.00
942 4 0.00
943 2 0.00
945 4 0.00
946 1 0.00
947 240 0.02
948 280 0.03
949 1232 0.12
950 1219 0.12
951 2987 0.29
952 1023 0.10
953 10 0.00
954 15 0.00
955 2 0.00
956 11 0.00
957 2 0.00
958 9 0.00
959 17 0.00
960 1 0.00
961 4 0.00
962 2 0.00
963 2 0.00
964 5 0.00
965 5 0.00
966 2 0.00
967 3 0.00
968 5 0.00
969 1 0.00
970 20 0.00
971 10 0.00
972 2 0.00
973 11 0.00
974 2 0.00
975 12 0.00
976 8 0.00
977 844 0.08
978 661 0.06
979 8 0.00
980 4 0.00
981 3 0.00
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.36
Consensus pattern (946 bp):
TAGATTCTAGTAAGGATCATCATTCATTTCGTGATTAGGCACTATAAACACATTCTTCTCCTCAG
GATGCATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTCAATTTCCTTAAAAT
CAAACTTGTACTTTAAATGTGACAAGCATTGATTCTCGTAAAAGTTTCCATTCTTTCCAAGATTG
GGAACCAAAAACACATTCTCTTCATTAGGATACATGACATTGATGCTTTAGTGTCGTAAGAGAAG
CTTTTCTTTCTAACGTTGATGATAAAATCAAAGTTTGTCTCTTAAATAAGGAAACTTGAATACTC
ATACTAATCCCTTTCTTTTCAGGATTAGCCACCATAAACATAGTCTTTTCATACGGATACAAGAT
ATTGATGATTTGGTTTCCTAGAAATCTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTCGTGCC
TCAAATGAGACAAACATGGATTCTAGTAAAGATCTTCATTCATTTCGTGATTAGGCACTATAAAC
ACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTACC
TTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCATAAAAGTCTC
CATTCTTTCCAAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTCATATTT
TGCTGTCGCAAGAGAAGCTTTTCTTTCCAACGTTAATGATAAAATCAAATTTATCCCTTAAATAA
GGCAAACATGAATACTCATACTAATCCCCATTCTCTTCAGGATTAGCCACCATAAACATAGTCTT
CTCATACGGATACAAGATATTGACGATTTAGTTTCACAAGAAACACTTTTTTCCCACCAATTTTT
GAAAATTCTAAGTTCGTGCCTCAAATAAGACAAACA
Found at i:139043 original size:158 final size:156
Alignment explanation
Indices: 137920--139075 Score: 432
Period size: 158 Copynumber: 7.3 Consensus size: 156
137910 TTCTTTCCAA
* * * * * * * *
137920 GATTAGCCACCATAAACATAGTCTTCTGA-TACGGATACAGGATATTGATGATTTGGTTTCCCTA
1 GATTAGGCACCATAAACACAGTCTCCTCATTA-GGATACAAGATATTGATCATTTAGTTT-GC-A
* * * * * * *
137984 GGAATGC-TTT-TTTCCCA-CATTTTTTGTAGATTCTATGTTCGTGCCTCAAATGAGACAAACAT
63 AGAAAGCTTTTCTTTCCCACCA-TTTTTGTAAAATCAAAGTTCGTGCCTCAAATAAGACAAACAT
* *
138046 GGATTCTAGTAAAGATCTT-CATTCATTTCG
127 AGATTCTAATAAAGAT-TTCCATTCATTTCG
* * * * ** **
138076 TGATTAGGCACTACAAACAC-GTTCTCCTCATTAGGATA-AGTGGTATTGATGGTTTTCTTTTGC
1 -GATTAGGCACCATAAACACAG-TCTCCTCATTAGGATACA-AGATATTGAT-CATTTAGTTTGC
* * * * ** * * * * * *
138139 ATGGAAATCTTCTCTTTTCC-TTATTTTCCT-TAAAATCAAAGTTTGTACTTTAAATGAGACAAG
62 A-AGAAAGCTTTTCTTTCCCACCATTTT--TGTAAAATCAAAGTTCGTGCCTCAAATAAGACAAA
* * * *
138202 CATTGATTCTCATAAA-AGTTTACATTC-TTTCCAA
124 CATAGATTCTAATAAAGA-TTTCCATTCATTT-C-G
* * * * * * *
138236 GATTAGGAACCAAAAACACATTC-CCTTCATTAGGATACATGACATTCATGC-TTTTGCTTTGCA
1 GATTAGGCACCATAAACACAGTCTCC-TCATTAGGATACAAGATATTGAT-CATTTAG-TTTGCA
* ** ** * * * * *
138299 GGAGAAGCTTTTC-TTCCCACTGTTAATGATAAAATCAAAATTTGTCCCTTAAATAAGAGAAACA
63 AGA-AAGCTTTTCTTTCCCACCATTTTTG-TAAAATCAAAGTTCGTGCCTCAAATAAGACAAACA
* * * * * * **
138363 T-GAATATCATACTA-ATTCCCTTTTTTTTCAG
126 TAGATTCTAATA-AAGATTTCCATTCATTTC-G
* * * *
138394 GATTAGGCACCCTAAACATAGTCTTCTC-TTACGGATACAAGATATTGA-CGATTTAGTTTCACA
1 GATTAGGCACCATAAACACAGTCTCCTCATTA-GGATACAAGATATTGATC-ATTTAGTTT-GCA
*
138457 AGAAA-CATTTT-TTTCCCACCAATTTTTG-AAAATTCTAAGTTCGTGCCTCAAATAAGACAAAC
63 AGAAAGC-TTTTCTTTCCCACC-ATTTTTGTAAAA-TCAAAGTTCGTGCCTCAAATAAGACAAAC
* * *
138519 ATAGATTCTAGTAAGGATCTT-TATTCATTTCGG
125 ATAGATTCTAATAAAGAT-TTCCATTCATTTC-G
* * * ** ** *
138552 GATTAGGCACTATAAACACATTCTCCTCATTAGGATAAAAGATATTGATGGTTTTCTTTGCATGG
1 GATTAGGCACCATAAACACAGTCTCCTCATTAGGATACAAGATATTGATCATTTAGTTTGCA-AG
* * * * * * * * * *
138617 AAATCTTTTCTTTACC-TCATTTTTCGTAAAATCAAAGTTAGTACTTTAAATGAGACAAGCATTG
65 AAAGCTTTTCTTTCCCACCATTTTT-GTAAAATCAAAGTTCGTGCCTCAAATAAGACAAACATAG
** * *
138681 ATTCTCGTAATAG-TCTCCATTC-TTTCCAA
129 ATTCTAATAA-AGATTTCCATTCATTT-C-G
* * * * * * * * * *
138710 GATTGGGAACCAAAAACACATTCTCTTCATTAGGATGCACGACATTGATGC-TTTTGCTTTGTAA
1 GATTAGGCACCATAAACACAGTCTCCTCATTAGGATACAAGATATTGAT-CATTTAG-TTTGCAA
* * ** * * * * * *
138774 GAGAAGCTTTTCTTT-CCACCGTTAATAATAAAATCAAAATTTGTCCCTTAAAAAAGAGAAACAT
64 GA-AAGCTTTTCTTTCCCACCATT-TTTGTAAAATCAAAGTTCGTGCCTCAAATAAGACAAACAT
* * * * ** *
138838 -GAATACTCATACTA-ATTCCCATTTTTTTTAG
127 AG-ATTCTAATA-AAGATTTCCA-TTCATTTCG
* * ** * *
138869 GATTAGGCACCCTAAACATAGTCTTTTC-TTACAGATACAAGATATTGATCATTTAGTTTCGTAA
1 GATTAGGCACCATAAACACAGTCTCCTCATTA-GGATACAAGATATTGATCATTTAGTTT-GCAA
* * *
138933 GAAA-CTTTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATAAGACAAACATA
64 GAAAGCTTTTCTTTCCCACC-ATTTTTGTAAAATCAAAGTTCGTGCCTCAAATAAGACAAACATA
* *
138997 GATTCTAATAAAGATTTTCATTCATTTTG
128 GATTCTAATAAAGATTTCCATTCATTTCG
* * *
139026 TGATTAGGCACTATAAACACATTCTCCCCATTAGGATA-AATGATATTGAT
1 -GATTAGGCACCATAAACACAGTCTCCTCATTAGGATACAA-GATATTGAT
139076 GGTTTTCTTT
Statistics
Matches: 734, Mismatches: 199, Indels: 131
0.69 0.19 0.12
Matches are distributed among these distances:
156 9 0.01
157 114 0.16
158 340 0.46
159 263 0.36
160 5 0.01
161 3 0.00
ACGTcount: A:0.32, C:0.18, G:0.14, T:0.36
Consensus pattern (156 bp):
GATTAGGCACCATAAACACAGTCTCCTCATTAGGATACAAGATATTGATCATTTAGTTTGCAAGA
AAGCTTTTCTTTCCCACCATTTTTGTAAAATCAAAGTTCGTGCCTCAAATAAGACAAACATAGAT
TCTAATAAAGATTTCCATTCATTTCG
Found at i:140203 original size:476 final size:475
Alignment explanation
Indices: 139228--148275 Score: 9704
Period size: 476 Copynumber: 18.9 Consensus size: 475
139218 GATACATGAC
* * * * * **
139228 ATTGATAGAATCGAAGTTTATCTATTAAATAAGATAAACATGAATACACATACTAATCCACATTC
1 ATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCACATTC
* * * * * * * *
139293 TTTTCTAGATTAGGCCCCATAAACAAATTCCTCTAAAAAGGATACATGATATTGATGCTTTGGTT
66 TTTT-TGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTT
* * * * * * * *
139358 TCGCAAAAAACACTTTCTTCCCACCAATTTTTGTTAATTCA-AATTTC-GTGCCCCAAATGAGAT
130 TCGCAAGAAACGCTTTCTTCCCACCAATTTTTGTAAAGT-ATGAGTTCATTG-CTCAAATGAGA-
* * * *
139421 C-AGCAAGGATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCACTATAAACACAATCTCCT
192 CAAACAAGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCC
* * * *
139485 CATTAGGATAAACGATATTGATGGTTTTTTTTTTGCGTGGAAATCCTTTT-TTTGCCTTATTTTC
257 CAATAGGATAAATGATATTGATGG-TTTTCTTTTGCCTGGAAAT-CTTTTCTTTGCCTTATTTTC
* * * *
139549 CTTAAAATCAAAGTTTATACTTTGAATGAGACATGCGTTGATTCTCGCAAAAGTCTCCATTCTTT
320 CTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTT
* *
139614 TCAAGATTGGGAACCAAAATCACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCG
385 TCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCG
* *
139679 CAAGAGAAGCTTTTCTTTCC-ACCGTT
450 CAAGAGAAGCTTTTC-TTCCTAACATT
* * * * * * *
139705 GTTGATAGAATCAAAG-TTGTCTCTTAAGTAAGACAAACGTTAATACTCATACTAATCCCCATTC
1 ATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCACATTC
* * *
139769 TTTTTAGGATTAGGCACCATAAACATAGTCTTTTCATAAGGATACATGATCTTGATGCTTTGGTT
66 TTTTT-GGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTT
* * * * *
139834 TCGCAGGATAA-GCTTTCTTCTCACCAATTTTTGTAAAGTATGAGTTTACTGCTCAAATGAGAAA
130 TCGCAAGA-AACGCTTTCTTCCCACCAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAGACA
* ** * * *
139898 AACAAGGATTCTTGTTGGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTTCTCT
194 AACAAGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCCCA
* * * *
139963 TTAGGATAAATGATATTTATGGTTTTCTTTTGCAC-GAAAATCTTTTCTTTGTCTTATTTTCCTT
259 ATAGGATAAATGATATTGATGGTTTTCTTTTGC-CTGGAAATCTTTTCTTTGCCTTATTTTCCTT
140027 AAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCA
323 AAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCA
* * **
140092 ACATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATTACATTGATGCTTTGGTGTTACAA
388 AGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAA
*
140157 GA-AAGGCTTTTCTTCCCAACATT
453 GAGAA-GCTTTTCTTCCTAACATT
* * ** *
140180 ATCGATAAAATCAAAATTTGTCTCTTAAATAAGACAAAGTTGAATACTCATACTAATCC-CATTC
1 ATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCACATTC
* * * * **
140244 TTTTTAGGATTAGGCACCATTAACATAGTCTTCTTATATGGATACAGGATATTC-ATGAATTGGT
66 TTTTT-GGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATA-TCGATGCTTTGGT
* * * * * * * *
140308 TTCCCAAGAAACGTTTTTTTCCCA-TAATTTTTGTAGATTCT-ATGTT--TGTGCCTTAAATGAG
129 TTCGCAAGAAACGCTTTCTTCCCACCAATTTTTGTAAAGTATGA-GTTCAT-TG-CTCAAATGAG
* * *
140369 AGAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATACTCC
191 ACAAACAAGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCC
* * * * *
140434 TCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGACTTGTTTTCC
256 CCAATAGGATAAATGATATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCC
* * *
140499 TTAAAATCAGAGTTTGTACTTTAAATGAGACATGCATTGATTCCCGTAAAAGTCTCCACTCTTTT
321 TTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTT
140564 CAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGC
386 CAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGC
* * * *
140629 AAGATAAGCTGTTCTCCCTACCATT
451 AAGAGAAGCTTTTCTTCCTAACATT
* *
140654 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCACTTTC
1 ATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCACATTC
* * *
140719 TTTTCTGGATTAGGCACCATAAACATTGTCTTCTTATAAGGACACATGATATCGATGCTTTGGTT
66 TTTT-TGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTT
* * * *
140784 TCGTAAGAAACGCTTTCTTCCCCCCAATTTTTGAAAAGTA-GAAGCTCATT-CTTCAAATGAGAC
130 TCGCAAGAAACGCTTTCTTCCCACCAATTTTTGTAAAGTATG-AGTTCATTGC-TCAAATGAGAC
* *
140847 AAAGATA-GATTCTAGTAAGGATCTTCATTCATTTCGTGGTTAGGCACTATAAACACATTCTCCC
193 AAACA-AGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCC
*
140911 CAATAGGATAAATGATATTGATGGTTTTCTTCTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCT
257 CAATAGGATAAATGATATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCT
* * * * *
140976 TAAAATCAAAGCTTGTACTGTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCTATTCTTTCC
322 TAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTC
* * * *
141041 ATGATTAGGAACCAAAAACGCAATT-CCTTCATTAGAATACATGACATTGATGCTTTGGTGTCGC
387 AAGATTGGGAACCAAAAACAC-ATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGC
* *
141105 AATAGAAGCTTTTCTTTCTAACATT
451 AAGAGAAGCTTTTCTTCCTAACATT
* * * * * * * *
141130 GTTGATAAAATCAAAGTTTGTCTCTTATACAAGACAAACTTGAGTAGTCATAGTAATCCA-TTTT
1 ATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCACATTC
* * * *
141194 TTTTCTGGACTAGGCGCCATAAACATAGTCTTCCCATAAGGATACATGATATCAATGCTTTGGTT
66 TTTT-TGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTT
* * * * * * * *
141259 TTGTAAGAAATGCTTTCTTCCCACCAATTTTTGAAAAGCATAAGTTCATTCCTCAAATTAGACAA
130 TCGCAAGAAACGCTTTCTTCCCACCAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAGACAA
* * *
141324 ACAAGGATTCTAGTAAGGATTTTCAGTCATTTCGTGGTTAGGCACTATAAACACATTCTCCCCAA
195 ACAAGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCCCAA
* * **
141389 TAGGATCAATGATATTGATGGTTTTCTTTTGCCTGGAAATTTTTTCTTTGTGTTATTTTCCTTAA
260 TAGGATAAATGATATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAA
* * *
141454 AATCAAAGTTTGTACTTTAAATAAGACATGTATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAC
325 AATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAG
* * *
141519 ATTGGGAGCCAAAAACACATTCCCTTCGTTAGGATACACGACATTGATGCTTTGGTGTCGCAAGA
390 ATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGA
* * * * *
141584 GAAGCTGTTCTCCCCACCGTT
455 GAAGCTTTTCTTCCTAACATT
* * * **
141605 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAAGAATCATACTAATCCATTTTC
1 ATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCACATTC
*
141670 TTTTTTGGATTAGGCACCATAAACATAGTCTTTTCATAAGGATACATGATATCGATGCTTTGGTT
66 -TTTTTGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTT
* * * * * * *
141735 TCGTAAGAAACGCTTTTTTCCCACTAATTTTTG-AAACGTATAAGTTCATTACCCAAATAAGACA
130 TCGCAAGAAACGCTTTCTTCCCACCAATTTTTGTAAA-GTATGAGTTCATTGCTCAAATGAGACA
* *
141799 AACATGGATTCTAGAAAGGATCTTCATTCATTTCGTTG-TTAGGCACTATAAACACATTCTCCCC
194 AACAAGGATTCTAGTAAGGATCTTCATTCATTTCG-TGATTAGGCACTATAAACACATTCTCCCC
*
141863 AATAGGATAAATGATATTGATGGTTTTCTTTTGCCTGAAAATCTTTTCTTTGCCTTATTTTCCTT
258 AATAGGATAAATGATATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTT
* * * * * *
141928 AAAATCAAAGATTGCACTTTAAATGAGACAAGCATAGATTCTCGTAAAAGTCTCCACTCTTTCCA
323 AAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCA
* * *
141993 AGATTGGGAACCAACAACACATTCCCTTCATTAGAATACATGACATTGATGCTTTGGTGTCACAA
388 AGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAA
* *
142058 GAGAAGCTTTTCTTTCTAACGTT
453 GAGAAGCTTTTCTTCCTAACATT
* * *
142081 GTTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATAATAATCCACTTTC
1 ATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCACATTC
* *
142146 TTTTCTGGATT-GGCACCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTT
66 TTTT-TGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTT
* * * * *
142210 CCACAAGATATGCTTTCTTCTCACCAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAGACAA
130 TCGCAAGAAACGCTTTCTTCCCACCAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAGACAA
* * * * * * * * *
142275 ACATGGATTCTTGTAGGGATCTTCATTAATTTCCTAATTAAGCACTATAAACACATTCTCCTCAT
195 ACAAGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCCCAA
* * * * * * *
142340 TACGATAAAAGATATTTATGATTTTCTTTTGCATTGAAATCTTTTCTTTGTCTTATTTTCCTTAA
260 TAGGATAAATGATATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAA
* *
142405 AATCAAAGTTTGTACTTTAAATAAGACATGCATTGATTCTCGTAAAAGTATCCATTCTTTTCAAG
325 AATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAG
* * *
142470 ATTGGGAACCAAAAACACTTTCCCTTCGTTAGGATACTTGACATTGATGCTTTGGTGTCGCAAGA
390 ATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGA
* * *
142535 GAAGCTTTGGT-TTCGTAAGA-A
455 GAAGCTTT--TCTTCCTAACATT
** *** * ** ** * * ** *** *
142556 ACGCTTTCTTCCCACCAATTTTTGTAACGT--ATAAGTTCATGCCCCAAATAAG-GATAC--A--
1 A----TTGATAAAATCAAAGTTTGTCTCTTAAATAAG-ACA-AACATGAAT-AGTCATACTAATC
* ** * ** * **
142614 -AGA-TC---TT-GATTAGGCACCGCAAACATAGTCTTCTCATAAGGAT-TA-GGCACCGCAAAC
59 CACATTCTTTTTGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATCG-ATGC
* * * * * * * **
142671 -ATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTCCACAAGATATGCTTTCT--TCT
123 TTTGGT-TTCGC--AA-GA-A-ACG--CTT--T-C--T--TCCCACCA-AT-T--TTTGTAAAGT
** * * * * ** * ** * ** * * ***
142733 CACCAATT-TTTG-TAAAGTATGAGTTCATTGCTCAAATGAGACAAACATGGATTCTTGTAGGGA
169 -ATGAGTTCATTGCTCAA--ATGAG-ACA---AAC-AAGGATTCTAGTAAGGA-TCTT-CATTCA
* *** * * * * *
142796 TCTTCGTTAATTTCCTAATTAGGCACTATAAACACATTCTCCTCATTACGATAAAAGATATTTAT
224 T-TTCG-TGA--T--TAGGCA----CTATAAACACATTCTCCCCAATAGGATAAATGATATTGAT
* * * *
142861 GATTTTCTTTTGCATTGAAATCTTTTCTTTGTCTTATTTTCCTTAAAATCAAAGTTTGTACTTTA
279 GGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTA
* *
142926 AATAAGACATGCATTGATTCTCGTAAAAGTATCCATTCTTTTCAAGATTGGGAACCAAAAACACA
344 AATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACA
* * * *
142991 TTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGATAAGCTGTTCTCCCTACCA
409 TTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTCCTAACA
143056 TT
474 TT
* *
143058 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCACTTTC
1 ATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCACATTC
* * *
143123 TTTTCTGGATTAGGCACCATAAACATTGTCTTCTTATAAGGACACATGATATCGATGCTTTGGTT
66 TTTT-TGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTT
* * * *
143188 TCGTAAGAAACGCTTTCTTCCCCCCAATTTTTGAAAAGTA-GAAGCTCATT-CTTCAAATGAGAC
130 TCGCAAGAAACGCTTTCTTCCCACCAATTTTTGTAAAGTATG-AGTTCATTGC-TCAAATGAGAC
* *
143251 AAAGATA-GATTCTAGTAAGGATCTTCATTCATTTCGTGGTTAGGCACTATAAACACATTCTCCC
193 AAACA-AGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCC
*
143315 CAATAGGATAAATGATATTGATGGTTTTCTTCTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCT
257 CAATAGGATAAATGATATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCT
* * * * *
143380 TAAAATCAAAGCTTGTACTATAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCTATTCTTTCC
322 TAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTC
* * * *
143445 ATGATTAGGAACCAAAAACGCAATT-CCTTCATTAGAATACATGACATTGATGCTTTGGTGTCGC
387 AAGATTGGGAACCAAAAACAC-ATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGC
* *
143509 AATAGAAGCTTTTCTTTCTAACATT
451 AAGAGAAGCTTTTCTTCCTAACATT
* * * * * * * *
143534 GTTGATAAAATCAAAGTTTGTCTCTTATACAAGACAAACTTGAGTAGTCATAGTAATCCA-TTTT
1 ATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCACATTC
* * * *
143598 TTTTCTGGACTAGGCGCCATAAACATAGTCTTCCCATAAGGATACATGATATCAATGCTTTGGTT
66 TTTT-TGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTT
* * * * * * * *
143663 TTGTAAGAAATGCTTTCTTCCCACCAATTTTTGAAAAGCATAAGTTCATTCCTCAAATTAGACAA
130 TCGCAAGAAACGCTTTCTTCCCACCAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAGACAA
* * *
143728 ACAAGGATTCTAGTAAGGATTTTCAGTCATTTCGTGGTTAGGCACTATAAACACATTCTCCCCAA
195 ACAAGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCCCAA
* * **
143793 TAGGATCAATGATATTGATGGTTTTCTTTTGCCTGGAAATTTTTTCTTTGTGTTATTTTCCTTAA
260 TAGGATAAATGATATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAA
* * * *
143858 AATCAAAGGTTGTACTTTAAATAAGACATGTATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAC
325 AATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAG
* * *
143923 ATTGGGAGCCAAAAACACATTCCCTTCGTTAGGATACACGACATTGATGCTTTGGTGTCGCAAGA
390 ATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGA
* * * * *
143988 GAAGCTGTTCTCCCCACCGTT
455 GAAGCTTTTCTTCCTAACATT
* * **
144009 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAAGAGTCATACTAATCCATTTTC
1 ATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCACATTC
*
144074 TTTTTTGGATTAGGCACCATAAACATAGTCTTTTCATAAGGATACATGATATCGATGCTTTGGTT
66 -TTTTTGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTT
* * * * * * *
144139 TCGTAAGAAACGCTTTTTTCCCACTAATTTTTG-AAACGTATAAGTTCATTACCCAAATAAGACA
130 TCGCAAGAAACGCTTTCTTCCCACCAATTTTTGTAAA-GTATGAGTTCATTGCTCAAATGAGACA
* *
144203 AACATGGATTCTAGAAAGGATCTTCATTCATTTCGTTG-TTAGGCACTATAAACACATTCTCCCC
194 AACAAGGATTCTAGTAAGGATCTTCATTCATTTCG-TGATTAGGCACTATAAACACATTCTCCCC
*
144267 AATAGGATAAATGATATTGATGGTTTTCTTTTGCCTGAAAATCTTTTCTTTGCCTTATTTTCCTT
258 AATAGGATAAATGATATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTT
* * * * * *
144332 AAAATCAAAGATTGCACTTTAAATGAGACAAGCATAGATTCTCGTAAAAGTCTCCACTCTTTCCA
323 AAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCA
* * *
144397 AGATTGGGAACCAACAACACATTCCCTTCATTAGAATACATGACATTGATGCTTTGGTGTCACAA
388 AGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAA
* *
144462 GAGAAGCTTTTCTTTCTAACGTT
453 GAGAAGCTTTTCTTCCTAACATT
* * *
144485 GTTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATAATAATCCACTTTC
1 ATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCACATTC
* *
144550 TTTTCTGGATT-GGCACCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTT
66 TTTT-TGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTT
* * * * *
144614 CCACAAGATATGCTTTCTTCTCACCAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAGACAA
130 TCGCAAGAAACGCTTTCTTCCCACCAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAGACAA
* * * * * * * * *
144679 ACATGGATTCTTGTAGGGATCTTCATTAATTTCCTAATTAAGCACTATAAACACATTCTCCTCAT
195 ACAAGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCCCAA
* * * * * * *
144744 TACGATAAAAGATATTTATGATTTTCTTTTGCATTGAAATCTTTTCTTTGTCTTATTTTCCTTAA
260 TAGGATAAATGATATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAA
* *
144809 AATCAAAGTTTGTACTTTAAATAAGACATGCATTGATTCTCGTAAAAGTATCCATTCTTTTCAAG
325 AATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAG
* * *
144874 ATTGGGAACCAAAAACACTTTCCCTTCGTTAGGATACTTGACATTGATGCTTTGGTGTCGCAAGA
390 ATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGA
* * *
144939 GAAGCTTTGGT-TTCGTAAGA-A
455 GAAGCTTT--TCTTCCTAACATT
** *** * ** ** * * ** *** *
144960 ACGCTTTCTTCCCACCAATTTTTGTAACGT--ATAAGTTCATGCCCCAAATAAG-GATAC--A--
1 A----TTGATAAAATCAAAGTTTGTCTCTTAAATAAG-ACA-AACATGAAT-AGTCATACTAATC
* ** * ** * **
145018 -AGA-TC---TT-GATTAGGCACCGCAAACATAGTCTTCTCATAAGGAT-TA-GGCACCGCAAAC
59 CACATTCTTTTTGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATCG-ATGC
* * * * * * * **
145075 -ATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTCCACAAGATATGCTTTCT--TCT
123 TTTGGT-TTCGC--AA-GA-A-ACG--CTT--T-C--T--TCCCACCA-AT-T--TTTGTAAAGT
** * * * * ** * ** * ** * * ***
145137 CACCAATT-TTTG-TAAAGTATGAGTTCATTGCTCAAATGAGACAAACATGGATTCTTGTAGGGA
169 -ATGAGTTCATTGCTCAA--ATGAG-ACA---AAC-AAGGATTCTAGTAAGGA-TCTT-CATTCA
* * *** * * * * *
145200 TCTTCATTAATTTCCTAATTAGGCACTATAAACACATTCTCCTCATTACGATAAAAGATATTTAT
224 T-TTC-GTGA--T--TAGGCA----CTATAAACACATTCTCCCCAATAGGATAAATGATATTGAT
* * ** * *
145265 GATTTTCTATTGTATTGAAATCTTTTCTTTGTCTTATTTTCCTTAAAATCAAAGTTTGTACTTTA
279 GGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTA
* *
145330 AATAAGACATGCATTGATTCTCGTAAAAGTATCCATTCTTTTCAAGATTGGGAACCAAAAACACA
344 AATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACA
* * * *
145395 TTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGATAAGCTGTTCTCCCTACCA
409 TTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTCCTAACA
145460 TT
474 TT
* *
145462 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCACTTTC
1 ATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCACATTC
* * *
145527 TTTTCTGGATTAGGCACCATAAACATTGTCTTCTTATAAGGACACATGATATCGATGCTTTGGTT
66 TTTT-TGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTT
* * * *
145592 TCGTAAGAAACGCTTTCTTCCCCCCAATTTTTGAAAAGTA-GAAGCTCATT-CTTCAAATGAGAC
130 TCGCAAGAAACGCTTTCTTCCCACCAATTTTTGTAAAGTATG-AGTTCATTGC-TCAAATGAGAC
* *
145655 AAAGATA-GATTCTAGTAAGGATCTTCATTCATTTCGTGGTTAGGCACTATAAACACATTCTCCC
193 AAACA-AGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCC
*
145719 CAATAGGATAAATGATATTGATGGTTTTCTTCTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCT
257 CAATAGGATAAATGATATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCT
* * * * *
145784 TAAAATCAAAGCTTGTACTATAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCTATTCTTTCC
322 TAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTC
* * * *
145849 ATGATTAGGAACCAAAAACGCAATT-CCTTCATTAGAATACATGACATTGATGCTTTGGTGTCGC
387 AAGATTGGGAACCAAAAACAC-ATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGC
* *
145913 AATAGAAGCTTTTCTTTCTAACATT
451 AAGAGAAGCTTTTCTTCCTAACATT
* * * * * * ** *
145938 GTTGATAAAATCAAAGTTTGTCTCTTATACAAGACAAACTTGAGTAGTCATAGTAATCCATTTTT
1 ATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCACATTC
* * * *
146003 TTTTCTGGACTAGGCGCCATAAACATAGTCTTCCCATAAGGATACATGATATCAATGCTTTGGTT
66 TTTT-TGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTT
* * * * * * * *
146068 TTGTAAGAAATGCTTTCTTCCCACCAATTTTTGAAAAGCATAAGTTCATTCCTCAAATTAGACAA
130 TCGCAAGAAACGCTTTCTTCCCACCAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAGACAA
* * *
146133 ACAAGGATTCTAGTAAGGATTTTCAGTCATTTCGTGGTTAGGCACTATAAACACATTCTCCCCAA
195 ACAAGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCCCAA
* * **
146198 TAGGATCAATGATATTGATGGTTTTCTTTTGCCTGGAAATTTTTTCTTTGTGTTATTTTCCTTAA
260 TAGGATAAATGATATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAA
* * *
146263 AATCAAAGTTTGTACTTTAAATAAGACATGTATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAC
325 AATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAG
* *
146328 ATTGGGAGCCAAAAACACATTCCCTTCGTTAGGATACATGACATTGATGCTTTGGTGTCGCAAGA
390 ATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGA
* * * * *
146393 GAAGCTGTTCTCCCCACCGTT
455 GAAGCTTTTCTTCCTAACATT
* * **
146414 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAAGAGTCATACTAATCCATTTTC
1 ATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCACATTC
*
146479 TTTTTTGGATTAGGCACCATAAACATAGTCTTTTCATAAGGATACATGATATCGATGCTTTGGTT
66 -TTTTTGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTT
* * * * * * *
146544 TCGTAAGAAACGCTTTTTTCCCACTAATTTTTG-AAACGTATAAGTTCATTACCCAAATAAGACA
130 TCGCAAGAAACGCTTTCTTCCCACCAATTTTTGTAAA-GTATGAGTTCATTGCTCAAATGAGACA
* *
146608 AACATGGATTCTAGAAAGGATCTTCATTCATTTCGTTG-TTAGGCACTATAAACACATTCTCCCC
194 AACAAGGATTCTAGTAAGGATCTTCATTCATTTCG-TGATTAGGCACTATAAACACATTCTCCCC
*
146672 AATAGGATAAATGATATTGATGGTTTTCTTTTGCCTGAAAATCTTTTCTTTGCCTTATTTTCCTT
258 AATAGGATAAATGATATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTT
* * * * * * *
146737 AAAATCAAAGATAGCACTTTAAATGAGACAAGCATAGATTCTCGTAAAAGTCTCCACTCTTTCCA
323 AAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCA
* * *
146802 AGATTGGGAACCAACAACACATTCCCTTCATTAGAATACATGACATTGATGCTTTGGTGTCACAA
388 AGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAA
* * *
146867 AAGAAGCTTTTCTTTCTAACGTT
453 GAGAAGCTTTTCTTCCTAACATT
* * *
146890 GTTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATAATAATCCACTTTC
1 ATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCACATTC
* * * **
146955 TTTTCTAGATT-GGCAGCATAAACATAGTCTTCTCATAAGGATACATGATCTTAATGCTTTGGTT
66 TTTT-TGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTT
* * * * * * *
147019 CCACAAGATATGCTTTCTTCTCACCAATTTTTGTAAAGTATGAATTCGTTGCTCAAATGAGACAA
130 TCGCAAGAAACGCTTTCTTCCCACCAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAGACAA
* * * *
147084 ACATGGATTCTTGTAGGGATCTTCATTAATTTCGTTG-TTAGGCACTATAAACACATTCTCCCCA
195 ACAAGGATTCTAGTAAGGATCTTCATTCATTTCG-TGATTAGGCACTATAAACACATTCTCCCCA
*
147148 ATAGGATAAATGATATTGATGGTTTTCTTTTGCCTGAAAATCTTTTCTTTGCCTTATTTTCCTTA
259 ATAGGATAAATGATATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTA
* * * * * *
147213 AAATCAAAGATTGCACTTTAAATGAGACAAGCATAGATTCTCGTAAAAGTCTCCACTCTTTCCAA
324 AAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAA
* * *
147278 GATTGGGAACCAACAACACATTCCCTTCATTAGAATACATGACATTGATGCTTTGGTGTCACAAG
389 GATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAG
*
147343 AGAAGCTTTTCCTT-CTAACGTT
454 AGAAGCTTTT-CTTCCTAACATT
* * * * *
147365 GTTGATAAAATCAAAGTTTGTCTCTTAAATAAGGCAAACTTGAATACTCATACTAATCCCCATTC
1 ATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCACATTC
* ** * * *
147430 TTTTCAGGATTAACCACCATAAACATAGTCTTTTTATAAGGATACATGATATTGATGCTTTGGTT
66 TTTT-TGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTT
* * * * * * ****
147495 TTGCAAGAAACACTTTCTTCCCACCAATTTTAGTAAATTCTAAGTTCGCCCCTCAAATGAGACAA
130 TCGCAAGAAACGCTTTCTTCCCACCAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAGACAA
* * * * *
147560 ACATGGATTCTAGTAGGGGTCATCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCC-
195 ACAAGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCC-CCA
* * * * * * * *
147624 TTAGGATAAACGATATTGATGGTTTTCTTTTTCATGAAAATATTTTCTTTGCATTA-TTTCCATA
259 ATAGGATAAATGATATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTA
* * *
147688 AAATCAAAGTTTGTACTTTAAATGAAACAAGCATTGATTCGCGTAAAAGTCTCCATT-TTTTCCA
324 AAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTT-CA
*
147752 AGATTGGAAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAA
388 AGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAA
* *
147817 GAGAAGCTTTTCTTTCTTAA-GTT
453 GAGAAGCTTTTC-TTCCTAACATT
* * * * * * *
147840 GTTGATAAAATC-AAGTTTCTCTCTTAAATAAGGCAAACTTGAGTACTCATACTAATCCCCATTC
1 ATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCACATTC
** * * * * ** *
147904 TTTTCAAGATTAGCCACCATAAACATAGTCTTCTGATACGGATACAAGA-ATTTTATGATTTGGT
66 TTTT-TGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATA-TCGATGCTTTGGT
* * * * * * * *
147968 TTCACTAGGAACGCTTTTTTCCCA-CAATTTTTGTAGATTCT-ATGTTC-GTGCCTCAAATGAGA
129 TTCGCAAGAAACGCTTTCTTCCCACCAATTTTTGTAAAGTATGA-GTTCATTG-CTCAAATGAGA
* * * * * *
148030 TAAACATGGATTCTAGTAAGAATCATCATTCATTTCGTGATTAGGCACCATAAACACATTCTTCT
192 CAAACAAGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTC-TCC
** * * *
148095 CC--TCAGGATGCATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTTTTTG-CTTCACTTT
256 CCAAT-AGGATAAATGATATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTT-ATTTT
*
148157 CCTTAAAATCAAAGTTTGTACTTTAAATGAGAGATGCATTGATTCTCGTAAAAGTCTCCATTC-T
319 CCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTT
* ** * * *
148221 TTCTAACATTGGGAAAAAAAAAGACATTCCCTTTATTAGGATACAAGACATTGAT
384 TTC-AAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGAT
148276 AGAATCAAAG
Statistics
Matches: 7274, Mismatches: 1068, Indels: 461
0.83 0.12 0.05
Matches are distributed among these distances:
467 10 0.00
468 20 0.00
469 60 0.01
470 6 0.00
471 4 0.00
472 4 0.00
473 145 0.02
474 597 0.08
475 2439 0.34
476 3011 0.41
477 66 0.01
478 7 0.00
479 42 0.01
480 12 0.00
482 12 0.00
483 10 0.00
484 12 0.00
485 25 0.00
486 18 0.00
487 8 0.00
488 18 0.00
489 4 0.00
490 16 0.00
491 8 0.00
492 16 0.00
493 22 0.00
494 14 0.00
495 10 0.00
496 12 0.00
497 4 0.00
498 54 0.01
499 4 0.00
500 16 0.00
501 12 0.00
502 438 0.06
503 8 0.00
504 4 0.00
505 4 0.00
506 2 0.00
507 6 0.00
508 6 0.00
509 62 0.01
510 12 0.00
511 14 0.00
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.36
Consensus pattern (475 bp):
ATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCACATTC
TTTTTGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTT
CGCAAGAAACGCTTTCTTCCCACCAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAGACAAA
CAAGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCCCAAT
AGGATAAATGATATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAA
ATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGA
TTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAG
AAGCTTTTCTTCCTAACATT
Found at i:141694 original size:951 final size:950
Alignment explanation
Indices: 139229--149625 Score: 12152
Period size: 951 Copynumber: 10.9 Consensus size: 950
139219 ATACATGACA
* * * * * * ** *
139229 TTGATAGAATCGAAGTTTATCTATTAAATAAGATAAACATGAATACACATACTAATCCACATTCT
1 TTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACTTGAATAGTCATACTAATCCA-TTTCT
* * * * * * *
139294 TTTCTAGATTAGGCCCCATAAACAAATTCCTCTAAAAAGGATACATGATATTGATGCTTTGGTTT
65 TTTCTGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTT
* * ** * * * * *
139359 CGCAAAAAACACTTTCTTCCCACCAATTTTTGTTAATTCA-AATTTCGTGCCCCAAATGAGATC-
130 CGCAAGAAACGCTTTCTTCCCACCAATTTTTGAAAAGT-ATAAGTTCATTCCTCAAATGAGA-CA
* * * * *
139422 AGCAAGGATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCACTATAAACACAATCTCCTCA
193 AACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCCCA
* * * * *
139487 TTAGGATAAACGATATTGATGGTTTTTTTTTTGCGTGGAAATCCTTTT-TTTGCCTTATTTTCCT
258 ATAGGATAAATGATATTGATGG-TTTTCTTTTGCCTGGAAAT-CTTTTCTTTGTCTTATTTTCCT
* * * *
139551 TAAAATCAAAGTTTATACTTTGAATGAGACATGCGTTGATTCTCGCAAAAGTCTCCATTCTTTTC
321 TAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTC
* *
139616 AAGATTGGGAACCAAAATCACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCA
386 AAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCA
* ** * * *
139681 AGAGAAGCTTTTCTTTCCACCGTTGTTGATAGAATCAAAG-TTGTCTCTTAAGTAAGACAAACGT
451 AGAGAAGCTGTTCTCCCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAT
* * * *
139745 TAATACTCATACTAATCCCCATTCTTTT-TAGGATTAGGCACCATAAACATAGTCTT-TTCATAA
516 GAATAGTCATACTAATCCACTTTCTTTTCT-GGATTAGGCACCATAAACATAGTCTTCTT-ATAA
* * *
139808 GGATACATGATCTTGATGCTTTGGTTTCGCAGGATAA-GCTTTCTTCTCACCAATTTTTGTAAAG
579 GGATACATGATATTGATGCTTTGGTTTCGCAAGA-AACGCTTTCTTCCCACCAATTTTTGTAAAG
* * * * **
139872 TATG-AGTTTACTGCTCAAATGAGAAAAACA-AGGATTCTTGTTGGGATCTTCATTCATTTCGTG
643 TA-GAAGTTCA-TTCTCAAATGAGACAAACATA-GATTCTAGTAAGGATCTTCATTCATTTCGTG
* * * *
139935 ATTAGGCACTATAAACACATTCTTCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCAC-G
705 ATTAGGCACTATAAACACATTCTCCCCATTAGGATAAATGATATTGATGGTTTTCTTTTGC-CTG
* *
139999 AAAATCTTTTCTTTGTCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTG
769 GAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTG
* *
140064 ATTCTCGTAAAAGTCTCCATTCTTTTCAACATTGGGAACCAAAAACACATTCCCTTCATTAGGAT
834 ATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGAT
* ** * * *
140129 ACATTACATTGATGCTTTGGTGTTACAAGA-AAGGCTTTTCTTCCCAACATTA
899 ACATGACATTGATGCTTTGGTGTCGCAAGAGAA-GCTTTTCTTTCTAACATTG
* * * *
140181 TCGATAAAATCAAAATTTGTCTCTTAAATAAGACAAAGTTGAATACTCATACTAATCCCA-TTCT
1 TTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACTTGAATAGTCATACTAAT-CCATTTCT
* * * * * **
140245 TTT-TAGGATTAGGCACCATTAACATAGTCTTCTTATATGGATACAGGATATTCATGAATTGGTT
65 TTTCT-GGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTT
* * * * * * * * * ** * * *
140309 TCCCAAGAAACGTTTTTTTCCCA-TAATTTTTGTAGATTCTATGTTTGTGCCTTAAATGAGAGAA
129 TCGCAAGAAACGCTTTCTTCCCACCAATTTTTGAAAAGTATAAGTTCATTCCTCAAATGAGACAA
* * *
140373 ACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATACTCCTCAT
194 ACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCCCAA
* * *
140438 TAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGACTTGTTTTCCTTAA
259 TAGGATAAATGATATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGTCTTATTTTCCTTAA
* * *
140503 AATCAGAGTTTGTACTTTAAATGAGACATGCATTGATTCCCGTAAAAGTCTCCACTCTTTTCAAG
324 AATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAG
140568 ATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGA
389 ATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGA
* * *
140633 TAAGCTGTTCTCCCTACCATTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAA
454 GAAGCTGTTCTCCCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAA
* *
140698 TAGTCATACTAATCCACTTTCTTTTCTGGATTAGGCACCATAAACATTGTCTTCTTATAAGGACA
519 TAGTCATACTAATCCACTTTCTTTTCTGGATTAGGCACCATAAACATAGTCTTCTTATAAGGATA
* * * *
140763 CATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTTCTTCCCCCCAATTTTTGAAAAGTAGAAG
584 CATGATATTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAATTTTTGTAAAGTAGAAG
* * *
140828 CTCATTCTTCAAATGAGACAAAGATAGATTCTAGTAAGGATCTTCATTCATTTCGTGGTTAGGCA
649 TTCATTC-TCAAATGAGACAAACATAGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCA
* *
140893 CTATAAACACATTCTCCCCAATAGGATAAATGATATTGATGGTTTTCTTCTGCCTGGAAATCTTT
713 CTATAAACACATTCTCCCCATTAGGATAAATGATATTGATGGTTTTCTTTTGCCTGGAAATCTTT
* * *
140958 TCTTTGCCTTATTTTCCTTAAAATCAAAGCTTGTACTGTAAATGAGACAAGCATTGATTCTCGTA
778 TCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTA
* * * * *
141023 AAAGTCTCTATTCTTTCCATGATTAGGAACCAAAAACGCAATT-CCTTCATTAGAATACATGACA
843 AAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAACAC-ATTCCCTTCATTAGGATACATGACA
*
141087 TTGATGCTTTGGTGTCGCAATAGAAGCTTTTCTTTCTAACATTG
907 TTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCTAACATTG
* * * * *
141131 TTGATAAAATCAAAGTTTGTCTCTTATACAAGACAAACTTGAGTAGTCATAGTAATCCATTTTTT
1 TTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACTTGAATAGTCATACTAATCCATTTCTT
* * * ** *
141196 TTCTGGACTAGGCGCCATAAACATAGTCTTCCCATAAGGATACATGATATCAATGCTTTGGTTTT
66 TTCTGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTC
* * * *
141261 GTAAGAAATGCTTTCTTCCCACCAATTTTTGAAAAGCATAAGTTCATTCCTCAAATTAGACAAAC
131 GCAAGAAACGCTTTCTTCCCACCAATTTTTGAAAAGTATAAGTTCATTCCTCAAATGAGACAAAC
* * * *
141326 AAGGATTCTAGTAAGGATTTTCAGTCATTTCGTGGTTAGGCACTATAAACACATTCTCCCCAATA
196 ATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCCCAATA
* * *
141391 GGATCAATGATATTGATGGTTTTCTTTTGCCTGGAAATTTTTTCTTTGTGTTATTTTCCTTAAAA
261 GGATAAATGATATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGTCTTATTTTCCTTAAAA
* * *
141456 TCAAAGTTTGTACTTTAAATAAGACATGTATTGATTCTCGTAAAAGTCTCCATTCTTTTCAACAT
326 TCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGAT
* * *
141521 TGGGAGCCAAAAACACATTCCCTTCGTTAGGATACACGACATTGATGCTTTGGTGTCGCAAGAGA
391 TGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGA
*
141586 AGCTGTTCTCCCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAAGA
456 AGCTGTTCTCCCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATA
* * *
141651 ATCATACTAATCCATTTTCTTTTTTGGATTAGGCACCATAAACATAGTCTT-TTCATAAGGATAC
521 GTCATACTAATCCACTTTCTTTTCTGGATTAGGCACCATAAACATAGTCTTCTT-ATAAGGATAC
* * * * *
141715 ATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTTTTTCCCACTAATTTTTG-AAACGTATAAG
585 ATGATATTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAATTTTTGTAAA-GTAGAAG
* * * *
141779 TTCATTACCCAAATAAGACAAACATGGATTCTAGAAAGGATCTTCATTCATTTCGTTG-TTAGGC
649 TTCATT-CTCAAATGAGACAAACATAGATTCTAGTAAGGATCTTCATTCATTTCG-TGATTAGGC
* *
141843 ACTATAAACACATTCTCCCCAATAGGATAAATGATATTGATGGTTTTCTTTTGCCTGAAAATCTT
712 ACTATAAACACATTCTCCCCATTAGGATAAATGATATTGATGGTTTTCTTTTGCCTGGAAATCTT
* * * *
141908 TTCTTTGCCTTATTTTCCTTAAAATCAAAGATTGCACTTTAAATGAGACAAGCATAGATTCTCGT
777 TTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGT
* * *
141973 AAAAGTCTCCACTCTTTCCAAGATTGGGAACCAACAACACATTCCCTTCATTAGAATACATGACA
842 AAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACA
* *
142038 TTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTTCTAACGTTG
907 TTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCTAACATTG
* *
142082 TTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATAATAATCCACTTTCT
1 TTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACTTGAATAGTCATACTAATCCA-TTTCT
* *
142147 TTTCTGGATT-GGCACCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTC
65 TTTCTGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTT
* * * * * * *
142211 CACAAGATATGCTTTCTTCTCACCAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAGACAAA
130 CGCAAGAAACGCTTTCTTCCCACCAATTTTTGAAAAGTATAAGTTCATTCCTCAAATGAGACAAA
* * * * * * * *
142276 CATGGATTCTTGTAGGGATCTTCATTAATTTCCTAATTAAGCACTATAAACACATTCTCCTCATT
195 CATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCCCAAT
* * * * * *
142341 ACGATAAAAGATATTTATGATTTTCTTTTGCATTGAAATCTTTTCTTTGTCTTATTTTCCTTAAA
260 AGGATAAATGATATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGTCTTATTTTCCTTAAA
* *
142406 ATCAAAGTTTGTACTTTAAATAAGACATGCATTGATTCTCGTAAAAGTATCCATTCTTTTCAAGA
325 ATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGA
* * *
142471 TTGGGAACCAAAAACACTTTCCCTTCGTTAGGATACTTGACATTGATGCTTTGGTGTCGCAAGAG
390 TTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAG
* * *
142536 AAGCTTTGGTTTCGTAAGAAACGCTTTCTTCCCACCAATTTTTG-TA-ACGT-ATAAGTTCATG-
455 AAGC--T-G--T--T--------C--TC--CCCACC-GTTATTGATAGA-ATCA-AAGTT--TGT
** * * * * * * * *
142597 C-CCCAAATAAGGATACAAGATCTTGATTAGGCA-CCGCAA-ACA-TAGTCTTCTCATAAGGATT
496 CTCTTAAATAA-G--ACAA-A-CATGAATAGTCATAC-TAATCCACT-TTCTTTTC-T--GGATT
** * * * * * *
142658 AGGCACCGCAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTCCACAAGATAT
551 AGGCACCATAAACATAGTCTTCTTATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAC
* *
142723 GCTTTCTTCTCACCAATTTTTGTAAAGTATG-AGTTCATTGCTCAAATGAGACAAACATGGATTC
616 GCTTTCTTCCCACCAATTTTTGTAAAGTA-GAAGTTCATT-CTCAAATGAGACAAACATAGATTC
* * * * * * * * *
142787 TTGTAGGGATCTTCGTTAATTTCCTAATTAGGCACTATAAACACATTCTCCTCATTACGATAAAA
679 TAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCCCATTAGGATAAAT
* * * * *
142852 GATATTTATGATTTTCTTTTGCATTGAAATCTTTTCTTTGTCTTATTTTCCTTAAAATCAAAGTT
744 GATATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTT
* * *
142917 TGTACTTTAAATAAGACATGCATTGATTCTCGTAAAAGTATCCATTCTTTTCAAGATTGGGAACC
809 TGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACC
* *
142982 AAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGATAAGCTGTTC
874 AAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTC
** * *
143047 TCCCTACCATTA
939 TTTCTAACATTG
* *
143059 TTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCACTTTCT
1 TTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACTTGAATAGTCATACTAATCCA-TTTCT
* * * *
143124 TTTCTGGATTAGGCACCATAAACATTGTCTTCTTATAAGGACACATGATATCGATGCTTTGGTTT
65 TTTCTGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTT
* * * * *
143189 CGTAAGAAACGCTTTCTTCCCCCCAATTTTTGAAAAGTAGAAGCTCATTCTTCAAATGAGACAAA
130 CGCAAGAAACGCTTTCTTCCCACCAATTTTTGAAAAGTATAAGTTCATTCCTCAAATGAGACAAA
* * *
143254 GATAGATTCTAGTAAGGATCTTCATTCATTTCGTGGTTAGGCACTATAAACACATTCTCCCCAAT
195 CATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCCCAAT
* *
143319 AGGATAAATGATATTGATGGTTTTCTTCTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAA
260 AGGATAAATGATATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGTCTTATTTTCCTTAAA
* * * * * *
143384 ATCAAAGCTTGTACTATAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCTATTCTTTCCATGA
325 ATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGA
* * * *
143449 TTAGGAACCAAAAACGCAATT-CCTTCATTAGAATACATGACATTGATGCTTTGGTGTCGCAATA
390 TTGGGAACCAAAAACAC-ATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGA
* ** * * * * * * * * *
143513 GAAGCTTTTCTTTCTAACATTGTTGATAAAATCAAAGTTTGTCTCTTATACAAGACAAACTTGAG
454 GAAGCTGTTCTCCCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAA
* * * * **
143578 TAGTCATAGTAATCCA-TTTTTTTTCTGGACTAGGCGCCATAAACATAGTCTTCCCATAAGGATA
519 TAGTCATACTAATCCACTTTCTTTTCTGGATTAGGCACCATAAACATAGTCTTCTTATAAGGATA
** * * * * * *
143642 CATGATATCAATGCTTTGGTTTTGTAAGAAATGCTTTCTTCCCACCAATTTTTGAAAAGCATAAG
584 CATGATATTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAATTTTTGTAAAGTAGAAG
* * * *
143707 TTCATTCCTCAAATTAGACAAACA-AGGATTCTAGTAAGGATTTTCAGTCATTTCGTGGTTAGGC
649 TTCATT-CTCAAATGAGACAAACATA-GATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGC
* * *
143771 ACTATAAACACATTCTCCCCAATAGGATCAATGATATTGATGGTTTTCTTTTGCCTGGAAATTTT
712 ACTATAAACACATTCTCCCCATTAGGATAAATGATATTGATGGTTTTCTTTTGCCTGGAAATCTT
** * * *
143836 TTCTTTGTGTTATTTTCCTTAAAATCAAAGGTTGTACTTTAAATAAGACATGTATTGATTCTCGT
777 TTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGT
* * * * *
143901 AAAAGTCTCCATTCTTTTCAACATTGGGAGCCAAAAACACATTCCCTTCGTTAGGATACACGACA
842 AAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACA
* ** * * * *
143966 TTGATGCTTTGGTGTCGCAAGAGAAGCTGTTCTCCCCACCGTTA
907 TTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCTAACATTG
* * *
144010 TTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAAGAGTCATACTAATCCATTTTCT
1 TTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACTTGAATAGTCATACTAATCCA-TTTCT
* * *
144075 TTTTTGGATTAGGCACCATAAACATAGTCTTTTCATAAGGATACATGATATCGATGCTTTGGTTT
65 TTTCTGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTT
* * * * *
144140 CGTAAGAAACGCTTTTTTCCCACTAATTTTTGAAACGTATAAGTTCATTACC-CAAATAAGACAA
130 CGCAAGAAACGCTTTCTTCCCACCAATTTTTGAAAAGTATAAGTTCATT-CCTCAAATGAGACAA
*
144204 ACATGGATTCTAGAAAGGATCTTCATTCATTTCGTTG-TTAGGCACTATAAACACATTCTCCCCA
194 ACATGGATTCTAGTAAGGATCTTCATTCATTTCG-TGATTAGGCACTATAAACACATTCTCCCCA
* *
144268 ATAGGATAAATGATATTGATGGTTTTCTTTTGCCTGAAAATCTTTTCTTTGCCTTATTTTCCTTA
258 ATAGGATAAATGATATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGTCTTATTTTCCTTA
* * * * * *
144333 AAATCAAAGATTGCACTTTAAATGAGACAAGCATAGATTCTCGTAAAAGTCTCCACTCTTTCCAA
323 AAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAA
* * *
144398 GATTGGGAACCAACAACACATTCCCTTCATTAGAATACATGACATTGATGCTTTGGTGTCACAAG
388 GATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAG
* ** * * * *
144463 AGAAGCTTTTCTTTCTAACGTTGTTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGA
453 AGAAGCTGTTCTCCCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGA
* *
144528 ATAGTCATAATAATCCACTTTCTTTTCTGGATT-GGCACCATAAACATAGTCTTCTCATAAGGAT
518 ATAGTCATACTAATCCACTTTCTTTTCTGGATTAGGCACCATAAACATAGTCTTCTTATAAGGAT
* * * * * *
144592 ACATGATCTTGATGCTTTGGTTCCACAAGATATGCTTTCTTCTCACCAATTTTTGTAAAGTATG-
583 ACATGATATTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAATTTTTGTAAAGTA-GA
* * * * * * *
144656 AGTTCATTGCTCAAATGAGACAAACATGGATTCTTGTAGGGATCTTCATTAATTTCCTAATTAAG
647 AGTTCATT-CTCAAATGAGACAAACATAGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGG
* * * * * * *
144721 CACTATAAACACATTCTCCTCATTACGATAAAAGATATTTATGATTTTCTTTTGCATTGAAATCT
711 CACTATAAACACATTCTCCCCATTAGGATAAATGATATTGATGGTTTTCTTTTGCCTGGAAATCT
* *
144786 TTTCTTTGTCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATAAGACATGCATTGATTCTCG
776 TTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCG
* * * * *
144851 TAAAAGTATCCATTCTTTTCAAGATTGGGAACCAAAAACACTTTCCCTTCGTTAGGATACTTGAC
841 TAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGAC
** * *
144916 ATTGATGCTTTGGTGTCGCAAGAGAAGCTTTGGTTTCGTAAGAAACGCTTTC
906 ATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTC-T----AA--CATTG
* * ** * * * ** * *
144968 TTCCCACCAATTTTTGTAACGTATAAGTTCATGCCCCAAATAAGGATACAAGATCTTGATTAGGC
1 TT--GA-TAA--AAT-CAAAGT-T-TG-TC-T--CTTAAATAA-G--ACAA-A-CTTGAATAGTC
* * * * * **
145033 A-CCGCAA-ACATAGTCTTCTCATAAGGATTAGGCACCGCAAACATAGTCTTCTCATAAGGATAC
49 ATAC-TAATCCAT-TTCTTTTC-T--GGATTAGGCACCATAAACATAGTCTTCTCATAAGGATAC
* * * * * * * *
145096 ATGATCTTGATGCTTTGGTTCCACAAGATATGCTTTCTTCTCACCAATTTTTGTAAAGTATGAGT
109 ATGATATTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAATTTTTGAAAAGTATAAGT
* * * * * *
145161 TCATTGCTCAAATGAGACAAACATGGATTCTTGTAGGGATCTTCATTAATTTCCTAATTAGGCAC
174 TCATTCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCAC
* * * * * * * ** *
145226 TATAAACACATTCTCCTCATTACGATAAAAGATATTTATGATTTTCTATTGTATTGAAATCTTTT
239 TATAAACACATTCTCCCCAATAGGATAAATGATATTGATGGTTTTCTTTTGCCTGGAAATCTTTT
*
145291 CTTTGTCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATAAGACATGCATTGATTCTCGTAA
304 CTTTGTCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAA
*
145356 AAGTATCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATT
369 AAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATT
* * *
145421 GATGCTTTGGTGTCGCAAGATAAGCTGTTCTCCCTACCATTATTGATAGAATCAAAGTTTGTCTC
434 GATGCTTTGGTGTCGCAAGAGAAGCTGTTCTCCCCACCGTTATTGATAGAATCAAAGTTTGTCTC
145486 TTAAATAAGACAAACATGAATAGTCATACTAATCCACTTTCTTTTCTGGATTAGGCACCATAAAC
499 TTAAATAAGACAAACATGAATAGTCATACTAATCCACTTTCTTTTCTGGATTAGGCACCATAAAC
* * * * *
145551 ATTGTCTTCTTATAAGGACACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTTCTTCCCCC
564 ATAGTCTTCTTATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCAC
* * *
145616 CAATTTTTGAAAAGTAGAAGCTCATTCTTCAAATGAGACAAAGATAGATTCTAGTAAGGATCTTC
629 CAATTTTTGTAAAGTAGAAGTTCATTC-TCAAATGAGACAAACATAGATTCTAGTAAGGATCTTC
* *
145681 ATTCATTTCGTGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATTGATGGTTT
693 ATTCATTTCGTGATTAGGCACTATAAACACATTCTCCCCATTAGGATAAATGATATTGATGGTTT
* * *
145746 TCTTCTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGCTTGTACTATAAATGA
758 TCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGA
* * * * *
145811 GACAAGCATTGATTCTCGTAAAAGTCTCTATTCTTTCCATGATTAGGAACCAAAAACGCAATT-C
823 GACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAACAC-ATTCC
* *
145875 CTTCATTAGAATACATGACATTGATGCTTTGGTGTCGCAATAGAAGCTTTTCTTTCTAACATTG
887 CTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCTAACATTG
* * * * *
145939 TTGATAAAATCAAAGTTTGTCTCTTATACAAGACAAACTTGAGTAGTCATAGTAATCCATTTTTT
1 TTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACTTGAATAGTCATACTAATCCA-TTTCT
* * * **
146004 TTTCTGGACTAGGCGCCATAAACATAGTCTTCCCATAAGGATACATGATATCAATGCTTTGGTTT
65 TTTCTGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTT
* * * * *
146069 TGTAAGAAATGCTTTCTTCCCACCAATTTTTGAAAAGCATAAGTTCATTCCTCAAATTAGACAAA
130 CGCAAGAAACGCTTTCTTCCCACCAATTTTTGAAAAGTATAAGTTCATTCCTCAAATGAGACAAA
* * * *
146134 CAAGGATTCTAGTAAGGATTTTCAGTCATTTCGTGGTTAGGCACTATAAACACATTCTCCCCAAT
195 CATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCCCAAT
* * *
146199 AGGATCAATGATATTGATGGTTTTCTTTTGCCTGGAAATTTTTTCTTTGTGTTATTTTCCTTAAA
260 AGGATAAATGATATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGTCTTATTTTCCTTAAA
* * *
146264 ATCAAAGTTTGTACTTTAAATAAGACATGTATTGATTCTCGTAAAAGTCTCCATTCTTTTCAACA
325 ATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGA
* *
146329 TTGGGAGCCAAAAACACATTCCCTTCGTTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAG
390 TTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAG
*
146394 AAGCTGTTCTCCCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAAG
455 AAGCTGTTCTCCCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAAT
* *
146459 AGTCATACTAATCCATTTTCTTTTTTGGATTAGGCACCATAAACATAGTCTT-TTCATAAGGATA
520 AGTCATACTAATCCACTTTCTTTTCTGGATTAGGCACCATAAACATAGTCTTCTT-ATAAGGATA
* * * * *
146523 CATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTTTTTCCCACTAATTTTTG-AAACGTATAA
584 CATGATATTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAATTTTTGTAAA-GTAGAA
* * * *
146587 GTTCATTACCCAAATAAGACAAACATGGATTCTAGAAAGGATCTTCATTCATTTCGTTG-TTAGG
648 GTTCATT-CTCAAATGAGACAAACATAGATTCTAGTAAGGATCTTCATTCATTTCG-TGATTAGG
* *
146651 CACTATAAACACATTCTCCCCAATAGGATAAATGATATTGATGGTTTTCTTTTGCCTGAAAATCT
711 CACTATAAACACATTCTCCCCATTAGGATAAATGATATTGATGGTTTTCTTTTGCCTGGAAATCT
* * * * *
146716 TTTCTTTGCCTTATTTTCCTTAAAATCAAAGATAGCACTTTAAATGAGACAAGCATAGATTCTCG
776 TTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCG
* * *
146781 TAAAAGTCTCCACTCTTTCCAAGATTGGGAACCAACAACACATTCCCTTCATTAGAATACATGAC
841 TAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGAC
* * *
146846 ATTGATGCTTTGGTGTCACAAAAGAAGCTTTTCTTTCTAACGTTG
906 ATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCTAACATTG
* *
146891 TTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATAATAATCCACTTTCT
1 TTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACTTGAATAGTCATACTAATCCA-TTTCT
* * * * *
146956 TTTCTAGATT-GGCAGCATAAACATAGTCTTCTCATAAGGATACATGATCTTAATGCTTTGGTTC
65 TTTCTGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTT
* * * * * * *
147020 CACAAGATATGCTTTCTTCTCACCAATTTTTGTAAAGTATGAA-TTCGTTGCTCAAATGAGACAA
130 CGCAAGAAACGCTTTCTTCCCACCAATTTTTGAAAAGTAT-AAGTTCATTCCTCAAATGAGACAA
* * *
147084 ACATGGATTCTTGTAGGGATCTTCATTAATTTCGTTG-TTAGGCACTATAAACACATTCTCCCCA
194 ACATGGATTCTAGTAAGGATCTTCATTCATTTCG-TGATTAGGCACTATAAACACATTCTCCCCA
* *
147148 ATAGGATAAATGATATTGATGGTTTTCTTTTGCCTGAAAATCTTTTCTTTGCCTTATTTTCCTTA
258 ATAGGATAAATGATATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGTCTTATTTTCCTTA
* * * * * *
147213 AAATCAAAGATTGCACTTTAAATGAGACAAGCATAGATTCTCGTAAAAGTCTCCACTCTTTCCAA
323 AAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAA
* * *
147278 GATTGGGAACCAACAACACATTCCCTTCATTAGAATACATGACATTGATGCTTTGGTGTCACAAG
388 GATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAG
* * * * * *
147343 AGAAGCT-TT-TCCTTCTAACGTTGTTGATAAAATCAAAGTTTGTCTCTTAAATAAGGCAAACTT
453 AGAAGCTGTTCTCC--CCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAT
* * * * ** *
147406 GAATACTCATACTAATCCCCATTCTTTTCAGGATTAACCACCATAAACATAGTCTTTTTATAAGG
516 GAATAGTCATACTAATCCACTTTCTTTTCTGGATTAGGCACCATAAACATAGTCTTCTTATAAGG
* * * * **
147471 ATACATGATATTGATGCTTTGGTTTTGCAAGAAACACTTTCTTCCCACCAATTTTAGTAAATTCT
581 ATACATGATATTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAATTTTTGTAAAGTAG
*** * * * * *
147536 AAGTTCGCCCCTCAAATGAGACAAACATGGATTCTAGTAGGGGTCATCATTCATTTTGTGATTAG
646 AAGTTC-ATTCTCAAATGAGACAAACATAGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAG
* * * *
147601 GCACTATAAACACATTCTCCTCC-TTAGGATAAACGATATTGATGGTTTTCTTTTTCATGAAAAT
710 GCACTATAAACACATTCTCC-CCATTAGGATAAATGATATTGATGGTTTTCTTTTGCCTGGAAAT
* * * * * *
147665 ATTTTCTTTGCATTA-TTTCCATAAAATCAAAGTTTGTACTTTAAATGAAACAAGCATTGATTCG
774 CTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCT
* *
147729 CGTAAAAGTCTCCATTTTTTCCAAGATTGGAAACCAAAAACACATTCCCTTCATTAGGATACATG
839 CGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATG
*
147794 ACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCTTAA-GTTG
904 ACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTC-TAACATTG
* * * *
147841 TTGATAAAATC-AAGTTTCTCTCTTAAATAAGGCAAACTTGAGTACTCATACTAATCCCCA-TTC
1 TTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACTTGAATAGTCATACTAAT--CCATTTC
** * * * * * *
147904 TTTTCAAGATTAGCCACCATAAACATAGTCTTCTGATACGGATACAAGA-ATTTTATGATTTGGT
64 TTTTCTGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATA-TTGATGCTTTGGT
* * * * * * * * * * * *
147968 TTCACTAGGAACGCTTTTTTCCCA-CAATTTTTGTAGATTCTATGTTCGTGCCTCAAATGAGATA
128 TTCGCAAGAAACGCTTTCTTCCCACCAATTTTTGAAAAGTATAAGTTCATTCCTCAAATGAGACA
* * * *
148032 AACATGGATTCTAGTAAGAATCATCATTCATTTCGTGATTAGGCACCATAAACACATTCTTCTCC
193 AACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTC-TCCCC
** * * *
148097 --TCAGGATGCATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTTTTTG-CTTCACTTTCC
257 AAT-AGGATAAATGATATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGTCTT-ATTTTCC
*
148159 TTAAAATCAAAGTTTGTACTTTAAATGAGAGATGCATTGATTCTCGTAAAAGTCTCCATTC-TTT
320 TTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTT
* ** * *
148223 CTAACATTGGGAAAAAAAAAGACATTCCCTTTATTA-G------G--A-T-A-------------
385 C-AAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCG
*
148264 C-----AA---G--------A-C---ATTGATAGAATCAAAGTTTATCTCTTAAATAAGACAAAC
449 CAAGAGAAGCTGTTCTCCCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAAC
* * * * * *
148309 ATGAATACTCATACTAATCCACATTCTTTTCTGGATTAGGCACCGTAAACAAATTCTTCTAATAA
514 ATGAATAGTCATACTAATCCACTTTCTTTTCTGGATTAGGCACCATAAACATAGTCTTCTTATAA
* * * * *
148374 GGATATATGATATTGATGCTTTGGTTTCGCAAGAAACACTTTCATCCCACCAATTTTTTGTTAAT
579 GGATACATGATATTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAA-TTTTTGTAAAG
* * * * * * * *
148439 TCA-AATTTCGTGCCCCAAATGAGATAAGCA-AGGATTCTAGTAAGCATCTTCATTCATTTCATG
643 T-AGAAGTTCAT-TCTCAAATGAGACAAACATA-GATTCTAGTAAGGATCTTCATTCATTTCGTG
* * * *
148502 ATTAGGCACTATAAACACATTCTCCTCATTCA-GATAAACGATATTAATGGTTTT-TTTTGCGTG
705 ATTAGGCACTATAAACACATTCTCCCCATT-AGGATAAATGATATTGATGGTTTTCTTTTGCCTG
* * *
148565 GAATTCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAAAGAGACATGCGTTG
769 GAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTG
* ** * * * * *
148630 ATTTTCACAAAAGTCTCCATTCTTTTCAAGATTGGGAACTAAAACCACATTCCTTTCAATAGGAT
834 ATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGAT
* * *
148695 ACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTG
899 ACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCTAACATTG
* * * *
148747 TTGATAGAATCAAAG-TTGTCTGTTAAATAAGACAAACGTGAATACTCATACTAATCCCCA-TTC
1 TTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACTTGAATAGTCATACTAAT--CCATTTC
* * * *
148810 CTTTCAGGATTAGGCACCATAAACATAGTCTTTTCATAAGGATACATGATCTTGATGCTTTGGTT
64 TTTTCTGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTT
* * * * * * * * *
148875 TCACAGGATACGCTTTCTTCTCACCAATTTTTGTAAAGTATGAGTTTACTACTCAAATGAGACAA
129 TCGCAAGAAACGCTTTCTTCCCACCAATTTTTGAAAAGTATAAGTTCATTCCTCAAATGAGACAA
* * * ** **
148940 ACATGGATTCTTGTAGGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTTTCTTCTT
194 ACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCCCAA
* *
149005 TAGGATAAATGATATTTATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGTCATATTTTCCTTAA
259 TAGGATAAATGATATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGTCTTATTTTCCTTAA
* *
149070 AATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTTTTTTCAAC
324 AATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAG
* * * *
149135 ATTGGGAACCAAAAACGCATTCCCTTCATTGGGATACGTTACATTGATGAC-TTGGTGTCGCAAG
389 ATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATG-CTTTGGTGTCGCAAG
* * * * * * * * *
149199 AGATGCTTTTCTTCCCAACGTTATCGATAAAATCAAAATTTGCCTCTTAAAAAAGACAAAGC-TG
453 AGAAGCTGTTCTCCCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAA-CATG
* * * *
149263 AAAACTCATACTAATCC-CATTCTTTT-TAGGATTAGGCACCATTAACATAGTCTTCTTATATA-
517 AATAGTCATACTAATCCACTTTCTTTTCT-GGATTAGGCACCATAAACATAGTCTTCTTATA-AG
** ** * * * * *
149325 GATACGGGATATTGATGAATTGGTTTCACAAGAAAAGCTTGT-TTCTCA-TAATTTTTGTAAATT
580 GATACATGATATTGATGCTTTGGTTTCGCAAGAAACGCTT-TCTTCCCACCAATTTTTGTAAAGT
** * * * * *
149388 CTATGTTCGTGCCTCAAATGAGACAAACA-CGAATTCTAGTAAGGATCTTCATTCACTTCGTGAT
644 AGAAGTTCAT-TCTCAAATGAGACAAACATAG-ATTCTAGTAAGGATCTTCATTCATTTCGTGAT
* * * * *
149452 TAGGCATTATAAACACATACTCCTCATTAGGATAAATGATATTGATGGTTTTTTTTTTTTGCATG
707 TAGGCACTATAAACACATTCTCCCCATTAGGATAAATGATATTGATGG---TTTTCTTTTGCCTG
* * * *
149517 GAAATCTTTTCTTTGACTTGTTTCCCTTAAAATCAAAGTTTGCACTTTAAATGAGACATGCATTG
769 GAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTG
* *
149582 ATTCCCGTAAAAGACTCCATTCCTTT-CAAGATTGGGAACCAAAA
834 ATTCTCGTAAAAGTCTCCATT-CTTTCCAAGATTGGGAACCAAAA
149626 GATGTTCTCC
Statistics
Matches: 8129, Mismatches: 1102, Indels: 428
0.84 0.11 0.04
Matches are distributed among these distances:
905 165 0.02
906 372 0.05
907 223 0.03
908 9 0.00
909 1 0.00
916 1 0.00
917 1 0.00
918 1 0.00
920 2 0.00
925 1 0.00
931 1 0.00
936 1 0.00
938 1 0.00
939 1 0.00
940 1 0.00
942 1 0.00
947 3 0.00
948 120 0.01
949 465 0.06
950 921 0.11
951 3046 0.37
952 1041 0.13
953 12 0.00
954 31 0.00
955 12 0.00
956 11 0.00
957 2 0.00
958 15 0.00
959 21 0.00
960 3 0.00
961 3 0.00
962 2 0.00
963 3 0.00
964 5 0.00
965 5 0.00
966 3 0.00
967 2 0.00
968 5 0.00
969 3 0.00
970 28 0.00
971 14 0.00
972 2 0.00
973 13 0.00
974 18 0.00
975 21 0.00
976 4 0.00
977 842 0.10
978 667 0.08
979 4 0.00
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.36
Consensus pattern (950 bp):
TTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACTTGAATAGTCATACTAATCCATTTCTT
TTCTGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTC
GCAAGAAACGCTTTCTTCCCACCAATTTTTGAAAAGTATAAGTTCATTCCTCAAATGAGACAAAC
ATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCCCAATA
GGATAAATGATATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGTCTTATTTTCCTTAAAA
TCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGAT
TGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGA
AGCTGTTCTCCCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATA
GTCATACTAATCCACTTTCTTTTCTGGATTAGGCACCATAAACATAGTCTTCTTATAAGGATACA
TGATATTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAATTTTTGTAAAGTAGAAGTT
CATTCTCAAATGAGACAAACATAGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTA
TAAACACATTCTCCCCATTAGGATAAATGATATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCT
TTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAA
GTCTCCATTCTTTCCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGA
TGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCTAACATTG
Found at i:142663 original size:33 final size:33
Alignment explanation
Indices: 142621--142689 Score: 138
Period size: 33 Copynumber: 2.1 Consensus size: 33
142611 ACAAGATCTT
142621 GATTAGGCACCGCAAACATAGTCTTCTCATAAG
1 GATTAGGCACCGCAAACATAGTCTTCTCATAAG
142654 GATTAGGCACCGCAAACATAGTCTTCTCATAAG
1 GATTAGGCACCGCAAACATAGTCTTCTCATAAG
142687 GAT
1 GAT
142690 ACATGATCTT
Statistics
Matches: 36, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
33 36 1.00
ACGTcount: A:0.33, C:0.23, G:0.19, T:0.25
Consensus pattern (33 bp):
GATTAGGCACCGCAAACATAGTCTTCTCATAAG
Found at i:145067 original size:33 final size:33
Alignment explanation
Indices: 145025--145093 Score: 138
Period size: 33 Copynumber: 2.1 Consensus size: 33
145015 ACAAGATCTT
145025 GATTAGGCACCGCAAACATAGTCTTCTCATAAG
1 GATTAGGCACCGCAAACATAGTCTTCTCATAAG
145058 GATTAGGCACCGCAAACATAGTCTTCTCATAAG
1 GATTAGGCACCGCAAACATAGTCTTCTCATAAG
145091 GAT
1 GAT
145094 ACATGATCTT
Statistics
Matches: 36, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
33 36 1.00
ACGTcount: A:0.33, C:0.23, G:0.19, T:0.25
Consensus pattern (33 bp):
GATTAGGCACCGCAAACATAGTCTTCTCATAAG
Found at i:147928 original size:158 final size:158
Alignment explanation
Indices: 147292--147928 Score: 376
Period size: 158 Copynumber: 4.0 Consensus size: 158
147282 GGGAACCAAC
* * *
147292 AACACATTCCCTTCATTAGAATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCCTT
1 AACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTT
* * *
147357 C-TAACGTTGTTGATAAAATCAAAGTTTGTCTCTTAAATAAGGCAAACTTGAATACTCATACTAA
66 CTTAA-GTT-TTGATAAAATCAAAGTTTCTCTCTTAAATAAGACAAACTTGAGTACTCATACTAA
* *
147421 TCCCCATTCTTTTCAGGATTAACCACCATA
129 TCCCCATTCTTTTCAAGATTAGCCACCATA
* * ** * * * * * *
147451 AACATAGTCTTTTTATAAGGATACATGATATTGATGCTTTGGTTTTGCAAGA-AA-CACTTTC-T
1 AACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGC-TTTTCTT
** * * * * * * * * * *
147513 TCCCACCAATTTT-AGTAAATTCTAAG-TTCGCCCCTCAAATGAGACAAACATG-G-ATTC-TAG
65 TCTTA--AGTTTTGA-TAAAATCAAAGTTTC-TCTCTTAAATAAGACAAACTTGAGTACTCATAC
* ** ** * *
147573 TAGGGGTCATCATTCATTTT-GTGATTAGGCACTATA
126 TA---ATCCCCATTC-TTTTCAAGATTAGCCACCATA
* * * * * ** * ** * * **
147609 AACACATTCTCC-TCCTTAGGATAAACGATATTGATGGTTTTCTTTTTCATGAAAATATTTTCTT
1 AACACATTC-CCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTT
** * * * * *
147673 TGCATT-A-TTTCCATAAAATCAAAGTTTGTACT-TTAAATGAA-ACAAGCATTGA-TTCGCGTA
65 T-C-TTAAGTTTTGATAAAATCAAAGTTTCT-CTCTTAAAT-AAGACAAAC-TTGAGTACTCATA
* * * ** *
147733 -AAAGTCTCCATT-TTTTCCAAGATTGGAAACCAAA
125 CTAA-TCCCCATTCTTTT-CAAGATTAGCCACCATA
147767 AACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTT
1 AACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTT
*
147832 CTTAAGTTGTTGATAAAATC-AAGTTTCTCTCTTAAATAAGGCAAACTTGAGTACTCATACTAAT
66 CTTAAGTT-TTGATAAAATCAAAGTTTCTCTCTTAAATAAGACAAACTTGAGTACTCATACTAAT
147896 CCCCATTCTTTTCAAGATTAGCCACCATA
130 CCCCATTCTTTTCAAGATTAGCCACCATA
147925 AACA
1 AACA
147929 TAGTCTTCTG
Statistics
Matches: 338, Mismatches: 104, Indels: 73
0.66 0.20 0.14
Matches are distributed among these distances:
155 4 0.01
156 9 0.03
157 19 0.06
158 222 0.66
159 76 0.22
160 5 0.01
161 3 0.01
ACGTcount: A:0.32, C:0.19, G:0.14, T:0.35
Consensus pattern (158 bp):
AACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTT
CTTAAGTTTTGATAAAATCAAAGTTTCTCTCTTAAATAAGACAAACTTGAGTACTCATACTAATC
CCCATTCTTTTCAAGATTAGCCACCATA
Found at i:149192 original size:475 final size:470
Alignment explanation
Indices: 148270--149625 Score: 1641
Period size: 475 Copynumber: 2.8 Consensus size: 470
148260 GATACAAGAC
* * *
148270 ATTGATAGAATCAAAGTTTATCTCTTAAATAAGACAAACATGAATACTCATACTAATCCACATTC
1 ATTGATAGAATCAAAG-TTGTCTCTTAAATAAGACAAACGTGAATACTCATACTAATCCCCATTC
* * * * * *
148335 TTTTCTGGATTAGGCACCGTAAACAAATTCTTCTAATAAGGATATATGATATTGATGCTTTGGTT
65 TTTTCAGGATTAGGCACCATAAACATAGTCTT-TTATAAGGATACATGATATTGATGCTTTGGTT
* * * * * * *
148400 TCGCAAGAAACACTTTCATCCCACCAATTTTTTGTTAATTCAAATTTCGTGCCCCAAATGAGATA
129 TCACAAGAAACGCTTTCTTCTCACCAA-TTTTTGTAAATT---ATTTCGTGCCTCAAATGAGACA
* * *
148465 AGCAAGGATTCTAGTAAGCATCTTCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCA
190 AACAAGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTC-
* * * * *
148530 TTCA-GATAAACGATATTAATGGTTTTTTTTGCGTGGAATTCTTTTCTTTGCCTTATTTTCCTTA
254 TTTAGGATAAATGATATTAATGGTTTTTTTTGCATGGAAATCTTTTCTTTGACTTATTTTCCTTA
* * * **
148594 AAATCAAAGTTTGTACTTTAAAAGAGACATGCGTTGATTTTCACAAAAGTCTCCATTCTTTTCAA
319 AAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAA
* * *
148659 GATTGGGAACTAAAACCACATTCCTTTCAATAGGATACATGACATTGATGCTTTGGTGTCGCAAG
384 GATTGGGAACCAAAAACACATTCCCTTCAATAGGATACATGACATTGATGCTTTGGTGTCGCAAG
* *
148724 AGAAGCTTTTCTTTCCACCGTT
449 AGAAGCTTTTCTTCCCAACGTT
* * *
148746 GTTGATAGAATCAAAGTTGTCTGTTAAATAAGACAAACGTGAATACTCATACTAATCCCCATTCC
1 ATTGATAGAATCAAAGTTGTCTCTTAAATAAGACAAACGTGAATACTCATACTAATCCCCATTCT
*
148811 TTTCAGGATTAGGCACCATAAACATAGTCTTTTCATAAGGATACATGATCTTGATGCTTTGGTTT
66 TTTCAGGATTAGGCACCATAAACATAGTCTTTT-ATAAGGATACATGATATTGATGCTTTGGTTT
* * *
148876 CACAGGATACGCTTTCTTCTCACCAATTTTTGTAAAGTATGAGTTTAC-T-ACTCAAATGAGACA
130 CACAAGAAACGCTTTCTTCTCACCAATTTTTGTAAA-T-T-A-TTT-CGTGCCTCAAATGAGACA
* * * * *
148939 AACATGGATTCTTGTAGGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTTTCTTCT
190 AACAAGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCT
* * * *
149004 TTAGGATAAATGATATTTATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGTCATATTTTCCTTA
255 TTAGGATAAATGATATTAATGGTTTT-TTTTGCATGGAAATCTTTTCTTTGACTTATTTTCCTTA
*
149069 AAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTTTTTTCAA
319 AAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAA
* * * * * *
149134 CATTGGGAACCAAAAACGCATTCCCTTCATTGGGATACGTTACATTGATGAC-TTGGTGTCGCAA
384 GATTGGGAACCAAAAACACATTCCCTTCAATAGGATACATGACATTGATG-CTTTGGTGTCGCAA
*
149198 GAGATGCTTTTCTTCCCAACGTT
448 GAGAAGCTTTTCTTCCCAACGTT
* * * * * *
149221 ATCGATAAAATCAAAATTTGCCTCTTAAAAAAGACAAA-GCTGAAAACTCATACTAAT-CCCATT
1 ATTGATAGAATC-AAAGTTGTCTCTTAAATAAGACAAACG-TGAATACTCATACTAATCCCCATT
* * ** **
149284 CTTTTTAGGATTAGGCACCATTAACATAGTCTTCTTATATA-GATACGGGATATTGATGAATTGG
64 CTTTTCAGGATTAGGCACCATAAACATAGTCTT-TTATA-AGGATACATGATATTGATGCTTTGG
* *
149348 TTTCACAAGAAAAGCTTGT-TTCTCA-TAATTTTTGTAAATTCTATGTTCGTGCCTCAAATGAGA
127 TTTCACAAGAAACGCTT-TCTTCTCACCAATTTTTGTAAA-T-TAT-TTCGTGCCTCAAATGAGA
* * * * *
149411 CAAACACGAATTCTAGTAAGGATCTTCATTCACTTCGTGATTAGGCATTATAAACACATACTCCT
188 CAAACAAGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCT
* * * *
149476 CATTAGGATAAATGATATTGATGGTTTTTTTTTTTTGCATGGAAATCTTTTCTTTGACTTGTTTC
253 CTTTAGGATAAATGATATTAATGG----TTTTTTTTGCATGGAAATCTTTTCTTTGACTTATTTT
* * * *
149541 CCTTAAAATCAAAGTTTGCACTTTAAATGAGACATGCATTGATTCCCGTAAAAGACTCCATTCCT
314 CCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTT
149606 TTCAAGATTGGGAACCAAAA
379 TTCAAGATTGGGAACCAAAA
149626 GATGTTCTCC
Statistics
Matches: 758, Mismatches: 102, Indels: 39
0.84 0.11 0.04
Matches are distributed among these distances:
472 2 0.00
473 7 0.01
474 201 0.27
475 378 0.50
476 59 0.08
477 107 0.14
478 4 0.01
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.36
Consensus pattern (470 bp):
ATTGATAGAATCAAAGTTGTCTCTTAAATAAGACAAACGTGAATACTCATACTAATCCCCATTCT
TTTCAGGATTAGGCACCATAAACATAGTCTTTTATAAGGATACATGATATTGATGCTTTGGTTTC
ACAAGAAACGCTTTCTTCTCACCAATTTTTGTAAATTATTTCGTGCCTCAAATGAGACAAACAAG
GATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGA
TAAATGATATTAATGGTTTTTTTTGCATGGAAATCTTTTCTTTGACTTATTTTCCTTAAAATCAA
AGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGG
AACCAAAAACACATTCCCTTCAATAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCT
TTTCTTCCCAACGTT
Found at i:150519 original size:475 final size:476
Alignment explanation
Indices: 149628--151471 Score: 2444
Period size: 475 Copynumber: 3.9 Consensus size: 476
149618 AACCAAAAGA
* ** * *
149628 TGTTCTCCCCACCGTTTTTGATAGAATTGAAGTTTGTCTCTTAAATGAGACAAACATGAATAATC
1 TGTTCTCCCCACCGTTGTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTC
*
149693 ATACTAATCCACTTTCTTTTCT-AGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATG
66 ATACTAATCCGCTTTCTTTTCTGA-ATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATG
* * * *
149757 TTGTCGATGCTTTGGTTTCGTAAGAAACGCTTTCTTCCCACCAATTTTTGATAAGCATAAGTTCA
130 ATATCGATGCTTTGGTTTCGTAAGAAACACTTTCTTCCCACCAATTTTTGAAAAGCATAAGTTCA
* * * * *
149822 TTCCTCAAATTAGACGAACAAGGATTCTGGTAAGGATCTTCATTCTTTTCGTGGTTAGGCATTAT
195 TTCCTCAAATGAGACAAACAAGGATTCTAGTAAGGATCTTCATTCATTTCGTGGTTAGGCACTAT
* * * * *
149887 AAACACAATCTCCCTAATAGGATAAATGTTATTGATGGTTTTCTTTTGCCTGGAAATTTTTTCTT
260 AAACACATTCTCCCCAATAGGATAAATGATATTGATGGTTTTCTTTTGCCTGAAAATCTTTTCTT
* * * * * *
149952 TGTCTTATTTTTCTTAAAATCAAAGTTTGCACTTTAAAAAAGACATGCATTGATTTTCGTAAAAG
325 TGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATAAGACATGCATTAATTCTCGTAAAAG
150017 TCTCCATTCTTTTCAACATTGGGAGCCAAAAACACATTCCCTTTATTAGGATACATGACATTGAT
390 TCTCCATTCTTTTCAACATTGGGAGCCAAAAACACATTCCCTTTATTAGGATACATGACATTGAT
150082 GCTTTGGTGTCGCAAGAGAAGC
455 GCTTTGGTGTCGCAAGAGAAGC
** * *
150104 TGTTCTCCCCACCGTCATTGATTGAATCAAAGTTTGTCTCTTAAATAAGATAAACATGAATAGTC
1 TGTTCTCCCCACCGTTGTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTC
*
150169 ATACTAATCCGCTTTCTTTTCT-AATTAGGCACCATAGACATAGTCTTCTCATAAGGATACATGA
66 ATACTAATCCGCTTTCTTTTCTGAATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGA
* *
150233 TATCGATGCTTTGGTTTCGTAAGAAATACTTTTTTCCCACCAATTTTTGAAAAGCATAAGTTCAT
131 TATCGATGCTTTGGTTTCGTAAGAAACACTTTCTTCCCACCAATTTTTGAAAAGCATAAGTTCAT
* * *
150298 TCCTCAAATTAGACAAACAACGATTCTAGTAAGGATCTTCATTCATTTCGTGGTTAGGCATTATA
196 TCCTCAAATGAGACAAACAAGGATTCTAGTAAGGATCTTCATTCATTTCGTGGTTAGGCACTATA
* * * * * ** *
150363 AACACATTCTCCCCAATAGGATAAATGATATTGACGGTTTTCTTTTGCTTGGAATTTTTTTAATC
261 AACACATTCTCCCCAATAGGATAAATGATATTGATGGTTTTCTTTTGCCTGAAAATCTTTTCTTT
* *
150428 GTCTTATTTTTCTTAAAATCAAAGTTTGTACTTTAAATAAGACATGCATTAATTCTCGTAAAAGT
326 GCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATAAGACATGCATTAATTCTCGTAAAAGT
* ***
150493 CTCCATTCTTTTTAACATTGGGAGCCAAAAACACATTCCCTGCCTTAGGATACATGACATTGATG
391 CTCCATTCTTTTCAACATTGGGAGCCAAAAACACATTCCCTTTATTAGGATACATGACATTGATG
** * *
150558 CTTTGGCATCACTAGAGAAGC
456 CTTTGGTGTCGCAAGAGAAGC
*
150579 TGTTCTCCCCACCGTTGTTGATAGAATCAAAGTTTGTCTCTGAAATAAGACAAACATGAATAGTC
1 TGTTCTCCCCACCGTTGTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTC
* * *
150644 ATAGTAATCCGCTTTTTTTTCTGGATTAGGCACCATAAAC--AGTCTTCTCATAAGGATACATGA
66 ATACTAATCCGCTTTCTTTTCTGAATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGA
* ** * * * * *
150707 TATCTATGCTTCAGCTTCGTAAGAAACGCTTTCTTCCCGCCAATTTTTGAAAAGTATAAGTTCGT
131 TATCGATGCTTTGGTTTCGTAAGAAACACTTTCTTCCCACCAATTTTTGAAAAGCATAAGTTCAT
* *
150772 TCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGGTTAGGAACTATA
196 TCCTCAAATGAGACAAACAAGGATTCTAGTAAGGATCTTCATTCATTTCGTGGTTAGGCACTATA
*
150837 AACACATTCTCCCCAATAGGATAAATGATATTGATGGTTTTCTTTTACCTGAAAATCTTTTCTTT
261 AACACATTCTCCCCAATAGGATAAATGATATTGATGGTTTTCTTTTGCCTGAAAATCTTTTCTTT
* * * **
150902 GCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAACC
326 GCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATAAGACATGCATTAATTCTCGTAAAAGT
* * * * * *
150967 CTCCATTCTTTCCAAGATTGGGAACCAAAAACACATTCCCTTTATTAGGACACATGACATTAATA
391 CTCCATTCTTTTCAACATTGGGAGCCAAAAACACATTCCCTTTATTAGGATACATGACATTGATG
* *
151032 CTTCGATGTCGCAAGAGAAGC
456 CTTTGGTGTCGCAAGAGAAGC
* ** * * * * ** * *
151053 TTTTCTTTCTAACGTTGTTGATAAAATCAAAGTTTATCTCTTAAATAAGGTAAACTTGAATACTC
1 TGTTCTCCCCACCGTTGTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTC
* * * ** *
151118 ATACTAATCC-ATATTCTTTTTTGGATTAACCACCATAAACATAGTCTTTTCATAAGGATACATG
66 ATACTAATCCGCT-TTCTTTTCTGAATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATG
* * **
151182 ATATTGATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTGTAAATTC-TAAGTTC
130 ATATCGATGCTTTGGTTTCGTAAGAAACACTTTCTTCCCACCAATTTTTG-AAAAGCATAAGTTC
* * * * * * * * *
151246 GTGCC-CTAAATGAGGCAACCATGGATTCTAGTAGGGGTCTTCCTTCATTTCGTGATTAGGCACT
194 ATTCCTC-AAATGAGACAAACAAGGATTCTAGTAAGGATCTTCATTCATTTCGTGGTTAGGCACT
* * * * * *
151310 ACAACCACATTCTCCTCATTAGGATAAATGATATTGATGTTTTTCTTTTGCATGAAAATCTTTTC
258 ATAAACACATTCTCCCCAATAGGATAAATGATATTGATGGTTTTCTTTTGCCTGAAAATCTTTTC
* * * * *
151375 TTTGCCTTA-TTTCCATAAAATCGAAGTTTGTACTTTAAATGAGACCTGCATTAATTCCCGTAAA
323 TTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATAAGACATGCATTAATTCTCGTAAA
* * * * *
151439 AGACTCCATTCCTTCCAAGATTGGGAACCAAAA
388 AGTCTCCATTCTTTTCAACATTGGGAGCCAAAA
151472 GCTGTTCTCC
Statistics
Matches: 1211, Mismatches: 151, Indels: 13
0.88 0.11 0.01
Matches are distributed among these distances:
473 1 0.00
474 407 0.34
475 515 0.43
476 285 0.24
477 3 0.00
ACGTcount: A:0.30, C:0.19, G:0.15, T:0.36
Consensus pattern (476 bp):
TGTTCTCCCCACCGTTGTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTC
ATACTAATCCGCTTTCTTTTCTGAATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGA
TATCGATGCTTTGGTTTCGTAAGAAACACTTTCTTCCCACCAATTTTTGAAAAGCATAAGTTCAT
TCCTCAAATGAGACAAACAAGGATTCTAGTAAGGATCTTCATTCATTTCGTGGTTAGGCACTATA
AACACATTCTCCCCAATAGGATAAATGATATTGATGGTTTTCTTTTGCCTGAAAATCTTTTCTTT
GCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATAAGACATGCATTAATTCTCGTAAAAGT
CTCCATTCTTTTCAACATTGGGAGCCAAAAACACATTCCCTTTATTAGGATACATGACATTGATG
CTTTGGTGTCGCAAGAGAAGC
Found at i:153346 original size:158 final size:158
Alignment explanation
Indices: 152686--155262 Score: 527
Period size: 158 Copynumber: 16.3 Consensus size: 158
152676 TAGGCACTAC
* * * *
152686 AAACACATTCTCCTT-ATTAGGATAAATGATATTGATGTTTTTCTTTTGCATGGAAATCTTTTCT
1 AAACACATTCT-CTTCTTTAGGATACATGATATTGATGATTTGCTTTTGC-TGGAAATC-TTTCT
* * ** * *
152750 TTGCCTCAGTTTCCT-TAAAATCAAAGTTTGCACTTTAAATGTTATAAGCATTGATTCTCGTAAA
63 TTGCCTCAATTTCCTGTAAAATCAAAGTTTGTACTTTAAATGAGACAAACATTGATTCTCGTAAA
* * *
152814 GGTCCCTATTCTTTCCAAGATTGGGAACCAA
128 AGTCCCTATTATTTCCAAGATTAGGAACCAA
* * * * * * *
152845 AAACACATTCTCTTCTTTAGGATACATGACATTGATGCTTTGGTGTCGCTAGAGAAGCTTTCTTT
1 AAACACATTCTCTTCTTTAGGATACATGATATTGATGATTTGCTTTTGCTGGA-AATCTTTCTTT
* * * * *
152910 --CT-AACGTTGCTGATAAAATCAAAGTTTGT-CTCTTAAA-GAAGGCAAAC-TTGAATACTCAT
65 GCCTCAA-TTTCCTG-TAAAATCAAAGTTTGTACT-TTAAATG-AGACAAACATTG-ATTCTCGT
* * * ** * ** *
152969 ACTAA-TCCCCATTTTTTTTAGGATTAGCCACCAT
125 A-AAAGTCCCTATTATTTCCAAGATTAGGAACCAA
* * * * * *
153003 AAATATAGTCT-TT-TGATACGGATACAGGATATTGATGATTTGCTTTTTCTAGGAACA-CTTT-
1 AAACACATTCTCTTCT-TTA-GGATACATGATATTGATGATTTGCTTTTGCT-GGAA-ATCTTTC
* * * * * * * * * * * * *
153064 TTTTCCACAATTT-TTGTAGATTCTATGTTCGTGCCTTAAATAAGACAAACATGGATTCTAGTAA
62 TTTGCCTCAATTTCCTGTAAAATCAAAGTTTGTACTTTAAATGAGACAAACATTGATTCTCGTAA
* ** * * *
153128 GGATAAT--C-ATTCATTT-CGTGATTAGGCACTAT
127 --A-AGTCCCTATT-ATTTCCAAGATTAGGAACCAA
* * * *
153160 AAACACATTCT-TCTCCTCAGGATGCATGATATTGATGGTTT-CTTTTGCATGGAAATCTTCTCT
1 AAACACATTCTCT-TCTTTAGGATACATGATATTGATGATTTGCTTTTGC-TGGAAATCTT-TCT
* * *
153223 TTGCCTCAATTTCCT-TAAAATCAAAGTTTGTACTTTAAATGTGATAAGCATTGATTCTCGTAAA
63 TTGCCTCAATTTCCTGTAAAATCAAAGTTTGTACTTTAAATGAGACAAACATTGATTCTCGTAAA
153287 AGTCCCTATTATTTCCAAGATT-GTGAACCAA
128 AGTCCCTATTATTTCCAAGATTAG-GAACCAA
* * * * * * ** *
153318 AAACACATTCTCTTCTTTAGGATACATGACATTGATGCTTCGGTGTCGCAAGAGAAGCTTTCTTT
1 AAACACATTCTCTTCTTTAGGATACATGATATTGATGATTTGCTTTTGCTGGA-AATCTTTCTTT
** * * ** * *
153383 --CT-AATGTTGTTGATAAAATCAAAGTTTAT-CTCTTAAATAAGGTAAAC-TTGAATACTCATA
65 GCCTCAAT-TTCCTG-TAAAATCAAAGTTTGTACT-TTAAATGAGACAAACATTG-ATTCTCGTA
* * * * ** * *
153443 CTAA-TCCAC-ATTCTTTTCAGGATTAACAACTAT
126 -AAAGTCC-CTATTATTTCCAAGATTAGGAACCAA
* * * * * * * ** * *
153476 AAACATAGTCTTTTCATAAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAACACATTC-TT
1 AAACACATTCTCTTCTTTAGGATACATGATATTGATGATTTGCTTTTGCTGGAAA-TCTTTCTTT
* * * * * * *** * * * ***
153540 CCCACCAATTT-TTGTAAATTCTAAGTTTGTGCCCCAAATGAGACACACATGGATTCTAGTAGGG
65 GCC-TCAATTTCCTGTAAAATCAAAGTTTGTACTTTAAATGAGACAAACATTGATTCTCGTAAAA
* * * * *
153604 GT-CTTCATTCATTT-CATGATTAGGCACTAT
129 GTCCCT-ATT-ATTTCCAAGATTAGGAACCAA
* * * * *
153634 AAACACATTCTCCTCATTT-GGATAAATGATATTGATGTTTTTCTTTTGCATGAAAATCTTTTCT
1 AAACACATTCTCTTC-TTTAGGATACATGATATTGATGATTTGCTTTTGC-TGGAAATC-TTTCT
* * * * * *
153698 TTGCCT-TATTTCCT-TAAAATCGATGTTTGTACTTTACATGAGACAAGCATTGACTT-GCGTAA
63 TTGCCTCAATTTCCTGTAAAATCAAAGTTTGTACTTTAAATGAGACAAACATTGA-TTCTCGTAA
* *
153760 AAGTGTCC-ATTTTTTCCAAGATTAGGAACCAA
127 AAGT-CCCTATTATTTCCAAGATTAGGAACCAA
* * * * * * * * ** *
153792 AAACACATTCCCTTCATTAGGATACATTACATTGATGTTTTGGTGTCGCAAGAGAAGCTTTTCTT
1 AAACACATTCTCTTCTTTAGGATACATGATATTGATGATTTGCTTTTGCTGGA-AATC-TTTCTT
* ** * * * * *
153857 T--CT-AACGTTGTTGATAAAATC-AAGTTTGT-CTCTTAAATAAGGCAAAC-CTGAATACTCAT
64 TGCCTCAA-TTTCCTG-TAAAATCAAAGTTTGTACT-TTAAATGAGACAAACATTG-ATTCTCGT
* * * * * **
153916 ACTAA-TCCCCATTCTTTTCAGGATTAGCCACC-A
125 A-AAAGTCCCTATTATTTCCAAGATTAGGAACCAA
* ** * * * * ** **
153949 TAA-ACATAGTCTTCTGATATGGATACAGGATATTGACGATTTGGTTTCACTAGGAACGCTTT-T
1 AAACACATTCTCTTCT-TTA-GGATACATGATATTGATGATTTGCTTTTGCT-GGAAATCTTTCT
* * * * ** * * * * * ** * * *
154012 TT-CCTATAATTT-TTGTAGATTTTATGTTCGTGCCTCAAAAAAGACAAACATGGATTCTAGT-G
63 TTGCCT-CAATTTCCTGTAAAATCAAAGTTTGTACTTTAAATGAGACAAACATTGATTCTCGTAA
* * ** * * *
154074 AGGAT-CATCATTCATTT-CGTGATTAGGCACTAT
127 AAG-TCCCT-ATT-ATTTCCAAGATTAGGAACCAA
* * * * * * *
154107 AAACACATTCT-TCACCTCAAGATGCATGATATTGATGGTCTT-CTTTTGCATGGAAATATTTTC
1 AAACACATTCTCT-TCTTTAGGATACATGATATTGATGAT-TTGCTTTTGC-TGGAAAT-CTTTC
* * ** * * *
154170 TTTGCCTTAATGTCCT-TAAAATCAAACCTTGTACTTTAAATGTGACAAGCATTAATTCTCGTAA
62 TTTGCCTCAATTTCCTGTAAAATCAAAGTTTGTACTTTAAATGAGACAAACATTGATTCTCGTAA
* * *
154234 AAGTTTCC-ATTCTTTCCAAGATTGGGAACCAA
127 AAG-TCCCTATTATTTCCAAGATTAGGAACCAA
* * * * * ** *
154266 AAACACATTCTCTTCATTAGGATACATGACATTGATGCTTTAG-TGTCGCAAGAGAAGCTTTTCT
1 AAACACATTCTCTTCTTTAGGATACATGATATTGATGATTT-GCTTTTGCTGGA-AATC-TTTCT
* * * * * * *
154330 TT--CT-AACGTTGCTGATAAAATCAAAGTTTGT-CTCTTAAATAAGGCAAAC-TTAAATACTCA
63 TTGCCTCAA-TTTCCTG-TAAAATCAAAGTTTGTACT-TTAAATGAGACAAACATT-GATTCTCG
* * **
154390 TACTAA-TCCTCT-TTCTTTCCAAGATTAGCCACC-A
124 TA-AAAGTCC-CTATTATTTCCAAGATTAGGAACCAA
* ** * * * **
154424 TAA-ACATAGTCTTCTGATACGGATACAGGATATTGATGATTTGGTTTCCCTAGG-AATGCTTT-
1 AAACACATTCTCTTCT-TTA-GGATACATGATATTGATGATTTGCTTTTGCT-GGAAAT-CTTTC
** * * * * * * * * * *
154486 TTT-CC-CACATTTTTTGTAGATTCTATGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGT-
62 TTTGCCTCA-ATTTCCTGTAAAATCAAAGTTTGTACTTTAAATGAGACAAACATTGATTCTCGTA
* ** * * *
154548 AAAGAT-CTTCATTCATTT-CGTGATTAGGCACTAC
126 AAAG-TCCCT-ATT-ATTTCCAAGATTAGGAACCAA
* * * * * *
154582 AAACACGTTCTCCTCATTAGGATA-AGTGGTATTGATGGTTTTCTTTTGCATGGAAATCTTCTCT
1 AAACACATTCTCTTCTTTAGGATACA-TGATATTGATGATTTGCTTTTGC-TGGAAATCTT-TCT
* * * * *
154646 TTTCCTTATTTTCCT-TAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCATAAA
63 TTGCCTCAATTTCCTGTAAAATCAAAGTTTGTACTTTAAATGAGACAAACATTGATTCTCGTAAA
** *
154710 AGTTTAC-ATTCTTTCCAAGATTAGGAACCAA
128 AG-TCCCTATTATTTCCAAGATTAGGAACCAA
* * * * * *
154741 AAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTTGC-TTTGCAGGAGAAGCTTT-TC
1 AAACACATTCTCTTCTTTAGGATACATGATATTGATG-ATTTGCTTTTGCTGGA-AATCTTTCT-
** ** * * * * * * *
154804 TT-CC-CACCGTTAATGATAAAATCAAAATTTGTCCCTTAAATAAGAGAAACA-TGTATACTCAT
63 TTGCCTCA-ATTTCCTG-TAAAATCAAAGTTTGTACTTTAAATGAGACAAACATTG-ATTCTCGT
* * * ** * * *
154866 ACTAATTCCCT-TTCTTTTTAGGATTAGGCACC-C
125 A-AAAGTCCCTATTATTTCCAAGATTAGGAACCAA
* ** * * ** ** *
154899 TAA-ACATAGTCTTCTCTTACGGATACAAGATATTGACGATTTAG-TTTCACAAGAAA-CATTTT
1 AAACACATTCTCTTCT-TTA-GGATACATGATATTGATGATTT-GCTTTTGCTGGAAATC-TTTC
* * * * * * * * * * *
154961 TTTCCCACCAATTT-TTG-AAAATTCTAAGTTCGTGCCTCAAATAAGACAAACATAGATTCTAGT
62 TTTGCC-TCAATTTCCTGTAAAA-TCAAAGTTTGTACTTTAAATGAGACAAACATTGATTCTCGT
* ** ** * * *
155024 -AAGGATCTTTATTCATTT-CGGGATTAGGTACTAT
125 AAAAG-TCCCTATT-ATTTCCAAGATTAGGAACCAA
* * * * * *
155058 AAACACATTCTCCTCATTAGGATAAAAGATATTGATGGTTTTC-TTTGCATGGAAATCTTTTCTT
1 AAACACATTCTCTTCTTTAGGATACATGATATTGATGATTTGCTTTTGC-TGGAAATC-TTTCTT
* * * * * *
155122 TACCTCATTTTTC-GTAAAATCAAAGTTAGTACTTTAAATGAGACAAGCATTGATTCTCGTAATA
64 TGCCTCAATTTCCTGTAAAATCAAAGTTTGTACTTTAAATGAGACAAACATTGATTCTCGTAAAA
* *
155186 GTCTCC-ATTCTTTCCAAGATTGGGAACCAA
129 GTC-CCTATTATTTCCAAGATTAGGAACCAA
* * * * *
155216 AAACACATTCTCTTCATTAGGATGCACGACATTGATGCTTTTGCTTT
1 AAACACATTCTCTTCTTTAGGATACATGATATTGATG-ATTTGCTTT
155263 GTAAGAGAAG
Statistics
Matches: 1695, Mismatches: 545, Indels: 355
0.65 0.21 0.14
Matches are distributed among these distances:
155 11 0.01
156 51 0.03
157 303 0.18
158 793 0.47
159 479 0.28
160 51 0.03
161 7 0.00
ACGTcount: A:0.30, C:0.18, G:0.15, T:0.37
Consensus pattern (158 bp):
AAACACATTCTCTTCTTTAGGATACATGATATTGATGATTTGCTTTTGCTGGAAATCTTTCTTTG
CCTCAATTTCCTGTAAAATCAAAGTTTGTACTTTAAATGAGACAAACATTGATTCTCGTAAAAGT
CCCTATTATTTCCAAGATTAGGAACCAA
Found at i:153659 original size:948 final size:947
Alignment explanation
Indices: 151498--155668 Score: 5073
Period size: 948 Copynumber: 4.4 Consensus size: 947
151488 TTTTTTATAG
* * * * *
151498 AATCAAAGTTTGTCTCTTAAATGAGACAAACATGAATAGTCATACTAATCCACTTTCTTTTCTA-
1 AATCAAAGTTTGTCTCTTAAATAAGGCAAACTTGAATACTCATACTAATCCACATTCTTTTC-AG
* * * * *
151562 GATTCGACACCATAAACATAGTCTTCTCATAAGGATACATGTTGTTGATGCTTTGGTTTCGTAAG
65 GATT-AACACCATAAACATAGTCTTTTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAG
* * * * *
151627 AAACGCTTTCTTCCCACCAATTTTTGATAAA--CATAAGTTCATTCCTCAAATTAGACAAACAAG
129 AAACACTTTCTTCCCACCAATTTTTG-TAAATTC-TAAGTTCGTGCCTCAAATGAGACAAACATG
* * * *
151690 GATTCTAGTAAGGATCTTCATTCTTTTCGTGGTTAGGCATTATAAACACATTCT-CTCCAATAGG
192 GATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCT-CATTAGG
* * * * * * *
151754 ATAATTGATATTGATAGTTTTTTTTTTTTTGCCTAGAAAT-TTTTGCTTTGTCTTATTTTTCTTA
256 ATAAATGATATTGAT-G---TTTTTCTTTTGCATGGAAATCTTTT-CTTTGCCTTAGTTTCCTTA
* * * *
151818 AAATCAAAGTTTGCACTTTAAAT-AGGACATGCATTGATTTTCGTTAAA-GTCTCCATTCTTTTC
316 AAATCAAAGTTTGTACTTTAAATGA-GACAAGCATTGATTCTCG-TAAAGGTC-CCATTCTTTCC
* * * *
151881 AACATTGGGAGCCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCA
378 AAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCA
* * * * * ** *
151946 AGAGAAGCTGTTCTCCCCACCATCATTGATTGAATCAAAGTTTGTCTCTTAAATAAGACAAACAT
443 AGAGAAGCTTTTCTTCCCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGGCAAACAT
* * * ** * *
152011 GAATAGTCATACTAATCCGCTTTCTTTTCTGATTAGGCACCATAAAC--AGTCTTCTCATAAGGA
508 GAATACTCATACTAATCCCCTTTTTTTTAGGATTAGCCACCATAAACATAGTCTTCTCATACGGA
* * * * * * ** * * * * *
152074 TACATGATATTGATGCTTCAGC-TTCATAAGTAATGCTTTCTTCCCGCCAATTTTTGAAAAGTAT
573 TACAGGATATTGACGATT-TGCTTTCACAAGGAACACTTTTTTTCCGACAATTTTTGAAAATTCT
* * * *
152138 AAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTCG-TTA
637 AAGTTCGTGCCTCAAATAAGACAAACATGGATTCTAGTAAGGATCATCATTCATTTCGT-GATTA
* * * * *
152202 GGCACTATAAATACATTC-TCCCCAAT-AGGATAAATGATATTAATGGTTTTCTTTTCCCTGGAA
701 GGCACTATAAACACATTCTTCTCC--TCAGGATAAATGATATTGATGG-TTTCTTTTGCATGGAA
* * * * *
152265 ATCTTTTTTTTGCCTTATTTTCCTTAAAATCAATGTTTGTACTTTAAATGAGACAAGCATAGATT
763 ATCTTTTCTTTGCCTCAATTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATT
* ** * * * *
152330 ATCGTAAAACCCTCCATTCCTTCCAAGATTGGGAACCAAAAACACATTCCCTTCCTTAGGACACA
828 CTCGTAAAAGTC-CCATTCTTTCCAAGATTGGGAACCAAAAACACATTCTCTTCATTAGGATACA
* * *
152395 TGACATTAATACTTCGATGTCGCAAGAGAAGCTTTTCTTTCTAACGTTGTTGATAA
892 TGACATTGATGCTTCGGTGTCGCAAGAGAAGCTTTTCTTTCTAACGTTGTTGATAA
* ** * *
152451 AATCAAAGTTTATCTCTTAAATAAGATAAACTTGAATACTCATACTAATCCATATTCTTTTTAGG
1 AATCAAAGTTTGTCTCTTAAATAAGGCAAACTTGAATACTCATACTAATCCACATTCTTTTCAGG
*
152516 ATTAACCACCATAAACATAGTCTTTTCATAAGGATACATGATATTGATGCTATGGTTTCGCAAGA
66 ATTAA-CACCATAAACATAGTCTTTTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGA
152581 AACACTTTCTTCCCACCAATTTTTGTAAATTCTAAGTTCGTGCC-CTAAATGAGACAAACATGGA
130 AACACTTTCTTCCCACCAATTTTTGTAAATTCTAAGTTCGTGCCTC-AAATGAGACAAACATGGA
* * * *
152645 TTCTAGTAGGGGTCTTCATTCATTTCGTGATTAGGCACTACAAACACATTCTCCTTATTAGGATA
194 TTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATA
*
152710 AATGATATTGATGTTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTCAGTTTCCTTAAAATCAAA
259 AATGATATTGATGTTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTAGTTTCCTTAAAATCAAA
* ** * *
152775 GTTTGCACTTTAAATGTTATAAGCATTGATTCTCGTAAAGGTCCCTATTCTTTCCAAGATTGGGA
324 GTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAGGTCCC-ATTCTTTCCAAGATTAGGA
* * *
152840 ACCAAAAACACATTCTCTTCTTTAGGATACATGACATTGATGCTTTGGTGTCGCTAGAGAAGC-T
388 ACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTT
* * ** * *
152904 TTCTTTCTAACGTTGCTGATAAAATCAAAGTTTGTCTCTTAAAGAAGGCAAACTTGAATACTCAT
453 TTCTTCCCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGGCAAACATGAATACTCAT
* * *
152969 ACTAATCCCCATTTTTTTTAGGATTAGCCACCATAAATATAGTCTTTTGATACGGATACAGGATA
518 ACTAATCCCC-TTTTTTTTAGGATTAGCCACCATAAACATAGTCTTCTCATACGGATACAGGATA
* ** * * * *
153034 TTGATGATTTGCTTTTTCTAGGAACACTTTTTTTCC-ACAATTTTTGTAGATTCTATGTTCGTGC
582 TTGACGATTTGCTTTCACAAGGAACACTTTTTTTCCGACAATTTTTGAAAATTCTAAGTTCGTGC
* *
153098 CTTAAATAAGACAAACATGGATTCTAGTAAGGATAATCATTCATTTCGTGATTAGGCACTATAAA
647 CTCAAATAAGACAAACATGGATTCTAGTAAGGATCATCATTCATTTCGTGATTAGGCACTATAAA
** *
153163 CACATTCTTCTCCTCAGGATGCATGATATTGATGGTTTCTTTTGCATGGAAATCTTCTCTTTGCC
712 CACATTCTTCTCCTCAGGATAAATGATATTGATGGTTTCTTTTGCATGGAAATCTTTTCTTTGCC
* *
153228 TCAATTTCCTTAAAATCAAAGTTTGTACTTTAAATGTGATAAGCATTGATTCTCGTAAAAGTCCC
777 TCAATTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCCC
* * *
153293 TATTATTTCCAAGATTGTGAACCAAAAACACATTCTCTTCTTTAGGATACATGACATTGATGCTT
842 -ATTCTTTCCAAGATTGGGAACCAAAAACACATTCTCTTCATTAGGATACATGACATTGATGCTT
*
153358 CGGTGTCGCAAGAGAAGC-TTTCTTTCTAATGTTGTTGATAA
906 CGGTGTCGCAAGAGAAGCTTTTCTTTCTAACGTTGTTGATAA
* *
153399 AATCAAAGTTTATCTCTTAAATAAGGTAAACTTGAATACTCATACTAATCCACATTCTTTTCAGG
1 AATCAAAGTTTGTCTCTTAAATAAGGCAAACTTGAATACTCATACTAATCCACATTCTTTTCAGG
* *
153464 ATTAACAACTATAAACATAGTCTTTTCATAAGGATACATGATATTGATGCTTTGGTTTTGCAAGA
66 ATTAAC-ACCATAAACATAGTCTTTTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGA
* * * *
153529 AACACATTCTTCCCACCAATTTTTGTAAATTCTAAGTTTGTGCCCCAAATGAGACACACATGGAT
130 AACACTTTCTTCCCACCAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGAT
* * * *
153594 TCTAGTAGGGGTCTTCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCATTTGGATAA
195 TCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * *
153659 ATGATATTGATGTTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTA-TTTCCTTAAAATCGATG
260 ATGATATTGATGTTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTAGTTTCCTTAAAATCAAAG
* * *
153723 TTTGTACTTTACATGAGACAAGCATTGACTT-GCGTAAAAGTGT-CCATTTTTTCCAAGATTAGG
325 TTTGTACTTTAAATGAGACAAGCATTGA-TTCTCGT-AAAG-GTCCCATTCTTTCCAAGATTAGG
* *
153786 AACCAAAAACACATTCCCTTCATTAGGATACATTACATTGATGTTTTGGTGTCGCAAGAGAAGCT
387 AACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCT
* * * *
153851 TTTCTTTCTAACGTTGTTGATAAAATC-AAGTTTGTCTCTTAAATAAGGCAAACCTGAATACTCA
452 TTTCTTCCCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGGCAAACATGAATACTCA
* * * *
153915 TACTAATCCCCATTCTTTTCAGGATTAGCCACCATAAACATAGTCTTCTGATATGGATACAGGAT
517 TACTAATCCCC-TTTTTTTTAGGATTAGCCACCATAAACATAGTCTTCTCATACGGATACAGGAT
* * * * * * * * *
153980 ATTGACGATTTGGTTTCACTAGGAACGC-TTTTTTCCTATAATTTTTGTAGATTTTATGTTCGTG
581 ATTGACGATTTGCTTTCACAAGGAACACTTTTTTTCCGACAATTTTTGAAAATTCTAAGTTCGTG
* *
154044 CCTCAAAAAAGACAAACATGGATTCTAGTGAGGATCATCATTCATTTCGTGATTAGGCACTATAA
646 CCTCAAATAAGACAAACATGGATTCTAGTAAGGATCATCATTCATTTCGTGATTAGGCACTATAA
* * ** *
154109 ACACATTCTTCACCTCAAGATGCATGATATTGATGGTCTTCTTTTGCATGGAAATATTTTCTTTG
711 ACACATTCTTCTCCTCAGGATAAATGATATTGATGGT-TTCTTTTGCATGGAAATCTTTTCTTTG
* * ** * *
154174 CCTTAATGTCCTTAAAATCAAACCTTGTACTTTAAATGTGACAAGCATTAATTCTCGTAAAAGTT
775 CCTCAATTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAG-T
*
154239 TCCATTCTTTCCAAGATTGGGAACCAAAAACACATTCTCTTCATTAGGATACATGACATTGATGC
839 CCCATTCTTTCCAAGATTGGGAACCAAAAACACATTCTCTTCATTAGGATACATGACATTGATGC
** *
154304 TTTAGTGTCGCAAGAGAAGCTTTTCTTTCTAACGTTGCTGATAA
904 TTCGGTGTCGCAAGAGAAGCTTTTCTTTCTAACGTTGTTGATAA
* * * * *
154348 AATCAAAGTTTGTCTCTTAAATAAGGCAAACTTAAATACTCATACTAATCCTCTTTCTTTCCAAG
1 AATCAAAGTTTGTCTCTTAAATAAGGCAAACTTGAATACTCATACTAATCCACATTCTTTTCAGG
* * * * * * * * *
154413 ATTAGCCACCATAAACATAGTCTTCTGATACGGATACAGGATATTGATGATTTGGTTTCCCTAGG
66 ATTA-ACACCATAAACATAGTCTTTTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGA
** * * * *
154478 AATGCTTTTTTCCCA-CATTTTTTGTAGATTCTATGTTCGTGCCTCAAATGAGACAAACATGGAT
130 AACACTTTCTTCCCACCAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGAT
* * *
154542 TCTAGTAAAGATCTTCATTCATTTCGTGATTAGGCACTACAAACACGTTCTCCTCATTAGGATAA
195 TCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
* * * * * *
154607 GTGGTATTGATGGTTTTCTTTTGCATGGAAATCTTCTCTTTTCCTTATTTTCCTTAAAATCAAAG
260 ATGATATTGATGTTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTAGTTTCCTTAAAATCAAAG
* * **
154672 TTTGTACTTTAAATGAGACAAGCATTGATTCTCATAAAAGTTTACATTCTTTCCAAGATTAGGAA
325 TTTGTACTTTAAATGAGACAAGCATTGATTCTCGT-AAAGGTCCCATTCTTTCCAAGATTAGGAA
* * *
154737 CCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTTGCT-TTGCAGGAGAAGCTT
389 CCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGC-TTTGGTGTCGCAAGAGAAGCTT
* * * * *
154801 TTCTTCCCACCGTTAATGATAAAATCAAAATTTGTCCCTTAAATAAGAG-AAACATGTATACTCA
453 TTCTTCCCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAG-GCAAACATGAATACTCA
* * * * *
154865 TACTAATTCCCTTTCTTTTTAGGATTAGGCACCCTAAACATAGTCTTCTCTTACGGATACAAGAT
517 TACTAATCCCCTTT-TTTTTAGGATTAGCCACCATAAACATAGTCTTCTCATACGGATACAGGAT
* *
154930 ATTGACGATTTAG-TTTCACAAGAAACA-TTTTTTTCCCACCAATTTTTGAAAATTCTAAGTTCG
581 ATTGACGATTT-GCTTTCACAAGGAACACTTTTTTTCCGA-CAATTTTTGAAAATTCTAAGTTCG
* * * * *
154993 TGCCTCAAATAAGACAAACATAGATTCTAGTAAGGATCTTTATTCATTTCGGGATTAGGTACTAT
644 TGCCTCAAATAAGACAAACATGGATTCTAGTAAGGATCATCATTCATTTCGTGATTAGGCACTAT
* * * *
155058 AAACACATTCTCCTCATTAGGATAAAAGATATTGATGGTTT-TCTTTGCATGGAAATCTTTTCTT
709 AAACACATTCTTCTCCTCAGGATAAATGATATTGATGGTTTCT-TTTGCATGGAAATCTTTTCTT
* * * * * *
155122 TACCTCATTTTTCGTAAAATCAAAGTTAGTACTTTAAATGAGACAAGCATTGATTCTCGTAATAG
773 TGCCTCAATTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAG
* *
155187 TCTCCATTCTTTCCAAGATTGGGAACCAAAAACACATTCTCTTCATTAGGATGCACGACATTGAT
838 TC-CCATTCTTTCCAAGATTGGGAACCAAAAACACATTCTCTTCATTAGGATACATGACATTGAT
* * * * * * ** *
155252 GCTTTTGCT-TTGTAAGAGAAGCTTTTCTTTCCACCGTTAATAATAA
902 GC-TTCGGTGTCGCAAGAGAAGCTTTTCTTTCTAACGTTGTTGATAA
* * * * * *
155298 AATCAAAATTTGTCCCTTAAAAAAGAG-AAACATGAATACTCATACTAATTCC-CATTTTTTTTA
1 AATCAAAGTTTGTCTCTTAAATAAG-GCAAACTTGAATACTCATACTAA-TCCACATTCTTTTCA
* * * * * *
155361 GGATTAGGCACCCTAAACATAGTTTTTTCTTACA-GATACAAGATATTGAT-CATTTAGTTTCGC
64 GGATTA-ACACCATAAACATAGTCTTTTCATA-AGGATACATGATATTGATGC-TTTGGTTTCGC
** * * *
155424 AAGAAACTTTTTTTTACCACCAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATAAGACAAACAT
126 AAGAAACACTTTCTTCCCACCAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACAT
* * * * *
155489 AGATTCTAATAAAGATTTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCCCATTAGG
191 GGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGG
* * *
155554 ATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTACC-T-GTTTTCCGTAAAAT
256 ATAAATGATATTGATGTTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTAG-TTTCCTTAAAAT
* * *
155617 CAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCATAAAAGTCTCCAT
320 CAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAGGTC-CCAT
155669 AAGATAAACA
Statistics
Matches: 2810, Mismatches: 359, Indels: 101
0.86 0.11 0.03
Matches are distributed among these distances:
946 8 0.00
947 356 0.13
948 716 0.25
949 623 0.22
950 560 0.20
951 309 0.11
952 8 0.00
953 227 0.08
954 3 0.00
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (947 bp):
AATCAAAGTTTGTCTCTTAAATAAGGCAAACTTGAATACTCATACTAATCCACATTCTTTTCAGG
ATTAACACCATAAACATAGTCTTTTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGAA
ACACTTTCTTCCCACCAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATT
CTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAA
TGATATTGATGTTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTAGTTTCCTTAAAATCAAAGT
TTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAGGTCCCATTCTTTCCAAGATTAGGAACC
AAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTC
TTCCCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGGCAAACATGAATACTCATACT
AATCCCCTTTTTTTTAGGATTAGCCACCATAAACATAGTCTTCTCATACGGATACAGGATATTGA
CGATTTGCTTTCACAAGGAACACTTTTTTTCCGACAATTTTTGAAAATTCTAAGTTCGTGCCTCA
AATAAGACAAACATGGATTCTAGTAAGGATCATCATTCATTTCGTGATTAGGCACTATAAACACA
TTCTTCTCCTCAGGATAAATGATATTGATGGTTTCTTTTGCATGGAAATCTTTTCTTTGCCTCAA
TTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCCCATTC
TTTCCAAGATTGGGAACCAAAAACACATTCTCTTCATTAGGATACATGACATTGATGCTTCGGTG
TCGCAAGAGAAGCTTTTCTTTCTAACGTTGTTGATAA
Found at i:154517 original size:475 final size:475
Alignment explanation
Indices: 151498--155668 Score: 4963
Period size: 475 Copynumber: 8.8 Consensus size: 475
151488 TTTTTTATAG
* * *
151498 AATCAAAGTTTGTCTCTTAAATGAGACAAACATGAATAGTCATACTAATCCACTTTCTTTTCTA-
1 AATCAAAGTTTGTCTCTTAAATAAGGCAAACATGAATACTCATACTAATCC-CTTTCTTTTC-AG
* * * * * *
151562 GATTCGACACCATAAACATAGTCTTCTCATAAGGATACATGTTGTTGATGCTTTGGTTT-CGTAA
64 GATTAGCCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGATTTGGTTTCCCT-A
* * * * * *
151626 GAAACGCTTTCTTCCCACCAATTTTTGATAAA--CATAAGTTCATTCCTCAAATTAGACAAACAA
128 GAAACACTTTTTTCCCACCAATTTTTG-TAAATTC-TAAGTTCGTGCCTCAAATAAGACAAACAT
* * * *
151689 GGATTCTAGTAAGGATCTTCATTCTTTTCGTGGTTAGGCATTATAAACACATTC-TCTCCAATAG
191 GGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTTCT-CATTAG
* * * * * * *
151753 GATAATTGATATTGATAGTTTTTTTTTTTTTGCCTAGAAAT-TTTTGCTTTGTCTTATTTTTCTT
255 GATAAATGATATTGAT-G---GTTTTCTTTTGCATGGAAATCTTTT-CTTTGCCTTATTTTCCTT
* * * * *
151817 AAAATCAAAGTTTGCACTTTAAAT-AGGACATGCATTGATTTTCGTTAAAGTCTCCATTCTTTTC
315 AAAATCAAAGTTTGTACTTTAAATGA-GACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCC
* *
151881 AACATTGGGAGCCAAAAACACATTC-CTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGC
379 AAGATTGGGAACCAAAAACACATTCTC-TTCATTAGGATACATGACATTGATGCTTTGGTGTCGC
* ** * * * ** **
151945 AAGAGAAGCTGTTCTCCCCACCATCATTGATTG
443 AAGAGAAGCTTTTCTTTCTAACGTTGTTGATAA
* * *
151978 AATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCGCTTTCTTTTC-TG
1 AATCAAAGTTTGTCTCTTAAATAAGGCAAACATGAATACTCATACTAATCC-CTTTCTTTTCAGG
* * ** * *
152042 ATTAGGCACCATAAAC--AGTCTTCTCATAAGGATACATGATATTGATGCTTCAGCTT-CATAAG
65 ATTAGCCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGATTTGGTTTCCCT-AG
* ** * * * * * * * *
152104 TAATGCTTTCTTCCCGCCAATTTTTGAAAAGTATAAGTTCATTCCTCAAATGAGACAAACATGGA
129 AAACACTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATAAGACAAACATGGA
* * * *
152169 TTCTAGTAAGGATCTTCATTCATTTCGTCG-TTAGGCACTATAAATACATTCTCCCCAATAGGAT
194 TTCTAGTAAGGATCTTCATTCATTTCGT-GATTAGGCACTATAAACACATTCTTCTCATTAGGAT
* * * *
152233 AAATGATATTAATGGTTTTCTTTTCCCTGGAAATCTTTTTTTTGCCTTATTTTCCTTAAAATCAA
258 AAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAA
* * * ** *
152298 TGTTTGTACTTTAAATGAGACAAGCATAGATTATCGTAAAACCCTCCATTCCTTCCAAGATTGGG
323 AGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGG
* * * * * * *
152363 AACCAAAAACACATTCCCTTCCTTAGGACACATGACATTAATACTTCGATGTCGCAAGAGAAGCT
388 AACCAAAAACACATTCTCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCT
152428 TTTCTTTCTAACGTTGTTGATAA
453 TTTCTTTCTAACGTTGTTGATAA
* ** * * *
152451 AATCAAAGTTTATCTCTTAAATAAGATAAACTTGAATACTCATACTAATCCATATTCTTTTTAGG
1 AATCAAAGTTTGTCTCTTAAATAAGGCAAACATGAATACTCATACTAATCCCT-TTCTTTTCAGG
* * * * * *
152516 ATTAACCACCATAAACATAGTCTTTTCATAAGGATACATGATATTGATGCTATGGTTTCGCAAGA
65 ATTAGCCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGATTTGGTTTCCCTAGA
* *
152581 AACACTTTCTTCCCACCAATTTTTGTAAATTCTAAGTTCGTGCC-CTAAATGAGACAAACATGGA
130 AACACTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTCGTGCCTC-AAATAAGACAAACATGGA
* * * * *
152645 TTCTAGTAGGGGTCTTCATTCATTTCGTGATTAGGCACTACAAACACATTCTCCTTATTAGGATA
194 TTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTTCTCATTAGGATA
* * *
152710 AATGATATTGATGTTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTCAGTTTCCTTAAAATCAAA
259 AATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAA
* ** * *
152775 GTTTGCACTTTAAATGTTATAAGCATTGATTCTCGTAAAGGTC-CCTATTCTTTCCAAGATTGGG
324 GTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCC-ATTCTTTCCAAGATTGGG
* *
152839 AACCAAAAACACATTCTCTTCTTTAGGATACATGACATTGATGCTTTGGTGTCGCTAGAGAAGC-
388 AACCAAAAACACATTCTCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCT
*
152903 TTTCTTTCTAACGTTGCTGATAA
453 TTTCTTTCTAACGTTGTTGATAA
* * *
152926 AATCAAAGTTTGTCTCTTAAAGAAGGCAAACTTGAATACTCATACTAATCCCCATTT-TTTTTAG
1 AATCAAAGTTTGTCTCTTAAATAAGGCAAACATGAATACTCATACTAAT-CCC-TTTCTTTTCAG
* * * * * * **
152990 GATTAGCCACCATAAATATAGTCTTTTGATACGGATACAGGATATTGATGATTTGCTTTTTCTAG
64 GATTAGCCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGATTTGGTTTCCCTAG
* * * * *
153055 GAACACTTTTTTTCCA-CAATTTTTGTAGATTCTATGTTCGTGCCTTAAATAAGACAAACATGGA
129 AAACACTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATAAGACAAACATGGA
** * * *
153119 TTCTAGTAAGGATAATCATTCATTTCGTGATTAGGCACTATAAACACATTCTTCTCCTCAGGATG
194 TTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTTCTCATTAGGATA
* * * *
153184 CATGATATTGATGG-TTTCTTTTGCATGGAAATCTTCTCTTTGCCTCAATTTCCTTAAAATCAAA
259 AATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAA
* * * *
153248 GTTTGTACTTTAAATGTGATAAGCATTGATTCTCGTAAAAGTC-CCTATTATTTCCAAGATTGTG
324 GTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCC-ATTCTTTCCAAGATTGGG
* *
153312 AACCAAAAACACATTCTCTTCTTTAGGATACATGACATTGATGCTTCGGTGTCGCAAGAGAAGC-
388 AACCAAAAACACATTCTCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCT
*
153376 TTTCTTTCTAATGTTGTTGATAA
453 TTTCTTTCTAACGTTGTTGATAA
* * * *
153399 AATCAAAGTTTATCTCTTAAATAAGGTAAACTTGAATACTCATACTAATCCACATTCTTTTCAGG
1 AATCAAAGTTTGTCTCTTAAATAAGGCAAACATGAATACTCATACTAATCC-CTTTCTTTTCAGG
* * * * * ** *
153464 ATTAACAACTATAAACATAGTCTTTTCATAAGGATACATGATATTGATGCTTTGGTTTTGCAAGA
65 ATTAGCCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGATTTGGTTTCCCTAGA
* * * * * *
153529 AACACATTCTTCCCACCAATTTTTGTAAATTCTAAGTTTGTGCCCCAAATGAGACACACATGGAT
130 AACACTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATAAGACAAACATGGAT
* * * * *
153594 TCTAGTAGGGGTCTTCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCATTTGGATAA
195 TCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTTCTCATTAGGATAA
* * * *
153659 ATGATATTGATGTTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTA-TTTCCTTAAAATCGATG
260 ATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAG
* * * * *
153723 TTTGTACTTTACATGAGACAAGCATTGACTT-GCGTAAAAGTGTCCATTTTTTCCAAGATTAGGA
325 TTTGTACTTTAAATGAGACAAGCATTGA-TTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGA
* * *
153787 ACCAAAAACACATTCCCTTCATTAGGATACATTACATTGATGTTTTGGTGTCGCAAGAGAAGCTT
389 ACCAAAAACACATTCTCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTT
153852 TTCTTTCTAACGTTGTTGATAA
454 TTCTTTCTAACGTTGTTGATAA
* *
153874 AATC-AAGTTTGTCTCTTAAATAAGGCAAACCTGAATACTCATACTAATCCCCATTCTTTTCAGG
1 AATCAAAGTTTGTCTCTTAAATAAGGCAAACATGAATACTCATACTAAT-CCCTTTCTTTTCAGG
* * * * * *
153938 ATTAGCCACCATAAACATAGTCTTCTGATATGGATACAGGATATTGACGATTTGGTTTCACTAGG
65 ATTAGCCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGATTTGGTTTCCCTAGA
* * * * * * *
154003 AACGCTTTTTTCCTA-TAATTTTTGTAGATTTTATGTTCGTGCCTCAAAAAAGACAAACATGGAT
130 AACACTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATAAGACAAACATGGAT
* * * * * * **
154067 TCTAGTGAGGATCATCATTCATTTCGTGATTAGGCACTATAAACACATTCTTCACCTCAAGATGC
195 TCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTTCTCATTAGGATAA
* * * * *
154132 ATGATATTGATGGTCTTCTTTTGCATGGAAATATTTTCTTTGCCTTAATGTCCTTAAAATCAAAC
260 ATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAG
* * * *
154197 CTTGTACTTTAAATGTGACAAGCATTAATTCTCGTAAAAGTTTCCATTCTTTCCAAGATTGGGAA
325 TTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAA
*
154262 CCAAAAACACATTCTCTTCATTAGGATACATGACATTGATGCTTTAGTGTCGCAAGAGAAGCTTT
390 CCAAAAACACATTCTCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTT
*
154327 TCTTTCTAACGTTGCTGATAA
455 TCTTTCTAACGTTGTTGATAA
* * * *
154348 AATCAAAGTTTGTCTCTTAAATAAGGCAAACTTAAATACTCATACTAATCCTCTTTCTTTCCAAG
1 AATCAAAGTTTGTCTCTTAAATAAGGCAAACATGAATACTCATACTAATCC-CTTTCTTTTCAGG
* * * *
154413 ATTAGCCACCATAAACATAGTCTTCTGATACGGATACAGGATATTGATGATTTGGTTTCCCTAGG
65 ATTAGCCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGATTTGGTTTCCCTAGA
** * * * *
154478 AATGCTTTTTTCCCA-CATTTTTTGTAGATTCTATGTTCGTGCCTCAAATGAGACAAACATGGAT
130 AACACTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATAAGACAAACATGGAT
* * * *
154542 TCTAGTAAAGATCTTCATTCATTTCGTGATTAGGCACTACAAACACGTTCTCCTCATTAGGATAA
195 TCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTTCTCATTAGGATAA
* * * *
154607 GTGGTATTGATGGTTTTCTTTTGCATGGAAATCTTCTCTTTTCCTTATTTTCCTTAAAATCAAAG
260 ATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAG
* * * *
154672 TTTGTACTTTAAATGAGACAAGCATTGATTCTCATAAAAGTTTACATTCTTTCCAAGATTAGGAA
325 TTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAA
* * * *
154737 CCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTTGCT-TTGCAGGAGAAGCTT
390 CCAAAAACACATTCTCTTCATTAGGATACATGACATTGATGC-TTTGGTGTCGCAAGAGAAGCTT
* * * **
154801 TTCTTCCCACCGTTAATGATAA
454 TTCTTTCTAACGTTGTTGATAA
* * * *
154823 AATCAAAATTTGTCCCTTAAATAAGAG-AAACATGTATACTCATACTAATTCCCTTTCTTTTTAG
1 AATCAAAGTTTGTCTCTTAAATAAG-GCAAACATGAATACTCATACTAA-TCCCTTTCTTTTCAG
* * * * * * * * *
154887 GATTAGGCACCCTAAACATAGTCTTCTCTTACGGATACAAGATATTGACGATTTAGTTTCACAAG
64 GATTAGCCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGATTTGGTTTCCCTAG
* * *
154952 AAACATTTTTTTCCCACCAATTTTTGAAAATTCTAAGTTCGTGCCTCAAATAAGACAAACATAGA
129 AAACACTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATAAGACAAACATGGA
* * * *
155017 TTCTAGTAAGGATCTTTATTCATTTCGGGATTAGGTACTATAAACACATTCTCCTCATTAGGATA
194 TTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTTCTCATTAGGATA
* * * * *
155082 AAAGATATTGATGGTTTTC-TTTGCATGGAAATCTTTTCTTTACCTCATTTTTCGTAAAATCAAA
259 AATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAA
* *
155146 GTTAGTACTTTAAATGAGACAAGCATTGATTCTCGTAATAGTCTCCATTCTTTCCAAGATTGGGA
324 GTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGA
* * * * *
155211 ACCAAAAACACATTCTCTTCATTAGGATGCACGACATTGATGCTTTTGCT-TTGTAAGAGAAGCT
389 ACCAAAAACACATTCTCTTCATTAGGATACATGACATTGATGC-TTTGGTGTCGCAAGAGAAGCT
* * ** *
155275 TTTCTTTCCACCGTTAATAATAA
453 TTTCTTTCTAACGTTGTTGATAA
* * * *
155298 AATCAAAATTTGTCCCTTAAAAAAGAG-AAACATGAATACTCATACTAATTCCCATTT-TTTTTA
1 AATCAAAGTTTGTCTCTTAAATAAG-GCAAACATGAATACTCATACTAA-TCCC-TTTCTTTTCA
* * * * * * * * * *
155361 GGATTAGGCACCCTAAACATAGTTTTTTCTTACA-GATACAAGATATTGATCATTTAGTTTCGCA
63 GGATTAGCCACCATAAACATAGTCTTCTCATA-AGGATACATGATATTGATGATTTGGTTTCCCT
** * *
155425 AGAAACTTTTTTTTACCACCAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATAAGACAAACATA
127 AGAAACACTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATAAGACAAACATG
* * * * *
155490 GATTCTAATAAAGATTTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCCCATTAGGA
192 GATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTTCTCATTAGGA
* * *
155555 TAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTACC-TGTTTTCCGTAAAATCA
257 TAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCA
* *
155619 AAGTTTGTACTTTAAATGAGACATGCATTGATTCTCATAAAAGTCTCCAT
322 AAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCAT
155669 AAGATAAACA
Statistics
Matches: 3235, Mismatches: 418, Indels: 81
0.87 0.11 0.02
Matches are distributed among these distances:
472 5 0.00
473 660 0.20
474 633 0.20
475 1228 0.38
476 472 0.15
477 160 0.05
478 2 0.00
479 15 0.00
480 60 0.02
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (475 bp):
AATCAAAGTTTGTCTCTTAAATAAGGCAAACATGAATACTCATACTAATCCCTTTCTTTTCAGGA
TTAGCCACCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGATTTGGTTTCCCTAGAA
ACACTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATAAGACAAACATGGATT
CTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTTCTCATTAGGATAAA
TGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGT
TTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAAC
CAAAAACACATTCTCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTT
CTTTCTAACGTTGTTGATAA
Found at i:154789 original size:159 final size:160
Alignment explanation
Indices: 152260--155263 Score: 441
Period size: 158 Copynumber: 19.0 Consensus size: 160
152250 TTCTTTTCCC
* *
152260 TGGAAATCTTTT-TTTTGCCTTATTTTCCT-TAAAATCAATGTTTGTACTTTAAATGAGACAAGC
1 TGGAAATCTTTTCTTTT-CCTTATTTTCCTGTAAAATCAAAGTTTGTACTTTAAATGAGACAAAC
* * ** * * * *
152323 A-TAGATTATCGTAAAACCCTCCATTCCTTCCAAGATTGGGAACCAAAAACACATTCCCTTCCTT
65 ATTA-ATTCTCATAAAAGTCTTCATTCTTTCCAAGATTAGGAACCAAAAACACATTCCCTTCATT
* * * * * *
152387 AGGACACATGACATTAATAC-TTCGATGTCGCA
129 AGGATACATGACATTGATGCTTTTGCT-TTGCA
* * * ** ** * * *
152419 -AGAGAAGCTTTTC-TTT-CTAACGTTGTTGATAAAATCAAAGTTTAT-CTCTTAAATAAGATAA
1 TGGA-AATCTTTTCTTTTCCTTATTTTCCTG-TAAAATCAAAGTTTGTACT-TTAAATGAGACAA
* * * ** * *** * * * **
152480 AC-TTGAATACTCATACTAA-TCCAT-ATTCTTTTTAGGATTAACCACCATAAACATAGTCTTTT
63 ACATT-AATTCTCATA-AAAGT-CTTCATTCTTTCCAAGATTAGGAACCAAAAACACATTCCCTT
* * * *
152542 CATAAGGATACATGATATTGATGC-TATGGTTTCGCA
125 CATTAGGATACATGACATTGATGCTTTTGCTTT-GCA
* * ** ** * * * * **
152578 -AGAAA-CACTTTCTTCCCACCAATTTT--TGTAAATTCTAAGTTCGTGCCCTAAATGAGACAAA
1 TGGAAATC-TTTTCTTTTC-CTTATTTTCCTGTAAAATCAAAGTTTGTACTTTAAATGAGACAAA
** *** ** * * *
152639 CATGGATTCT-AGTAGGGGTCTTCATTCATTT-CGTGATTAGGCACTACAAACACATTCTCCTT-
64 CATTAATTCTCA-TAAAAGTCTTCATTC-TTTCCAAGATTAGGAACCAAAAACACATTC-CCTTC
* * *
152701 ATTAGGATAAATGATATTGATG-TTTTTCTTTTGCA
126 ATTAGGATACATGACATTGATGCTTTTGC-TTTGCA
* * * * ** * *
152736 TGGAAATCTTTTCTTTGCCTCAGTTTCCT-TAAAATCAAAGTTTGCACTTTAAATGTTATAAGCA
1 TGGAAATCTTTTCTTTTCCTTATTTTCCTGTAAAATCAAAGTTTGTACTTTAAATGAGACAAACA
* * * * * * *
152800 TTGATTCTCGTAAAGGTC-CCTATTCTTTCCAAGATTGGGAACCAAAAACACATTCTCTTCTTTA
66 TTAATTCTCATAAAAGTCTTC-ATTCTTTCCAAGATTAGGAACCAAAAACACATTCCCTTCATTA
* *
152864 GGATACATGACATTGATGC-TTTGGTGTCGC-
130 GGATACATGACATTGATGCTTTTGCT-TTGCA
* * * ** * *
152894 TAGAGAAGC-TTTC-TTT-CTAACGTTGCTGATAAAATCAAAGTTTGT-CTCTTAAA-GAAGGCA
1 TGGA-AATCTTTTCTTTTCCTTATTTTCCTG-TAAAATCAAAGTTTGTACT-TTAAATG-AGACA
* * ** * ** * ** * * * * **
152954 AAC-TTGAATACTCATACTAA-TCCCCATTTTTTTTAGGATTAGCCACCATAAATATAGTCTTTT
62 AACATT-AATTCTCATA-AAAGTCTTCATTCTTTCCAAGATTAGGAACCAAAAACACATTCCCTT
* * * * *
153017 GA-TACGGATACAGGATATTGATG-ATTTGCTTTTTC-
125 CATTA-GGATACATGACATTGATGCTTTTGC-TTTGCA
** * * * * * * * *
153052 TAGGAACA-C-TTT-TTTTCCACAATTTT--TGTAGATTCTATGTTCGTGCCTTAAATAAGACAA
1 T-GGAA-ATCTTTTCTTTTCC-TTATTTTCCTGTAAAATCAAAGTTTGTACTTTAAATGAGACAA
** * ** ** * * * *
153112 ACATGGATTCT-AGT-AAGGATAATCATTCATTT-CGTGATTAGGCACTATAAACACATT-CTTC
63 ACATTAATTCTCA-TAAAAG-TCTTCATTC-TTTCCAAGATTAGGAACCAAAAACACATTCCCT-
* * * * *
153173 TCCTCAGGATGCATGATATTGATG-GTTT-CTTTTGCA
124 TCATTAGGATACATGACATTGATGCTTTTGC-TTTGCA
* * * * * * *
153209 TGGAAATCTTCTCTTTGCCTCAATTTCCT-TAAAATCAAAGTTTGTACTTTAAATGTGATAAGCA
1 TGGAAATCTTTTCTTTTCCTTATTTTCCTGTAAAATCAAAGTTTGTACTTTAAATGAGACAAACA
* * * * * *
153273 TTGATTCTCGTAAAAGTC-CCTATTATTTCCAAGATT-GTGAACCAAAAACACATTCTCTTCTTT
66 TTAATTCTCATAAAAGTCTTC-ATTCTTTCCAAGATTAG-GAACCAAAAACACATTCCCTTCATT
* * *
153336 AGGATACATGACATTGATGC-TTCGGTGTCGCA
129 AGGATACATGACATTGATGCTTTTGCT-TTGCA
* * * * ** * * **
153368 -AGAGAAGC-TTTC-TTT-CTAATGTTGTTGATAAAATCAAAGTTTAT-CTCTTAAATAAGGTAA
1 TGGA-AATCTTTTCTTTTCCTTATTTTCCTG-TAAAATCAAAGTTTGTACT-TTAAATGAGACAA
* * ** * * ** * * * * **
153428 AC-TTGAATACTCATACTAA-TCCACATTCTTTTCAGGATTAACAACTATAAACATAGTCTTTTC
63 ACATT-AATTCTCATA-AAAGTCTTCATTCTTTCCAAGATTAGGAACCAAAAACACATTCCCTTC
* * * *
153491 ATAAGGATACATGATATTGATGCTTTGGTTTTGCA
126 ATTAGGATACATGACATTGATGCTTTTGCTTTGCA
* ** ** ** * * * *** *
153526 -AGAAA-CACATTCTTCCCACCAATTTT--TGTAAATTCTAAGTTTGTGCCCCAAATGAGACACA
1 TGGAAATC-TTTTCTTTTC-CTTATTTTCCTGTAAAATCAAAGTTTGTACTTTAAATGAGACAAA
** *** * * * *
153587 CATGGATTCT-AGTAGGGGTCTTCATTCATTT-CATGATTAGGCACTATAAACACATTCTCC-TC
64 CATTAATTCTCA-TAAAAGTCTTCATTC-TTTCCAAGATTAGGAACCAAAAACACATTC-CCTTC
* * * *
153649 ATTTGGATAAATGATATTGATG-TTTTTCTTTTGCA
126 ATTAGGATACATGACATTGATGCTTTTGC-TTTGCA
* * * * * *
153684 TGAAAATCTTTTCTTTGCCTTA-TTTCCT-TAAAATCGATGTTTGTACTTTACATGAGACAAGCA
1 TGGAAATCTTTTCTTTTCCTTATTTTCCTGTAAAATCAAAGTTTGTACTTTAAATGAGACAAACA
* * * * * *
153747 TTGACTT-GCGTAAAAGTGTCCATTTTTTCCAAGATTAGGAACCAAAAACACATTCCCTTCATTA
66 TT-AATTCTCATAAAAGTCTTCATTCTTTCCAAGATTAGGAACCAAAAACACATTCCCTTCATTA
* * *
153811 GGATACATTACATTGATG-TTTTGGTGTCGCA
130 GGATACATGACATTGATGCTTTTGCT-TTGCA
* * * ** ** * *
153842 -AGAGAAGCTTTTC-TTT-CTAACGTTGTTGATAAAATC-AAGTTTGT-CTCTTAAATAAGGCAA
1 TGGA-AATCTTTTCTTTTCCTTATTTTCCTG-TAAAATCAAAGTTTGTACT-TTAAATGAGACAA
* * * * ** * * ** * * *
153902 ACCTGAATACTCATACTAA-TCCCCATTCTTTTCAGGATTAGCCACCATAAACATAGT--CTTC-
63 ACATTAATTCTCATA-AAAGTCTTCATTCTTTCCAAGATTAGGAACCAAAAACACATTCCCTTCA
* * * * *
153963 TGATATGGATACAGGATATTGACG-ATTTGGTTT-CA
127 T--TA-GGATACATGACATTGATGCTTTTGCTTTGCA
** * * ** * * * * * **
153998 CTAGG-AA-CGCTT-TTTTCCTATAATTTT--TGTAGATTTTATGTTCGTGCCTCAAAAAAGACA
1 -T-GGAAATCTTTTCTTTTCCT-T-ATTTTCCTGTAAAATCAAAGTTTGTACTTTAAATGAGACA
** * * * ** * * *
154058 AACATGGATTCT-AGT-GAGGATCATCATTCATTT-CGTGATTAGGCACTATAAACACATT--CT
62 AACATTAATTCTCA-TAAAAG-TCTTCATTC-TTTCCAAGATTAGGAACCAAAAACACATTCCCT
* * * * * *
154118 TCACCTCAAGATGCATGATATTGATGGTCTT-CTTTTGCA
124 TCA--TTAGGATACATGACATTGATGCTTTTGC-TTTGCA
* * * * ** * *
154157 TGGAAATATTTTCTTTGCCTTAATGTCCT-TAAAATCAAACCTTGTACTTTAAATGTGACAAGCA
1 TGGAAATCTTTTCTTTTCCTTATTTTCCTGTAAAATCAAAGTTTGTACTTTAAATGAGACAAACA
* * *
154221 TTAATTCTCGTAAAAGT-TTCCATTCTTTCCAAGATTGGGAACCAAAAACACATTCTCTTCATTA
66 TTAATTCTCATAAAAGTCTT-CATTCTTTCCAAGATTAGGAACCAAAAACACATTCCCTTCATTA
* *
154285 GGATACATGACATTGATGCTTTAG-TGTCGCA
130 GGATACATGACATTGATGCTTTTGCT-TTGCA
* * * ** * * *
154316 -AGAGAAGCTTTTC-TTT-CTAACGTTGCTGATAAAATCAAAGTTTGT-CTCTTAAATAAGGCAA
1 TGGA-AATCTTTTCTTTTCCTTATTTTCCTG-TAAAATCAAAGTTTGTACT-TTAAATGAGACAA
* * * * ** * * *
154377 AC-TTAAATACTCATACTAA-TCCTCTTTCTTTCCAAGATTAGCCACCATAAACATAGT--CTTC
63 ACATT-AATTCTCATA-AAAGTCTTCATTCTTTCCAAGATTAGGAACCAAAAACACATTCCCTTC
* * * * * *
154438 -TGATACGGATACAGGATATTGATG-ATTTGGTTTCCC
126 AT--TA-GGATACATGACATTGATGCTTTTGCTTTGCA
* ** * * * * * * * * *
154474 TAGG-AATGC-TTT-TTTCCCACATTTT-TTGTAGATTCTATGTTCGTGCCTCAAATGAGACAAA
1 T-GGAAAT-CTTTTCTTTTCCTTATTTTCCTGTAAAATCAAAGTTTGTACTTTAAATGAGACAAA
** ** * * * *
154535 CATGGATTCT-AGT-AAAGATCTTCATTCATTT-CGTGATTAGGCACTACAAACACGTTCTCC-T
64 CATTAATTCTCA-TAAAAG-TCTTCATTC-TTTCCAAGATTAGGAACCAAAAACACATTC-CCTT
** *
154596 CATTAGGATA-AGTGGTATTGATGGTTTT-CTTTTGCA
125 CATTAGGATACA-TGACATTGATGCTTTTGC-TTTGCA
* *
154632 TGGAAATCTTCTCTTTTCCTTATTTTCCT-TAAAATCAAAGTTTGTACTTTAAATGAGACAAGCA
1 TGGAAATCTTTTCTTTTCCTTATTTTCCTGTAAAATCAAAGTTTGTACTTTAAATGAGACAAACA
*
154696 TTGATTCTCATAAAAGT-TTACATTCTTTCCAAGATTAGGAACCAAAAACACATTCCCTTCATTA
66 TTAATTCTCATAAAAGTCTT-CATTCTTTCCAAGATTAGGAACCAAAAACACATTCCCTTCATTA
154760 GGATACATGACATTGATGCTTTTGCTTTGCA
130 GGATACATGACATTGATGCTTTTGCTTTGCA
* * ** ** * * * * *
154791 -GGAGAAGCTTTTC--TTCC-CACCGTTAATGATAAAATCAAAATTTGTCCCTTAAATAAGAGAA
1 TGGA-AATCTTTTCTTTTCCTTA-TTTTCCTG-TAAAATCAAAGTTTGTACTTTAAATGAGACAA
* * * * * ** * * ** * *
154852 ACATGT-ATACTCATACTAATTC-CCTTTCTTTTTAGGATTAGGCACCCTAAACATAGT--CTTC
63 ACAT-TAATTCTCATA-AAAGTCTTCATTCTTTCCAAGATTAGGAACCAAAAACACATTCCCTTC
* * * * * *
154913 TCTTACGGATACAAGATATTGACGATTTAG-TTT-CA
126 -ATTA-GGATACATGACATTGATGCTTTTGCTTTGCA
** * ** * * * * * *
154948 CAAGAAA-CATTTT-TTTCCCACCAATTTT--TG-AAAATTCTAAGTTCGTGCCTCAAATAAGAC
1 -TGGAAATC-TTTTCTTT-TC-CTTATTTTCCTGTAAAA-TCAAAGTTTGTACTTTAAATGAGAC
* * ** * * *
155008 AAACA-TAGATTCT-AGT-AAGGATCTTTATTCATTT-CGGGATTAGGTACTATAAACACATTCT
61 AAACATTA-ATTCTCA-TAAAAG-TCTTCATTC-TTTCCAAGATTAGGAACCAAAAACACATTC-
* * * *
155069 CC-TCATTAGGATAAAAGATATTGATGGTTTT-CTTTGCA
121 CCTTCATTAGGATACATGACATTGATGCTTTTGCTTTGCA
* * * * *
155107 TGGAAATCTTTTCTTTACCTCATTTTTC-GTAAAATCAAAGTTAGTACTTTAAATGAGACAAGCA
1 TGGAAATCTTTTCTTTTCCTTATTTTCCTGTAAAATCAAAGTTTGTACTTTAAATGAGACAAACA
* * * * * *
155171 TTGATTCTCGTAATAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAACACATTCTCTTCATTAG
66 TTAATTCTCATAAAAGTCTTCATTCTTTCCAAGATTAGGAACCAAAAACACATTCCCTTCATTAG
* *
155236 GATGCACGACATTGATGCTTTTGCTTTG
131 GATACATGACATTGATGCTTTTGCTTTG
155264 TAAGAGAAGC
Statistics
Matches: 1984, Mismatches: 636, Indels: 450
0.65 0.21 0.15
Matches are distributed among these distances:
155 6 0.00
156 54 0.03
157 322 0.16
158 881 0.44
159 658 0.33
160 42 0.02
161 20 0.01
162 1 0.00
ACGTcount: A:0.30, C:0.18, G:0.15, T:0.37
Consensus pattern (160 bp):
TGGAAATCTTTTCTTTTCCTTATTTTCCTGTAAAATCAAAGTTTGTACTTTAAATGAGACAAACA
TTAATTCTCATAAAAGTCTTCATTCTTTCCAAGATTAGGAACCAAAAACACATTCCCTTCATTAG
GATACATGACATTGATGCTTTTGCTTTGCA
Found at i:156614 original size:476 final size:474
Alignment explanation
Indices: 155667--161448 Score: 6321
Period size: 476 Copynumber: 12.1 Consensus size: 474
155657 AAAAGTCTCC
* * * * * * *
155667 ATAAGATAAACACGAATACTCATACTAATCCACATTCTTTTCTAGATTAGGCCCCATAAACAAAT
1 ATAAGACAAACATGAATAGTCATACTAATCCACATTCTTTT-TGGATTAGGCACCATAAACATAG
* * * *
155732 TCCTCTAATAAGGATACATGATATTGATGCTTTGGTTTCGCAAAAAACACTTTCTTCCCACCAAT
65 TCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAAT
* * * * * * * *
155797 TTTTGTTAATTCA-AATTTC-GTGCCCCAAATGAGATC-AGCAAGGATTCTAGTAAGTATCTTCA
130 TTTTGTAAAGT-ATAAGTTCACTG-CTCAAATGAGA-CAAACATGGATTCTAGTAAGGATCTTCA
* *
155859 TTCATTTCATGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAACGATATTGATGGTTTT
192 TTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGG-TTT
* * *
155924 TTTTTTGCGTGGAAATCTTTTTTTTGCCTTATTTTCCTTAAAATCAAAGTTTATACTTTAAATGA
256 TCTTTTGC-TGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGA
* * * * * * *
155989 GACATGCGTTGATTCTCGCAAAAGTCTCCATTATTTTCAAGATTAGGAACCAAAATCACATTCCT
320 GACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCC
* * * *
156054 TTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTGTT
385 TTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTCCCAACATTATT
*
156119 GATAGAATCAAAG-TTGTCTCTTAA
450 GATAAAATCAAAGTTTGTCTCTTAA
* * * *
156143 GTAAGACAAACGTGAATACTCATACTAATCCCCATTCTTTTTAGGATTAGGCACCATAAACATAG
1 ATAAGACAAACATGAATAGTCATACTAATCCACATTCTTTTT-GGATTAGGCACCATAAACATAG
* * * * *
156208 TCTTTTCATAAGGATACATGATCTTGATTCTTTGGTTTCGCAGGATAA-GCTTTCTTCTCACCAA
65 TCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGA-AACGCTTTCTTCCCACCAA
* * * * * **
156272 TTTTTTTAAAGTATGAGTTTACTGCTCAAATGAGACAAACAAGGATTCTTGTTGGGATCTTCATT
129 TTTTTGTAAAGTATAAGTTCACTGCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATT
* * *
156337 CATTTCGTGATTAGGCACTATAAACACATTCTTCTCTTTAGGATAAATGATATTTATGGTTTTCT
194 CATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCT
* * * * *
156402 TTTGCACGAAAATCTTTTCTTTGTCTTATTTTCCTTAAAATCAAAGTTTATATTTTAAATGAGAC
259 TTTGC-TGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGAC
* *
156467 ATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAACATTGGGAACCAAAAACACATTCCCTTC
323 AAGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTC
* ** *
156532 ATTAGGATACATTACATTGATGCTTTGGTGTTACAAGA-AAGGCTTTTCTTCCCAACATTATCGA
388 ATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAA-GCTTTTCTTCCCAACATTATTGA
*
156596 TAAAATCAAAATTTGTCTCTTAA
452 TAAAATCAAAGTTTGTCTCTTAA
** * *
156619 ATAAGACAAAGTTGAATACTCATACTAATCC-CATTCTTTTTAGGATTAGGCACCATTAACATAG
1 ATAAGACAAACATGAATAGTCATACTAATCCACATTCTTTTT-GGATTAGGCACCATAAACATAG
* * * * ** * * *
156683 TCTTCTTATATGGATACAGGATATTCATGAATTGGTTTCCCAAGAAACGCTTTTTTCCCA-TAAT
65 TCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAAT
* * * * ** * *
156747 TTTTGTAGATTCTATGTT-TGTGCCTTAAATGAGAGAAACATGGATTCTAGTAAGGATCTTCATT
130 TTTTGTAAAGTATAAGTTCACTG-CTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATT
*
156811 CATTTCGTGATTAGGCACTATAAACACATACTCCTCATTAGGATAAATGATATTGATGGTTTTCT
194 CATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCT
* * *
156876 TTTGCATGGAAATCTTTTCTTTGACTTGTTTTCCTTAAAATCAGAGTTTGTACTTTAAATGAGAC
259 TTTGC-TGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGAC
* * *
156941 ATGCATTGATTCCCGTAAAAGTCTCCACTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTC
323 AAGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTC
* * *
157006 ATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGATAAGCTGTTC-TCCCTACCATTATTGA
388 ATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTCCC-AACATTATTGA
*
157070 TAGAATCAAAGTTTGTCTCTTAA
452 TAAAATCAAAGTTTGTCTCTTAA
* *
157093 ATAAGACAAACATGAATAGTCATACTAATCCACTTTCTTTTCTGGATTAGGCACCATAAACATTG
1 ATAAGACAAACATGAATAGTCATACTAATCCACATTCTTTT-TGGATTAGGCACCATAAACATAG
* * * *
157158 TCTTCGT-ATAAGGACACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTTCTTCCCCCCAA
65 TCTTC-TCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAA
* * * * * *
157222 TTTTTGAAAAGTAGAAGCTCA-TTCTTCAAATGAGACAAAGATAGATTCTAGTAAGGATCTTCAT
129 TTTTTGTAAAGTATAAGTTCACTGC-TCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCAT
* * *
157286 TCATTTCGTGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATTGATGGTTTTC
193 TCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTC
* * *
157351 TTCTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGCTTGTACTGTAAATGAGA
258 TTTTG-CTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGA
* * * * *
157416 CAAGCATTGATTCTCGTAAAAGTCTCTATTCTTTCCATGATTAGGAACCAAAAACGCAATT-CCT
322 CAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACAC-ATTCCCT
* * * * *
157480 TCATTAGAATACATGACATTGATGCTTTGGTGTCGCAATAGAAGCTTTTCTTTCTAACATTGTTG
386 TCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTCCCAACATTATTG
* *
157545 ATAAAATCAAAATTTGTCTCTTAT
451 ATAAAATCAAAGTTTGTCTCTTAA
* * * * ** * * *
157569 ACAAGACAAACTTGAGTAGTCATAGTAATCCATTTTTTTTTCTGGACTAGGCGCCATAAACATAG
1 ATAAGACAAACATGAATAGTCATACTAATCCACATTCTTTT-TGGATTAGGCACCATAAACATAG
* * * * *
157634 TCTTCCCATAAGGATACATGATATCGATGCTTTGGTTTTGTAAGAAATGCTTTCTTCCCACCAAT
65 TCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAAT
* * * * * * * *
157699 TTTTGAAAAGCATAAGTTCATTCCTCAAATTAGACAAACAAGGATTCTAGTAAGGATTTTCAGTC
130 TTTTGTAAAGTATAAGTTCACTGCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTC
* * * *
157764 ATTTCGTGGTTAGGCACTATAAACACATTCTCCCCAATAGGATCAATGATATTGATGGTTTTCTT
195 ATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTT
* ** *
157829 TTGCCTGGAAATTTTTTCTTTGTGTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATAAGACA
260 TTG-CTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACA
* * * * *
157894 TGTATTGATTCTCGTAAAAGTCTCCATTCTTTTCAACATTGGGAGCCAAAAACACATTCCCTTCG
324 AGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCA
* * * * *
157959 TTAGGATACACGACATTGATGCTTTGGTGTCGCAAGAGAAGCTGTTCTCCCCACCGTTATTGATA
389 TTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTCCCAACATTATTGATA
*
158024 GAATCAAAGTTTGTCTCTTAA
454 AAATCAAAGTTTGTCTCTTAA
* **
158045 ATAAGACAAACATGAAGAGTCATACTAATCCATTTTCTTTTTTGGATTAGGCACCATAAACATAG
1 ATAAGACAAACATGAATAGTCATACTAATCCACATTC-TTTTTGGATTAGGCACCATAAACATAG
* * * * *
158110 TCTTTTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTTTTTCCCACTAAT
65 TCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAAT
* * * * *
158175 TTTTG-AAACGTATAAGTTCATTACCCAAATAAGACAAACATGGATT-TAGAAAGGATCTTCATT
130 TTTTGTAAA-GTATAAGTTCACTGCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATT
* * *
158238 CATTTCGTTG-CTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATTGATGGTTTTC
194 CATTTCG-TGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTC
* * *
158302 TTTTGCCTGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGATTGCACTTTAAATGAGA
258 TTTTG-CTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGA
* * * * *
158367 CAAGCATAGATTCTCGTAAAAGTCTCCACTCTTTCCAGGATTGGGAACCAACAACACATTCCCTT
322 CAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTT
* * * * * *
158432 CATTAGAATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTTCTAACGTTGTTGA
387 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTCCCAACATTATTGA
158497 TAAAATCAAAGTTTGTCTCTTAA
452 TAAAATCAAAGTTTGTCTCTTAA
* *
158520 ATAAGACAAACATGAATAGTCATAATAATCCACTTTCTTTTCTGGATT-GGCACCATAAACATAG
1 ATAAGACAAACATGAATAGTCATACTAATCCACATTCTTTT-TGGATTAGGCACCATAAACATAG
* * * * * *
158584 TCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTCCACAAGATATGCTTTCTTCTCACCAAT
65 TCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAAT
* * * * *
158649 TTTTGTAAAGTATGAGTTCATTGCTCAAATGAGACAAACATGGATTCTTGTAGGGATCTTCATTA
130 TTTTGTAAAGTATAAGTTCACTGCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTC
* * * * * *
158714 ATTTCCTAATTAGGCACTATAAACACATTCTCCTCATTACGATAAAAGATATTTATGATTTTCTT
195 ATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTT
* * *
158779 TTGCATTGAAATCTTTTCTTTGTCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATAAGACA
260 TTGC-TGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACA
* * * *
158844 TGCATTGATTCTCGTAAAAGTATCCATTCTTTTCAAGATTGGGAACCAAAAACACTTTCCCTTCG
324 AGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCA
* ** * *
158909 TTAGGATACTTGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTGGT-TTCGTAAGA-AACGCT
389 TTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTT--TCTTCCCAACATTA----
** *** * ** ** *
158972 TTCTTCCCACCAATTTTTGTAACGT--
448 TTGATAAAATCAAAGTTTGTCTCTTAA
* ** *** ** ** * **
158997 ATAAGTTCATGCCCCAA-A-T-A-A-GGAT--ACA-TGATCTT-GATTAGGCACCGCAAACATAG
1 ATAAG-ACAAACATGAATAGTCATACTAATCCACATTCTTTTTGGATTAGGCACCATAAACATAG
* * * * * * * * * * *
159053 TCTTCTCATAAGGATTAGGCACCGCAAACATAGTCTTCTCATAAGG-AT-ACATGATCTTGATGC
65 TCTTCTCATAAGGA-TA--CA-TG---ATATTG-ATGCT--T-TGGTTTCGCAAGA----AACGC
* ** * * * * **
159116 TTTGGTTCCGCAAGATATACTTTCTTCTCACCAATTTTTGTA-AAGTATGA--GTTC-ATTG-CT
115 TTT-CTTCC-C-A-CCA-A-TTT-TTGT-A--AA-----GTATAAGT-TCACTGCTCAAATGAGA
* ** * * * * * ***
159176 C-AA-ATGAGA--CAAACATGGATTCTT-GTACGGATCTTCATTAATTTCCTGATTAGGCACTAT
164 CAAACATG-GATTCTAGTAAGGA-TCTTCATTC--AT-TTC-GTGA--T--T-AGGC---ACTAT
* *
159236 AAACACATTCTCCTCATTATGATAAATGATATTGATGGTTTTCTTTTGCCTGGAAAACTTTTCTT
215 AAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTG-CTGGAAATCTTTTCTT
* * * *
159301 TGCCTTATTTTCCTTAAAATCAAAGATTGCACTTTAAAAGAGACAAGCATAGATTCTCGTAAAAG
279 TGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAG
* * * *
159366 TCTCCACTCTTTCCAAGATTGGGAACCAAAAACACATTCCCCTCATTAGAATACATGACATTGAT
344 TCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGAT
* * *
159431 GCTTTGGTGTCGCAAGAGAAGCTGTTC-TCCCCACTATTATTGATAAAATCAAAGTTTATCTCTT
409 GCTTTGGTGTCGCAAGAGAAGCTTTTCTTCCCAAC-ATTATTGATAAAATCAAAGTTTGTCTCTT
159495 AA
473 AA
*** *
159497 ATAAGACAAACATGAATAGTCATACTAATCCGTTTTCTTTTCTGGATTAGGTACCATAAACATAG
1 ATAAGACAAACATGAATAGTCATACTAATCCACATTCTTTT-TGGATTAGGCACCATAAACATAG
* * *
159562 TCTTCTCATATGGATACATGATATTGATGCTTCGGTTTCGCAAGAAATGCTTTCTTCCCACCAAT
65 TCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAAT
* * * *
159627 TTTTGTAAATTCTAAGTT-AATGCCTCAAATGAGACAAATATGGATTCTAGTAAGGATCTTCATT
130 TTTTGTAAAGTATAAGTTCACTG-CTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATT
*
159691 CATTTCATGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCT
194 CATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCT
* * * *
159756 TTTGAATGAAAATATTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAAAC
259 TTTG-CTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGAC
* * *
159821 AACCATTAATTCTCGTAAAATTCTCCATT-TTTTCCAAGATTGGGAACCAAAAACACATTCCCTT
323 AAGCATTGATTCTCGTAAAAGTCTCCATTCTTTT-CAAGATTGGGAACCAAAAACACATTCCCTT
* * * * * ** *
159885 CTTTAGGATACATGACATTGACGCTTTGGTGTCTCAAGAGAAGCTTTT-TTTCTAATGTTGTTGA
387 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTCCCAACATTATTGA
159949 TAAAATC-AAGTTTGTCTCTTAA
452 TAAAATCAAAGTTTGTCTCTTAA
* * * * * *
159971 ATAAGGCAAACTTGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGCCACCATAAACATAG
1 ATAAGACAAACATGAATAGTCATACTAATCCACATTCTTTT-TGGATTAGGCACCATAAACATAG
* * * * * * * *
160036 TCTTCTGC-TACGGATACAGGATATTGATGATTTGGTAT-GCTAGGAATGCTTTTTTCCCA-CAA
65 TCTTCT-CATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAA
* * * * * * *
160098 TTTTTGTAGATTCTAGGTTC-GTGCATCAAATGAGACAAATATGGATTCTAGTAAGGATCATCAT
129 TTTTTGTAAAGTATAAGTTCACTGC-TCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCAT
* * * * ***
160162 TCATTTCGTGATTAGGCTCTATAAACACATTCTTCTCCTCAGGATGCTTGATATTGATGGTTTTC
193 TCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTC
* * * * *
160227 TTTTGCTTGAAAATCTTCTCTTTGCCTCACTTTCCTTAAAATCAAAGATTGTACTTTAAATGAGA
258 TTTTGC-TGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGA
* *
160292 CAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAACACATTCTCTT
322 CAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTT
* * * * *
160357 CATTAGGATATATGACATTAATGCTTTGGTGTCGTAAGAGAAGCTTTTCTTTCCAACGTTATTGA
387 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTCCCAACATTATTGA
*
160422 TAAAATCAAAGTTTGTCACTTAA
452 TAAAATCAAAGTTTGTCTCTTAA
* * * * * *
160445 ATAAGGCAAACTTGAGTACTTATACTAATCCACATTCTTTTTAGGATTAGGCACCCTAAACATAG
1 ATAAGACAAACATGAATAGTCATACTAATCCACATTCTTTTT-GGATTAGGCACCATAAACATAG
* * * * * * *
160510 TCTTCTTATACGGATACAAGATATTGATGATTTAGTTTTGCAAGAAACGCTTTTTTCCCACCAAT
65 TCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAAT
* * * * *
160575 TTTTGTAAATTCTAAGTTCA-TGCCTCAAATGCGACTATCATGGATTCTAGTAAGGATCTTCATT
130 TTTTGTAAAGTATAAGTTCACTG-CTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATT
*
160639 CATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTGATGGATTTT-
194 CATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGG-TTTTC
* * * ** *
160703 TTTTGCGTGGAAATCTTTTCATTGTCTTATTTTCCTCAAAATCAAAGTTTGTACCATAAATAAGA
258 TTTTGC-TGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGA
* * * * * *
160768 CATGCGTCGATTCTCCTAAAAGTCTCCATTCTTTTCAGGATTGGGATCCAAAAACACATTCCCTT
322 CAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTT
* * * * * *
160833 CATTAAGATACATGGCATTGATGCTTTGGTGTCGTAAGAGAAG-TTGTTCTCCCCACCGTTATTG
387 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTT-TTCTTCCCAACATTATTG
* *
160897 ATAGAATCAAAGTTTGTCTTTTAA
451 ATAAAATCAAAGTTTGTCTCTTAA
* *
160921 ATAAGACAAACATGAATAGTCATACTAATCCACTTTCTTTATTGGATTAGGCACTATAAACATAG
1 ATAAGACAAACATGAATAGTCATACTAATCCACATTCTTT-TTGGATTAGGCACCATAAACATAG
* * **
160986 TCTTCTCATAAGGATACATGATATCGATGCTTTCGTTTCATAAGAAACGCTTTCTTCCCACCAAT
65 TCTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAAT
* * * * * ** *
161051 TCTAGAAAAGTATAAGTTCATTTCAAAAATGAGACAAACACGGATTCTAGTAAGGATCTTCATTC
130 TTTTGTAAAGTATAAGTTCACTGCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTC
* **
161116 ATTTCGTGGTTAGGCACTATAAACACATTCTCC-CGAACAGGATAAATGATATTGATGGTTTTCT
195 ATTTCGTGATTAGGCACTATAAACACATTCTCCTC-ATTAGGATAAATGATATTGATGGTTTTCT
* * *
161180 TCTACGTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGCTTGTACTTTAAATGAGAC
259 TTTGC-TGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGAC
* * * * *
161245 AAGCATTGATTCTCGTAAAAGTGTCCATTCTTTCCATGATTAGGAACCAAAAACGCAATT-CCTT
323 AAGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACAC-ATTCCCTT
* * * * * * *
161309 CATTAGAATACATGACATTGATGCTTTGGTGTCGCAATAGAAGCTTTTCTTTCAAACAATGTTTA
387 CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTCCCAACATTATTGA
*
161374 TAAAATCAAAGTTTGTCTCTTAT
452 TAAAATCAAAGTTTGTCTCTTAA
*
161397 ATAAGACAAACATGAATAGTCATACTAATCCACTTTCTTTTCTGGATTAGGC
1 ATAAGACAAACATGAATAGTCATACTAATCCACATTCTTTT-TGGATTAGGC
161449 GCTGTCGTAA
Statistics
Matches: 4481, Mismatches: 688, Indels: 274
0.82 0.13 0.05
Matches are distributed among these distances:
468 4 0.00
469 29 0.01
470 5 0.00
471 3 0.00
472 274 0.06
473 50 0.01
474 655 0.15
475 921 0.21
476 2049 0.46
477 39 0.01
478 10 0.00
479 16 0.00
480 4 0.00
481 2 0.00
482 13 0.00
483 5 0.00
484 6 0.00
485 5 0.00
486 9 0.00
487 8 0.00
488 12 0.00
489 6 0.00
490 10 0.00
491 8 0.00
492 9 0.00
493 5 0.00
494 7 0.00
495 7 0.00
496 11 0.00
497 5 0.00
498 16 0.00
499 8 0.00
500 14 0.00
501 5 0.00
502 207 0.05
503 2 0.00
504 2 0.00
505 1 0.00
506 2 0.00
507 3 0.00
508 3 0.00
509 31 0.01
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.36
Consensus pattern (474 bp):
ATAAGACAAACATGAATAGTCATACTAATCCACATTCTTTTTGGATTAGGCACCATAAACATAGT
CTTCTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAATT
TTTGTAAAGTATAAGTTCACTGCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCA
TTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTT
TGCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAG
CATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATT
AGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTCCCAACATTATTGATAAA
ATCAAAGTTTGTCTCTTAA
Found at i:159074 original size:33 final size:33
Alignment explanation
Indices: 159032--159100 Score: 138
Period size: 33 Copynumber: 2.1 Consensus size: 33
159022 ACATGATCTT
159032 GATTAGGCACCGCAAACATAGTCTTCTCATAAG
1 GATTAGGCACCGCAAACATAGTCTTCTCATAAG
159065 GATTAGGCACCGCAAACATAGTCTTCTCATAAG
1 GATTAGGCACCGCAAACATAGTCTTCTCATAAG
159098 GAT
1 GAT
159101 ACATGATCTT
Statistics
Matches: 36, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
33 36 1.00
ACGTcount: A:0.33, C:0.23, G:0.19, T:0.25
Consensus pattern (33 bp):
GATTAGGCACCGCAAACATAGTCTTCTCATAAG
Found at i:164575 original size:52 final size:52
Alignment explanation
Indices: 164497--164695 Score: 319
Period size: 52 Copynumber: 3.8 Consensus size: 52
164487 CGAAATATGA
* *
164497 AAATTTGCCTGCATGTATCGATACATTGAATAGTGTATCGATACATCTTGGC
1 AAATTTGCCTGCATGTATCGATACATTGTATAGTGTATCGATACATCTGGGC
*
164549 AAATTTGCCTGCATGTATCGATACATTTTATAGTGTATCGATACATCTGGGC
1 AAATTTGCCTGCATGTATCGATACATTGTATAGTGTATCGATACATCTGGGC
* *
164601 AAATTTGCCTGCATGTATCGATACATTTTATAATGTATCGATACATCTGGGC
1 AAATTTGCCTGCATGTATCGATACATTGTATAGTGTATCGATACATCTGGGC
**
164653 AAATTTGCCTGCATGTATCGATACAAAG-ATCAGTGTATCGATA
1 AAATTTGCCTGCATGTATCGATACATTGTAT-AGTGTATCGATA
164696 TAATGTATCG
Statistics
Matches: 138, Mismatches: 8, Indels: 2
0.93 0.05 0.01
Matches are distributed among these distances:
51 2 0.01
52 136 0.99
ACGTcount: A:0.30, C:0.17, G:0.19, T:0.35
Consensus pattern (52 bp):
AAATTTGCCTGCATGTATCGATACATTGTATAGTGTATCGATACATCTGGGC
Found at i:164788 original size:33 final size:33
Alignment explanation
Indices: 164751--164817 Score: 98
Period size: 33 Copynumber: 2.0 Consensus size: 33
164741 AGTAGCTTAA
164751 ATTGTATCGATACAAAAAAATATGTATCGATAC
1 ATTGTATCGATACAAAAAAATATGTATCGATAC
* ***
164784 ATTGTATCGATACAACACTTTATGTATCGATAC
1 ATTGTATCGATACAAAAAAATATGTATCGATAC
164817 A
1 A
164818 AATCGTTGAA
Statistics
Matches: 30, Mismatches: 4, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
33 30 1.00
ACGTcount: A:0.40, C:0.15, G:0.12, T:0.33
Consensus pattern (33 bp):
ATTGTATCGATACAAAAAAATATGTATCGATAC
Found at i:164791 original size:13 final size:13
Alignment explanation
Indices: 164773--164797 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
164763 CAAAAAAATA
164773 TGTATCGATACAT
1 TGTATCGATACAT
164786 TGTATCGATACA
1 TGTATCGATACA
164798 ACACTTTATG
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.32, C:0.16, G:0.16, T:0.36
Consensus pattern (13 bp):
TGTATCGATACAT
Found at i:165760 original size:52 final size:51
Alignment explanation
Indices: 165620--165839 Score: 204
Period size: 52 Copynumber: 4.4 Consensus size: 51
165610 GAAGATGAGA
* * * * * * * *
165620 AAAGTGATAAAGATGCCAATATGTTGATTCACGGCCAACGATATTGGGCTT
1 AAAGTGAAAAAGGTGCCAATATGCTGATTCAAGGCCAGCTACATTGGACTT
* * *
165671 AAAGCTGAGAAAAAGGATGTCAATGTGCTGATTCAAGGCCAGCTACATTGAACTT
1 AAAG-T--GAAAAAGG-TGCCAATATGCTGATTCAAGGCCAGCTACATTGGACTT
*
165726 AAAGATGAAAAAGGTGCCAATATGCTGATTCAAGGCCAGCTATATTGGAC-T
1 AAAG-TGAAAAAGGTGCCAATATGCTGATTCAAGGCCAGCTACATTGGACTT
* *
165777 ----T---AAAGGTGCCAATGTGCTGATTCAAGGTCAGCTACATTGGACTT
1 AAAGTGAAAAAGGTGCCAATATGCTGATTCAAGGCCAGCTACATTGGACTT
165821 AAAGATGAAAAAGGTGCCA
1 AAAG-TGAAAAAGGTGCCA
165840 CCGACTTGTG
Statistics
Matches: 137, Mismatches: 19, Indels: 25
0.76 0.10 0.14
Matches are distributed among these distances:
43 38 0.28
44 1 0.01
46 1 0.01
49 1 0.01
51 5 0.04
52 43 0.31
53 8 0.06
54 6 0.04
55 34 0.25
ACGTcount: A:0.35, C:0.16, G:0.24, T:0.25
Consensus pattern (51 bp):
AAAGTGAAAAAGGTGCCAATATGCTGATTCAAGGCCAGCTACATTGGACTT
Found at i:165796 original size:43 final size:43
Alignment explanation
Indices: 165735--165824 Score: 153
Period size: 43 Copynumber: 2.1 Consensus size: 43
165725 TAAAGATGAA
*
165735 AAAGGTGCCAATATGCTGATTCAAGGCCAGCTATATTGGACTT
1 AAAGGTGCCAATATGCTGATTCAAGGCCAGCTACATTGGACTT
* *
165778 AAAGGTGCCAATGTGCTGATTCAAGGTCAGCTACATTGGACTT
1 AAAGGTGCCAATATGCTGATTCAAGGCCAGCTACATTGGACTT
165821 AAAG
1 AAAG
165825 ATGAAAAAGG
Statistics
Matches: 44, Mismatches: 3, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
43 44 1.00
ACGTcount: A:0.31, C:0.18, G:0.24, T:0.27
Consensus pattern (43 bp):
AAAGGTGCCAATATGCTGATTCAAGGCCAGCTACATTGGACTT
Found at i:165869 original size:30 final size:30
Alignment explanation
Indices: 165826--166146 Score: 321
Period size: 30 Copynumber: 11.0 Consensus size: 30
165816 GACTTAAAGA
*
165826 TGAAAAA-GGTGCCACCGACTTGTGGGCTT
1 TGAAAAAGGGTGCCACTGACTTGTGGGCTT
* * *
165855 CGAAAAAGGGTGCCACTAATTTGTGGGCTT
1 TGAAAAAGGGTGCCACTGACTTGTGGGCTT
*
165885 TG---AAGGTTGCCACTGACTTGTGGGCTT
1 TGAAAAAGGGTGCCACTGACTTGTGGGCTT
* *
165912 T--TAAAGGTTGCCACTGACTTGTGGGCTTT
1 TGAAAAAGGGTGCCACTGACTTGTGGGC-TT
**
165941 TGAAAAA-TATGCCACTGACTTGTGGGCTTT
1 TGAAAAAGGGTGCCACTGACTTGTGGGC-TT
*
165971 TG-AAAAGGGTGCCACTAACTTGTGGGCTT
1 TGAAAAAGGGTGCCACTGACTTGTGGGCTT
* *
166000 T--TAAAGGTTGCCACTGACTTGTGGGCTTT
1 TGAAAAAGGGTGCCACTGACTTGTGGGC-TT
*
166029 TGAAAAAAGGGTGCCACTGATTTGTGGGCTT
1 TG-AAAAAGGGTGCCACTGACTTGTGGGCTT
*
166060 TG---AAGGTTGCCACTGACTTGTGGGCTTT
1 TGAAAAAGGGTGCCACTGACTTGTGGGC-TT
**
166088 TGAAAAA-AATGCCACTGACTTGTGGGCTT
1 TGAAAAAGGGTGCCACTGACTTGTGGGCTT
** *
166117 TGAAAAA-TATGCCACTGACTTGTGGACTT
1 TGAAAAAGGGTGCCACTGACTTGTGGGCTT
166146 T
1 T
166147 TGAAGGGTGA
Statistics
Matches: 251, Mismatches: 26, Indels: 30
0.82 0.08 0.10
Matches are distributed among these distances:
27 44 0.18
28 49 0.20
29 49 0.20
30 78 0.31
31 9 0.04
32 22 0.09
ACGTcount: A:0.23, C:0.17, G:0.28, T:0.31
Consensus pattern (30 bp):
TGAAAAAGGGTGCCACTGACTTGTGGGCTT
Found at i:166088 original size:59 final size:58
Alignment explanation
Indices: 165831--166150 Score: 393
Period size: 59 Copynumber: 5.5 Consensus size: 58
165821 AAAGATGAAA
* * * *
165831 AAGG-TGCCACCGACTTGTGGGC-TTCGAAAAAGGGTGCCACTAATTTGTGGGCTTTG
1 AAGGTTGCCACTGACTTGTGGGCTTTTGAAAAAGGGTGCCACTGACTTGTGGGCTTTG
*
165887 AAGGTTGCCACTGACTTGTGGGCTTTT---AAAGGTTGCCACTGACTTGTGGGCTTTTG
1 AAGGTTGCCACTGACTTGTGGGCTTTTGAAAAAGGGTGCCACTGACTTGTGGGC-TTTG
** * *
165943 AAAAATATGCCACTGACTTGTGGGCTTTTG-AAAAGGGTGCCACTAACTTGTGGGCTTTTA
1 -AAGGT-TGCCACTGACTTGTGGGCTTTTGAAAAAGGGTGCCACTGACTTGTGGGC-TTTG
*
166003 AAGGTTGCCACTGACTTGTGGGCTTTTGAAAAAAGGGTGCCACTGATTTGTGGGCTTTG
1 AAGGTTGCCACTGACTTGTGGGCTTTTG-AAAAAGGGTGCCACTGACTTGTGGGCTTTG
**
166062 AAGGTTGCCACTGACTTGTGGGCTTTTGAAAAA-AATGCCACTGACTTGTGGGCTTTG
1 AAGGTTGCCACTGACTTGTGGGCTTTTGAAAAAGGGTGCCACTGACTTGTGGGCTTTG
** *
166119 AAAAATATGCCACTGACTTGTGGACTTTTGAA
1 -AAGGT-TGCCACTGACTTGTGGGCTTTTGAA
166151 GGGTGATAAA
Statistics
Matches: 232, Mismatches: 21, Indels: 19
0.85 0.08 0.07
Matches are distributed among these distances:
55 21 0.09
56 8 0.03
57 41 0.18
58 55 0.24
59 58 0.25
60 49 0.21
ACGTcount: A:0.23, C:0.17, G:0.28, T:0.32
Consensus pattern (58 bp):
AAGGTTGCCACTGACTTGTGGGCTTTTGAAAAAGGGTGCCACTGACTTGTGGGCTTTG
Found at i:167607 original size:6 final size:5
Alignment explanation
Indices: 167587--167691 Score: 85
Period size: 5 Copynumber: 21.0 Consensus size: 5
167577 CCGGACGCTT
* *
167587 TTTTG TTGTTA TTGTTG TTGTT- TTTTG TTTTT TTTTG TTCTT- TTTTG
1 TTTTG TT-TTG TT-TTG TT-TTG TTTTG TTTTG TTTTG TT-TTG TTTTG
* * *
167634 TTTTG TTTTG TTTTG TTTT- TTGT- TTTTG TTTTG -TTTG TTTGTT TTTTT
1 TTTTG TTTTG TTTTG TTTTG TTTTG TTTTG TTTTG TTTTG TTT-TG TTTTG
167682 TTTTG TTTTG
1 TTTTG TTTTG
167692 GAGGACGCCG
Statistics
Matches: 85, Mismatches: 8, Indels: 14
0.79 0.07 0.13
Matches are distributed among these distances:
4 14 0.16
5 53 0.62
6 18 0.21
ACGTcount: A:0.01, C:0.01, G:0.17, T:0.81
Consensus pattern (5 bp):
TTTTG
Found at i:167618 original size:1 final size:1
Alignment explanation
Indices: 167607--167690 Score: 51
Period size: 1 Copynumber: 84.0 Consensus size: 1
167597 ATTGTTGTTG
* * * * * * * * * * *
167607 TTTTTTGTTTTTTTTTGTTCTTTTTTGTTTTGTTTTGTTTTGTTTTTTGTTTTTGTTTTGTTTGT
1 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
* *
167672 TTGTTTTTTTTTTTGTTTT
1 TTTTTTTTTTTTTTTTTTT
167691 GGAGGACGCC
Statistics
Matches: 57, Mismatches: 26, Indels: 0
0.69 0.31 0.00
Matches are distributed among these distances:
1 57 1.00
ACGTcount: A:0.00, C:0.01, G:0.14, T:0.85
Consensus pattern (1 bp):
T
Found at i:167620 original size:10 final size:10
Alignment explanation
Indices: 167585--167690 Score: 106
Period size: 10 Copynumber: 10.1 Consensus size: 10
167575 ATCCGGACGC
167585 TTTTTTGTTGT
1 TTTTTTGTT-T
* *
167596 TATTGTTGTTG
1 T-TTTTTGTTT
167607 TTTTTTGTTT
1 TTTTTTGTTT
*
167617 TTTTTTGTTC
1 TTTTTTGTTT
167627 TTTTTTGTTT
1 TTTTTTGTTT
*
167637 TGTTTTGTTTT
1 TTTTTTG-TTT
167648 GTTTTTTGTTT
1 -TTTTTTGTTT
167659 TTGTTTTGTTT
1 TT-TTTTGTTT
*
167670 GTTTGTT-TTT
1 -TTTTTTGTTT
167680 TTTTTTGTTT
1 TTTTTTGTTT
167690 T
1 T
167691 GGAGGACGCC
Statistics
Matches: 79, Mismatches: 10, Indels: 13
0.77 0.10 0.13
Matches are distributed among these distances:
9 5 0.06
10 40 0.51
11 19 0.24
12 15 0.19
ACGTcount: A:0.01, C:0.01, G:0.16, T:0.82
Consensus pattern (10 bp):
TTTTTTGTTT
Found at i:167623 original size:32 final size:30
Alignment explanation
Indices: 167585--167691 Score: 121
Period size: 30 Copynumber: 3.5 Consensus size: 30
167575 ATCCGGACGC
*
167585 TTTTTTGTTGTTATTGTTGTTGTTTTTTGTT
1 TTTTTTTTTGTT-TTGTTGTTGTTTTTTGTT
*
167616 TTTTTTTGTTCTTTT-TTGTT-TTGTTTTGTT
1 TTTTTTT-TTGTTTTGTTGTTGTT-TTTTGTT
*
167646 TTGTTTTTTGTTTTTGTT-TTGTTTGTTTGTT
1 TTTTTTTTTG-TTTTGTTGTTGTTT-TTTGTT
167677 TTTTTTTTTGTTTTG
1 TTTTTTTTTGTTTTG
167692 GAGGACGCCG
Statistics
Matches: 65, Mismatches: 5, Indels: 13
0.78 0.06 0.16
Matches are distributed among these distances:
29 4 0.06
30 30 0.46
31 27 0.42
32 4 0.06
ACGTcount: A:0.01, C:0.01, G:0.17, T:0.81
Consensus pattern (30 bp):
TTTTTTTTTGTTTTGTTGTTGTTTTTTGTT
Found at i:167631 original size:42 final size:42
Alignment explanation
Indices: 167584--167690 Score: 136
Period size: 42 Copynumber: 2.6 Consensus size: 42
167574 CATCCGGACG
167584 CTTTTTTG-TTGTTATTGTTGTTGTTTTTTGTTTTT-TTTTGTT
1 CTTTTTTGTTTGTT-TTGTT-TTGTTTTTTGTTTTTGTTTTGTT
167626 CTTTTTTGTTTTGTTTTGTTTTGTTTTTTGTTTTTGTTTTG-T
1 CTTTTTTG-TTTGTTTTGTTTTGTTTTTTGTTTTTGTTTTGTT
*
167668 -TTGTTTGTTT-TTTT-TTTTGTTTT
1 CTTTTTTGTTTGTTTTGTTTTGTTTT
167691 GGAGGACGCC
Statistics
Matches: 61, Mismatches: 1, Indels: 10
0.85 0.01 0.14
Matches are distributed among these distances:
38 9 0.15
39 4 0.07
40 3 0.05
41 6 0.10
42 24 0.39
43 10 0.16
44 5 0.08
ACGTcount: A:0.01, C:0.02, G:0.16, T:0.81
Consensus pattern (42 bp):
CTTTTTTGTTTGTTTTGTTTTGTTTTTTGTTTTTGTTTTGTT
Found at i:172021 original size:476 final size:475
Alignment explanation
Indices: 171117--250147 Score: 51061
Period size: 475 Copynumber: 165.4 Consensus size: 475
171107 CTACAGGCGC
* *
171117 CATAAACATAGTCTTCCCATAAGGATACATGATATCAATGCTTTGGTTTCGTAAGAAACGCTTTC
1 CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTTC
* ** * * * * * * *
171182 TGCCTGCCAATTTTTGAAAAGCATAA-TTCCAATCCTCAAATTAGACAAACAAGGATCCTAGTGA
66 TTCCCACCAATTTTTGAAAAGTACAAGTT-CATTCCTCAAATGAGACAAACATGGATTCTAGTAA
* * * * *
171246 GCATTTTCATTCATTTTATGGTTAGGCACTAGAAACACATTCTCCCCAATAGGATTAATGATATT
130 GGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATT
*** * *
171311 GATGGTTTTCTTTTGCCACAAAATTTTTTCTTTGTCTTATTTTCCTTAAAATCAAAGTTTGTACT
195 GATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACT
* * * * *
171376 TTAAATAAGACATGTC-TTGATTCTCATAAAAGTCTCCATTCTTTTC-AGCATTGGGAGCCAAAA
260 TTAAATGAGACAAG-CATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAG-ATTGGGAACCAAAA
* * * **
171439 ACACATTCCCTTCGTTAGGATACAAGACATTGATGCTTTGGTGTCGCAAGAGAAGCTGTTCTCCC
323 ACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTC
* * *
171504 CACCGTTATTGATAGAATCAAAGTTTGTCTCTCAAATAAGACAAACATGAATAGTCATACTAATC
388 CAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATC
* *
171569 CACTTTCTTTTTTGAATTAGGCA
453 CACTTTCTTTTCTGGATTAGGCA
* * *
171592 CAGCAAACATAGTCTTCTCATAACGATACATGATATCGATGCTTTGGTTTCGTAAGAAATGCTTT
1 CA-TAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * *
171657 CTTCCCACCAATTTTTGAGAAGTACAAGTTCATTCCCCAAATGAGACAAACATAGATTCTAGTAA
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA
* * *
171722 GGATCTTCATTCATTTCATGGTTAAGCA-TAATAAACACATTTTCCCCAACAGGATAAATGATAT
130 GGATCTTCATTCATTTCATGGTTAGGCACT-ATAAACACATTCTCCCCAATAGGATAAATGATAT
* * * *
171786 TGATGGTTTTCTTCTACGTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGCTTGTAC
194 TGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTAC
* * *
171851 TTTAAATGAGACAAGCATTGATTCTCGTAAAAGTGTCCATTCTTTCCATGATTAGGAACCAAAAA
259 TTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAA
* * *
171916 CGCAATT-CCTTCATTAGAATACATGACATTGATGCTTTGGTGTCGCAATAGAAGCTTTTCTTTC
324 CAC-ATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTC
* ** * * *
171980 AAACAATGTTTATAAAATCAAAGTTTGTCTCTTATATAAGACAAACATGAATAGTCATACTAATC
388 CAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATC
*
172045 CACTTTCTTTTCTGGATTAGGCGC
453 CACTTTCTTTTCTGGATTAGGC-A
* * *
172069 CATAAACATAGTCTTCCCATAAGGATACATGATATCAATGCTTTGGTTTCGTAAGAAATGCTTTC
1 CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTTC
* ** * * * * * * * *
172134 TGCCTGCCAATTTTTGAAAAGCATAATTTCAATCCTCAAATTAGACAAACAAGGATCCTAGTGAG
66 TTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAAG
* * * * * * *
172199 CATTTTCATTCATTTTATGGTTAGGCACTAGAAACACATTCTCCCCAATAGGATTAATCACATTG
131 GATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATTG
* *** * *
172264 ATGGTTTTCCTTTGCCACAAAATTTTTTCTTTGTCTTATTTTCCTTAAAATCAAAGTTTGTACTT
196 ATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTT
* * * * *
172329 TAAATAAGACATGTC-TTGATTCTCATAAAAGTCTCCATTCTTTTC-AGCATTGGGAGCCAAAAA
261 TAAATGAGACAAG-CATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAG-ATTGGGAACCAAAAA
* * * **
172392 CACATTCCCTTCGTTAGGATACAAGACATTGATGCTTTGGTGTCGCAAGAGAAGCTGTTCTCCCC
324 CACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
* * *
172457 ACCGTTATTGATAGAATCAAAGTTTGTCTCTCAAATAAGACAAACATGAATAGTCATACTAATCC
389 AACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCC
* *
172522 ACTTTCTTTTTTGAATTAGGCA
454 ACTTTCTTTTCTGGATTAGGCA
* * * *
172544 CAGCAAACACAGTCTTCTCATAACGATACATGATATCGATGCTTTGGTTTCGTAAGAAATGCTTT
1 CA-TAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * * *
172609 CTTCCCACCAATTTTTGAGAAGTGCAAGTTCATTCCCCAAATGAGACAAACATAGATTCTAGTAA
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA
* *
172674 GGATCTTCATTCATTTCATGGTTAAGCA-TAATAAACACATTCTCCCCAACAGGATAAATGATAT
130 GGATCTTCATTCATTTCATGGTTAGGCACT-ATAAACACATTCTCCCCAATAGGATAAATGATAT
* * * *
172738 TGATGGTTTTCTTCTACGTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGCTTGTAC
194 TGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTAC
* * *
172803 TTTAAATGAGACAAGCATTGATTCTCGTAAAAGTGTCCATTCTTTCCATGATTAGGAACCAAAAA
259 TTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAA
* * *
172868 CGCAATT-CCTTCATTAGAATACATGACATTGATGCTTTGGTGTCGCAATAGAAGCTTTTCTTTC
324 CAC-ATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTC
* ** * * *
172932 AAACAATGTTTATAAAATCAAAGTTTGTCTCTTATATAAGACAAACATGAATAGTCATACTAATC
388 CAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATC
*
172997 CACTTTCTTTTCTGGATTAGGCGC
453 CACTTTCTTTTCTGGATTAGGC-A
* *
173021 CATAAACATAGTCTTCCCATAAGGATACATGATATCAATGCTTTGGTTTCGTAAGAAACGCTTTC
1 CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTTC
* ** * * * * * * * *
173086 TGCCTGCCAATTTTTGAAAAGCATAATTTCAATCCTCAAATTAGACAAACAAGGATCCTAGTGAG
66 TTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAAG
* * * * * *
173151 CATTTTCATTCATTTTATGGTTAGGCACTAGATACACATTCTCCCCAATAGGATTAATGATATTG
131 GATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATTG
*** * *
173216 ATGGTTTTCTTTTGCCACAAAATTTTTTCTTTGTCTTATTTTCCTTAAAATCAAAGTTTGTACTT
196 ATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTT
* * * * *
173281 TAAATAAGACATGTC-TTGATTCTCATAAAAGTCTCCATTCTTTTC-AGCATTGGGAGCCAAAAA
261 TAAATGAGACAAG-CATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAG-ATTGGGAACCAAAAA
* * * **
173344 CACATTCCCTTCGTTAGGATACAAGACATTGATGCTTTGGTGTCGCAAGAGAAGCTGTTCTCCCC
324 CACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
* * * *
173409 ACCGTTATTGATAGAATCAAAGTTTGTCTCTCAAATAAGACAAACATGAATAGTTATACTAATCC
389 AACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCC
* *
173474 ACTTTCTTTTTTGAATTAGGCA
454 ACTTTCTTTTCTGGATTAGGCA
* * *
173496 CAGCAAACATAGTCTTCTCATAACGATACATGATATCGATGCTTTGGTTTCGTAAGAAATGCTTT
1 CA-TAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * *
173561 CTTCCCACCAATTTTTGAGAAGTACAAGTTCATTCCCCAAATGAGACAAACATAGATTCTAGTAA
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA
* *
173626 GGATCTTCATTCATTTCATGGTTAAGCACAATAAACACATTCTCCCCAATAGGATAAATGATATT
130 GGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATT
* *
173691 GATGGTTTTCTTTCGCCTCGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACT
195 GATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACT
* *
173756 TTAAATGAGACAAGCATAGATTCTCGAAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAAC
260 TTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAAC
* * * * *
173821 ACATTCCCTTCATTAGAATACCTGACATTGTTGCTTTCGTGTCGCAAGAGAAGCTTTTCTTTCTA
325 ACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCA
** *
173886 ATATTGTTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCA
390 ACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCA
173951 CTTTCTTTTCTGGATTAGGCA
455 CTTTCTTTTCTGGATTAGGCA
* * * * * *
173972 CCGTAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCGCAAGATATGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * ** * * * *
174037 CTTCTCACCAATTTTTGTAAAGTATGAGTTCATTGCTCAAACGAGACAAACATGGATTCTTGTAG
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA
* * * * * **
174102 GGATTTTCATTAATTTCCTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATT
130 GGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATT
* * * *
174167 GATGGTTTTCTTTTGCCTGGAAAACTTTTCTTTGCCTTATTTTCCTTAAAATTAAAGATTGCACT
195 GATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACT
* *
174232 TTAAATGAGACAAGCATAGATTCTCGTAAAAGTCTCCACTCTTTCCAAGATTGGGAACCAAAAAC
260 TTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAAC
* * **
174297 ACATTCCCCTCATTAGAATACATGACATTGATGCTTTGGTGTCGCAAGAGAAG-TTGTTCTCCCC
325 ACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTT-TTCTTTCC
* * *
174361 ACCGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACAAATCT
389 AACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCC
** *
174426 GTTTTCTTTTCTGGATTAGGTA
454 ACTTTCTTTTCTGGATTAGGCA
* ** *
174448 CCATAAACATAGTCTTCTCATATGGATACATGATATCGATGCTTTGGTTTCACAAGAAATGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * * * * * **
174513 CCTCCCACCAATTTTTGTAAA-TTCTAAGTTAATGCCTAAAACAAGACAAACATGGATTCTAGTA
65 CTTCCCACCAATTTTTGAAAAGTAC-AAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTA
* * * *
174577 AGGATCTTCATTCATTTCATGATTAGGCACTATAAATACATTCTCCTCATTAGGATAAATGATAT
129 AGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATAT
* ** * * *
174642 TGATGGTTTTTTTTTGAATGAAAATATTTTCTTTGCCTTACTTTCCTTAAAATCAAAGTTTGTAC
194 TGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTAC
* * * *
174707 TTTAAATGAAACAAGCATTAATTCTCGTAAAATTCTCCATTTTTTCCAAGATTGGGAACC-AAAA
259 TTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAA
* * * * *
174771 CATATTCCCTTCATTAGGATACATGACATTGACGCTTTGGTGTCTCAAGAGAAGCTTTTTTTTCT
324 CACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
* * * *
174836 AACGTTGTTGATAAAATC-AAGTTTGTCTCTTAAATAAGGCAAACTTGAATACTCATACTAATCC
389 AACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCC
* * * *
174900 CCATTCTTTTCAGGATTAGCCA
454 ACTTTCTTTTCTGGATTAGGCA
* * * * * *
174922 CCATAAACATAGTCTTCTGC-TACGGATACAGGATATTGATGATTTGGTTT-GCT-AGGAATGCT
1 -CATAAACATAGTCTTCT-CATAAGGATACATGATATCGATGCTTTGGTTTCG-TAAGAAACGCT
* ** * * * * * * *
174984 TTTTTCCCA-CAATTTTTCTAGA-TTCTATGTTCGTGCATCAAATGAGACAAATATGGATTCTAG
63 TTCTTCCCACCAATTTTTGAAAAGTAC-AAGTTCATTCCTCAAATGAGACAAACATGGATTCTAG
* * * * * ** *
175047 TAAGGATCATCATTCATTTCGTGATTAGGCTCTATAAACACATTCTTCTCC--TCAGGATGCACG
127 TAAGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTC-TCCCCAAT-AGGATAAATG
* * * * * *
175110 ATATTGATGGTTTTCTTTTGCTTGAAAATCTTCTCTTTGCCTCACTTTCCTTAAAATCAAAGATT
190 ATATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTT
175175 GTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCA
255 GTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCA
* * *
175240 AAAACACATTCTCTTCATTAGGATATATGACATTAATGCTTTGGTGTCGCAAGAGAAGCTTTTCT
320 AAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCT
* * * * * * *
175305 TTCCAACGTTATTGATAAAATCAAAGTTTGTCCCTCAAATAAGGCAACCTTGAATACTTATACTA
385 TTCCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTA
*
175370 ATCCACATTCTTTT-TAGGATTAGGCA
450 ATCCACTTTCTTTTCT-GGATTAGGCA
* * * * * * * * * *
175396 CCCTCAACATAGTCTTCCCATACGGATACAAGATATTGATGAC-TTAGTTTTGCAAGAAACGTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATG-CTTTGGTTTCGTAAGAAACGCTT
* * * * * *
175460 TTTTCCCACCAATTTTTGTAAA-TTCTAAGTTCATGCCTCAAATGGGACTAACATGGATTCTAGT
64 TCTTCCCACCAATTTTTGAAAAGTAC-AAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGT
* * * **
175524 AAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATA
128 AAGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATA
* * ** *
175589 TTGATGGATTTT-TTTTGCATGGAAATCTTTTCATTATCTTATTTTCCTTAAAATCAATGTTTGT
193 TTGATGG-TTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGT
* * * * * *
175653 ACCTTAAATAAGACATGCGTTGATTCTCGTAAAAGTCTCCATTCTTTTCAGGATTGGGAACCAAA
257 ACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAA
* * *
175718 AACACATTCCCTTCATTAGGATACATGACAGTGATGCTTTGGTGTCGCAAGAAAAG-TTGTTCTC
322 AACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTT-TTCTT
* * * *
175782 CCCACCGTCATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAA
386 TCCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAA
*
175847 TCCGCTTTCTTTTCT-GATTAGGCA
451 TCCACTTTCTTTTCTGGATTAGGCA
175871 CCATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * * * *
175936 CTTCCCACAAATTCTAGAAAAGTATAAGTTTATTTCC-CAAATGAGACAAACATGGATTCTAGTA
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCA-TTCCTCAAATGAGACAAACATGGATTCTAGTA
*
176000 AGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAAGAGGATAAATGATAT
129 AGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATAT
* * * * *
176065 TGATGGTTTTCTTCTACTTGGAAATCTTTTCTTTGCCTTATTTTTCTTAAAATCAAAGTTTGCAC
194 TGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTAC
* * * * * ** *
176130 TTTAAATAAGACATGCATTGACTT-TTGTAAAAGTCTCCATTTTTTTCACCATTGGGAGCCAAAA
259 TTTAAATGAGACAAGCATTGA-TTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAA
* **
176194 ACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTGTTCTCCC
323 ACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTC
* * *
176259 CACCGTCATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATC
388 CAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATC
*
176324 CGCTTTCTTTTCT-GATTAGGCA
453 CACTTTCTTTTCTGGATTAGGCA
176346 CCATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * * * * *
176411 CTTCCTACCAATTTTTGAAAAGCATAAGTTCATTCCTCAGATTAGACAAACAAGGATTCTAGTAA
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA
* *
176476 GGATCTTCATTCATTTCGTGGTTAGGCATTATAAACACATTCTCCCCAATAGGATAAATGATATT
130 GGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATT
* * * * *
176541 GACGGTTTTCTTTTGCCTGGAAATTTTTTCATTGTCTTATTTTTCTTAAAATCAAAGTTTGTACT
195 GATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACT
* * * * * * *
176606 TTAAATAAGACATGCATTGATTCTCATAAAAGTCTCCATTCTTTTCAACATTTGGAGCCAAAAAC
260 TTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAAC
* * * * **
176671 ACATTCCCTTCCTTAGGATACATGACATTGATGCTTTGGCGTTGCAAGAGAAGCTGTTCTCCCCA
325 ACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCA
* *
176736 CCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCA
390 ACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCA
176801 CTTTCTTTTCTGGATTAGGCA
455 CTTTCTTTTCTGGATTAGGCA
** *
176822 CCATAAAC--AGTCTTCTCATAAGGATACATGATATCGATGCTTCAGCTTCGTAAGAAACGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * *
176885 CTTCCCACCAATTTTTTAAAAGTATAAGTTCATTCCTCAAATAAGACAAACATGGATTCTAGTAA
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA
* *
176950 GGATCTTCGTTCATTTCGTGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATT
130 GGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATT
* * * *
177015 GATGGTTTTTTTTTACCTGGAAATCTTTTCTTGGCCTTATTTTCCATAAAATCAAAGTTTGTACT
195 GATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACT
* **
177080 TTAAATGAGACAAGCATAGATTCTCGTAAAACCCTCCATTCTTTCCAAGATTGGGAACCAAAAAC
260 TTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAAC
* * * * *
177145 ACATTCCCTTCATTAGGACACATGACATTGATACTTCGATGTCGCAAGAGAAGCTTTTCTTTCTA
325 ACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCA
* * ** * *
177210 ACGTTGTTGATAAAATCAAAGTTTATCTCTTAAATAAGGTAAACTTGAATACTCATACTAATCCA
390 ACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCA
* **
177275 -TATTCTTTT-TACGATTAACCA
455 CT-TTCTTTTCT-GGATTAGGCA
* * * * *
177296 CCATAAACATAGTGTTTTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAACACTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * * * *
177361 CTTCCCACCAATTTTTGTAAA-TTCTAAGTTCGTGCC-CTAAATGAGACAAACATGGATTCTATT
65 CTTCCCACCAATTTTTGAAAAGTAC-AAGTTCATTCCTC-AAATGAGACAAACATGGATTCTAGT
* * * * * *
177424 AGAGG-TTTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTCGGATAAATGAT
128 A-AGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGAT
* * * * ** *
177488 ATTCATGTTTTTCTTTTGCATGCAAATCTTTTCTTTGCCTTA-TTTCGATAAAATCGAAGTTTGT
192 ATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGT
* * *
177552 ACTTTAAATGAGACAAGCATTGATTCGCCTAAAAGTCTCCATTTTTTCCAAGATTGGGAACCAAA
257 ACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAA
* * *
177617 AACACATTCCCTTCATTACGATACATTACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTT
322 AACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTT
** * * * *
177682 CTGACGTTGTTGATAAAATC-AAGTTTGTCTCTTAAATAAGGCAAACTTGAATACTCATACTAAT
387 CCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAAT
* * *
177746 CCCCATTT-TTTTCAGGATTAGCCA
452 CCAC-TTTCTTTTCTGGATTAGGCA
* * * * * * * * * *
177770 CCATAAATATAGTCTTCTGATACGGATACAGGATATTGATGATTTGCTTTTGCT-AGGAACACTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCG-TAAGAAACGCTT
* * * * * * * * * *
177834 TTTTCCCA-CAATTTTTGTAGA-TTCTATGTTCGTGCCTTAAATAAGACAAACATGGACTCTAGT
64 TCTTCCCACCAATTTTTGAAAAGTAC-AAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGT
* * * * **
177897 AAGGATCATCATTCATTTCGTGATTAGGCACTATAAACACATTCTTCTCC--TCAGGATGCATGA
128 AAGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTC-TCCCCAAT-AGGATAAATGA
* * * *
177960 TATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTCAGTTTCCTTAAAATCCAAGTTTG
191 TATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTG
* *
178025 TACTTTAAATGTGATAAGCATTGATTCTCGTAAAAGTC-CCTATTCTTTCCAAGATTGGGAACCA
256 TACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCC-ATTCTTTCCAAGATTGGGAACCA
* * * *
178089 AAAACACATTCTCTTCTTTAGGGTACATGACATTGATGCTTCGGTGTCGCAAGAGAAGC-TTTCT
320 AAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCT
* * * *
178153 TTCTAACGTTGTTGATAAAATCAAAGTTTGTCTCTTAAATAAG-CTAAACTTGAATACTCATACT
385 TTCCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGAC-AAACATGAATAGTCATACT
* * **
178217 AATCCACATTCTTTTCAGGATTAACCA
449 AATCCACTTTCTTTTCTGGATTAGGCA
* * * * * * *
178244 CCGTAAACATAGTCTTTTCATAAGGGTACATGATATTGATGCTTCGGTTTCGCAAGAAACACTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * * * *
178309 CTTCCCACCAATTTTTGTAAA-TTCTAAGTTCGTGGCC-CAAATGAGACACACATGGATTCTAGT
65 CTTCCCACCAATTTTTGAAAAGTAC-AAGTTCAT-TCCTCAAATGAGACAAACATGGATTCTAGT
* * * * * ** *
178372 AGGGGTCTTCATTCATTTCATGATTAGGGACTATAAACACATTCTCCTCTTTTGGATAAATGATA
128 AAGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATA
* * * *
178437 GTGATGTTTTTCTTTT-CCATGGAAATCTTTTCTTTGCCTTA-TTTCCTTAAAATCGATGTTTGT
193 TTGATGGTTTTCTTTTGCC-TGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGT
* * * * *
178500 ACTTTACATGAGACAAGCATTGATTCGCTTAAAAGTCTCAATT-TTTCCAAGATTAGGAA-CAAA
257 ACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAA
* * *
178563 AACACATT-CCTCCATTAGGATACATTACATTGATGCTTTGGTGTTGCAAGAGAAGCTTTTCTTT
322 AACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTT
* * * * * * *
178627 CTAACGTTGTTGATAAAATC-AAGTTTGTCTCTTAATTAAGGCAAACCTGAATACTCAAACTAAT
387 CCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAAT
* * * *
178691 CCCCATTCTTTTCAGGATTAGCCA
452 CCACTTTCTTTTCTGGATTAGGCA
* * * * * * * *
178715 CCATAAACATAGTCTTCTGATATGGATACAGGATATTGACGATTTGGTTTTGGT-AGGAACGCTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGG-TTTCGTAAGAAACGCTT
* * * * * * * * *
178779 TTTTCCCA-CAATTTTTGTAGA-TTCTATGTTCGTCCCTCAAATAAGAGAAACATGGATTCTAGT
64 TCTTCCCACCAATTTTTGAAAAGTAC-AAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGT
* * * * * * *
178842 AAGGATCATCATTCATTTCGTGATTAGGCACTATAAACACATTCT-----TTTGCAT---GGA-A
128 AAGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATA
* ** * *** ***
178898 ---AT-CTTTTC-TTTG-C-------C-TTAGTGT-CCTTAAAAT-C---AAA-CTTTG----TA
193 TTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTA
* * * * *
178939 CTTTAAATGTGATAAGCATTGATTCTCGTAAAAGTTTCCTTTCTTTCCAAGATTGGGAAGCAAAA
258 CTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAA
* ** *
179004 ACACATTCTCTTCATTAGGATACATGACATTGATGCTTCAGTGTCGCAAGAGAAGCTTTTTTTTC
323 ACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTC
* ** * * * **
179069 TAACGTT-GCGAATAAAATCAAAGTTTGTCTGTTAAATAAGGCAAACTTGAATCCTCATACTAAT
388 CAACGTTATTG-ATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAAT
* ** *
179133 CCCCTTTCTTTTCAAGATTAGCCA
452 CCACTTTCTTTTCTGGATTAGGCA
* * * * * * * *
179157 CCATAAACATAGTCTTCTAACACGGATACAGGATATTGATGATTTGGTTTCGCT-AGGAATGCTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCG-TAAGAAACGCTT
* * * * * * * * *
179221 TTTTCCCA-CATTTTTTGTAGA-TTCTATGTTCGTGCCTCAAGTGAGACAAACATGGATTCTAGT
64 TCTTCCCACCAATTTTTGAAAAGTAC-AAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGT
* * * ** * * *
179284 AAAGATCTTCATTCATTTCGTGATTAGGCACTGCAAACACATTCTCCTCATTAGGATAAATGGTA
128 AAGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATA
* * * *
179349 TTGATGGTTTTCATTTGCATGGAAATCTTCTCTTTTCCTTATTTTCCTTAAAATCAAAGTTTGTA
193 TTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTA
* * * * * *
179414 CTTTAAATGAGATAAGCATTGATTCTCATAAAAGTTTACATTCTTTCTAAGATTAGGAACCAAAA
258 CTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAA
* * * *
179479 ACACATTCCCTTCATTAGGATACATGACATTGATGCTTTTGCT-TTGCAGGAGAAGCTTTTCTTC
323 ACACATTCCCTTCATTAGGATACATGACATTGATGC-TTTGGTGTCGCAAGAGAAGCTTTTCTTT
* * * * * * *
179543 CCACCGTTAATGATAAAATCAAAATTTGTCCCTTAAAGAAGAGAAACATGAATACTCATACTAAT
387 CCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAA-
* *
179608 TCC-CATTCTTTT-TAGGACTAGGCA
451 TCCACTTTCTTTTCT-GGATTAGGCA
* * * * * * ** * * *
179632 CCCTAAACATAGTCTTCTCTTACGGATACAAGATATTGATGATTTACTTTCGCAAGAAATGTTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * * * * * *
179697 TTTCCCACCAATTTTTGTAAA-TTCTAAGTTCGTGCCTCAAATGAGAAAAACATAGATTCTAGTA
65 CTTCCCACCAATTTTTGAAAAGTAC-AAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTA
* * * * * * * * *
179761 AGGATCTTCATTCACTTCGTGATTTGGCACTGTAAACACATTCTCCTCATTAGGAGAAAAGATAT
129 AGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATAT
* * * * * *
179826 TGATGGTTTTC-TTTGCATGGAAATCTTTTCTTTACCTCATTTTTCGTAAAATCAAAGTTAGTAC
194 TGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTAC
*
179890 TTTAAATGAGACAAACATTGATTCTCGTAATAA-TCTCCATTCTTTCCAAGATTGGGAACCAAAA
259 TTTAAATGAGACAAGCATTGATTCTCGTAA-AAGTCTCCATTCTTTCCAAGATTGGGAACCAAAA
* * * * *
179954 ACACATTCTCTTCATTAGGATGCATGACATTGATGCTTTTGCT-TTGCAAGAGAAGCTTGTCTTT
323 ACACATTCCCTTCATTAGGATACATGACATTGATGC-TTTGGTGTCGCAAGAGAAGCTTTTCTTT
* * * * * *
180018 CCACCGTTAATGATAAAATCAAAATTTGTCCCTTAAATAAGAGAAACATGAATACTCATACTAAT
387 CCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAA-
* *
180083 TCC-CATTCTTTT-TAGAATTAGGCA
451 TCCACTTTCTTTTCT-GGATTAGGCA
* * * * * * * *
180107 CCCTAAACATAGTCTTCTCTTACA-GATACAAGATATTGATGATTTAGTTTCGCAAGAAACGTTT
1 -CATAAACATAGTCTTCTCATA-AGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTT
* * * * * * * *
180171 TTTTCCCACCAATTTTTGTAAA-TTCTAAGTTCGTGCCTCAAATAAGACAAACATAGATTCTAAT
64 TCTTCCCACCAATTTTTGAAAAGTAC-AAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGT
* * * * *
180235 AAGGATCTTTATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATA
128 AAGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATA
* * * *
180300 TTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTACCTTATTTTTCGTAAAATCAAAGTTTGTA
193 TTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTA
* * ** * * *
180365 CTTTAAATGAGACATGCATTTATTCTTATAAAAGTCTCCATTCTTTCTAACATTGGGAACCAAGA
258 CTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAA
* * ** *** * *
180430 ACACATTCCCTTTATTAGGATACATGACATTGA-----TAGAATCG-AAGTTTATCTATTACATA
323 ACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCT-TTTC-T-
** * * * * * ** * *
180489 AGACAAACATGAATACTCATACTAATTCTCA-TTCTTTACTAGATTAGGCACCATAA-ACAAATT
385 -TTCCAAC--G-TTATTGATA--AAATCAAAGTT-TGT-CT--CTTA---A--ATAAGACAAA--
* * * * ** * **
180552 CCTCTAATAAG-GATACATGAT--A-TTGATGCTT-TGG-TTTCGCA
433 CAT-GAAT-AGTCATAC-TAATCCACTTTCT-TTTCTGGATTAGGCA
* * * * * * * * ** *** **
180593 -AAAAACACT-TTCTTCCCACCAATTTTTGTTA-ATTCAAATTTCG-TGCCCTAAATGAGATAAG
1 CATAAACA-TAGTCTTCTCA-TAA----GGATACA-T--GATATCGATGCTTTGGTTTCG-TAAG
* ** *** * * * * ***
180654 CAA-GGATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTC--
56 AAACGCTTTCT--T-CCCA-C--CA---ATTT-TTGA--A--AAGTACAAGTTCA-T-TCCTCAA
* * * * ** * * ** * **
180716 ATTAGGATAAAC---GATAT-T-G-ATGG--CTT-TTTTTTTTGCGTGG-AAATCTTTTCT-TTG
105 ATGA-GACAAACATGGAT-TCTAGTAAGGATCTTCATTCATTT-CATGGTTAGGC---ACTATAA
* ** * ** * * ** * ***
180770 CCTTATTTTCCTTAA-A--ATCAAAGTTTATACTTTAAATGAGACATGCGTTGATT-CTCACAAA
164 ACACATTCTCCCCAATAGGAT-AAA--TGATA--TT-GATG-G-TTTTC-TT--TTGC-CTGGAA
* * *** ** * * * * *
180831 AGTCTCCATTCTTTTCAAGATTGGGAACC--AAAATCACA-TTCCT-TTCATTAGGATACATGAC
217 A-TCT--TTTCTTTGCCTTATT---TTCCTTAAAATCAAAGTT--TGTACTTTA-AAT-GA-GAC
* * * * * * * * * * * * *
180892 ATTGATGCTTTGGTGTCGCAATAGAAG-CT--TTTCATTCCACCG-TTGTTG-A-TAGAATCAAA
271 A---A-GCATTGAT-TCTC-GTAAAAGTCTCCATTCTTTCCA-AGATTG-GGAACCAAAAACACA
** * * * * * * ** **
180951 GTTGTC-TC-TTAAG-TA-A-GACA--AATG---TGAAT-ACTCATACTA-ATCCCCATTCTTT-
328 -TTCCCTTCATTAGGATACATGACATTGATGCTTTG-GTGTCGCA-A-GAGA-AGCTTTTCTTTC
** * * * * * ** * *
181003 TTAGGATTA-GGCACCATAAA-CATAGTCT-TCT-TATAAGGATACATGATCTTGATGCTTTGGT
388 CAACG-TTATTG-A-TA-AAATCAAAGTTTGTCTCT-TAA--ATA-A-GA-C---AAAC-AT-GA
* * * ** * * *
181064 TTCGTAGGATAAGCTTTTTTCTCACCAATTT-TTGTAAAGTATGAGTTTACTGCTCA
438 ATAGT--CAT-A-C--TAATC-CA-C--TTTCTT-T----TCTG-GATTA--G-GCA
* ** ** ** * * * * * ** *
181120 AATGAGACAAACA-AGGATTCTTGTTGGGATCTTCATTCATTTCG-TGATTAGG-CAC-T-ATAA
1 CAT-----AAACATAGTCTTCTCATAAGGA--TACA-TGATATCGATGCTTTGGTTTCGTAAGAA
* * * *** *** * ** ** * *** *
181180 ACACATTCTTCTCTTTAGGATAAATGATATTTA-TGGTT--TTCTTTTGCATGA-A-AATC-T--
58 ACGCTTTCTTCCCACCA--ATTTTTGAAAAGTACAAGTTCATTC-CTCAAATGAGACAAACATGG
* * *** * * * ** ** * * * * * ** *
181237 TTTCTTTGT-CTTATTTTCCTTAAAATCAAAGTT-TGTACTTTAAATGAGACATGCAT--TGATT
120 ATTC-TAGTAAGGATCTTCATTCATTTCATGGTTAGGCACTAT-AA--ACACATTC-TCCCCAAT
** * * ** ** ** ** * * * * * **
181298 CTCG-TAAAAG-TCTCCATTCTTTTCAACATTGGGAACC-AAAAACACATTCCCTT-CATTAGGA
180 -AGGATAAATGATATTGATGGTTTT---C-TTTTG--CCTGGAAA-TCTTTTCTTTGCCTTA-TT
* * * ** * * ** * *** * *
181359 TACATT-ACATTGATGCTTTGGT-GTCGCAAGA-GAGGCTTTTC-TTCCCAACATTATCGATAAA
236 TTCCTTAAAATCAAAG-TTT-GTACT-TTAA-ATGAGAC-AAGCATT-----GATTCTCG-TAAA
*** ** * * * ** *
181420 A-TCAAAATTTGTCTCTTAAATAAGACAAAGTT-GAATACTCATACTAATCCCATTCTTTTTAGG
290 AGTCTCCA--T-TCT-TT--CCAAG----A-TTGGGA-AC-CA-A--AAACACATTC-CCTT--C
* * * * * * * * * * ****
181483 ATTAGGCA-CCATTAACATAGTCTTCTTATATGGATATAGGATATTGATGAATTGGTTTCCCAAG
336 ATTAGG-ATACA-TGACATTG-ATGC-T-T-TGG-TGTCGCA-A--GA-GAA--GCTTTTCTTTC
* * * * * * *
181547 AAACGGTTTTTCCCATAATTTTTGTAGATTCTAAGTTTGTGC-CTCAAATGAGACAAACATGGAT
388 CAAC-GTTATT--GATAA-------A-A-TCAAAGTTTGT-CTCTTAAATAAGACAAACATGAAT
* ** * *
181611 --TC-TAGTAAGGATCTGCATTCATTTC-GTGATTAGGCA
440 AGTCATACT-A--ATCCACTTTCTTTTCTG-GATTAGGCA
* * * * * * ** * *
181647 CTATAAACACA-TACTCCTCATTAGGATAAATGATATTGATGGTTCTCTTTTGCATTAA-AATC-
1 C-ATAAACATAGT-CTTCTCATAAGGATACATGATATCGATGCTT-TGGTTT-C-GTAAGAAACG
* ** * * ** * * * ** *
181709 TTTTCTT-TGACTC-GTTTTCCTTAAAA-T-CAAAGTTTGTACTTTAAATGAGACATGCATTGAT
61 CTTTCTTCCCAC-CAATTTT--TGAAAAGTAC-AAGTTCATTCCTCAAATGAGACAAACATGGAT
** * * * * * * * * * * ** * *
181770 TCCCGTAA-AAGTCTCCACTCTTTTCAAGATTGGGAACCAAAAATGCATTC-CCTTCATTAGGAT
122 TCTAGTAAGGA-TCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCC-CCAATAGGAT
* * ** ** * * ** * * * ** ** *
181833 ACATGACATTGATGCCTTAGTGTCG-CAAGAGAAGCTGTTC-TTCCCACCATTATT-GATAGAAT
185 AAATGATATTGATGGTTTTCTTTTGCCTGGA-AATCTTTTCTTTGCC-TTATT-TTCCTTAAAAT
* * ** * * * * * **
181895 CAAAGTTTGT-CTCTTAAATAAGACAAACA-TGAATAGTCATACTAA-TC-CACTTTTTTTTCTG
247 CAAAGTTTGTACT-TTAAATGAGACAAGCATTG-ATTCTCGTA-AAAGTCTC-CATTCTTTCCAA
* * * ** * * * * * *
181956 GATTAGGCACC-ATAA-ACATTGTCTTCTTATAAGGACACATGATATCGATGCTTTGGTTTCGTA
308 GATTGGGAACCAAAAACACATTCCCTTC--ATTAGGATACATGACATTGATGCTTTGGTGTCGCA
* * * * * * * ** *
182019 AGA-AACGC-TTTCTTCCCACCAATTTTTGA-AAAGTAAAAGCTCAT-TCTTCAAATGAGACAAA
371 AGAGAA-GCTTTTCTTTCCAAC-GTTATTGATAAAATCAAAGTTTGTCTCTT-AAATAAGACAAA
* * ** * *
182080 CATGGAT--TC-TAGTAAGGATCTTCATTCATTTCGTGG-TTAGGCA
433 CATGAATAGTCATACT-A--ATCCACTTTCTTTTC-TGGATTAGGCA
* * * * * * * ** *
182123 CTATAAACACATTCTCCCCA-ATAGGATAAATGATATTGATGGTTT--TCTTCTGCTTGGAAATG
1 C-ATAAACATAGTCTTCTCATA-AGGATACATGATATCGATGCTTTGGT-TTC-G-TAAGAAACG
* ** ** * * * * * * **
182185 TTTTCTTTGC-CTTATTTTCCTTAAAA-T-CAAAGCTT-GTACTTTAAATGAGACAAGCATTAAT
61 CTTTCTTCCCACCAATTTT--TGAAAAGTAC-AAG-TTCATTCCTCAAATGAGACAAACATGGAT
* * * * * * * * ** * *
182246 TCTCGTAA-AAGTCTCCATTC-TTTCCATGATTAGGAACCAAAAACGCAATTC-CTTCATTAGAA
122 TCTAGTAAGGA-TCTTCATTCATTT-CATGGTTAGGCACTATAAACAC-ATTCTCCCCAATAGGA
* * * ** * * * * * * * **
182308 TACATGACATTGATGCTTTGGTGTCGCAATAG-AAGCTTTTCTTT--CTAACCATGTT-GATAAA
184 TAAATGATATTGATGGTTTTCTTTTGC-CTGGAAATCTTTTCTTTGCCT---TATTTTCCTTAAA
* * * * * * * * * * * *
182369 ATCAAAGTTTGT-CTCTTATATAAGACAAAC-TTGA--GTAGTCACACTAATCCATTTTTTTTCT
245 ATCAAAGTTTGTACT-TTAAATGAGACAAGCATTGATTCTCGTAAAAGT-CTCCA-TTCTTTCCA
* ** * * * * * * * * * *
182430 AGATTAGGCGCCATAAACATAGT--CTTCGCATAAGGATACATGATATCGATGTTTTGGTTTTGT
307 AGATTGGGAACCAAAAACACATTCCCTT--CATTAGGATACATGACATTGATGCTTTGGTGTCGC
* ** * * * *
182493 AAGA-AATGC-TTTCTTCCCACAAATTTTTG--AAAAGCATAAGTTCAT-TC-CTCAAATTAGAC
370 AAGAGAA-GCTTTTCTTTCCA-ACGTTATTGATAAAATCA-AAGTT--TGTCTCTTAAATAAGAC
* * * ** *
182552 AAACAAGGAT--TC-TAGTAA-GGATTTTCATTCATTTCGTGG-TTAGGCA
430 AAACATGAATAGTCATACTAATCCACTTTC--T--TTTC-TGGATTAGGCA
* * * * * * ** * * **
182598 CTATAAACACATTCTCCCCA-ATAGGAT-CAATGATATTGATGGTTTTTTTATGCCT-GGAAATT
1 C-ATAAACATAGTCTTCTCATA-AGGATAC-ATGATATCGATGCTTTGGTT-T-CGTAAGAAACG
* *** ** ** * * * * * * *
182660 TTTTCTT-TGTCTTATGTTCCTT-AAAA-T-CAAAGTTTGTACATTAAATAAGACATATATTGAT
61 CTTTCTTCCCACCAAT-TT--TTGAAAAGTAC-AAGTTCATTCCTCAAATGAGACAAACATGGAT
* * * * *** * * * ** ** *
182721 TCTCGTAA-AAGTCTCCATTCTTTTCAACATT-GGGAGCCAAAAACACATTGC-CTTCGTTTGGA
122 TCTAGTAAGGA-TCTTCATTCATTTCATGGTTAGGCA-CTATAAACACATT-CTCCCCAATAGGA
* * * * ** * * ** * ** * ** *
182783 TACATGACATTGGTGCTTTGGTGTCG-CAAGAGAAGCTGTTCTCCCTACCGTTA--TT-GATAGA
184 TAAATGATATTGATGGTTTTCTTTTGCCTGGA-AATCT-TT-TCTTTGCC-TTATTTTCCTTAAA
* * * ** * * *
182844 ATCAAAGTTTGT-CTCTTAAATAAGACAAACA-AGAATAGTCATACTAA---TCCATTTTCTTTT
245 ATCAAAGTTTGTACT-TTAAATGAGACAAGCATTG-ATTCTCGTA-AAAGTCTCCA--TTCTTTC
*** * * * * * * * *
182904 TTGGATTAGGCACC-ATAA-ACATTGCCTTTTCATAAGGATACATGATATCGATGCTTTGGTTTC
305 CAAGATTGGGAACCAAAAACACATT-CC-CTTCATTAGGATACATGACATTGATGCTTTGGTGTC
* * * * * ** **
182967 GTAAGA-AACGC-TTTCTTCCCACCAATTTTTGA-AACGT-ATAAGTTCAT-TC-CCCAAATAAG
368 GCAAGAGAA-GCTTTTCTTTCCAAC-GTTATTGATAAAATCA-AAGTT--TGTCTCTTAAATAAG
* * ** * * *
183026 ACAAACGTGGAT--TC-TAGAAAGGATCTTCA-TTT-ATTTC-GTGCTTCGGCA
428 ACAAACATGAATAGTCATA-CTA--ATC--CACTTTCTTTTCTG-GATTAGGCA
* * * * * * * * ** *
183074 CTATAAACACATTCTCCCCAATAA-TATAAATGATATTGATGGTTTTCTTTTGCCTAA-AAATC-
1 C-ATAAACATAGTCTTCTC-ATAAGGATACATGATATCGAT-GCTTTGGTTT-CGTAAGAAA-CG
* ** ** * * *
183136 TTTTCTTTGC-CTTATTTTCCTTAAAA-T-CAACGATTGCACTT--T-AAATGAGACAAGCATAG
61 CTTTCTTCCCACCAATTTT--TGAAAAGTACAA-G-TT-CA-TTCCTCAAATGAGACAAACATGG
* * * * * * * * * * * *
183195 ATTCTCGTAA-AAGTCTCCACTC-TTTCCAAGATTGGGAACCAAAAACACATTC-CCTTCATTAG
120 ATTCTAGTAAGGA-TCTTCATTCATTT-CATGGTTAGGCACTATAAACACATTCTCC-CCAATAG
* * * * ** ** ** ** ** ** **** *
183257 AATACATGACATTGATGAATAGTCATAAT-AATCCACTTTCTTTTC--TGGATTAGGCACCAT-A
182 GATAAATGATATTGATG-GTTTTC-TTTTGCCTGGA-AATCTTTTCTTTGCCTTATTTTCCTTAA
* * * * * * * * * * * *
183318 AA-CATAG--TGTTCTCATAAGGATACATGATCTTGATGCTTTGGTTC-CGCAAGA-TATGCTTT
244 AATCAAAGTTTGTACT-TTAA--AT-GA-GA-C---AAGCATTGATTCTCGTAAAAGTCTCCATT
** * * ** ** * ** * * * * *
183378 CTTCTCACCAATTTTTGTAA--AGTATGA-GTTCGTTGCTCA-AATGAGACA-AACATGGAT--T
300 CTT-T--CCAAGATTGGGAACCAAAAACACATTCCCT--TCATTAGGATACATGACATTGATGCT
* * * * * * * *
183436 CT--TGT----AG-GGATCTTCATTAATTTCC--TGATTA-GGCACTATAAA-CACA-TTCT-CC
360 TTGGTGTCGCAAGAGAAGCTT--TT-CTTTCCAACG-TTATTG-A-TA-AAATCAAAGTT-TGTC
* * * ** * * * ** * **
183488 TCCTTACGATAA-A-AGATATTTATGGT-TTTCTTTTGCA-TTGAAATCTTTTCTTTGTCTTATT
417 T-CTTA-AATAAGACAAACATGAATAGTCATACTAATCCACTT----TCTTTTC--TGGATTA--
**
183549 TTC-
472 GGCA
* * * * * * * * *
183552 CTTAAAATCAAAGT-TTGT-ACT----TTAAATGAGA-C-ATGCGTTGATTCTCGTAA-AAGTCT
1 CAT-AAA-CATAGTCTTCTCA-TAAGGATACATGATATCGATGCTTTGGTT-TCGTAAGAA-AC-
* * ** ** ** * * * * * * *
183608 CCATTCTTTTCA--AGA-TTGGGAACCAAAAACACGTTGCCTTCAT--TAGGATACAAGACATTG
60 GCTTTCTTCCCACCA-ATTTTTGAA--AAGTACAAGTT-CATTCCTCAAATGAGACAA-ACATGG
* * * * *** * ** * * * *
183668 ATGCT--T-TGG-TGTCGCAAGAGAAGCTT--TGGTTTCGTA--AGAAACGCTTTCTTCCCACCA
120 ATTCTAGTAAGGATCT-TC-A-TTCA-TTTCATGGTTAGGCACTATAAACACATTC-T-CC-CCA
** * * **** *
183725 ATTTTTG-TAACGCATAAGTTCATTCCCTAAATGAGACAAACATTGATT--CTAGAAAGGATCTT
178 A--TAGGATAA---AT--GAT-A-T---T-GATG-G-TTTTC-TT--TTGCCT-GGAA--ATCTT
* ** *** ** * * * *** * *
183787 CATTCATTT-CGTGGTTAGGCACAATAAACACA-TTCTCCCCAATAGGATAAATGATATTGAAGG
222 --TTC-TTTGCCTTATTTTCCTTAA-AATCAAAGTT-T-----GTACTTTAAATGAGA--CAA-G
** ** * * * * ** ** * ***
183850 TTTTCTTTGGCTTGGAAAA--CT--TTTATTTGCC-TTATT---TTCCTTAAAATCA-ATGTTTG
274 CATTGATT--CTCGTAAAAGTCTCCATTCTTT-CCAAGATTGGGAACC--AAAAACACAT-TCCC
* * * * * * * * * *** ** *
183906 TACTTTA-AATA-A-GGC----ATGCGTTGATTCTCGTAAAAGTCTCCATTCTTTTCAA-G--AT
333 TTCATTAGGATACATGACATTGATGCTTTG-GTGTCGCAAGAGAAGCTTTTCTTTCCAACGTTAT
* * * ** ** *** ** * ** **
183961 TGGGAACCAAAAACACA--TTCCCTTCATTAGGGTACATGACATTGATGCTTTGGTGTCGCAAGA
397 T--G-A-TAAAATCAAAGTTTGTC-TC-TTA-AATA-A-GACAAACATG-AAT--AGTCATACTA
** ** **** * **
184024 GAAGCGGTTGTCGCCAC-CG-TTA-TTA
450 -ATCCACTT-TCTTTTCTGGATTAGGCA
* * * * * ** * * ** *
184049 -ATAAAATCAAAGTTTATCTCTTAA--ATA-A-GACAAAC-ATG-AATAG--TCATACTAATCCG
1 CAT-AAA-CATAGTCT-TCTCATAAGGATACATGA-TATCGATGCTTTGGTTTCGTAAGAA-ACG
** *** ** * *
184105 CTTTCTTTTC-TGGA-TTAGGCACCATAA--ACATAG-TC-TT-CTCATATGGATACATGATATC
61 CTTTCTTCCCACCAATTTTTG-A--A-AAGTACA-AGTTCATTCCTCAAAT-GAGACA--A-A-C
* * * * * **** ** ** * * ** *
184163 GATGCTTTGGTT-TCGCAAGAAACTTTC-TTCCCACCAATTTTTCA-AAATTCTAAGTTA-ATGC
116 -ATG----GATTCTAGTAAGGATC-TTCATTCATTTC-ATGGTT-AGGCACTATAA-ACACATTC
* * * * * * ** **
184224 -CTCAAAT-GAGATAAACATGGAT-TCTAGTAAGGATCTTCATTCATTTCAT-GATTAGGC-ACT
172 TCCCCAATAG-GAT-AA-AT-GATAT-T-G-ATGG-TTTTC-TT--TTGCCTGGA--AATCTTTT
* *** * ** * ** * * * *
184284 ATAAACACATTCTCCTCATTAGGATAAATGATGTTGATGGTTTTCTTTTGAATGA-A-AA-TATT
224 CTTTGC-C-TTATTTTCCTTAAAATCAA--A-GTT--T-G--TAC-TTTAAATGAGACAAGCATT
* **** * * * *** * * * **
184346 --TTCTTTGCCTTATTTTCCTTTAAATCAAAG-TT-TGTACTTCAAATGAAACAAGCATT-AATT
278 GATTC-TCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAAC--C-AA--AAAC-A-CATTCCCTT
** * * ** * * * * * *
184406 C-TCGTAAAATTC-T-CCATTTTTTCCAATATTGG-GAAC-CAA-A-AACACATTCCCTT-C-A-
335 CAT--TAGGATACATGACA-TTGATGC--T-TTGGTG-TCGCAAGAGAA-GCTTTTCTTTCCAAC
* ** * * * * ***** * * *
184461 -TTA-GGATACATGACATTGACGCTTTGGTGTCTCAAGAGAAG-CTTTTTTTTCTAATGTTGTTG
392 GTTATTGATA-A--A-ATCAAAG-TTT-GTCTCTTAA-ATAAGAC--AAACAT-GAA--TAG-TC
* * * * ** *
184523 ATA-GAATCAAGTTTCTCTCTTAAATACGGCAAACTTGAATACT
444 ATACTAATCCACTTTCT-T-TT--CT--GG---A-TT--AGGCA
** * * * * *
184566 CATACTAATCCCCATTCTTTTCAAGTTTGTCTTCTGCTACGGATATAGGATATTGATGATTTGGT
1 CATA--AA----CA------T--A----GTCTTCTCATAAGGATACATGATATCGATGCTTTGGT
* * * * * * * ***
184631 TT-GCT-AGGAACGCTTAT-TTCCCA-CAATTTTTGTAGA-TTCTATGTTCGTGCAAAAAATGAG
48 TTCG-TAAGAAACGCTT-TCTTCCCACCAATTTTTGAAAAGTAC-AAGTTCATTCCTCAAATGAG
* * * **
184691 ACAAATATGGATTCTAGTAAGGATCATCATTCATTTCATGATTAGGCTTTATAAACACATTCTTC
110 ACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTC-TC
* ** * * * * * *
184756 TCC--TCAGGATGCATGATACTGATGGTTTTCTTTTGCTTGAAAATCTTCTCTTTGCCTCACTTT
174 CCCAAT-AGGATAAATGATATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTT
* * * * *
184819 CCTAAAAATAAAAGATTGTACTTTAAATGAGACAAGCATTGATTATCGTAAAACTCTCCATTCTT
238 CCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTT
* * * * *
184884 TCCAGGATTGGGAACCAAAAACATATTCCCTTCATTAGGATATATGAAATTAATGCTTTGGTGTC
303 TCCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTC
* * *
184949 GCAAGAGAAGCTTTTCTTTCCAACGTTATTGGTAAAATCAAAGTTTGTCTCTTAAATACGGCAAA
368 GCAAGAGAAGCTTTTCTTTCCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAA
* * * * * *
185014 CTTGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGCCA
433 CATGAATAGTCATACTAATCCACTTTCTTTTCTGGATTAGGCA
* * * * * *** * *
185057 CCATAAACATAGTCTTCTAATACGGATATAGGATATTGACAATTTGGTTTCGCT-AGGAACGTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCG-TAAGAAACGCTT
* * * * * * * * *
185121 TTTTCCCA-CAATTTTTGTAGA-TTCTATGTTCGTGCCTCAAATGAGACAAATATGGATTCTGGT
64 TCTTCCCACCAATTTTTGAAAAGTAC-AAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGT
* * * * * * ***
185184 GAGGATCATCATTCATTTCGTGATTAGGCTCTATAAACACATTCTTCTCC--TCAGGATGCTTGA
128 AAGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTC-TCCCCAAT-AGGATAAATGA
* * * * * * *
185247 TATTGATGGTTTTCTGTTGCTTGAAAATCTTCTCTTTGCCTCACTTTCCTTAAAATCAAAGATTG
191 TATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTG
* * *
185312 TACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCACTCTTTCCATGATTAGGAACCAA
256 TACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAA
* * * *
185377 AAACGCAATT-CCTTCATTAGAATACATGACATTGATGCTTTGGTGTCGCAATATAAGCTTTTCT
321 AAACAC-ATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCT
* ** * * * * * *
185441 TTCTAACAATGTTGATAAAATCAAAATTTGTCTCTTATATAAGGCAAACTTGAATAGTTATACTA
385 TTCCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTA
**
185506 ATCCACATTT-TTTT-AAGATTAGGCA
450 ATCCAC-TTTCTTTTCTGGATTAGGCA
* * * * * * *
185531 CCCTAAACATAGTCTTCTCATATGGATACAAGATATTGATGATTTAGTTAT-GCAAGAAACGCTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTT-TCGTAAGAAACGCTT
* * * * * * *
185595 TTTTCCCACCAATTTTTGTAGA-TTCTAAGTTCATGCCCCAAATGGGACAAACATGGATTCTAGT
64 TCTTCCCACCAATTTTTGAAAAGTAC-AAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGT
* * * **
185659 AAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTTCTCC--TCAGGATGCATGA
128 AAGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTC-TCCCCAAT-AGGATAAATGA
** * ** * * *
185722 TATTGATGGTTTTCTTTTGTGTGAAAATCTTTTCTTTTTCTCACTTTCCTTAAAATCAAAGATTG
191 TATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTG
* * *
185787 TACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAACATTGGGAACCAA
256 TACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAA
* * * ** * *
185852 AAACACATTCCCTTCGTTAGGGTACATTATGTTGATGCTTTGGTGTCGCAAGAGAGGTTTTTCTT
321 AAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTT
* ** * * * ** *
185917 CCCAGTGTTATCGATAAAATGGAAA-TTTGTCTCTTAAATAAG--AGAGTTGAATACTCATACTA
386 TCCAACGTTATTGATAAAAT-CAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTA
*
185979 ATCC-CATTCTTTT-TAGGATTAGGCA
450 ATCCACTTTCTTTTCT-GGATTAGGCA
* * * ** ** *
186004 CAATTAACATAGTCTTCTCATATGGATACAGGATAGT-GATGAATTGGTTTCACAAGAAATGCTT
1 C-ATAAACATAGTCTTCTCATAAGGATACATGATA-TCGATGCTTTGGTTTCGTAAGAAACGCTT
* * * * * * *
186068 TTTTCCCA-TAATTTTTGTAAA-TTCAATGTTCGTGCCTCAAATGAGACAAACATGGATTCTACT
64 TCTTCCCACCAATTTTTGAAAAGTACAA-GTTCATTCCTCAAATGAGACAAACATGGATTCTAGT
* ** ** * *
186131 AAGGATCTTCATTCATTTCGTGACTAGGCACTATAAACACATAGTCCTCATTAGGATAAATGATA
128 AAGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATA
* * * * *
186196 TTGATGGTTTTCTTTCGCATGAAAATCTTTTCTTTGAGC-TGTTTTCCTTAAAATCAAAGTTTGT
193 TTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTG-CCTTATTTTCCTTAAAATCAAAGTTTGT
* * *
186260 ACTTTAAATGAGACATGCATTGATTCCCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAA
257 ACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAA
* **
186325 AACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTGTTCTCC
322 AACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTT
* * * *
186390 CCACCGTTGTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATTAATAGTCATACTAAT
387 CCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAAT
* * *
186455 TCACATTCTTTTCTAGATTAGGCA
452 CCACTTTCTTTTCTGGATTAGGCA
* *
186479 CCATAAACATAGTTTTCTCATAAGGATACATGATATCGATGCTTTGGTTTTGTAAGAAACGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * *
186544 CTTCCCACCAATTTTTTAAAAGTATAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTTA
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA
* *
186609 GGATCTTCATTCATTTCTTAGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATT
130 GGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATT
* * * * * *
186674 GAAGGTTTTCTTTGGCTTGGAAAACTTTTATTTGCCTTATTTTCCTTAAAATCAATGTTTGTACT
195 GATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACT
* * * * *
186739 TTAAATAAGGCATGCGTTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAAC
260 TTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAAC
* ** * **
186804 ACATTCCCTTCATTAGGGTACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCGGTTGTCGCCA
325 ACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCA
* * * *
186869 CCGTTATTAATAAAATCAAAGTTTATCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCG
390 ACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCA
186934 CTTTCTTTTCTGGATTAGGCA
455 CTTTCTTTTCTGGATTAGGCA
* *
186955 CCATAAACATAGTCTTCTCATATGGATACATGATATCGATGCTTTGGTTTCGCAAGAAA--CTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * * * *
187018 CTTCCCACCAATTTTTCAAAA-TTCTAAGTTAATGCCTCAAATGAGATAAACATGGATTCTAGTA
65 CTTCCCACCAATTTTTGAAAAGTAC-AAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTA
* * * *
187082 AGGATCTTCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATGT
129 AGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATAT
** * * *
187147 TGATGGTTTTCTTTTGAATGAAAATATTTTCTTTGCCTTATTTTCCTTTAAATCAAAGTTTGTAC
194 TGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTAC
* * * * * *
187212 TTCAAATGAAACAAGCATTAATTCTCGTAAAATTCTCCATTTTTTCCAATATTGGGAACCAAAAA
259 TTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAA
* * * *
187277 CACATTCCCTTCATTAGGATACATGACATTGACGCTTTGGTGTCTCAAGAGAAGCTTTTTTTTCT
324 CACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
* * * * * * * *
187342 AATGTTGTTGATAGAATC-AAGTTTCTCTCTTAAATACGGCAAACTTGAATACTCATACTAATCC
389 AACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCC
* *
187406 CCATTCTTTTC---A--A-G--
454 ACTTTCTTTTCTGGATTAGGCA
* * * * * * *
187420 --T-----TTGTCTTCTGC-TACGGATATAGGATATTGATGATTTGGTTT-GCT-AGGAACGCTT
1 CATAAACATAGTCTTCT-CATAAGGATACATGATATCGATGCTTTGGTTTCG-TAAGAAACGCTT
* * * * * * *** *
187475 AT-TTCCCA-CAATTTTTGTAGA-TTCTATGTTCGTGCAAAAAATGAGACAAATATGGATTCTAG
64 -TCTTCCCACCAATTTTTGAAAAGTAC-AAGTTCATTCCTCAAATGAGACAAACATGGATTCTAG
* * ** * **
187537 TAAGGATCATCATTCATTTCATGATTAGGCTTTATAAACACATTCTTCTCC--TCAGGATGCATG
127 TAAGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTC-TCCCCAAT-AGGATAAATG
* * * * * * * * *
187600 ATACTGATGGTTTTCTTTTGCTTGAAAATCTTCTCTTTGCCTCACTTTCCTAAAAATAAAAGATT
190 ATATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTT
* * *
187665 GTACTTTAAATGAGACAAGCATTGATTATCGTAAAACTCTCCATTCTTTCCAGGATTGGGAACCA
255 GTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCA
* * * *
187730 AAAACATATTCCCTTCATTAGGATATATGAAATTAATGCTTTGGTGTCGCAAGAGAAGCTTTTCT
320 AAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCT
* * * * *
187795 TTCCAACGTTATTGGTAAAATCAAAGTTTGTCTCTTAAATACGGCAAACTTGAATACTCATACTA
385 TTCCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTA
* * * *
187860 ATCCCCATTCTTTTCAGGATTAGCCA
450 ATCCACTTTCTTTTCTGGATTAGGCA
* * * * * *** * *
187886 CCATAAACATAGTCTTCTAATACGGATATAGGATATTGACAATTTGGTTTCGCT-AGGAACGTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCG-TAAGAAACGCTT
* * * * * * * * *
187950 TTTTCCCA-CAATTTTTGTAGA-TTCTATGTTCGTGCCTCAAATGAGACAAATATGGATTCTGGT
64 TCTTCCCACCAATTTTTGAAAAGTAC-AAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGT
* * * * * * ***
188013 GAGGATCATCATTCATTTCGTGATTAGGCTCTATAAACACATTCTTCTCC--TCAGGATGCTTGA
128 AAGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTC-TCCCCAAT-AGGATAAATGA
* * * * * * *
188076 TATTGATGGTTTTCTGTTGCTTGAAAATCTTCTCTTTGCCTCACTTTCCTTAAAATCAAAGATTG
191 TATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTG
* * *
188141 TACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCACTCTTTCCATGATTAGGAACCAA
256 TACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAA
* * * *
188206 AAACGCAATT-CCTTCATTAGAATACATGACATTGATGCTTTGGTGTCGCAATATAAGCTTTTCT
321 AAACAC-ATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCT
* ** * * * * * *
188270 TTCTAACAATGTTGATAAAATCAAAATTTGTCTCTTATATAAGGCAAACTTGAATAGTTATACTA
385 TTCCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTA
**
188335 ATCCACATTT-TTTT-AAGATTAGGCA
450 ATCCAC-TTTCTTTTCTGGATTAGGCA
* * * * * * *
188360 CCCTAAACATAGTCTTCTCATATGGATACAAGATATTGATGATTTAGTTAT-GCAAGAAACGCTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTT-TCGTAAGAAACGCTT
* * * * * * *
188424 TTTTCCCACCAATTTTTGTAGA-TTCTAAGTTCATGCCCCAAATGGGACAAACATGGATTCTAGT
64 TCTTCCCACCAATTTTTGAAAAGTAC-AAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGT
* * * **
188488 AAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTTCTCC--TCAGGATGCATGA
128 AAGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTC-TCCCCAAT-AGGATAAATGA
** * ** * * *
188551 TATTGATGGTTTTCTTTTGTGTGAAAATCTTTTCTTTTTCTCACTTTCCTTAAAATCAAAGATTG
191 TATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTG
* * *
188616 TACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAACATTGGGAACCAA
256 TACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAA
* * ** * *
188681 AAACACATTCCCTTCGTTAGGATACATTATGTTGATGCTTTGGTGTCGCAAGAGAGGTTTTTCTT
321 AAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTT
* ** * * * ** *
188746 CCCAGTGTTATCGATAAAATGGAAA-TTTGTCTCTTAAATAAG--AGAGTTGAATACTCATACTA
386 TCCAACGTTATTGATAAAAT-CAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTA
*
188808 ATCC-CATTCTTTT-TAGGATTAGGCA
450 ATCCACTTTCTTTTCT-GGATTAGGCA
* * * ** ** *
188833 CAATTAACATAGTCTTCTCATATGGATACAGGATAGT-GATGAATTGGTTTCACAAGAAATGCTT
1 C-ATAAACATAGTCTTCTCATAAGGATACATGATA-TCGATGCTTTGGTTTCGTAAGAAACGCTT
* * * * * * *
188897 TTTTCCCA-TAATTTTTGTAAA-TTCAATGTTCGTGCCTCAAATGAGACAAACATGGATTCTACT
64 TCTTCCCACCAATTTTTGAAAAGTACAA-GTTCATTCCTCAAATGAGACAAACATGGATTCTAGT
* ** ** * *
188960 AAGGATCTTCATTCATTTCGTGACTAGGCACTATAAACACATAGTCCTCATTAGGATAAATGATA
128 AAGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATA
* * * * *
189025 TTGATGGTTTTCTTTCGCATGAAAATCTTTTCTTTGAGC-TGTTTTCCTTAAAATCAAAGTTTGT
193 TTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTG-CCTTATTTTCCTTAAAATCAAAGTTTGT
* * *
189089 ACTTTAAATGAGACATGCATTGATTCCCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAA
257 ACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAA
* **
189154 AACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTGTTCTCC
322 AACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTT
* * * *
189219 CCACCGTTGTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATTAATAGTCATACTAAT
387 CCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAAT
* * *
189284 TCACATTCTTTTCTAGATTAGGCA
452 CCACTTTCTTTTCTGGATTAGGCA
* *
189308 CCATAAACATAGTTTTCTCATAAGGATACATGATATCGATGCTTTGGTTTTGTAAGAAACGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * *
189373 CTTCCCACCAATTTTTTAAAAGTATAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTTA
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA
* *
189438 GGATCTTCATTCATTTCTTAGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATT
130 GGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATT
* * * *
189503 GATGGTTTTATTCTGCTTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGCTTGTACT
195 GATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACT
* *
189568 TTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGAATAGGAACCAAAAAC
260 TTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAAC
* * *
189633 ACATTTCCTTCATTAGAATACATTACATTGATGCTTTGGTGT--C-------G--------T---
325 ACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCA
* * *
189678 A-G---TTGATAAAATCAAAG-TT-TCTCTTATATAGGACAAACATGAATAGTCATACTAATGCA
390 ACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCA
*
189737 CTTTCTTTTCTGGATTACGCA
455 CTTTCTTTTCTGGATTAGGCA
*
189758 CCATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAATGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * * * *
189823 CTTCCCACCAATATTTGAAAAGCATAAGTTCATTCCTCAAATTAGACAAACAAGGATTCTAGTAA
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA
* * *
189888 GGATTTTCATTCATTT-AGTGGTTAGGCACTATAAACACATTGTCCCCAATAGGATCAATGATAT
130 GGATCTTCATTCATTTCA-TGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATAT
* * *
189952 TGATGGTTTTCTTTTGCCTAGAAA-CTTTTTCTTTGTCTTATTTTCCTTAAAATCAAAGTTTGAA
194 TGATGGTTTTCTTTTGCCTGGAAATC-TTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTA
* * * * * * *
190016 CTTTAAATAAGACATGTATTGATTCTCGTAAAAGTCTCCATTCTTTTCAACAGTGGGAGCCAAAA
258 CTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAA
* *
190081 ACACATTCCCCTT-ATTAGGATACATGACATTGATGCTTTGGTGTCGCAA-ATGAAGCTGTTCTC
323 ACACATT-CCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGA-GAAGCTTTTCTT
* * * * *
190144 CCCACCGTTATTGATAAAATCAAAGTTTTTCTCTTAAATAACACAAACATGAATAGTCATGCTAA
386 TCCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAA
190209 TCCACTTTCTTTTCTGGATTAGGCA
451 TCCACTTTCTTTTCTGGATTAGGCA
190234 CCATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* *
190299 CTTCCCACCAATTTTTGAAAAGTAAAAATTCATT-CTCCAAATGAGACAAACATGGATTCTAGTA
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCT-CAAATGAGACAAACATGGATTCTAGTA
* *
190363 AGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTGTCCCAAATAGGATAAATGATAT
129 AGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATAT
* *
190428 TGATGGTTTTCTTTTGCTTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTGTGTAC
194 TGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTAC
* *
190493 TTTAAATGAGTCAAGCATAGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAA
259 TTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAA
* * * *
190558 CACATTCCCTTGAATAGAATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCT
324 CACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
* *
190623 AACGTTGTTGATAAAATCAAAGTTTGTCTCTCAAATAAGACAAACATGAATAGTCATACTAATCC
389 AACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCC
*
190688 ACTTTCTTTTCTGGATTAGCCA
454 ACTTTCTTTTCTGGATTAGGCA
* * * * *
190710 CCATAAACATAGTCTTCTCATAAGGATACATGATTTTGATGCTTTGGTTTTGCAAGATACGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * ** * * **
190775 CTTCTCACCAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAGACAAACATGGATTCTTGTTG
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA
* ** * ** *
190840 GGATCTTCATTCATTTCCTCATTAGGCACTATAAACACATTCTCCTCTTTATGATAAATGATATT
130 GGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATT
* * *
190905 TATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCTTATTTTCCTTAAAATCAAAGTTTGTACT
195 GATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACT
*
190970 TTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCAAAGATTGGGAACCAAAAAC
260 TTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAAC
* **
191035 ACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTGTTCTCCCCA
325 ACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCA
* * *
191100 CCGTTATTGAT-AAATCAAAGTTTGTCTCTTAAATAAGACAAACAAGAGTAGTCATACTAATCCA
390 ACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCA
191164 CTTTCTTTTCTGGATTAGGCA
455 CTTTCTTTTCTGGATTAGGCA
* *
191185 CCATAAACATAGTCTTCTCA-AATAGATACATGATATCGATGCTTTGGTTTCGCAAGAAACGCTT
1 -CATAAACATAGTCTTCTCATAA-GGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTT
* * *
191249 TCTTCCCACCAATTTTTGTAAA-TTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGT
64 TCTTCCCACCAATTTTTGAAAAGTAC-AAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGT
* * *
191313 AAGGATCTTCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATA
128 AAGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATA
** * * *
191378 TTGATGGTTTTCTTTTGAATGAAAATATTTTCTTTGCCTTATTTACCTTAAAATCAAAGTTTGTA
193 TTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTA
* * * *
191443 CTTTAAATGAGACAAGTATTAATTCTCGTAAAAGTCTCCATTTTTTCCAAGATTGCGAACCAAAA
258 CTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAA
*
191508 ACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTTC
323 ACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTC
* * * * * *
191573 TAATGTTGTTGATAAAATC-AAGTTTGTCTCTTAAATAAGGCAAACTTGAATACTCATACTAATC
388 CAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATC
* * * ** *
191637 CCCATTCGTTTCAAGATTAGCCA
453 CACTTTCTTTTCTGGATTAGGCA
* ** * * * * *
191660 CCATAAACATAGTCTTCTGATACTGATACAGGATATTGATGATTTGGTTTCGCT-AGGAACACTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCG-TAAGAAACGCTT
* * * * * * * * *
191724 TTTTCCCA-TAATTTTT--ACAGATTCTATGTTCGTGCCTCAAATGAGCCAAATATGGATTCTAG
64 TCTTCCCACCAATTTTTGAAAAG-TAC-AAGTTCATTCCTCAAATGAGACAAACATGGATTCTAG
* * * * * ***
191786 TAAGGATCATCATTCATTTCGTGATTAGGCTCTATAAACACATTCTTCTCC--TCAGGATGCGTG
127 TAAGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTC-TCCCCAAT-AGGATAAATG
* * * * * *
191849 ATATTGATGGTTTTCATTAGCTTGAAAATCTTTTCTTTGCCTCACTTTT-CTTAAAATCAAAGAT
190 ATATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTA-TTTTCCTTAAAATCAAAGTT
* * *
191913 TGTACTTTAAATGAGACAAGCAATGATTCACGTAAAAGTCTCCATTATTTCCAAGATTGGGAACC
254 TGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACC
* * * * *
191978 AAAAAAACATTCTCTTCATTAGGATATATGACATTGATGCTTTGGTGTCGTAAGAGAAGCTTTTT
319 AAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTC
* * *
192043 TTTCCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGGCAAACTTGAATACTCATACT
384 TTTCCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACT
*
192108 AATCCACATTCTTTT-TAGGATTAGGCA
449 AATCCACTTTCTTTTCT-GGATTAGGCA
* * * * * * *
192135 CCCA-AAACATAGTCTTCTCATACGGATACAAGATATTGATGATTTAGTTTTGCAAGAAACGCTT
1 --CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTT
* * * * *
192199 TTTTCCCACCAATTTTTGTAAA-TTCTAAGTTCATGCC-CGAAATGGGACAAACATGGATTCTAG
64 TCTTCCCACCAATTTTTGAAAAGTAC-AAGTTCATTCCTC-AAATGAGACAAACATGGATTCTAG
* * * ** * *
192262 TAAGGATCTTCATTCATTTCATGATTAGCCACTATAAACACATTCTCCTCTTTAGGATAATTAAT
127 TAAGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGAT
* * * *
192327 ATTGATGGATTTCTTTTGCATAGAAATCTTTTCTTTGTCTTATTTTCCTTAAAATCAAAGTTTGT
192 ATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGT
* * * * *
192392 ACTTTAAATGAGATAGGCGTTGATTCTCGGAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAA
257 ACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAA
* * *
192457 AACACATTCCCTTCGTTAGGATACATGACATTGACGCTTTGGTGTCGCAAGAGAAG-TTGTTCTC
322 AACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTT-TTCTT
* ** * *
192521 CCCTCCGTTATTGATAGAATTAAAGTTTGTCTC-TAAACTAAGACAAACATGAATAGTCATACTA
386 TCCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAA-TAAGACAAACATGAATAGTCATACTA
192585 ATCCACTTTCTTTTCTGGATTAGACGC-
450 ATCCACTTTCTTTTCTGGATTAG--GCA
* * * * * *
192612 CATACACATAGTCTTCTCATATGGATACATGATCTCGATGCTTTAGTTTCGCAAGATACGCTTTC
1 CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTTC
** * ** * * **
192677 TTCTGACCAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAGACAAACATGGATTCTTGTTGG
66 TTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAAG
* * * * ** *
192742 GATCTTCATTCATTTC-CGGATTAGGCACTATAAACACATTTTTCTCTTTACGATAAATGATACT
131 GATCTTCATTCATTTCATGG-TTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATA-T
* *
192806 T-ATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCTTATTTTCCTTAAAATCAAAGTTTGTAC
194 TGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTAC
* * * * * *
192870 CTTAAATGAGACATGCGTTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGTGATCCAAAAA
259 TTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAA
* * * **
192935 CACATACCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCCAGAGAAGCTGTTCTCCCC
324 CACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
* * * * *
193000 ACCGTTATTGATAGAATTAAAGTTTGTCTCTTAAATAAGATAAACATGAATAGTCATACCAATCC
389 AACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCC
*
193065 ACTTTCTTTTCTAGATTAGGCA
454 ACTTTCTTTTCTGGATTAGGCA
* * * *
193087 CCATAAACATAGTCTGCTCATATGGATACATGATATCGATGCTTTGGTTTTGCAAGAAACGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * * * *
193152 CTTCCCGCCAATTTTTGTAAA-TTCTAAGTTCATGCCTCAAATGAGACAAACATTGATTCTAGTA
65 CTTCCCACCAATTTTTGAAAAGTAC-AAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTA
* * * * * * ** **
193216 AGGATCATCATTTATTTCGTGATTAGGCACTATAAACACATTATTCTCCTCT-GGATGGATGATA
129 AGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATT-CTCCCCAATAGGATAAATGATA
* ** * * *
193280 TTGATGGTTTTCTTTTGCTTAAAAATCTTTTCTTTGCCTCACTTTCCTTAAAATCAAAGATTGTA
193 TTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTA
* *
193345 CTTTAAATGCGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAGCCAAAA
258 CTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAA
** * *
193410 ACACATTTTCTTCATTAGGATATATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTTTTTC
323 ACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTC
* *
193475 CAACGTTATTGATAAAATCAAAGTTTGTCTTTTAAATAA-AGCAAACTTGAATAGTCATACTAAT
388 CAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGA-CAAACATGAATAGTCATACTAAT
*
193539 CCACATTCTTTT-TAGGATTAGGCA
452 CCACTTTCTTTTCT-GGATTAGGCA
* * * * *
193563 CCATAAACATAGTCTTTTCATAAGGATACGTGATATTGATGGTTTGGTTTCGCAAGAAAAC-CTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAG-AAACGCTT
* * * **** * * *
193627 TCTTCCCACCAATTTTTGTAAA-TGCTAATTTTGCGCCACAAATGAGACAAGCCTGGATTCTAGT
64 TCTTCCCACCAATTTTTGAAAAGTAC-AAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGT
* * * *
193691 AAGGATCTTCACTCATTTCATGATTAGGCACTATAAACACATTCTCCTC-ATCAGGATAAACGAT
128 AAGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAAT-AGGATAAATGAT
* * *
193755 ATTGATGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAATGTTTGT
192 ATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGT
* * * *
193820 ACTTTAAATGAGACAAGCATTGATTCACATAAAAGTCTCCATTTTTTCCAAGATTGGGAACTAAA
257 ACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAA
* * *
193885 AACACATTCTCTTGATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTT
322 AACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTT
* * * * * * *
193950 CTAATGTTGTTGATAAAATC-AAGTTTGTCTCTTAAATAAGGCAAGCCA-GAATACTCACACTAA
387 CCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAA-ACATGAATAGTCATACTAA
* * * *
194013 TCCCCATTCTTTTCAGGATTAGCCA
451 TCCACTTTCTTTTCTGGATTAGGCA
* * * * * * * * *
194038 CCATAAACATAGTCTTCTGATACGAATACAGGATATTGATGATTTGGTTTTGCT-AGGAATGCTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCG-TAAGAAACGCTT
* * * * * *
194102 T-TTCCCA-CAATTTTTGTAGA-TTCTATGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGT
64 TCTTCCCACCAATTTTTGAAAAGTAC-AAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGT
* * * * * * *
194164 AAGGATCATCATACATTTCGTGATTAGGCACTATAAACACATTATTCTCC--TCAGGATACATGA
128 AAGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATT-CTCCCCAAT-AGGATAAATGA
* ** * ** * * ** ** *
194227 TATTGATGCTTTGGTTTCGCAAGAAAAAC-TTTCTTCCCACCAATTTT--TGT-AAATGCTAA-T
191 TATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGC-CTTATTTTCCT-TAAAAT-CAAAGT
* **** * * * * *
194287 TTCGTGCCCCGAATGAGACAAGCATGGATTCTAGT-AAGGATCTTCATTCATTT-CAAGATTAGG
253 TT-GTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAG-TCTCCATTC-TTTCCAAGATTGGG
* * * * * * * * * * ** * * ** * *
194350 CACTATAAACGCATTCTCC-TCATCAAGATAAACGATATTGATGGTTTTCTTTTGCTTGAAAATC
315 AACCAAAAACACATTC-CCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGC
* ** * * * *
194414 TTTTCTTTGC--C-TTATTTTCCTTAAAATCAATGTTTGTACT-TTAAATGAGACAAGCATTGAT
379 TTTTCTTTCCAACGTTA--TT-GATAAAATCAAAGTTTGT-CTCTTAAATAAGACAAACA-TGAA
* * * * ** * *
194475 TTG-CGTA-AAAGTCTC-CATTT-TTTCCAAGATTGGGAA
439 TAGTCATACTAA-TC-CAC-TTTCTTTTCTGGATTAGGCA
* * * * * * * * **
194511 GCAAAAACACATTC-TCTTCATTAGGATACAAGACATTGATGCTTTGGTGTCACAAGAGAA-GCT
1 -CATAAACATAGTCTTC-TCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGA-AACGC-
* * * ** * * * * * *
194574 TTTCTT---TCTAA-TTTT--CAAGT--TTG-TC--T-CTTAAATAAGGCAAACTTGAATACTCA
62 TTTCTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCT-A
* *** ** * * * * * * * * * *
194627 -CACTAATCCCCATT-ATTTTC-CGGATTCGCCACCATAAACATAGTCT-TCTAAAACGGATACA
126 GTAAGGATCTTCATTCA-TTTCATGG-TTAGGCACTATAAACACATTCTCCCCAATA-GGATAAA
* * ** * ** * *
194688 GGATATTGATGATTTGGTTTTG-CTAGGAACA-C-TTT-TTTCCCACAATTTT--TGT-AGATTA
188 TGATATTGATGGTTTTCTTTTGCCT-GGAA-ATCTTTTCTTTGCC-TTATTTTCCT-TAAAATCA
* * * * * ** * * * * **
194746 TATGTTCGTGCCTCAAATGAGACAAATATGGATTCTAGT-AAGGATCAT-CATTCGATT-CGTGA
249 -AAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAG-TC-TCCATTC-TTTCCAAGA
* * * * * * * * * * * ** * * *
194808 TTAGGCACTATAAACACATT--CTTCCCCTCAGGATGCGTGATATTTATGATTTTCTTTTGCTTA
310 TTGGGAACCAAAAACACATTCCCTT--CATTAGGATACATGACATTGATGCTTTGGTGTCGC-AA
* * * *** * ** *
194871 TA-AATCTTTTCTTTGCCTCAC-TT-TCCTTAAAATCAAAGATTGTACT-TTAAATGGGACAAGC
372 GAGAAGCTTTTCTTT-CC-AACGTTATTGATAAAATCAAAGTTTGT-CTCTTAAATAAGACAAAC
** * * * * ** * *
194932 ATTG-ATTCTCGTA-AAAGTCTC-CATTATTTTCAAGATTGGGAA
434 A-TGAATAGTCATACTAA-TC-CACTTTCTTTTCTGGATTAGGCA
* * * * * * * * *
194974 CCAAAAACACATTC-TCTTCATTAGGATATATGACATTGATGCTTTGGTGTCGCAAGAGAA-GCT
1 -CATAAACATAGTCTTC-TCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGA-AACGC-
* * * * * * * * * * *
195037 TTTCTTTCCAAC-GTTATTGATAAAAT-CAAGTT--TGTCTCTTAAATAAGGCAAGCCA-GAATA
62 TTTCTTCCCACCAATTTTTGA-AAAGTACAAGTTCAT-TC-CTCAAATGAGACAA-ACATGGATT
*** ** * * * * * * **
195097 CTCA-TACTAATCCCCATTCTTTTCA-GGATTAGCCACCATAAACATAGTCT-TCTGATACGGAT
123 CT-AGTAAGGATCTTCATTCATTTCATGG-TTAGGCACTATAAACACATTCTCCCCAATA-GGAT
* * * * ** * * * * *
195159 ACAGGATATTGAAGATTTGGTTTT-TCTAGG-AATGC--TT-TTTCCCATAATTTT--TGTAGAT
185 AAATGATATTGATGGTTTTCTTTTGCCT-GGAAAT-CTTTTCTTTGCC-TTATTTTCCT-TAAAA
* * * * * * * * * * *
195217 TCTATGTTTGTGCCTCAAATGAGACAAACATGGATTCTAGT-AAGGATCAT-CATACATTT-CAT
246 TCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAG-TC-TCCATTC-TTTCCAA
* * * * * * * * *
195279 GATTAGGCACTATAAACACATT-CTTCTCCTCAGGATACATGATATTGATGCTTTGGTTTCGCAA
308 GATTGGGAACCAAAAACACATTCCCT-TCATTAGGATACATGACATTGATGCTTTGGTGTCGCAA
* * * * * * * * *** * *
195343 GAAAAAC-TTTCTTCCCACCAATTTTTG-T-AAATGCTAA-TTTCATGC-CCCGAATGAGACAAG
372 GAGAAGCTTTTCTTTCCAAC-GTTATTGATAAAAT-CAAAGTTT-GT-CTCTTAAATAAGACAAA
* ** ** *** *
195403 CATGGATTCTTGTAAGGATCTTCAC-TT-ATTTCAT-GATTAGGCA
433 CATGAATAGTCATACTAATC--CACTTTCTTTTC-TGGATTAGGCA
* * * * * * ** * * **
195446 CTATAAACACATTC-TCTTCATCAGGATAAATGATATTGATGGTTTTCTTTTGCT-TGAAAATCT
1 C-ATAAACATAGTCTTC-TCATAAGGATACATGATATCGATGCTTTGGTTTCG-TAAGAAACGC-
** ** * ** * * * * *
195509 TTTCTTTGC-CTTATTTTCCTTAAAA-T-CAATGTTTGTACTTTAAATGAGACAAGCATTGATTC
62 TTTCTTCCCACCAATTTT--TGAAAAGTACAA-GTTCATTCCTCAAATGAGACAAACATGGATTC
** * * * * * * * * ** *
195571 GCGTAA-AAGTCTCCATT-TTTTCCAAGATTGGGAAGC-AAAAACACATTCTCTTCATTAGGATA
124 TAGTAAGGA-TCTTCATTCATTT-CATGGTTAGGCA-CTATAAACACATTCTCCCCAATAGGATA
* ** ** * **
195633 CAA-GACATTGAT--TTTT-TGGTGTCACAAGAGAAGC-TTTCTTT--CTAATATTGTT-GATAA
186 -AATGATATTGATGGTTTTCTTTTG-C-CTGGA-AATCTTTTCTTTGCCT--TATT-TTCCTTAA
* * * * * * * * * *
195690 AATC-GAGTTTAT-CTCCTAAATAAGGCAAAC-TTGATTACTCATACTAA-TCCCCATTCTTTTC
244 AATCAAAGTTTGTACT-TTAAATGAGACAAGCATTGATT-CTCGTA-AAAGTCTCCATTCTTTCC
* ** * * * * ** ** * * * * *
195751 AAGATTTGCCACCATAAACATAGTCTTCTGAAACA-GATACAGGATATTGATGATTTGGTTTTGC
306 AAGATTGGGAACCAAAAACACATTC-CCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGC
* * * * * * * * * * * *
195815 TAG-GAA-CACTTT-TTTCCCACAATTTTTG-TAGATTCTATGTTCGTGC-CTCAAATGAGACAA
370 AAGAGAAGC-TTTTCTTTCCAAC-GTTATTGATAAAATCAAAGTTTGT-CTCTTAAATAAGACAA
* * * **
195875 ACATGGAT--TC-TAGTAAGGAT-CATCATTCGATTC-GTGATTAGGCA
432 ACATGAATAGTCATACT-A--ATCCA-CTTTCTTTTCTG-GATTAGGCA
* * * * * * * * * ** * * * *
195919 CTATAAATACATTCTTCTCCTCAGGATGCATGTTATTGATGGTTTTCTTTTGCTTATAAATC-TT
1 C-ATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCG-TAAGAAA-CGCT
* * * * * * * * * * *
195983 TTCTTTGCC-TCACTTTCCTT-AAAATTA-AAGATT-GTACTTTAAATGGGACAAGCATTGATTC
63 TTC-TTCCCACCAATTT--TTGAAAAGTACAAG-TTCATTCCTCAAATGAGACAAACATGGATTC
* * * * * * * * * * ** * *
196044 TCGTAA-AAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCTCTTCATTAGGATATA
124 TAGTAAGGA-TCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAA
* * ** * * ** * * **
196108 TGACATTGATGCTTTGGTGTCG-CAAGAGAAGCTTTTCTTT-CC-AACCTTATT-GATAAAATCA
188 TGATATTGATGGTTTTCTTTTGCCTGGA-AATCTTTTCTTTGCCTTA--TT-TTCCTTAAAATCA
* * * ** * * * *
196169 AAGTTTGT-CTCTTAAATAAGGCAAAC-TTGAATAGTCATACTAA-TC-CACATTCATTT-TAGG
249 AAGTTTGTACT-TTAAATGAGACAAGCATTG-ATTCTCGTA-AAAGTCTC-CATTC-TTTCCAAG
* * * * ** ** * *
196229 ATTAGGCACCATAAAA-ATAGTCTTTTCACAAGGATACATGATATTGATGCTTTGGTTTCGCAAG
309 ATTGGGAACCA-AAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAG
* * * * ** * *
196293 A-AA-C-TTTCTTCCCAACAATTTTTG-T-AAATGCTAA-TTTCGTGC-CCCAAATGAGACAAGC
373 AGAAGCTTTTCTTTCCAAC-GTTATTGATAAAAT-CAAAGTTT-GT-CTCTTAAATAAGACAAAC
* * * ** * *
196351 AAGGAT--TC-TAGTAAGGATCTTCATTCATTTCAT-GATTAGGCA
434 ATGAATAGTCATACT-A--ATCCACTTTCTTTTC-TGGATTAGGCA
* * * * * * ** * * * **
196393 CTATAAACACATTCTTCTCATCAGGATAAATGATATTGATGGTTTTCTTTTGCATGAAAATCTTT
1 C-ATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGC-TT
** ** * ** * * * * * *
196458 TCTTTGC-CTTATTTTCCTTAAAA-T-CAATGTTTGTACTTTAAATGAGACAAGCATTGATTCTC
64 TCTTCCCACCAATTTT--TGAAAAGTACAA-GTTCATTCCTCAAATGAGACAAACATGGATTCTA
* * * * * * * ** * *
196520 GTAA-AAGTCTCCATT--TTCTCCAAGATT-GGTAACCAAAAACACATTCTCTTCATTAGGATAC
126 GTAAGGA-TCTTCATTCATT-T-CATGGTTAGG-CACTATAAACACATTCTCCCCAATAGGATAA
** * ** * ** * **
196581 ATGACGTTGAT-GCTTTGGTGT-CACAAGAGAAGCTTTTCTTT--CTAATATTGTT-GATAAAAT
187 ATGATATTGATGGTTTTCTTTTGC-CTGGA-AATCTTTTCTTTGCCT--TATT-TTCCTTAAAAT
* * * * * * * * * * *
196641 C-GAGTTTAT-CTCCTGAATAAGGCAAACA-TGATTACTCATACTAA-TCCCCATTCTTTTCAAG
247 CAAAGTTTGTACT-TTAAATGAGACAAGCATTGATT-CTCGTA-AAAGTCTCCATTCTTTCCAAG
* ** * * * * ** ** * * * * * *
196702 ATTTGCCACCATAAACATAGTCTTCTGAAACA-GATACAGGATATTGATGATTTGGTTTTGCTAG
309 ATTGGGAACCAAAAACACATTC-CCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAG
* * * * * * * * * *
196766 -GAA-CACTTT-TTTCCCACAATTTTTG-TAGATTCTATGTTTGTGC-CTCAAATGAGACAAACA
373 AGAAGC-TTTTCTTTCCAAC-GTTATTGATAAAATCAAAGTTTGT-CTCTTAAATAAGACAAACA
* * *
196826 T-AGAT--TC-TAGTAAGGAT-CATCATTCATTTC-GTGATTAGGCA
435 TGA-ATAGTCATACT-A--ATCCA-CTTTCTTTTCTG-GATTAGGCA
* * * * * * * * ** * * *
196867 CTATGAACACATTCTTCTCTTCAGGATGCATGATATTGATGGTTTTCTTCTACTTATA-AATC-T
1 C-ATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTT-T-CGTA-AGAAACGC
* * * * * * * * *
196930 TTTCTTTACC-TCACTTTCCTT-AAAA-T-CAAAGATT-GTACTTTAAATGAGACAAGCATTGAT
62 TTTC-TTCCCACCAATTT--TTGAAAAGTAC-AAG-TTCATTCCTCAAATGAGACAAACATGGAT
* * * * * * * * ** *
196990 TCTCA-TAAATG-TCTCCATTC-TTTCAAGATTGGGAACCAAAAACACATTCTCTTCATTAGGAT
122 TCT-AGT-AAGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGAT
* * * * ** * ** * * * **
197052 ATATGACATTAAT-GCTTTGGTGT-CACAAGAGAAGCTTTTCTTTGCAACGT-TGTT-GATAAAA
185 AAATGATATTGATGGTTTTCTTTTGC-CTGGA-AATCTTTTCTTTGC--CTTATTTTCCTTAAAA
* ** * ** * * **
197113 TCAAAGTTTGT-CTCTTAAATAAGGTAAAC-TTGAATAGTCATACTAA-TC-CACATTCTTTTTA
246 TCAAAGTTTGTACT-TTAAATGAGACAAGCATTG-ATTCTCGTA-AAAGTCTC-CATTCTTTCCA
* * * * * ** * * *
197174 GGATTAGGCACCATAAAA-ATAGTCTTTTCATAAGGATACATGATATTGATGCTTTGGTTTCGCA
307 AGATTGGGAACCA-AAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCA
* * * * ** * *
197238 AGAAAAAC-TTTCTTCCTACCAA--TTTTTG-T-AAATGCTAA-TTTCGTGC-CCCAAATGAGGC
371 AGAGAAGCTTTTCTT--T-CCAACGTTATTGATAAAAT-CAAAGTTT-GT-CTCTTAAATAAGAC
* * * ** * * *
197296 AAGCATGGAT--TC-TAGTAAGGATCTTCATTCATTTC-GCA--A-G-A
430 AAACATGAATAGTCATACT-A--ATCCACTTTCTTTTCTGGATTAGGCA
* * * * * * * **
197337 -A-AAACACATTC-TCTTTATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAA-GCTT
1 CATAAACATAGTCTTC-TCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGA-AACGC-T
* * * * * * *
197398 TTCTT---TCTAATGTTGTTGATAAAAT-CAAGTT--TGT-CTCTAAATTATGGCAAACTTGAAT
63 TTCTTCCCACCAAT-TT-TTGA-AAAGTACAAGTTCAT-TCCTC-AAATGA-GACAAACATGGAT
* * *** ** * * * * * * * ** *
197456 ACCCA-TACTAATCCCCATTCTTTTC-CGGATTAGCCACCATAAACATAGTCT-TCTGATACAGA
122 -TCTAGTAAGGATCTTCATTCATTTCATGG-TTAGGCACTATAAACACATTCTCCCCAATA-GGA
* * * ** ** ** ** * *
197518 TATAGGATATTGATGATTTAGTTTTG-CTAGGAACGC-TTT-TTACCCACAATTTT--TGTAGAT
184 TAAATGATATTGATGGTTTTCTTTTGCCT-GGAAATCTTTTCTTTGCC-TTATTTTCCT-TAAAA
* * * * * * * * ** * * * * **
197578 TCTATGTCTGTGCCTGACATGAGACAAACACGGATTCTAGT-GAGGATCAT-CATACATTT-CGT
246 TCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAG-TC-TCCATTC-TTTCCAA
* ** * * * ** * * * *
197640 GACTACGCACTATAAACACATT-ATTCTCCTCAGGATACATGATATTGATGCTTTGGTTTCGCAA
308 GATTGGGAACCAAAAACACATTCCCT-TCATTAGGATACATGACATTGATGCTTTGGTGTCGCAA
* * * * * * ** * ** * *
197704 GAAAAAC-TTTCTTCCCACCAATTTTTG-TAAACGCTAA-TTTCGTGC-CCCAAATGAGACAAGC
372 GAGAAGCTTTTCTTTCCAAC-GTTATTGATAAAATCAAAGTTT-GT-CTCTTAAATAAGACAAAC
* * ** * *
197765 ATGGAT--TC-TAGTAAGGATCTTCATTCATTTCAT-GATTAGGCA
434 ATGAATAGTCATACT-A--ATCCACTTTCTTTTC-TGGATTAGGCA
* * * * * * * ** * * * **
197807 CTATAAACACATTCTCCTCATCAGGATAAATGATATTGATGGTTTTCTTTTGCATGAAAATCTTT
1 C-ATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGC-TT
** ** * * ** ** * * * * *
197872 TCTTTGC-CTTATTTTCCTTAAAATTA-GTGTTTGTACTTTAAATGAGACAAGCATTGATTCTCA
64 TCTTCCCACCAATTTT--TGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCT-A
* * * * * * ** * *
197935 -TAA-AAGTCTCCATTC-TTTCCACGGTT-GGGATCCAAAAACACATTCTCTTCATTAGGATACA
126 GTAAGGA-TCTTCATTCATTT-CATGGTTAGGCA-CTATAAACACATTCTCCCCAATAGGATAAA
* * ** * * ** * * **
197996 TGACATTGATGCTTTGGTGTCG-CAAGAGAAGCTTTTCTTT-CC-AACGTTATT-GATAAAATCA
188 TGATATTGATGGTTTTCTTTTGCCTGGA-AATCTTTTCTTTGCCTTA--TT-TTCCTTAAAATCA
* * * * * * * ** *
198057 AAGTTTGT-CTCTTAAATAAGGCAAAC-TTGAATACTCATACTAA-TC-CACATTATTTTTAGGA
249 AAGTTTGTACT-TTAAATGAGACAAGCATTG-ATTCTCGTA-AAAGTCTC-CATTCTTTCCAAGA
* * ** * * * * * * * * *
198118 TTAGGCACCCTAAACATAGT--CTTCACATATGGATACAAGATATTGATGATTTAGTTTTGCAAG
310 TTGGGAACCAAAAACACATTCCCTTCA-TTA-GGATACATGACATTGATGCTTTGGTGTCGCAAG
* * * ** * **
198181 A-AACGCTTTT-TTCCCTCCAA-GTT-TTG-TAAATTCTAAGTTCGTGACTCAAATGGGACAAAC
373 AGAA-GCTTTTCTT---TCCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAAC
* * ** * *
198241 ATGGAT--TC-TAGTAAGGATCTTCATTCATTTCAT-GATTTAGTTTTGCA
434 ATGAATAGTCATACT-A--ATCCACTTTCTTTTC-TGGA-TTAG----GCA
* * * * * ** * * * * *
198288 -AGAAAC---GCTCTTTTGCGTTAA-AAT-C-T--TTTCTTTACCTCGTTTTCGTAAAATCAAAC
1 CATAAACATAG-TCTTCT-C-ATAAGGATACATGATATCGATGCTTTGGTTTCGT--AA-GAAAC
* *** ** ** *** * * *
198344 -TTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTCTAATATTGGGA
60 GCTT-T-CTTCCCA--CCA-AT-TTTTGA--AAAGTACAAGT-T-CATTC-CTC-AA-A-TGAG-
**** * * * * * *
198408 ACCAAGAACACATTCCCTCTA-TTAGGATACATGACATTGATGCTT--TGG-T-GTCACAAGAGA
110 A-C---AA-ACATGGATTCTAGTAAGGAT-C-T-TCATTCAT--TTCATGGTTAGGCACTATA-A
** ** * * * * * ** ** **
198468 AGC-TTTTCTTTCC-AT--CATTATTGATAGAATCAAAGTTTATCTCTTAAACAAGGCAAA-CAT
164 A-CACATTCTCCCCAATAGGATAAATGAT--ATTGATGGTTT-TCT-TT-TGCCTGG-AAATC-T
* * ** * * *
198528 GAATACTAGGCACTATAAACACATTCGCCTCATTAGGATAAATGATATTCATGGTTT-T-CTTT-
221 --TTTCTTTGC-CT-T------ATT---TTCCTT---A-AAATCA-A---A--GTTTGTACTTTA
* * * * * * **
198590 AACGCGACAATCTTTTCTTTGCCTTATTTTCTTTAAAA-TC-AAAGTTTGTACTTT--AA-A-TG
263 AATGAGACAA-----GCATTG----ATTCTC-GTAAAAGTCTCCA---T-T-CTTTCCAAGATTG
* * * ** * ** ** * **** * * * *
198649 AG-ACCTACATTA-ATTCCCGT-AAAAGTCTCCATTTTTTTCAAG-ATTGG-GAAC-CAA-A-AA
313 GGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTG-TCGCAAGAGAA
* * ** * * ** * * * ** *
198706 CACATACCCTT-C-A--TTA-GGATACATGACATTGATGCTGTGGTGTCGCAAGAGAAGTATTCT
377 -GCTTTTCTTTCCAACGTTATTGATA-A--A-ATCAAAG-T-TTGTCTCTTAA-ATAAG-A--C-
*** * * * * * * ** * ** * * *
198766 CCCCACCG-TTATTGATA-GAATCAAAGTT-GTCCCTGAAATATGACTAA
430 AAACA-TGAATAGTCATACTAATCCACTTTCTTTTCTGGATTA-GGC--A
* * * * * ***** * * * * * **
198813 TATGAATACTCATACTAATCCCCATTCCTTTCCA-GATTAGGCACCATAAAC-ATAATCTTCGCA
1 CAT-AA-A--CATAGT-CTTCTCATAAGGATACATGA-TA---TCGAT--GCTTTGGT-TTCG--
* * ****** * * ***
198876 TAAGGATATATG--ATCTT--GGTGTTTTGGTTTCG-CAGGATACCCTTTC-TTCC-CACCAATT
52 TAA-GA-A-ACGCTTTCTTCCCACCAATT--TTT-GAAAAG-TACAAGTTCATTCCTCA--AA--
** ** * ** ** * *
198934 TTTGTA-AAGTAT-GAGTTCATTGCTCAAATGAGA-CAAACATGGA-TTC-TTG-TAGGGATCT-
106 TGAG-ACAAACATGGA-TTC-TAG-T--AA-G-GATC-TTCATTCATTTCATGGTTAGGCA-CTA
* ** *** * * * *** ** * * ***
198992 T-CATTCATT-TCATGATTAGGCA-CAAT-AAACACATTCTTCTCCTCAACAC-GCATGATATTG
161 TAAACACATTCTCCCCAATAGG-ATAAATGATATTGATGGTTTTCTTTTGC-CTG---GA-A---
* * *
199052 ATGGTTTTCTTTTGCGTGGAAATCTTTTCTTTGCCTCACTTTCCTTAAAATCAAAGTTTGTATTT
217 AT-CTTTTC--TT---T-G----C----C--T---T-ATTTTCCTTAAAATCAAAGTTTGTACTT
* * * *
199117 TAAATTAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCTAGATTGGAAACCAAAAACA
261 TAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAACA
* * * *
199182 CATTCTCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCACAAGAGAGGCTTTTCTTTCCAA
326 CATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCAA
* * * * * ** *
199247 CGTAATCGAGAAAATCAAAATTTGTCTGTTAAATAAGAC-AAGGTGGAAT-GCTCATGCTAATCC
391 CGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACAT-GAATAG-TCATACTAATCC
* **
199310 -CATTCTTTTAAGGATTAGGCA
454 ACTTTCTTTTCTGGATTAGGCA
** * * * *
199331 CCATAAACA-ATGTCTTCGAATAAGGATAAATGATATTGATGCTTTGGTTTCGCAAGAAACACTT
1 -CATAAACATA-GTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTT
* * * * * * ** *
199395 TCTTCCCACCAATTTTTGTAAA-TTCAAATTTCGTACCCCAAATGAGACAAGTATGGATTCTAGC
64 TCTTCCCACCAATTTTTGAAAAGTAC-AAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGT
* ** * * *
199459 AAAGATCTTCATTCATTTCATAATTAGGCACTATAAACACATTCTTCTCATTAGGATAAATGATA
128 AAGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATA
* * *
199524 TTGATGGTTTTCTTTTACGTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAATTTGTA
193 TTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTA
* * * * * * *
199589 CTTTAAATGATACATGCGTTGGTTCTCGCAAAAGTCTCCATTCTTTCCATGGTTGGGAACCAAAA
258 CTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAA
** * *
199654 ACACATTCTATTCATTAGGATACATGACTTTGAAGCTTTGGTGAT-GCAAGAGAAGCTTTTCTTT
323 ACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTG-TCGCAAGAGAAGCTTTTCTTT
* * * * * * * * *
199718 CCACCGTTTTTGATAGAATCAAAG-TTGTCTCTTAAATAAGGCAAAAATGAATACTAACACTGAT
387 CCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAAT
* * * *
199782 CCCCATTCCTTTCAGGATTAGGCA
452 CCACTTTCTTTTCTGGATTAGGCA
* * * * *
199806 CCATAAACATAGTCTTCTCATAAGGATACATGATTTTGATGCTTTAGTTTCGCT-GGATACGCTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCG-TAAGAAACGCTT
* ** * **
199870 TCTTCCC-CACAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAGACAAACATGGATTCTTCT
64 TCTTCCCAC-CAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGT
* * ** * * * ** *
199934 -AGAGATCTTTATCCATTTTGTGATTAGGCACTATAAACATATTCTCCTCTTTAGGATACATGAT
128 AAG-GATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGAT
* *
199998 ATTTATGGTTTTCTTTTGCGTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGT
192 ATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGT
* * *
200063 ACTTTAAATGAGACATGCGTTGATTCTCGCAAAAGTCTCCATTCCTTT-CAAGATTGGGAACCAA
257 ACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATT-CTTTCCAAGATTGGGAACCAA
* * * *
200127 AAACACGTTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAGAAGGTTTTCTT
321 AAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTT
* * * *
200192 TCCACCATTATTGATAGAATCAAAG-TTGTCTCTTAAATAAGACAAACATGAATACTCATACTAA
386 TCCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAA
*
200256 TCC-CTATTCTTTTCAGGATTAGGCA
451 TCCACT-TTCTTTTCTGGATTAGGCA
* * * * ** * *
200281 CCATAAACGTAGCCTTCGCATAAGGATACATGATCTTC-ATGCTTTGGTTTCACATGATACGCTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGAT-ATCGATGCTTTGGTTTCGTAAGAAACGCTT
* * ** * * * *
200345 TCTTCCCACCAATTTTTGTAAGGTATGAGTTCATTGCTCAAATGAGACGAACTTGGATTCTTGTA
64 TCTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTA
* * * * * * **
200410 GGGATCTTCATTCATTTCATGATTAGGCAATATAAGCACATTATCCTCTTTAGGATAAATGATAC
129 AGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATA-
* * *
200475 TT-ATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTA
193 TTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTA
* * * *
200539 CTTTAAATGAGACATGCATTGATTCTTGCAAAAGTCTCCATTCTTTTCAA-ATTTGGGAACCAAA
258 CTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGA-TTGGGAACCAAA
* * * * *
200603 GAGACATTCCTTTCACTAGGACACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTT
322 AACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTT
* ** * *
200668 CCACCGTTATTGATTGAATCAAAG-TTGTCTCTTAACTAATG-CAAA-ACTGAATACTCATACTA
387 CCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAA-GACAAACA-TGAATAGTCATACTA
* * *
200730 ATCCCCATTCCTTTT-AGGATTAGGCA
450 ATCCAC-TTTCTTTTCTGGATTAGGCA
* * * * *
200756 CCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCGCAGGATACGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* ** * *
200821 TTTCCC-CACAATTTTTGAAAAGTATGAGTTCATTGCTCAAATGAGACAAACATGGATTCTTGTA
65 CTTCCCAC-CAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTA
* * * ** **
200885 GGGATCTTCATTCATTTCGTGAG-TAAGCACTATAAACACATTCTCATCTTTAGGATAAATGATA
129 AGGATCTTCATTCATTTCATG-GTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGAT-
* *
200949 ATT-ATGGTTTTCTTTTGCTTGGAAATCTTTTCTTTAGCATT-TTTTCCTTAAAATCAAAGTTTG
192 ATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTT-GCCTTATTTTCCTTAAAATCAAAGTTTG
* * * *
201012 TACTTTAAATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGGTTGGGAACCAA
256 TACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAA
* * * *
201077 AAACACATTCCTTTCACTAGGACACATGACATTGATGCTTTGGTGTCGTAAGAGAAGCTTTTCTT
321 AAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTT
* * * *
201142 TCCACCGTTATTGATAGAATCAAAG-TTGTCTCTTAAATAAGACAAATATGAATACTCATACTAA
386 TCCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAA
* * *
201206 TCCACATTC-CTTCAGGATTAGGCA
451 TCCACTTTCTTTTCTGGATTAGGCA
* *
201230 CCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTC-TCAA-AATACGCT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGT-AAGAA-ACGCT
* * * * * * *
201293 TTTTTCCCACCAATTTTTGTAAACTACGAGTTTATTGCTCAAATGAGACAAACATGGATTCTTGT
63 TTCTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGT
* * * * * * **
201358 AGGGATCTTCATTCATTTCGTGATTAGGCACTATAAATACATTTTCCTCTTTAGGATAAATGATA
128 AAGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATA
* * * * *
201423 TTTATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCTTATTTTCCTCAAAATCAAATTTTGTA
193 TTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTA
* * * * * **
201488 CTTTAAATAAGACATGCATTGATTCTCATAAAAGTCTCCATTCTTTTCAACATTGGGAATTAAAA
258 CTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAA
* * * * * *** *
201553 ACACATTCCTTTTATTAGGATACAAGACATTGATGTTTTAGTGGAACAATAGAAGCTTTTCTTTC
323 ACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTC
* * * *
201618 C-ACTATTATTGATAGAATCAAAGTTTCTCTCTTAAATAAGACAAACATGAATACTCATACTAAT
388 CAAC-GTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAAT
* * *
201682 CTACATTCTTTTCTGGATTAGCCA
452 CCACTTTCTTTTCTGGATTAGGCA
* * * * * *
201706 CCATAAATAAAGTCTTCTAATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAACACTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * * * * *
201771 CTTCCCACCAATTTTTGTAAA-TTCTAATTTCGA-GCCCCAAATGAGACAAGCATGGATTCTAGT
65 CTTCCCACCAATTTTTGAAAAGTAC-AAGTTC-ATTCCTCAAATGAGACAAACATGGATTCTAGT
* * * * * *
201834 AAGGATCTTCATCCATTTCATGATTAAGCACTATAAACACATTCTACTCATTAGGATAAATGATA
128 AAGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATA
* * ** * *
201899 TTCATGGTTTTCTTTAGTGTGGCAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGCTTGTA
193 TTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTA
** * * * * *
201964 CTTTAAATGAGACCTGCATTGATTCCCATAAAAGTCTCCATTTTTTTCAAGATTGCGAACCAAAA
258 CTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAA
* * * * *
202029 TCACATACCCTTCATTAGGATACATGACATTGATGCTGTGGTGTCGCAAGAGAAGCTGTTC-TCC
323 ACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTC
* * * * * * * * *
202093 GCACCATTATTGATAGAATCAAAG-TTGACCCTAAAATAAGGCAAATATGAATACTCATACTAAT
388 -CAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAAT
* * * **
202157 CCCCATTCCTTTCAAGATTAGGCA
452 CCACTTTCTTTTCTGGATTAGGCA
* * * * * * * * * * **
202181 CCATAAACAAAATTTGTCTCTTAAATAGGACAAAGAGGAATACTCACACTAATCCCATTCTTTTC
1 -CATAAACATAGTCT-TCTC--ATA-AGG--ATACATG-ATA-T----C-GAT-GCTTTGGTTTC
* * * ** * * * * * * **
202246 --AGGATTAGGC-ACCAT--AAACAATGTCTTCT-AATAAGGATA-AATGATATTGATGCTTTGG
51 GTAAGA-AACGCTTTCTTCCCACCAAT-T-TT-TGAA-AA-G-TACAA-G---TTCATTC-CTCA
** * * *** *** * * * * * *
202304 TTTCGCGAGAAACACT---TTCTTCCCACCAAT-TT-TTGTAAATTCAAAT-G-TCGTGCCCCA-
104 AAT-GAGACAAACA-TGGATTC-TAGTAAGGATCTTCAT-TCATTTC--ATGGTTAG-GCACTAT
** ****** * * *** * * *
202361 AATGACACAAGCATGGATTCTA-G-TAAA-GATCTTCATTCATTTCATGATTAGGCCCTATAGAC
162 AA--ACACATTC-TCCCCAATAGGATAAATGATATTGATGGTTTTC-T--TT-TG-CC--TGGAA
* * * ** *** * * * * ** *** *
202423 A-C-ATTCTTTTCATTAGGATAAATGATATTGATGGTTT-T-CTTTTGCGTGA-A-AATC-TT--
217 ATCTTTTCTTTGCCTTA-TTTTCCTTAAAATCAAAGTTTGTAC-TTTAAATGAGACAAGCATTGA
* **** * *** * * * * * **
202479 TTCTTTGCCTTA-TTTACC-TTAAAATCAAAG-TT-TGTACTTTAAATGAGACATAGTTGATTCT
280 TTC-TCGTAAAAGTCT-CCATT-CTTTCCAAGATTGGGAAC--CAAA--A-ACACA-TT--CCCT
* ** ** * * * * * * * * *
202540 CGCAAAAGTCTCCACT--CTTTTCAAG-ATTGG-GAAC-CAA-A-AACACATTCCTTT-C-A--T
334 -TCATTAGGATACA-TGAC-ATTGATGCTTTGGTG-TCGCAAGAGAA-GCTTTTCTTTCCAACGT
* ** * ** * * *** * * *
202594 TA-GGATACATGACATTGATGCTTTGGTGC-CGCAAGAGAAGCTTTTCTTTCCATCG-TTATTGA
394 TATTGATA-A--A-ATCAAAG-TTT-GT-CTCTTAA-ATAAG----AC-AAACAT-GAATAGTCA
* * * * ** * *
202656 TA-GAATCAAAGTTGTC-TCT-TAAATAAGACAAA
445 TACTAATC-CACTT-TCTTTTCTGGATTAGGC--A
* * * ** * ** *
202688 CATGAATACTCATACTAATCCCCATTCT-TTCCAGGATTAGGCACCATAAAC-ATAGC---CATC
1 CAT-AA-A--C--A-TAGT---C-TTCTCAT-AAGGA-TA--CATGAT-ATCGAT-GCTTTGGTT
* * * * * * * * * * ***
202748 TCATAAGGATAC-ATGATCTT--GATGC-TTTGGTTTCACAGGATACGCTTTC-TTCC-CACCAA
49 TCGTAA-GAAACGCT-TTCTTCCCA-CCAATT--TTTGAAAAG-TACAAGTTCATTCCTCA--AA
* ** * * * *
202807 GTTTTGTAAGGTATGAGTTCATTG-CTCAAATGAGACAAACATGGATTCTTGTAGGGATCTTCA-
106 ----TG--A-G-A-CA-AACATGGATTC---T-AG---TA-A-GGA-TC-T-T---CA--TTCAT
* ** * * **** *
202870 TTCATTTCGTGATTAGGTACTATAAACACATTTTCCTTTTTAGGATAAATGATATTTATGGTTTT
144 TTCA--T-G-GTTAGGC-ACTATAAACACATTCTCCCCAATAGGATAAATGATATTGATGGTTTT
* * * * *
202935 CTGTTGCATGGAAATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTCTAAATGAG
204 CTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAG
* * * * * * **
203000 ACATGCGTTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTTGGAACCAAAAAAACATTCTTT
269 ACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAACACATTCCCT
* * *
203065 TCATTAGGATACATGACATGGATGCTTTGGTGCCGCAAGAGAAGCTTTTCTTTCCACCGTTATTG
334 TCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCAACGTTATTG
* * * *
203130 ATAGAATCAAAG-TTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTT
399 ATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCACTTTCTTTT
*
203194 CAGGATTAGGCA
464 CTGGATTAGGCA
* * * ** * *
203206 CCATAAACATAGCCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCACAGGATACGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * ** * * * *
203271 CTTCCCACCAATTTTTGTAAGGTATGAGTTCATTGCTCAAATGAGACAAACATGGATTCTTGCAG
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA
* * * **** *
203336 GGATCTTCATTCATTTCGTGATTAGGTACTATAAACACATTCTCCTTTTTAGAATAAATGATATT
130 GGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATT
* * * * ** * * *
203401 TATGGTTTTCTTTTGCATGGGAAGCTTTTCTTTTTCATATTTTCCTTAAAATGAAAGTTTATACT
195 GATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACT
* * * * * * *
203466 CTAAATGAGACATGCGTTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTTGGAACCAAAAAA
260 TTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAAC
** *
203531 ACATTCTTTTCAGTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCA
325 ACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCA
* * * * * * *
203596 CCATTACTGATAGAACCAAAG-TTGTCTCTTAAATACGGA-AAAAATGAAT-GCTCATACTAATC
390 ACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATA-AGACAAACATGAATAG-TCATACTAATC
* * *
203658 CCCATTCCTTTCAT-GATTAGGCA
453 CACTTTCTTTTC-TGGATTAGGCA
* * * * *
203681 CCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCGCAGGATACGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * ** * * *
203746 TTTCCCCACC-ATTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGACAAACATGGATTCTTGTA
65 CTT-CCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTA
* * * * * **** *
203810 CGGATCTTCATTCATTTCGTGATTAGGTATTATAAACACATTCTCCTTTTTCGGATAAATGATAT
129 AGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATAT
* * ** * *
203875 TTATGGTTTTCTTTTGCATGGAAATCTTTTCTTTATCATATTTTCCTTAAAATCAAAGTTTGTAT
194 TGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTAC
* * * * *
203940 TTTAAATGAGGCATGCGTTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAA
259 TTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAA
*** *
204005 CACATTAATTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCT
324 CACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
* * * * * * *
204070 ACCATTACTGATAGAACCAAAG-TTGTCTCTTAAATACGGA-AAAAATGAAT-GCTCATACTAAT
389 AACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATA-AGACAAACATGAATAG-TCATACTAAT
* * * **
204132 CCCCATTCCTTTCAAGATTAGGCA
452 CCACTTTCTTTTCTGGATTAGGCA
* * * * * * * * *
204156 CCATAAACATAATCTTCTTATAAGGGTATATGACCT-TAG-TTCTTTGGTTTCGCAGGATACGCT
1 -CATAAACATAGTCTTCTCATAAGGATACATGA--TATCGATGCTTTGGTTTCGTAAGAAACGCT
* ** * *
204219 TTCTTCCCACCAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAAACAAACATGGATTCT--T
63 TTCTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGT
* * * * * ***
204282 ACAGAGATCTTCATTCATTTCGTGATTAGGCGCAATAAACACATTATTCTCCTC-A-AGG-CGCA
128 A-AG-GATCTTCATTCATTTCATGGTTAGGCACTATAAACAC---ATTCTCCCCAATAGGATAAA
* * *
204344 TGATATTGA-----TTCTTTTGCGT-GAAATCTTTTCTTTGCCTCACTTTCCTTAAAATCAAAGT
188 TGATATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGT
* * * * * * *
204403 TTGTATTTTAAATTAGGCATGCATTGATTCTCGTAAAAGTCTCCATTCTATCCTAGATTGGAAAC
253 TTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAAC
* *
204468 CAAAAACACATTCTCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTT
318 CAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTT
* * * * * * * * *
204533 CTTTCCAACGTAATCGATAAAATCAAAATTTGTCTCCTAAATAGGACAAAGAGGAATACTCACAC
383 CTTTCCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATAC
* *
204598 TAATCC-CATTCTTTTCAGGATTAGGCA
448 TAATCCACTTTCTTTTCTGGATTAGGCA
* * * ** *
204625 CCATAAACA-ATGTCTTCTAATAAGGATAAATGATATTGATGCTTTGGTTTCGCGAGAAACACTT
1 -CATAAACATA-GTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTT
* * * * * * * *
204689 TCTTCCCACCAATTTTTGTAAA-TTCAAATTTCGTGCCCCAAATGACACAAGCATGGATTCTAGT
64 TCTTCCCACCAATTTTTGAAAAGTAC-AAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGT
* * *** * *
204753 AAAGATCTTCATTCATTTCA-GGATTAGGCACTATAGACACATTCTTTTCATTAGGATAAATGGT
128 AAGGATCTTCATTCATTTCATGG-TTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGAT
* * *
204817 ATTGATGGTTTTCTTTTGCGTGAAAATCTTTTCTTTGCCTTATTTACCTTAAAATCAAAGTTTGT
192 ATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGT
* * * * *
204882 ACTTTAAATGAGACATGCGTTGATTCTCGCAAAAGTCTCCACTCTTTTCAAGATTGGGAACCAAA
257 ACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAA
* * *
204947 AACACGTTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGCCGCAAGAGAAGCTTTTCTTT
322 AACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTT
* * *
205012 CCACCGTTATTGATAGAATCAAAG-TTGTCTCTTAAATAAGACAAACATGAATACTCATACTAAT
387 CCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAAT
* ** * ***
205076 CCCCACTCCTTTAAAGATTAGGCA
452 CCACTTTCTTTTCTGGATTAGGCA
* * * * * * *
205100 CCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCGCAGGATACACTTC
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* ** * * *
205165 CTTCCC-CACAATTTTTGTAAAGTATGATTTCATTGCTCAAATGAGACAAACATAGATTCTTA-T
65 CTTCCCAC-CAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTC-TAGT
* * * * * * **
205228 AGGGATATTCATTCATTTCGTGATTAGGCACTATAAACACATTCACCTCTTTAGGATAAATGATA
128 AAGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATA
*
205293 GTT-ATGGTTTAT-TTTT-CCTTGGAAATCTTTTCTTTATCAC-T-TTTTCCTTAAAATCAAAGT
193 -TTGATGGTTT-TCTTTTGCC-TGGAAATCTTTTCTTT-GC-CTTATTTTCCTTAAAATCAAAGT
* * * * * *
205353 TTGTACTTTAAAAGAGACATGCATTGATTCTTGCAAAAGTCTCCATTCTTTTCAAGTTTGGGAAC
253 TTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAAC
* *** * *
205418 GAAAAACACATTAATTTCATTAGTATACATGACATTGATGCTTTGGTGTCGCAAGAGAAACTTTT
318 CAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTT
* * * *
205483 CTTTCCACCGTTATTGATAGAATCAAAG-TTGTCTCTTAAATACGGA-AAAAATGAA-AGCTCAT
383 CTTTCCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATA-AGACAAACATGAATAG-TCAT
* * *
205545 ACTAATCCGCATTCCTTTCAT-GATTAGGCA
446 ACTAATCCACTTTCTTTTC-TGGATTAGGCA
* * * * * *
205575 CCATAAACATAGTCTTCTCATAGGGATACATGATCTTGATGCTTTGGTTTCGCAGGATACGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * ** * * *
205640 TTTCCCCACC-ATTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGACAAACATGGATTCTTGTA
65 CTT-CCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTA
* * * * ** *
205704 GGGATCTTCATTCATTTCGTGATTAGGTACTATAAACACATT-TCCCTCTTTAGGATAAACGATA
129 AGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCC-CAATAGGATAAATGATA
* * * * * *
205768 TTTATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCATAAAATCAAAATTTGTA
193 TTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTA
* * * * *
205833 CTCTAAATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTTGGAACCAAAA
258 CTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAA
* * * *
205898 AAACATT-CTTTACATTAGGATACATGAGATTGATGCTTTGGCGTCGCAAGAGAAGCTTTTCTTT
323 ACACATTCCCTT-CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTT
* * * * * * * *
205962 CCACCATTACTGCTAGAACCAAAG-TTGTCTCTTAAATACGGA-AAAAATGAAT-GCTCATACTA
387 CCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATA-AGACAAACATGAATAG-TCATACTA
* * *
206024 ATCCCCATTCCTTTCAT-GATTAGGCA
450 ATCCACTTTCTTTTC-TGGATTAGGCA
* * ** * *
206050 CCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCACAGGATACGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * * ** * * * *
206115 TTTCCTCACC-TTTTTTGCAAAGTATGAGTTCTTTGCTCAAATGAGATAAACATGGATTCTTGTA
65 CTTCC-CACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTA
* * * * * **
206179 GGGATCTTCATTCATTTCGTGATTAGGTACTATAAACACATTCTCCTCTTTAGGATAAATGATAT
129 AGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATAT
* * * *
206244 TTATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTAC
194 TGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTAC
* * * *
206309 TTTAAATGAGACATGCATTGATTCTTGCAAAAGTCTTCATTCTTTCCAAGATTGGGAACCAAAAA
259 TTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAA
**
206374 CACATTCATTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
324 CACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
* * * * *
206439 ACCGTTATTGATAGAATCAAAG-TTGTCTCTTAAATAAAACAAATATGAATACTCATACTAATCC
389 AACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCC
* *
206503 A-TATTC-CTTCAGGATTAGGCA
454 ACT-TTCTTTTCTGGATTAGGCA
* * * * *
206524 CCATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTT-GTCTTCGCAGGATACGTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGT-TTCGTAAGAAACGCTT
* * ** * * * *
206588 TTTTCCC-CACAATTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGACAAACATAGATTCTTGT
64 TCTTCCCAC-CAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGT
* * * * * * **
206652 AGGGACCTTCATTCATTTCGTGATTAGGCACTGTAAACACATTCTCCTCTTTAGGATAAATGATA
128 AAGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATA
* *
206717 GTT-ATGGTTTTCTTTTGCTTGGAAATCTTTTCTTTATCAC-T-TTTTCCTTAAAATCAAAGTTT
193 -TTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTT-GC-CTTATTTTCCTTAAAATCAAAGTTT
* * * *
206779 GTACTTTAAATGAGACATGCATTGATTCTTGCAAAAGTCTCCATTCTTTCCAAGATCGGGAACCA
255 GTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCA
** * *
206844 AAAACACATTCATTTCATTAGGATACATGACATTGATGCTTTGGTGTTGCAAGAGAAACTTTTCT
320 AAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCT
* * * * * *
206909 TTCCACCGTTATTGATAGAATCAAAG-CTGTCTCTTAAATAAGGCAAATATGAATACTCATACTA
385 TTCCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTA
* * *
206973 ATCCACATTC-CTTCAGGATTAGGCA
450 ATCCACTTTCTTTTCTGGATTAGGCA
* * * * ** * *
206998 CCATATACATAGTCTTCTCAGAAGGATACATGATCTTGATGCTTTGGTTTCACAGGATACGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * ** * * * * *
207063 CTTCCCACCAATTTTTGTAAGGTATGAGTTCATTGCTCAAATAAGACAAACATGGACTCTTGTAG
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA
* * ** ****
207128 GGATCTTCATTCATTTCGTGATTAGATACTATAAACACATTCTCCTTTTTAGGATAAATGATATT
130 GGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATT
* * * * *
207193 TATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCTTCAAATCAAAGTTTGTACT
195 GATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACT
* * ** * * * *
207258 CTAAATGAGACATGCGCTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTTGGAACCAAAAAA
260 TTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAAC
**
207323 ACATTCTTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCA
325 ACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCA
* * * * *
207388 CCATTACTGATAGAACCAAAG-TTGTCTCTTAAATACAG--AAACAATGAAT-GCTCATACTAAT
390 ACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATA-AGACAAAC-ATGAATAG-TCATACTAAT
* * *
207449 CCCCGTTCCTTTCAT-GATTAGGCA
452 CCACTTTCTTTTC-TGGATTAGGCA
* * * * *
207473 CCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCGCAGGATACGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * * ** * *
207538 TTTCCCCACC-ATTTTTGTAAAGCATGAGTTCTTTGCTCAAATGAGACAAACATGGATTCTTA-T
65 CTT-CCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTC-TAGT
* * * * * * **
207601 AGGGATCTTCATTCATTTCGTGATTAGGTACAATAAACACATTCTCCTCTTTAGGATAAATGATA
128 AAGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATA
* * * *
207666 TTTATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTA
193 TTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTA
* * ** * * * *
207731 TTTTAAATGAGGCATTCGTTGATTCTCGCAAAAGTCTCTATTCTTTTCAAGATTGGGAACCAAAA
258 CTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAA
*** *
207796 ACACATTAATTTTATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTC
323 ACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTC
* * * * * * * *
207861 CACCATTACTGATAGAACCAAAG-TTGTCTCTTAAATACGGA-AAAAATGAATGGTCATACTAAT
388 CAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATA-AGACAAACATGAATAGTCATACTAAT
* * * **
207924 CCCCATTCCTTTCAAGATTAGGCA
452 CCACTTTCTTTTCTGGATTAGGCA
* * ** * * * * * *
207948 CCATAAACATAATCTTCTCATAAGGATATATGACCTTGGTTCTTTGGTTTCGCAGGATACGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* ** * *
208013 CTTCCCACCAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAAACAAACATGGATTCT--TAC
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTA-
* * * * ***
208076 AGAGATCTTCATTCATTTC-GGGATTAGGCGCAATAAACACATTATTCTCCTC-A-A-GACGCAT
129 AG-GATCTTCATTCATTTCATGG-TTAGGCACTATAAACAC---ATTCTCCCCAATAGGATAAAT
* * * * *
208137 GATATTGATGGTTTTCTTTTGCGT-GAAATCTTTTCTTTGACTCACTTTCGTTAAAATCAAAGTT
189 GATATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTT
* * * * * * *
208201 TGTATTTTAAATTAGGCATGCATTGATTCTCGTAAAAGTCTCCATCCTTTCCTAGATTGGAAACC
254 TGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACC
*
208266 AAAAACACATTCTCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTC
319 AAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTC
* * * * * * *
208331 TTTCCACCGTTACTGATAGAACCAAAG-TTGTCTTTTAAATACGGA-AAAAATGAAT-GCTCATA
384 TTTCCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATA-AGACAAACATGAATAG-TCATA
* * *
208393 CTAATCCCCATTCCTTTCAT-GATTAGGCA
447 CTAATCCACTTTCTTTTC-TGGATTAGGCA
* * * * * * *
208422 CCAAAAACATAGTCTTCTCATAAGTATACATGATCTTGATGCTTTGGTTTCGCAGGATACGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * ** * * *
208487 TTTCCCCACC-ATTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGACAAACATGGATTCTTGTA
65 CTT-CCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTA
* * * * ** *
208551 GGGATCTTCATTCATTTCGTGATTAGGTACTATAAACACATT-TCCCTCTTTAGGATAAACGATA
129 AGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCC-CAATAGGATAAATGATA
* * * * * *
208615 TTTATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCATAAAATCAAAATTTGTA
193 TTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTA
* * * * *
208680 CTCTAAATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTTGGAACCAAAA
258 CTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAA
* *
208745 AAACATTCTCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTC
323 ACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTC
* * * * * * *
208810 CACCATTACT-ACTAGAACCAAAG-TTGTCTCTTAAATATGGA-AAAAATGAAT-GCTCATACTA
388 CAACGTTATTGA-TAAAATCAAAGTTTGTCTCTTAAATA-AGACAAACATGAATAG-TCATACTA
* * *
208871 ATCCCCATTCCTTTCAT-GATTAGGCA
450 ATCCACTTTCTTTTC-TGGATTAGGCA
* * ** * * *
208897 CCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCACAGGATATGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * * ** * * * *
208962 TTTCCTCACC-TTTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGATAAACATGGATTCTTGTA
65 CTTCC-CACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTA
* * * * * * **
209026 GGGATCTTCATTCATTTCGTGATTAGGTACTGTAAACACATTCTCCTCTTTAGGATAAATGATAT
129 AGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATAT
* * * *
209091 TTATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTAC
194 TGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTAC
* * * * **
209156 TCTAAATGAGACATGCGTTGATTCTCGCAAAAGTCTCCATTCTTTTGAAGATTGGGAACCAAAAA
259 TTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAA
* **
209221 AACATTCTTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
324 CACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
* * * * *
209286 ACCGTTATTGATAGAATCAAAG-TTGTCTCTTAAATAAAACAAATATGAATACTCATACTAATCC
389 AACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCC
* *
209350 A-TATTC-CTTCAGGATTAGGCA
454 ACT-TTCTTTTCTGGATTAGGCA
* * * * * * *
209371 CCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGCTTCGCAGGATACGTTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * ** * * * *
209436 TTTCCC-CACAATTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGACAAACATAGATTCTTGTA
65 CTTCCCAC-CAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTA
* * * * * **
209500 GGGACCTTCATTCATTTCATGATTAGGCACTGTAAACACATTCTCCTCTTTAGGATAAATGATAT
129 AGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATAT
* * * *
209565 TTATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTAC
194 TGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTAC
* * * * * *
209630 TTTAAATGAGACATGCGTTGATTCTCGCAAAAGTCTCCATTCTTTTCAATATTGGTAACCAAAAA
259 TTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAA
**
209695 CACATTCATTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
324 CACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
* * * * * *
209760 ACCATTATTGATAGAATCAAAG-TTGTCTCTTAAATAAGATAAATATGAATACTCATACTAATCC
389 AACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCC
* * *
209824 ACATTC-CTTCAGGATTAGGCA
454 ACTTTCTTTTCTGGATTAGGCA
* * * * * * *
209845 CCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGCTTCGCAGGATACGTTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACG-CTT
* * ** * * * *
209910 TTTTCCC-CACAATTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGACAAACATAGATTCTTGT
64 TCTTCCCAC-CAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGT
* * * * * **
209974 AGGGACCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATA
128 AAGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATA
* * * *
210039 TTTATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTA
193 TTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTA
* * ** * * * *
210104 TTTTAAATGAGGCATTCGTTGATTCTCGCAAAAGTCTCTATTCTTTTCAAGATTGGGAACCAAAA
258 CTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAA
*** *
210169 ACACATTAATTTTATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTC
323 ACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTC
* * * * * * * *
210234 CACCATTACTGATAGAACCAAAG-TTGTCTCTTAAATACGGA-AAAAATGAATGGTCATACTAAT
388 CAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATA-AGACAAACATGAATAGTCATACTAAT
* * * ***
210297 CCCCATTCCTTTAAAGATTAGGCA
452 CCACTTTCTTTTCTGGATTAGGCA
* * ** * * * * * *
210321 CCATAAACATAATCTTCTCATAAGGATATATGACCTTGGTTCTTTGGTTTCGCAGGATACGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* ** * *
210386 CTTCCCACCAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAAACAAACATGGATTCT--TAC
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTA-
* * * * ***
210449 AGAGATCTTCATTCATTTC-GGGATTAGGCGCAATAAACACATTATTCTCCTC-A-A-GACGCAT
129 AG-GATCTTCATTCATTTCATGG-TTAGGCACTATAAACAC---ATTCTCCCCAATAGGATAAAT
* * * * *
210510 GATATTGATGGTTTTCTTTTGCGT-GAAATCTTTTCTTTGACTCACTTTCGTTAAAATCAAAGTT
189 GATATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTT
* * * * * *
210574 TGTATTTTAAATTAGGCATGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCTAGATTGGAAACC
254 TGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACC
*
210639 AAAAACACATTCTCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTC
319 AAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTC
* * * * * * *
210704 TTTCCACCGTTACTGATAGAACCAAAG-TTGTCTTTTAAATACGGA-AAAAATGAAT-GCTCATA
384 TTTCCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATA-AGACAAACATGAATAG-TCATA
* * *
210766 CTAATCCCCATTCCTTTCAT-GATTAGGCA
447 CTAATCCACTTTCTTTTC-TGGATTAGGCA
* * * * * * * *
210795 CCAAAAACATATTCTTCTCATAAGTATACATGATCTTGATGCTTTGGTTTCGCAGGATACGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * ** * * *
210860 TTTCCCCACC-ATTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGACAAACATGGATTCTTGTA
65 CTT-CCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTA
* * * * ** *
210924 GGGATCTTCATTCATTTCGTGATTAGGTACTATAAACACATT-TCCCTCTTTAGGATAAACGATA
129 AGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCC-CAATAGGATAAATGATA
* * * * * *
210988 TTTATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCATAAAATCAAAATTTGTA
193 TTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTA
* * * * *
211053 CTCTAAATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTTGGAACCAAAA
258 CTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAA
* *
211118 AAACATTCTCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTC
323 ACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTC
* * * * * * *
211183 CACCATTACT-ACTAGAACCAAAG-TTGTCTCTTAAATATGGA-AAAAATGAAT-GCTCATACTA
388 CAACGTTATTGA-TAAAATCAAAGTTTGTCTCTTAAATA-AGACAAACATGAATAG-TCATACTA
* * *
211244 ATCCCCATTCCTTTCAT-GATTAGGCA
450 ATCCACTTTCTTTTC-TGGATTAGGCA
* * ** * *
211270 CCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCACAAGATATGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * * ** * * * *
211335 TTTCCTCACC-TTTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGATAAACATGGATTCTTGTA
65 CTTCC-CACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTA
* * * * * * **
211399 GGGATCTTCATTCATTTCGTGATTAGGTACTGTAAACACATTCTCCTCTTTAGGATAAATGATAT
129 AGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATAT
* * * *
211464 TTATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTAC
194 TGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTAC
* * * * **
211529 TCTAAATGAGACATGCGTTGATTCTCGCAAAAGTCTCCATTCTTTTGAAGATTGGGAACCAAAAA
259 TTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAA
* ** *
211594 AACATTCTTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAGGAGAAGCTTTTCTTTCC
324 CACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
* * * * * *
211659 ACCGTTATTGATAGAATCAAAG-TTGTCTCTTAAGTAAAACAAATATGAATACTCATACTAATCC
389 AACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCC
* *
211723 A-TATTC-CTTCAGGATTAGGCA
454 ACT-TTCTTTTCTGGATTAGGCA
* * * * * * *
211744 CCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGCTTCGCAGGATACGTTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * ** * * * *
211809 TTTCCC-CACAATTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGACAAACATAGATTCTTGTA
65 CTTCCCAC-CAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTA
* * * * * **
211873 GGGACCTTCATTCATTTCATGATTAGGCACTGTAAACACATTCTCCTCTTTAGGATAAATGATAT
129 AGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATAT
* * * *
211938 TTATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTAC
194 TGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTAC
* * * * * *
212003 TTTAAATGAGACATGCGTTGATTCTCGCAAAAGTCTCCATTCTTTTCAATATTGGTAACCAAAAA
259 TTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAA
**
212068 CACATTCATTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
324 CACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
* * * * * *
212133 ACCATTATTGATAGAATCAAAG-TTGTCTCTTAAATAAGATAAATATGAATACTCATACTAATCC
389 AACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCC
* * *
212197 ACATTC-CTTCAGGATTAGGCA
454 ACTTTCTTTTCTGGATTAGGCA
* * * * * * *
212218 CCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGCTTCGCAGGATACGTTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACG-CTT
* * ** * * * *
212283 TTTTCCC-CACAATTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGACAAACATAGATTCTTGT
64 TCTTCCCAC-CAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGT
* * * * * **
212347 AGGGACCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATA
128 AAGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATA
* * * *
212412 TTTATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTA
193 TTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTA
* * ** * * * *
212477 TTTTAAATGAGGCATTCGTTGATTCTCGCAAAAGTCTCTATTCTTTTCAAGATTGGGAACCAAAA
258 CTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAA
*** *
212542 ACACATTAATTTTATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTC
323 ACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTC
* * * * * * * *
212607 CACCATTACTGATAGAACCAAAG-TTGTCTCTTAAATACGGA-AAAAATGAATGGTCATACTAAT
388 CAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATA-AGACAAACATGAATAGTCATACTAAT
* * * * **
212670 CCCCATTCCTTCCAAGATTAGGCA
452 CCACTTTCTTTTCTGGATTAGGCA
* * ** * * * * * *
212694 CCATAAACATAATCTTCTCATAAGGATATATGACCTTGGTTCTTTGGTTTCGCAGGATACGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* ** * * *
212759 CTTCCCACCAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAAACAAACATGGATTCTTA-CA
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTC-TAGTA
* * * * * ***
212823 AAGATCTTCATTCATTTC-GGGATTAGGCGCAATAAACACATTATTCTCCTC-A-A-GACGCATG
129 AGGATCTTCATTCATTTCATGG-TTAGGCACTATAAACAC---ATTCTCCCCAATAGGATAAATG
* * * *
212884 ATATTGATGGTTTTCTTTTGCGT-GAAATCTTTTCTTTGCCTCACTTTCGTTAAAATCAAAGTTT
190 ATATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTT
* * * * * *
212948 GTATTTTAAATTAGGCATGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCTAGATTGGAAACCA
255 GTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCA
* *
213013 AAAACACATTCTCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCC
320 AAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCT
* * * * * * * *
213078 TTCCACCGTTACTGATAGAACCAAAG-TTGTCTTTTAAATACGGA-AAAAATGAAT-GCTAATAC
385 TTCCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATA-AGACAAACATGAATAG-TCATAC
* * *
213140 TAATCCCCATTCCTTTCAT-GATTAGGCA
448 TAATCCACTTTCTTTTC-TGGATTAGGCA
* * * * * *
213168 CCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCGCAGGATACGTTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * ** * * *
213233 TTTCCCCACC-ATTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGACAAACATGGATTCTTGTA
65 CTT-CCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTA
* * * * ** *
213297 GGGATCTTCATTCATTTCGTGATTAGGTACTATAAACACATT-TCCCTCTTTAGGATAAACGATA
129 AGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCC-CAATAGGATAAATGATA
* * * * *
213361 TTTATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCATAAAATCAAAGTTTGTA
193 TTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTA
* * * * *
213426 CTCTAAATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTTGGAACCAAAA
258 CTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAA
* * *
213491 AAACAATCTCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTC
323 ACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTC
* * * *
213556 CACCGTTATTGATAGAATCAAAG-TTGTCTCTTAAATAAAACAAATATGAAT-GCTCATACTAAT
388 CAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAG-TCATACTAAT
* *
213619 CCA-TATTC-CTTCAGGATTAGGCA
452 CCACT-TTCTTTTCTGGATTAGGCA
* * * * * * *
213642 CCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGCTTCGCAGGATACGTTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * ** * * * *
213707 TTTCCC-CACAATTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGACAAACATAGATTCTTGTA
65 CTTCCCAC-CAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTA
* * * * * * **
213771 GGGACCTTCATTCATTTCGTGATTAGGCACTGTAAACACATTCTCCTCTTTAGGATAAATGATAT
129 AGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATAT
* * * *
213836 TTATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTAC
194 TGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTAC
* * *
213901 TTTAAATGAGACATGCATTGATTCTTGCT-AAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAA
259 TTTAAATGAGACAAGCATTGATTCTCG-TAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAA
** * * *
213965 ACACATTCATTTCATTAGGATACATGGCATTGATGCTTTGGTGTCGCAGGAGAGGCTTTTCTTTC
323 ACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTC
* * * * *
214030 CACCGTTATTGATAGAATCAAAG-TTGTCTCTTAAATACGAAAAAAATGAAT-GTTCATACTAAT
388 CAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAG-TCATACTAAT
* ** * **
214093 CCCCACTCCTTTCAAGATTAGGCA
452 CCACTTTCTTTTCTGGATTAGGCA
* * * * * * *
214117 CCATAAACATAGTCTTCTCATAAGGATGCATGATCTTGATGCTTTGGTTTCGCAGGATACGCTTC
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* ** *
214182 CTTCCC-CACAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAGACAAACATGGATTCTTA-T
65 CTTCCCAC-CAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTC-TAGT
* * * * * * **
214245 AGGGATATTCATTCATTTCGTGATTAGGCACTGTAAACACATTCTCCTCTTTAGGATAAATGATA
128 AAGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATA
*
214310 GTT-ATGGTTTAT-TTTT-CCTTGGAAATCTTTTCTTTATCAC-T-TTTTCCTTAAAATCAAAGT
193 -TTGATGGTTT-TCTTTTGCC-TGGAAATCTTTTCTTT-GC-CTTATTTTCCTTAAAATCAAAGT
* * * * *
214370 TTGTACTTTAAATAAGACATGCATTGATTCTTGCT-AAAGTCTCCATTCTTTTCAAGTTTGGGAA
253 TTGTACTTTAAATGAGACAAGCATTGATTCTCG-TAAAAGTCTCCATTCTTTCCAAGATTGGGAA
* ** *
214434 CCGAAAACACATTCATTTCAATAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTT
317 CCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTT
* * * * * *
214499 TCTTTCCACCATTATTGATAGAATCAAAG-TTGTCTCTTAAATAAGATAAATATGAATACTCATA
382 TCTTTCCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATA
* * *
214563 CTAATCCACATTC-CTTCAGGATTAGGCA
447 CTAATCCACTTTCTTTTCTGGATTAGGCA
* * * *
214591 CCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCGTAGGATACGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * ** * * * *
214656 TTTCCC-CACAATTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGACAAACAAGGATTCTTGTA
65 CTTCCCAC-CAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTA
* * * * **
214720 GGGACCTTCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATAT
129 AGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATAT
* * **
214785 TTATGGTTTTCTTTTGCATGGAAATCTTTTC-TTGGTTATATTTTCCTTAAAATCAAAGTTTGTA
194 TGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCT-TATTTTCCTTAAAATCAAAGTTTGTA
* * * *
214849 CTTTAAATGAGACATGCGTTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAA
258 CTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAA
**
214914 ACACATTCATTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTC
323 ACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTC
* * * *
214979 CACCGTTATTGATAGAATCAAAG-TTGTCTCTTAAATAAAACAAATATGAAT-GCTCATACTAAT
388 CAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAG-TCATACTAAT
* *
215042 CCA-TATTC-CTTCAGGATTAGGCA
452 CCACT-TTCTTTTCTGGATTAGGCA
* * * * * * *
215065 CCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGCTTCGCAGGATACGTTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * ** * * * *
215130 TTTCCC-CACAATTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGACAAACATAGATTCTTGTA
65 CTTCCCAC-CAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTA
* * * * * * **
215194 GGGACCTTCATTCATTTCGTGATTAGGCACTGTAAACACATTCTCCTCTTTAGGATAAATGATAT
129 AGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATAT
* * * * *
215259 TTATGGTTTTCTTTTGCATGGAAATATTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTAC
194 TGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTAC
* * *
215324 TTTAAATGAGACATGCATTGATTCTTGCT-AAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAA
259 TTTAAATGAGACAAGCATTGATTCTCG-TAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAA
** * * *
215388 ACACATTCATTTCATTAGGATACATAACATTGACGCTTTGGTGTCGCAAGAGAAACTTTTCTTTC
323 ACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTC
* * * * * * *
215453 CACCGTTATTGATAGAATCAAAG-TTGTCCCTTAGATACGAAAAAAATGAA-AGCTCATACTAAT
388 CAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAG-TCATACTAAT
** * *
215516 CTGCATTCCTTTCAT-GATTAGGCA
452 CCACTTTCTTTTC-TGGATTAGGCA
* * * * * * *
215540 CCATAAACATAGTCTTCTCATAGGGATACATGATCTTGACGCTTTGGTTTCGCAGGATACGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * ** * * ** *
215605 CTTCCC-CATAATTTTTGTAAAGTATGAGTTCATTGCTCAAATAAGACAAACACAGATTCTTGTA
65 CTTCCCAC-CAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTA
* * * * * *
215669 GGGATCTTCATTCACTTCGTGATTAGGCACTTTAAACACATTCTCCTCC-TTAGGATAAATGATA
129 AGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCC-CCAATAGGATAAATGATA
* * *
215733 GTT-ACGGTTTTCTTTTGCTTGGAAATCTTTTCTTTATCAC-T-TTTTCCTTAAAATCAAAGTTT
193 -TTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTT-GC-CTTATTTTCCTTAAAATCAAAGTTT
* * *
215795 GTACTTTAAATGAGACATGCATTGATTCTTGCAAAAGTCTCCATTCTTTCCAAGATTGGGAACCA
255 GTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCA
**
215860 AAAACACATTCATTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCT
320 AAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCT
* * * *
215925 TTCC-ACGATTATTGATAGAATCAAAG-TTGTCTCTTAAATAAAACAAATATGAATACTCATACT
385 TTCCAACG-TTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACT
* *
215988 AATCCA-TATTC-CTTCAGGATTAGGCA
449 AATCCACT-TTCTTTTCTGGATTAGGCA
* * * * * * *
216014 CCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGCTTCGCAGGATACGTTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * ** * * * *
216079 TTTCCC-CACAATTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGACAAACATAGATTCTTGTA
65 CTTCCCAC-CAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTA
* * * ** * * **
216143 GGGACCTTCATTCATTTCGTTATTAGGCACTGTAAACACATTCTCCTCTTTAGGATAAATGATAG
129 AGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATA-
* * *
216208 TT-ATGGTTTTCTTTTGCTTAGAAATCTTTTCTTTATCAC-T-TTTTCCTTAAAATCAAAGTTTG
193 TTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTT-GC-CTTATTTTCCTTAAAATCAAAGTTTG
* * * *
216270 TACTTTAAATGAGACATGCATTGATTCTTGCAAAAGTCTCCATTCTTTCCATGATTGGGAACCAA
256 TACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAA
** * * *
216335 AAACACATTCATTTCATCAGGATACATGACATTGATGCTTTGGTGTCGCAACAGAAACTTTTCTT
321 AAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTT
* * * * * *
216400 TCCACCGTTATTGATAGAATCAAAG-CTGTCTCTTAAATAAGGCAAATATGAATACTCATACTAA
386 TCCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAA
* * *
216464 TCCACATTC-CTTCAGGATTAGGCA
451 TCCACTTTCTTTTCTGGATTAGGCA
* * * * ** * * *
216488 CCATATACATAGTCTTCTCATAAGGATACAGGATCTTGATGCTTTGGTTTCACAGGATACGTTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * ** * * *
216553 CTTCCCACCAATTTTTGTAAGGTATGAGTTCATTGCTCAAATGAGACAAACATGGATTCTTGTAG
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA
* * ** ****
216618 GGATCTTCATTCATTTCGTGATTAGATACTATAAACACATTCTCCTTTTTAGGATAAATGATATT
130 GGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATT
* * * *
216683 TATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACT
195 GATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACT
* * * * * * *
216748 CTAAATGAGACATGCGTTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTTGGAACCAAAAAA
260 TTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAAC
**
216813 ACATTCTTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCA
325 ACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCA
* * * * * * * * *
216878 CCATTACTGATAGAACCAAAG-TTGACTCTTAAATACGAAAAAAATGAAT-GCTCATACTAATCC
390 ACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAG-TCATACTAATCC
* *
216941 CCTTTCCTTTCAT-GATTAGGCA
454 ACTTTCTTTTC-TGGATTAGGCA
* * * *
216963 CCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCGTAGGATACGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * * *** * *
217028 TTTCCCCACC-ATTTTTGTAAAGCATGCGTTCTTTGCTCAAATGAGACAAACATGGATTCTTA-T
65 CTT-CCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTC-TAGT
* * * * * * **
217091 AGGGATCTTCATTCATTTCGTGATTAGGTACAATAAACACATTCTCCTCTTTAGGATAAATGATA
128 AAGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATA
* * * * * *
217156 TTTATGGTTTTCTTTAGCATGGAAATCTTTTCTTTGTCATATTTTCCTTAAAATCAAGGTTTGTA
193 TTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTA
* * * * * * *
217221 TTTTAAATGAGGCATGCGTTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTTGGAACCAAAA
258 CTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAA
* **
217286 AAACATTCTTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTC
323 ACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTC
* * * * * * * *
217351 CACCATTACTGATAGAACCAAAG-TTGTCTCTTAAATACGGA-AAAAATGAATGGTCATACTAAT
388 CAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATA-AGACAAACATGAATAGTCATACTAAT
* * * **
217414 CCCCATTCCTTTCAAGATTAGGCA
452 CCACTTTCTTTTCTGGATTAGGCA
* * ** * * * * * *
217438 CCATAAACATAATCTTCTCATAAGGATATATGACCTTGGTTCTTTGGTTTCGCAGGATACGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* ** * *
217503 CTTCCCACCAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAAACAAACATGGATTCT--TAC
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTA-
* * * * ***
217566 AGAGATCTTCATTCATTTCGTGATTAGGC-GTAATAAACACATTATTCTCCTC-A-A-GACGCAT
129 AG-GATCTTCATTCATTTCATGGTTAGGCACT-ATAAACAC---ATTCTCCCCAATAGGATAAAT
* * *
217627 GATATTGATGGTTTTCTTTTGCGT-GAAATCTTTTCTTTGCCTCACTTTCCTTAAAATCAAAGTT
189 GATATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTT
* * * * * *
217691 TGTATTTTAAATTAGGCATGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCTAGATTGGAAACC
254 TGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACC
*
217756 AAAAACACATTCTCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTC
319 AAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTC
* ** * * * * * * * *
217821 TTTCCAACGTAATCAATAAAATTGAAA-TTTGTTTCCTAAATAGGACAAAGAGGAATACTCACAC
384 TTTCCAACGTTATTGATAAAA-TCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATAC
* *
217885 TAATCC-CATTCTTTTCAGGATTAGGCA
448 TAATCCACTTTCTTTTCTGGATTAGGCA
* * * ** *
217912 CCATAAACA-ATGTCTTCTAATAAGGATAAATGATATTGATGCTTTGGTTTCGCGAGAAACACTT
1 -CATAAACATA-GTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTT
* * * * * * *
217976 TCTTCCCACCAATTTTTGTAAA-TTCAAATTTCCTGCCCCAAATGAGAAAAACATGGATTCTAGT
64 TCTTCCCACCAATTTTTGAAAAGTAC-AAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGT
* * * * ** *
218040 AAGGATCTTCATCCATTTCATGATTAGGCACCATAAACACATTCTTCTTATTAGGATAAATGATA
128 AAGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATA
* * * * *
218105 TTCATGTTTTTCTTTAGCGTGGTAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTA
193 TTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTA
** ** * * *
218170 CTTTAAACAAGACCTGCATTGATTCCCGTAAAAGTCTCCATTTTTTTCAAGATTGGGAACCAAAA
258 CTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAA
* * * * * * *
218235 TCACATACCCTTCCTTAGGATACAAGACATTGATGCTGTGGTGTCGCAAGAGAAGCTATTC-TAC
323 ACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTC
* * * * * *
218299 ACACCATTATTGATAGAATCAAAG-TTGTCCCTTAAATAAGACAAATATGAATACTCATACTAAT
388 -CAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAAT
* * * **
218363 CCCCATTCCTTTCAAGATTAGGCA
452 CCACTTTCTTTTCTGGATTAGGCA
* * ** * * * * * *
218387 CCATAAACATAATCTTCTCATAAGGATATATGACCTTGGTACTTTGGTTTCGTAGGATACGGTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* ** * * * *
218452 CTTCCCACCAATTTTTGTAAAGTATGAGTTAATTGCTCAAATGAGACAAACATGGATTCTTGTAG
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA
* * * * *
218517 GGACCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCT-CCTATTTAGGATAAATGATAT
130 GGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCA-ATAGGATAAATGATAT
* * * *
218581 TTATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCTTATTTTCCTTAAAATCAAAGTTTATAC
194 TGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTAC
* * *
218646 TTTAAATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAA
259 TTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAA
*** *
218711 CACATTAATTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCT
324 CACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
* * * * * * * *
218776 ACCATTATTGATAGAATCAAA-ATTGTCACTTAAATAAGACAAATATGAAAAATCATACTAATCC
389 AACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCC
* * *
218840 ACATTCCTTTCAGGATTAGGCA
454 ACTTTCTTTTCTGGATTAGGCA
* * * * * *
218862 CCATCAACATAGTTTTCTCATAAGGATACATGATCTTGATGCTTTGGTCTT-GCAAGATACGCTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGT-TTCGTAAGAAACGCTT
* ** ** * * *
218926 TCTTCCCACCAATTTTTGTAAAGTATGAGTTTGTTGCTCAAATGAGACAAACATGGATTCTTGCA
64 TCTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTA
* * * * **
218991 AGGATCTTTATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATAT
129 AGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATAT
* * * * *
219056 TTATGATTTTCTTTT-CCATGGAAATCTTTTCTTTGTCTTTTTTTTCTTAAAATCAAAGTTTGTA
194 TGATGGTTTTCTTTTGCC-TGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTA
* * * * * * *
219120 TTTTAAATGAGGCATGCGTTGATTCTCGTAAAAGTCTTCATTCTTTTCAAGATTGGCAACCAAAA
258 CTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAA
*** *
219185 ACACATTAATTTCATTAGGATGCATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTC
323 ACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTC
* * * * * *
219250 CACCATTATTGATAGATTCAAAG-TTGTCTCTTAAATAAGACAAACATGAAAACTCATACTAATC
388 CAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATC
* * *
219314 CCCATTCTTTTCGGGATTAGGCA
453 CACTTTCTTTTCTGGATTAGGCA
* * * * ** * *
219337 CCGTAAACATAGCCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCACAGGAGACGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * ** * * *
219402 CTTCCCACCAATTTTTGTAAGGTATGAGTTCATTGCTCAAATGAGACAAACACGGAGTT-TTGTA
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGA-TTCTAGTA
* ** * * * * **
219466 GGGATCTTCATTCATTTTGTGATTAGGCACTATAAGCATATTCTCCTCTTTAGGATAAATGATAT
129 AGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATAT
* * * * * *
219531 TTATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTTCTTAAAATCAAAGTTTGTGC
194 TGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTAC
* * * *
219596 TTTAAATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTTTTTTCAAGATTGGGAACCAAAAA
259 TTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAA
* *** * *
219661 GACATTAATTTCATTAGGATACAAGACATTGATGCTTTGGTGTCGCAAAAGAAGCTTTTCTTTCC
324 CACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
* * * * * * *
219726 ACCATTATTGATAGATTCAAAG-TTGTCACTTAAATAAGACAAATATGAATAATCATACTAATCC
389 AACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCC
* * *
219790 ACATTCCTTTCAGGATTAGGCA
454 ACTTTCTTTTCTGGATTAGGCA
* * * * * * *
219812 CCATCAACATTGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTTGCAAGATACGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * ** * * **
219877 CTTCCCACCAATTTTGGTAAAGTATGAGTTTATTGCTCAAATGAGACAAACATGGATTC-ATGCG
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTA-GTA
* * * * * * **
219941 GGGATCTTTATTCATTTCGTGATTAGGCACTATAAACACATTTTCCTCTTTAGGATAAATGATAT
129 AGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATAT
* * *
220006 TTATGGTTTTCTTTT-CCATGGAAATCTTTTCTTTGTCTTATTTTTCTTAAAATCAAAGTTTGTA
194 TGATGGTTTTCTTTTGCC-TGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTA
* * * * * *
220070 TTTTAAATGACG-CATGCGTTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGTTTGGGAACCAAA
258 CTTTAAATGA-GACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAA
***
220134 AACACATTAATTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTT
322 AACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTT
* * * * * *
220199 CCACCATTATTGATAGAATGAAAG-TTGTCTCTTAAATAAGACAAACATGAAAACTCATACTAAT
387 CCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAAT
* * *
220263 CCCCATTCTTTTCGGGATTAGGCA
452 CCACTTTCTTTTCTGGATTAGGCA
* * * * ** * * *
220287 CCATAAACATAGCCTTCTTATAAGGATACATGATCTTGATGCTTTGGTTTCACAGGAGACGGTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * * ** * ** * *
220352 TTTCCCACCAATTTTTGTAAGGTATGAGTTCATTGCTCACAA-GAGACAAACACAGATTTTTGTA
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCA-AATGAGACAAACATGGATTCTAGTA
* * * * * * **
220416 GGGATCTTCATTCATTTCGTGATTAGGCACTATAAGCATATTCTCCTCTTTAGGATAAATGATAT
129 AGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATAT
* * * *
220481 TTATGGTTTTCTTTTGCATGGTAATCTTTTCTTTGTCTTATTTTCCTTAAAATCAAAGTTTGTAC
194 TGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTAC
* * * *
220546 TTTAAATGAGACATGCGTTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAA
259 TTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAA
***
220611 CACATTAATTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
324 CACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
* * * * * * *
220676 ACCATTATTGATAGAATCAAA-ATTGTCACTTAAATAAGACAAATATGAATAATCATACTAATCC
389 AACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCC
* * *
220740 ACATTCCTTTCAGGATTAGGCA
454 ACTTTCTTTTCTGGATTAGGCA
* * * * * * *
220762 CCATCAACACAGTCTTCTCATAAAGATACATGATCTCGATGCTTTGGTTTTGCAAGATACGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* ** * * * *
220827 CTTCCCACCAATTTTTGTAAAGTATGAGTTTATTGCTCAATTGAGACAAACATGGATTC-ATGCA
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTA-GTA
* * * * * *
220891 GGGATCTTTATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATAT
129 AGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATAT
* * * *
220956 TTATGGTTTTCTTTT-CCATGGAAATCTTTTCTTTGTCTTTTTTTTCTTAAAATCAAAGTTTGTA
194 TGATGGTTTTCTTTTGCC-TGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTA
* ** * * *
221020 CTTTAAATAAGACATCCGTTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAA
258 CTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAA
***
221085 ACACATTAATTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTC
323 ACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTC
* * * * *
221150 CACCATTATTGATAGAATCAAAG-TTGTCTCTTCAAATAAGACAAACATGAAAACTCATACTAAT
388 CAACGTTATTGATAAAATCAAAGTTTGTCTCTT-AAATAAGACAAACATGAATAGTCATACTAAT
* * *
221214 CCCCATTCTTTTCGGGATTAGGCA
452 CCACTTTCTTTTCTGGATTAGGCA
* * * ** *
221238 CCATAAACATAGCCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCACAAGAGACGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * ** * * * * * *
221303 CTTCCCACCAATTTTTGTAAGGTATGAGTTCATTGCTCAAATGAGACAAACACGAATTTTTGTAG
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA
* * * * * **
221368 GGATCTTCATTCATTTCGTGATTAGGCACTATAAGCATATTCTCCTCTTTAGGATAAATGATATT
130 GGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATT
* * * * * *
221433 TATGGTTTTTTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTGCT
195 GATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACT
* * * *
221498 TTAAATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAAA
260 TTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAAC
*
221563 ACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCA
325 ACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCA
* * * * * *
221628 TCGTTATTGATAGAACCAAAG-TTGTCTCTTAAATAAGGCAAA-ATTAAATACTCATACTAATCC
390 ACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACA-TGAATAGTCATACTAATCC
* *
221691 CCATTTCTTTT-AGGATTAGGCA
454 AC-TTTCTTTTCTGGATTAGGCA
* * ** * *
221713 CCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCACAGGAGACGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * ** * * * * *
221778 CTTCCCACCAATTTTTGTAAGGTATGAGTTCATTGCTCAAATGAGACAAACACGGATTTTTGTAG
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA
* * * * *
221843 GGATCTTCATTCATTTCGTGATTAGGCATTATAAACACATTCTCCTC-TTCAGGATAAATGATAT
130 GGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAAT-AGGATAAATGATAT
* * * * *
221907 TTATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCTTATTTTCCTCAAAATCAAAGTTTCTAC
194 TGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTAC
* * * * * **
221972 TTTAAATAAGACATGCATTGATTCTCATAAAAGTCTCCATTCTTTTCAACATTGGGAATTAAAAA
259 TTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAA
** * * * ***
222037 CACATTCCCTTTTTTAGGATACAAGACATTGATGTTTTAGTGGAACAAGAGAAGCTTTTCTTTCC
324 CACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
* * * * * * *
222102 -ACTCTTATTGATAGAATCAAAGTTTCTCTCTCAAATAAGACAAACACGAATACTCACACTAATC
389 AAC-GTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATC
* *
222166 CACATTCTTTTCTAGATTAGGCA
453 CACTTTCTTTTCTGGATTAGGCA
* * * ** *
222189 CCATAAACAAAGTCTTCTAATAAGGATACATGATATTGATGCTTTGGTTTCACAAGAAACACTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * * * * * *
222254 CTTCCCACCAATTTTTGTAAA-TTCTAATTTGGA-GCCCCAAATGAGA-AAAGCAAGGATTCTAG
65 CTTCCCACCAATTTTTGAAAAGTAC-AAGTT-CATTCCTCAAATGAGACAAA-CATGGATTCTAG
* * * * ** *
222316 TAAGGATCTTCATCCATTTCTTGATTAGGCACTATAAACACATTCTTCTTATTAGGATAAATGAT
127 TAAGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGAT
** * * * * *
222381 ATTCTTGGTTTTCTTTCGCGTGGCAATTTTTTCTTTGCCTTATTTTCCTTAAAATTAAAGTTTGT
192 ATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGT
* ** * * *
222446 ACTTTAAATAAGACCTGCATTGATTCCCGTAAAAGTCTCCATTTTTTTCAAGATTGGGAACCAAA
257 ACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAA
* ** * * * * * *
222511 ATCACAAACCCTTCATTAGGATACAAGACATTGATGCTGTGGTGTCTCAAGTGAAGCTGTTC-TC
322 AACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTT
* * * * * * * *
222575 CGCACCATTATTGATAGAATCAAAG-TTGCCCCTTAAAGAAGACAAATATGAATACTCATACTAA
387 C-CAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAA
* * * **
222639 TCCCCATTCCTTTCAAGATTAGGCA
451 TCCACTTTCTTTTCTGGATTAGGCA
* * ** * * ** * * *
222664 CCATAAACATAATCTTCTCATAAGGATATATGACCTTGGTATTTTGGTTTCGTAGGATATGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* ** * * *
222729 CTTCCCACCAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAGACAAACATGGATTCTTGTAG
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA
* * * * * ** *
222794 GGACCTTCATTCATTTCGTGATTAGGCACTATAAACGCATTCTCCTCTTTAGGATTAATGATATT
130 GGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATT
* * * **
222859 TATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCTTATTTTTATTAAAATCAAAGTTTGTACT
195 GATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACT
* * * * *
222924 TTAAATGAGACATGCGTTGATTCTCGCAAAAGTCTCCATTCTTTTCAGGATTGGGAACCAAAAAC
260 TTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAAC
*** * *
222989 ACATTAATTTCATTACGATACATGACATTGATGCTTTGGTGTCGCAAGAGACGCTTTTCTTT-CA
325 ACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCA
* * * * *
223053 ACCATTATTGATAGAATCAAAG-TTGTCACTTAAATAAGACAAATATGAATAATCATACTAATCC
390 A-CGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCC
* * **
223117 ACATTCCTTTCAAGATTAGGCA
454 ACTTTCTTTTCTGGATTAGGCA
* * * * ** *
223139 CCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTTGCAAGTTACGTTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * ** * * *
223204 CTTCCCTCCAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAGACAAACATGGATTCTTGTAG
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA
* * ** *
223269 GGACCTTCATTCATTTCATGATTAGGCACTATAAACACATT-TCCCTCTTTAGGATAAACGATAT
130 GGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCC-CAATAGGATAAATGATAT
* * * * * * *
223333 TTAT-GCTTTCTTTTGCATAGAAATCTTTTCTTTGTCATATTTTCC-TAAAATCAAAGTTTGTAT
194 TGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTAC
* * * * *
223396 TTTAAATGAGGCATGCGTTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAA
259 TTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAA
*** *
223461 CACATTAATTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAAAGAAGCTTTTCTTTCC
324 CACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
* * * * * *
223526 ACCATTATTGATAGAATGAAAG-TTGTCTCTTAAATAAGACAAACATGAAAACTCATACTAATCC
389 AACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCC
* * *
223590 CCATTCTTTTCAGGATTAGGCA
454 ACTTTCTTTTCTGGATTAGGCA
* * * * * *
223612 CCATCAACATAGTCTTCTCATAAAGATACATGATCTCGATGCTTTGGTTTTGCAAGATACGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* ** * * * *
223677 CTTCCCACCAATTTTTGTAAAGTATGAGTTTATTGCTCAAATGAGGCAAACATGGATTC-ATGCA
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTA-GTA
* * * * * *
223741 GGGATCTTTATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATAT
129 AGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATAT
* * * * *
223806 TTATGGTTTTCTTTT-CCATGGAAATCTTTTCTTTGTCTTTTTTTTCTTAAATTCAAAGTTTGTA
194 TGATGGTTTTCTTTTGCC-TGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTA
* * * * *
223870 CTTTAAATAAGACATGCGTTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAA
258 CTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAA
*** *
223935 ACACATTAATTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAAAGAAGCTTTTCTTTC
323 ACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTC
* * * * *
224000 CACCATTATTGATAGAATCAAAG-TTGTCTCTTAAATAAGACAAACATGAAAACTCATACTAATC
388 CAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATC
* * *
224064 CCCATTCTTTTCGGGATTAGGCA
453 CACTTTCTTTTCTGGATTAGGCA
* * * ** *
224087 CCATAAACATAGCCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCACAAGAGACGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * ** * ** * * *
224152 CTTCCCACCAATTTTTGTAAGGTATGAGTTCATTACTCAAATGAGACAAACACAGATTTTTGTAG
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA
* * * * ** *
224217 GGACCTTCATTCATTTCGTGATTAGGCACTATAAACACATT-TGCCTCTTTAGGATAAACGATAT
130 GGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCT-CCCCAATAGGATAAATGATAT
* * * * * *
224281 TTATGGTTTTCTTTTGCATAGAAATCTTTTCTTTGTCATATTTTCCTAAAAATCAAAGTTTGTAC
194 TGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTAC
* * * * * *
224346 TCTAAATGAGACATGCGTTGATTCTCGCAAAAGTGTCCATTCTTTTCAAGATTGGGAACCAAAAA
259 TTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAA
*** *
224411 CACATTAATTTCATTAGGATACATGACATTGATTCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
324 CACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
* * * * *
224476 ACCATTATTGATAGAATCAAAG-TTGTCTCTTAAATAAGACAAATATGAATAATCATACTAATCC
389 AACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCC
* * *
224540 ACATTCCTTTCAGGATTAGGCA
454 ACTTTCTTTTCTGGATTAGGCA
* * * * ** **
224562 CCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTTGCAAGTTACATTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * ** * * * * * *
224627 CTTCCCTCCAATTTTTGTAAAGTATGAGTTTATTGCTCAAATGAGACAAACATGGATTATTGCAG
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA
* * * * **
224692 GGATCTTTATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATT
130 GGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATT
* * * * * *
224757 TATTGTTTTCTTTTGCGTGGAAATCTTTTCTTTGTCTTATTTTCCTTAAAATCGAAGTTTATACT
195 GATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACT
* * * ** * * * ** *
224822 TTAAATGAGACATGCATTGATTTTTCGCAGGA-TAC-GCTTTCTTCCCCATA-ATTTTTGTAAAG
260 TTAAATGAGACAAGCATTGA-TTCTCGTAAAAGT-CTCCATTCTT-TCCA-AGA---TTGGGAAC
* ** *** * * * * * * * * * *
224884 TATGAGTTCATT-GC-TCA-AATGAGACA-AACA-CGA---ATT-CT-T-GC-AG-GGATCTTCA
318 CAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTT--
* * * * * ***
224936 TTCATTT----CGTGATTAGGCACTATAAA-CACA-TTCT-CCTCTTTAGGATAAATGATATTTA
381 TTC-TTTCCAACGTTATT--G-A-TA-AAATCAAAGTT-TGTCTC-TTA-AAT-AA-GACAAACA
* ** ** * ** **
224994 TG-GTTTTC-TTTTGCATGGAAATCTTCTCTTTGTCAT--ATT-TTC-
435 TGAATAGTCATACT-AAT--CCA-CTT-TCTTT-TC-TGGATTAGGCA
* * * * * * * * * * *
225036 CTTAAAATCAAAGT-TTGTACTTTA--A-AC--GAGA-C-TTGCGTTGATTCTCGCAA-AAGTCT
1 CAT-AAA-CATAGTCTTCT-CATAAGGATACATGATATCGATGCTTTGGTT-TCGTAAGAA-AC-
* * * ** ** * * * *
225092 CCATTCGTT-TCA--AGA-TTGGGAATTAAAAACACA-TTC---CCTTTATTAGGATACAAGACA
60 GCTTTC-TTCCCACCA-ATTTTTGAA--AAGTACA-AGTTCATTCC-TCA-AATGAGACAA-ACA
* * * * * * * *
225149 TTGATGTTTTAGTGGAACAAGAGAAGCTGT--TT--TTTCCACT-ATTATTG-A-TAGAATCAAA
117 TGGA--TTCTAGT-----AAG-G-ATCT-TCATTCATTT-CA-TGGTTA-GGCACTATAAACACA
* * * ** * ** *
225207 GTTTCTCTCTCAAATAAGACAAACATGA-A-T-ACT--CATACTAAT-CC---ACATTCTTTTCT
169 --TTCTC-C-CCAATAGGA-TAA-ATGATATTGA-TGGTTTTCTTTTGCCTGGA-AATCTTTTCT
* * **** * * * * * * * * * *
225263 AT--ATTAGGCACCAT-AAA-CAAAGTCTTCTAATAAGGATACATGATATTGATGCTTTGGTT-T
226 TTGCCTTATTTTCCTTAAAATCAAAGT-TTGTACT----TTAAATGAGA--CAAGCATTGATTCT
* * * * * ** *
225323 CGCAAGAAACACTTTCTTCCCACCAATTTTTGTAAATTCTAA-TTTGGAGCCCCAAATGAGAAAA
284 CG---TAAA-A--GTC-T----CC-A---TTCT---TTCCAAGATTGG-GAACC-AA--A-AACA
*** * * * * * * * * * *
225387 GCA-TGGATTCTAGTAAGGATCTTCAT-CCATTTCATG-ATTAG-G-CACTATA-AACACATTCT
326 -CATTCCCTTC-A-TTAGGA--TACATGACA-TTGATGCTTTGGTGTCGCAAGAGAA-GC-TT-T
* * * * * * ** * *
225446 TCTTAT--TAGGATAAATGAT--ATTC-ATGATTT-TCT-TT--ATCGTGGC-AACCT---T--T
382 TCTT-TCCAACG-TTATTGATAAAATCAAAG-TTTGTCTCTTAAAT-AAGACAAACATGAATAGT
* * * *
225496 --T-CT-TTGC-C-TTATTTTC---CTTA---A
443 CATACTAATCCACTTTCTTTTCTGGATTAGGCA
* ** * * * * **
225517 AATCAAAGTTTGTACTT-TAAATAA-GACCTGCATTGAT-TCCCGTAAAAGTCTCAATTTTTTTC
1 CAT-AAACATAGT-CTTCT-CATAAGGA--TACA-TGATAT--CG---ATG-CT---TTGGTTTC
** * ** * ** * * * * ****
225579 AAGATTGGGAAC-CAAAATC-ACAAACC-CTTCATTAGGATACAAG-AC-A-TTGA-TGCTGTGG
51 --G-TAAGAAACGC--TTTCTTCCCACCAATT--TT-TGA-A-AAGTACAAGTTCATTCCTCAAA
* * * * * * * * ** *
225637 TGTCG-CAAGAGAAGCTG-TTCTCCGCACA--ATTATTGATAGAATCAAAGTTGTCCCTTAAATA
106 TG-AGACAA-ACATG--GATTCT-AGTA-AGGA-TCTTCAT----TC--A-TT-T--CAT-GGTT
* * * * * * * ** *** ** *
225698 AGACAAATATGAATACTCATACCAATCCCCATTCCTTTCAAGATTAGGCACCATAAACATAATCT
153 AGGC-ACTAT-AA-ACACAT-TC--TCCCCA-----AT-AGGA-TA--AATGATATTGATGGTTT
* ** * * *** * *
225763 TCTTAT--AAGGATATATGACCTTGGTACTT-TGGTTTCGTAGGATACGCTTTCTTCCCACCAAT
203 TCTTTTGCCTGGAAATCTTTTCTTTG-CCTTAT--TTT-----------C---CTT---A--AA-
* * * * * * * ** * *
225825 TTTTGTAAAGTATGAGTTCATTGCTCAAATGAGACAAACATGGATTCTTGT-AGGGACCTTCATT
245 --AT-CAAAGT-T-TGTAC-TT--T-AAATGAGACAAGCATTGATTCTCGTAAAAG-TCTCCATT
** * * * * * * *
225889 CATTT-CGTGATTAGGCACTATAAACACATTCTCC-T-ATTTAGGATAAATGATATTTATGGTTT
300 C-TTTCCAAGATTGGGAACCAAAAACACATTC-CCTTCA-TTAGGATACATGACATTGAT-G---
* * * * ** * ** *****
225951 TCTTTGTCTTATTTTC-CTTAAAATCAAAG-TTTGTACTTTAAATGAGACATGCGTTGATTCTCG
358 -CTTTG-----GTGTCGC--AAGA--GAAGCTTT-T-CTTT---CCA-ACGT-TATTGATAAAAT
* * * * * * *
226014 CAAAAGTCTCCCT-TTTTTTCAAGATTGGGAACCAAAAACACATTAAT-TTCATTAGGATACAT-
406 C-AAAGT-T---TGTCTCTT-AA-A-T---AA--GACAA-ACATGAATAGTCA-TA--CTA-ATC
* ** * *
226076 GACATTGATGCTT-TGG-TGT-CGCA
453 CAC-TTTCT-TTTCTGGAT-TAGGCA
* ** ** ** ** *** ** *
226099 -AGAGAAGC-TTTTCTT-TCCACCATTATTGATAGA-ATC-A-AAATT-GTCACTTAA-ATAA-G
1 CATA-AA-CATAGTCTTCT-CATAAGGATACAT-GATATCGATGCTTTGGTTTCGTAAGA-AACG
** * * ** ** * * * *
226155 ACAAAT-AT--GAATAA-TCAT-ACTAA-TCCACA-TTCATT--TCAGGATTAGGCACCATCAAC
61 -C-TTTCTTCCCACCAATTTTTGA-AAAGTACA-AGTTCATTCCTCA-AATGA-G-A-CA--AAC
** * * * ** * * * *
226211 ATAGTCTTCTCA-TAAGGATATATGA-TC-TTGATGCTTTGGTTTTGCA--AGATACGCTTTCTT
116 AT-GGATTCT-AGTAAGGATCT-TCATTCATT--T-C-ATGGTTAGGCACTATAAACACATTC-T
** * ***
226271 CCCACCAATTTTTG-TAAAGTATGAGTTTATTGCTCAAATGAGACAAACATGGATTCTTG-CTGG
173 -CC-CCAA--TAGGAT-AA--ATGA---TATTG-----ATG-G------TTTTCTT-TTGCCTGG
* * * ** ** * *
226334 -GATCTTTATTCATTT-CGTGATTAGGCAGTATAAA-CACA-TTCTCCT-CTTTAGGATAAATGA
215 AAATC-TT-TTC-TTTGCCTTATT-TTCCTTA-AAATCAAAGTT-T-GTAC-TT----TAAATGA
*** * ** ** * * * * * ** *** * * *
226394 TTTTTATGGTTTTCTTTTCCATGGAAA-TCT--TTTCTTTGTC-TTATT--TTTCTTAAAATCAA
268 --GACAAGCATTGATTCT-CGT-AAAAGTCTCCATTCTTT-CCAAGATTGGGAAC-CAAAAACAC
** * * * * * * * * *** ** *
226453 AGTT-TGTACTTTA-AAT-GA-GGCA-TG-TG--TTGATTCTCGCAAAAGTCTCCATTCTTTTCA
327 A-TTCCCTTCATTAGGATACATGACATTGATGCTTTG-GTGTCGCAAGAGAAGCTTTTCTTTCCA
* * * ** * * *** ** * * *
226510 A-G--ATTGGGAACCAAAAACACA-TTAATTTCATTAGGATACATGACATTGATGCTTTGGTGAC
390 ACGTTATT--G-A-TAAAATCAAAGTTTGTCTC-TTA-AATA-A-GACAAACATG-AATAGTCAT
* *** * *** *
226571 GC-AAGAGAAGCTTTTCTTTCCACCATTATTG-A
446 ACTAA-TCCA-C-TTTCTTTTCTGGATTA-GGCA
* * * * * * * ***** ** * ** * *
226603 TAGAATCAAAGT-TGTCTCTTAA--ATA-A-GACAAAC-ATG-AAAACTCACACT-A-ATCCCCA
1 CATAAACATAGTCT-TCTCATAAGGATACATGA-TATCGATGCTTTGGTTTC-GTAAGAAACGCT
** *** ** * * * * *
226659 TTCTTTTC-GGGA-TTAGGCACCATAA--ACATAG--CCTT-CTCATAAGGATACAGGATC-TTG
63 TTCTTCCCACCAATTTTTG-A--A-AAGTACA-AGTTCATTCCTCA-AATGAGACA--AACATGG
* * * **** * * ** * * *** *
226716 ATGCTTTGGTTTCAGAGGAGACGCTTTC-TTCCCACCAAT-TTTTGTAAGGTATGAGTTCATTGG
120 AT--TCTAG--T-A-A-G-GA-TC-TTCATTCATTTC-ATGGTTAGGCA-CTATAAACACATT-C
*** ** * * * * * * ** ** *
226779 T-AAAATGAGACA-AACATAGATTTTTGTAGGGATCTTCATTCATTTCGT-GATTAGGC-ACTAT
172 TCCCCAATAG-GATAA-AT-GA-TATTG-ATGG-TTTTC-TT--TTGCCTGGA--AATCTTTTCT
** * * * * * * ** *
226840 AAG-CATATTCTCCTCTTTAGGATAAATGATATTTATGGCTTTCTTTTGCATG-GA-AATC-TT-
226 TTGCCTTATT-T--TCCTT---A-AAATCAAAGTT-T-G--TAC-TTTAAATGAGACAAGCATTG
* * * * * *** * * * **** **
226900 -TTCTTTGTCATATTTTCC-TTAAAATCAAAGTTTGTGCTTTAAATGAGACATGCATTGATTCTC
279 ATTC-TCGTAAAAGTCTCCATT-CTTTCCAAGATTGGGAACCAAA--A-ACA--CATT--CCCT-
* ** ** * * * * * *
226963 GCAAAAGTCTACAT-TCTTTTCAAG-ATTGG-GAAC-CAA-A-AAGACATTAACTTCATTAGGAT
334 TCATTAGGATACATGAC-ATTGATGCTTTGGTG-TCGCAAGAGAAG-C-TT---TTC-TT----T
* * * ** * * ** * *
227022 ACATGACATTGATGCTTTCGTGTCGCAA-GAGAAGCTTT-TCT-TTCCACCATTTTTGATAGA-A
387 CCA--ACGTT-A----TT-G-AT-AAAATCA-AAG-TTTGTCTCTT--A--A-ATAAGACAAACA
* ** *** ** *** * * **
227083 TCAA-AGTTGTCACTAAAATA-TGACAAATAT-GAATAATCA
435 TGAATAGTCAT-ACTAATCCACTTTCTTTTCTGGATTAGGCA
* * * * * * * * ** *
227122 TACTAATCCACATTCCTT-TCCGGATTAGGCA-CCATCA-A-C-ATAG-TCT--TCCCATAAGGA
1 CA-TAA-ACATAGT-CTTCT-C--ATAAGG-ATACATGATATCGAT-GCTTTGGTTTCGTAA-GA
* * * * * ** * *** **
227179 TAC-ATGATCTT--GATGCTTTGGTTTTG-CAAGATACGCTTTC-TTCC-CAGCAATTTTTGTA-
57 AACGCT-TTCTTCCCA-CCAAT--TTTTGAAAAG-TACAAGTTCATTCCTCA--AA--TGAG-AC
** * * * ** ** * * * **
227237 AAGTATGAGTTTATTGCTCAAATGAGA-CAAACATGGA-TTC-TTG-TAGGGATCT-T-TATTCA
112 AAACATG-GATTCTAG-T--AA-G-GATC-TTCATTCATTTCATGGTTAGGCA-CTATAAACACA
*** * ** * * ** * * ***
227296 TTC-CGTGATTAGGCACTATAAACACATT-CTCCTCTTTAGAATAATGATATTG-ATGGTTTTCT
169 TTCTCCCCAATAGG-A-TA-AATGATATTGAT--GGTTT----T-CT--T-TTGCCTGGAAATC-
* *
227358 TTTCCATGGAAATCTTTTCTTTGTCTTATTTTTCTTAAAATCAAAGTTTGTACTTTAAATGAGAC
220 --------------TTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGAC
* * * * * * * ***
227423 ATGCGTTGATTCTCGCACAAGTCTCCATTCTTTTCGAGATTGGCAACCAAAAACACATTAATTTC
271 AAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAACACATTCCCTTC
* * *
227488 ATTAGGATACATGACATTGATGCTTTAGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTATTGAT
336 ATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCAACGTTATTGAT
* * * * *
227553 AGAATCAAAG-TTGTCTCTTAAATAAGACAAACATGAAAACTCATACTAATCCCCATTCTTTT-T
401 AAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCACTTTCTTTTCT
227616 GGGATTAGGCA
466 -GGATTAGGCA
* * * * * ** * *
227627 CTGTAAACATAGCCTTCTCATAAGGATGCATGATCTTGATGCTTTGGTTTCACAGGAGACGCTTT
1 C-ATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * ** * * * * *
227692 CTTCCCACCAATTTTTGTAAGGTATGAGTTCATTGCTCAAATGAGACAAACACGGATTTTTGTAG
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA
* ** * ** * **
227757 GGATCTTCATTCATTTCGTTATTAGGCACTATAAGCTTATTCTCCTCTTTAGGATAAATGATATT
130 GGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATT
* ** * ** * *
227822 TATGGTTTTCTTTTGTATGGAAATATTTTCTTTTTCATATTTTCCTTAAAATCAAAGTTTGTGCT
195 GATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACT
* * * * *
227887 TTAAATGAGACATGCATTGATTCTCGCAAAAGTTTCCATTCTTTTCAAGATTGGGAACCAAAAAG
260 TTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAAC
*
227952 ACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCA
325 ACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCA
* * * * * *
228017 TCGTTATTGATAGAATCAAAG-TTGTCTCTTAAATACGGCAAA-ATTAAATACTCATACTAATCC
390 ACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACA-TGAATAGTCATACTAATCC
* * * *
228080 CCATTCCTTTT-AGGATTAGGCGC
454 AC-TTTCTTTTCTGGATTAGGC-A
* * * * ** * *
228103 CATACACATAGTCTTCTCATAAGGATACATGATCTTGAAGCTTTGGTTTCACAGGAGACGCTTTC
1 CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTTC
* * ** * * * *
228168 TTCCCACCAATTCTTG-TAAGCTATGAGTTCATTGCTCAAATGAGACAAACATGGATTTTTGTAG
66 TTCCCACCAATTTTTGAAAAG-TACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA
* * * **
228232 GGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATT
130 GGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATT
* * *
228297 TATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCTTATTTTCCTTAAAATCAAAGTTTGTACT
195 GATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACT
* * * *
228362 TTAAATGAGACATGCGTTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAAC
260 TTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAAC
*** *
228427 ACATTAATTTCATTAGGATACATGACATTGATGCTTTGGTGTTGCAAGAGAAGCTTTTCTTTCCA
325 ACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCA
* * * * *
228492 CCATTATTGATAGAATCAAAG-TTGTCTCTTAAATAAGACAAATATGAATAATCATACTAATCCA
390 ACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCA
* *
228556 CATTCCTTTT-AGGATTAGGCA
455 C-TTTCTTTTCTGGATTAGGCA
* * * * * * *
228577 CCATAAACATAGTCTTCTTATAAGGATGCATGATCTTGATGCTTTGGTTTTGCAAGATACGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* ** * * * * * *
228642 CTTCCCACCAATTTTTGTAAAGTATGAGTTTATTGCTCAAATGATAAAAACATGGATTCTTGTAG
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA
* * * **** *
228707 GGATCCTT-ATTCATTTCGTGATTAGGCACTATAAACCCATTCTCCTTTTTTGGATAAATGATAT
130 GGAT-CTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATAT
* * * *
228771 TTATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCTTATTTTCATTAAAATCAAAGTTTGTAC
194 TGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTAC
* * * * * * * *
228836 ATTAAATGAGACATGCGTTGATTCTCGCAAAAGTCTCTATTCTTTTCAACATTGGGAATCAAAAA
259 TTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAA
* * * * **
228901 CACATTCCCTTTATTAGGATACAAGACATTGATGTTTTGTTGTAACAAGAGAAGCTTTTCTTTCC
324 CACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
* * * * * * * *
228966 -ACTATTATTGATAGAATCAAAGTTTATCTCTCAAATAAGATAAAGATTAATACTCATACTAATC
389 AAC-GTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATC
*
229030 CACTTTCTTTTTTGGATTAGGCA
453 CACTTTCTTTTCTGGATTAGGCA
* * * * * * **
229053 CCATAAACAGAGTCTTCTAATAATGATACATGTTATTGATGCTTTGGTTTCATAAGAAACATTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * * * * * * * *
229118 CTTCCCACCAATTTTTGTAAA-TTCAAATTTCGTGCCCCAAATGAGACAAGCGTGGATTCTAGTT
65 CTTCCCACCAATTTTTGAAAAGTAC-AAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTA
* * * * *
229182 AGGATCTTCATTCAATTCATGATTAGGCACTGCA-AAACACATTCTTCTCATTAGGATAAATGAT
129 AGGATCTTCATTCATTTCATGGTTAGGCACT--ATAAACACATTCTCCCCAATAGGATAAATGAT
* *
229246 ATTTATGGTTTTCTTTTGCGTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGT
192 ATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGT
* * * *
229311 ACATTAAATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAA
257 ACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAA
* * *
229376 AACACGTTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAACTTTTCTTT
322 AACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTT
* * * *
229441 CCACCGTTATTGATAGAATCAAAG-TTGTCTCTTAAATAAGACAAACATGAAAACTCATACTAAT
387 CCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAAT
* * *
229505 CCCCATTCTTTTCAGGATTAGGCA
452 CCACTTTCTTTTCTGGATTAGGCA
* * * * ** * * *
229529 CCATAAACATAGCCTTTTCATAAGGATACATGATCTTGATGCTTTGGTTTCACAGGATATGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * * * * * * * *
229594 CTCCCCACTAATTTTTGTAAGGTATAAGTTCATTGCTCAAATGAGACAAACATGGATTTTTGTAG
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA
* * * * * **
229659 GGATCTTCATTCATTTCGTGATTAGGCACTATAAGCATATTCTCCTCTTTAGGATAAATGATATT
130 GGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATT
** * *
229724 TCTGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCATATTTTCCTTAAAA-CAAAAGTTTGTAC
195 GATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATC-AAAGTTTGTAC
* * *
229788 TTTAAATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAA
259 TTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAA
* *
229853 GACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
324 CACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
* * * * * ** *
229918 ATCGTTATTGATAGAATCAAAG-TTATCTCTAAAATAAGGCAAAGTTGAATACTCATACTAATCC
389 AACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCC
* * *
229982 CCATTCCTTTT-AGGATTAGGCA
454 AC-TTTCTTTTCTGGATTAGGCA
* * * * * *
230004 CCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTTGCAAGATACACTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* ** * * * * * *
230069 CTTCCCACCAATTTTTGTAAAGTATGAGTTTATTGCTCAAATGATAAAAACATGGATTCTTGTAG
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA
* * * **** *
230134 GGATCCTT-ATTCATTTCGTGATTAGGCACTATAAACCCATTCTCCTTTTTTGGATAAATGATAT
130 GGAT-CTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATAT
* * * *
230198 TTATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCTTATTTTCATTAAAATCAAAGTTTGTAC
194 TGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTAC
* * * * * * * *
230263 ATTAAATGAGACATGCGTTGATTCTCGCAAAAGTCTCTATTCTTTTCAACATTGGGAATCAAAAA
259 TTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAA
* * * * **
230328 CACATTCCCTTTATTAGGATACAAGACATTGATGTTTTGTTGTAACAAGAGAAGCTTTTCTTTCC
324 CACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
* * * * * * * *
230393 -ACTATTATTGATAGAATCAAAGTTTATCTCTCAAATAAGATAAAGATTAATACTCATACTAATC
389 AAC-GTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATC
* *
230457 CACTTTCTTTTTTGCATTAGGCA
453 CACTTTCTTTTCTGGATTAGGCA
* * * * * * **
230480 CCATAAACAGAGTCTTCTAATAATGATACATGTTATTGATGCTTTGGTTTCATAAGAAACATTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * * * * * * * *
230545 CTTCCCACCAATTTTTGTAAA-TTCAAATTTCGTGCCCCAAATGAGACAAGCGTGGATTCTAGTT
65 CTTCCCACCAATTTTTGAAAAGTAC-AAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTA
* * * * *
230609 AGGATCTTCATTCAATTCATGATTAGGCACTGCA-AAACACATTCTTCTCATTAGGATAAATGAT
129 AGGATCTTCATTCATTTCATGGTTAGGCACT--ATAAACACATTCTCCCCAATAGGATAAATGAT
* * * *
230673 ATTTATGGTTTTCTTTTGCGTGGAAATCTTTCCTTTGCCTTATTTTCCTTAAAATCAATGTTTGT
192 ATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGT
* * * *
230738 ACATTAAATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAA
257 ACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAA
* * *
230803 AACACGTTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAACTTTTCTTT
322 AACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTT
* * * *
230868 CCACCGTTATTGATAGAATCAAAG-TTGTCTCTTAAATAAGACAAACATGAAAACTCATACTAAT
387 CCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAAT
* * *
230932 CCCCATTCTTTTCAGGATTAGGCA
452 CCACTTTCTTTTCTGGATTAGGCA
* * * * ** * * *
230956 CCATAAACATAGCCTTTTCATAAGGATACATGATCTTGATGCTTTGGTTTCACAGGATATGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * * * * * * *
231021 CTCCCCACCAATTTTTGTAAGGTATAAGTTCATTGCTCAAATGAGACAAACATGGATTTTTGTAG
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA
* * * * * **
231086 GGATCTTCATTCATTTCGTGATTAGGCACTATAAGCATATTCTCCTCTTTAGGATAAATGATATT
130 GGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATT
** * *
231151 TCTGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCATATTTTCCTTAAAA-CAAAAGTTTGTAC
195 GATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATC-AAAGTTTGTAC
* * *
231215 TTTAAATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAA
259 TTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAA
* *
231280 GACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
324 CACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
* * * * * ** *
231345 ATCGTTATTGATAGAATCAAAG-TTATCTCTAAAATAAGGCAAAGTTGAATACTCATACTAATCC
389 AACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCC
* * *
231409 CCATTCCTTTT-AGGATTAGGCA
454 AC-TTTCTTTTCTGGATTAGGCA
* * * * * *
231431 CCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTTGCAAGATACACTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* ** * * * *
231496 CTTCCCACCAATTTTTGTAAAGTATGAGTTTATTGCTCAAATGAGACAAACATGGATTCTTGTAG
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA
* * * ** *
231561 GGACCTTCATTCATTTCGTGATTAGGCACTATAAACACATT-TCCCTCTTTAGGATAAACGATAT
130 GGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCC-CAATAGGATAAATGATAT
* ** * * *
231625 TTATGGTTTTCTTTT-CCATGGAAATCTTCCCTTTGTCATATTTTCCTTAATATCAAAGTTTGTA
194 TGATGGTTTTCTTTTGCC-TGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTA
* *
231689 CTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAA
258 CTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAA
* * * *
231754 ACACGTTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAACATTTCTTTC
323 ACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTC
* * * * *
231819 CACCGTTATCGATAGAATCAAAG-TTGTCTCTTAAATAAGACAAACATGAAAACTCATACTAATC
388 CAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATC
* * *
231883 CCCATTCTTTTCAGGATTAGGCA
453 CACTTTCTTTTCTGGATTAGGCA
* * * * ** * *
231906 CCATAAACATAGCCTTTTCATAAGGATACATGATCTTGATGCTTTGGTTTCACAAGATATGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * * * * *
231971 CTCCCCACCAATTTTTGTAAGGTATAAGTTCATTGCTCAAATGAGACAAACATGGATTTTTA-TA
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGA-TTCTAGTA
* * * * * * **
232035 GGGATCTTCATTCATTTCGTGATTAGGCACTATAAGCATATTCTCCTCTTTAGGATAAATGATAT
129 AGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATAT
** * * *
232100 TTCTGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCATATTTTCCTTAAAACCAAAGTTTGTAC
194 TGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTAC
* * *
232165 TTTAAATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAA
259 TTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAA
*
232230 GACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
324 CACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
* * * * ** *
232295 ATCGTTATTGATAGAATCAAAG-TTGTCTCTAAAATAAGGCAAAGTTGAATACTCATACTAATCC
389 AACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCC
* * *
232359 CCATTCCTTTT-AGGATTAGGCA
454 AC-TTTCTTTTCTGGATTAGGCA
* * * * * *
232381 CCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCGCAGGATACTCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * * ** * * * *
232446 TTTCCCCACC-TTTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGATAAACATGGATTCTTGTA
65 CTT-CCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTA
* * * * * **
232510 GGGACCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATAG
129 AGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATA-
* ** ***
232575 TT-ATGGTTTAT-TTTT-CCTTGGAAATCTTTTCTCTATCACGTTTTCCTTAAAATCAAAGTTTG
193 TTGATGGTTT-TCTTTTGCC-TGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTG
* * * * * *
232637 TACTTTAAATGAGACATGCATTGATTCTTGCAAAAGTCTCCATTCTTTTCAAGTTTGGGAACCGA
256 TACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAA
** *
232702 AAACACATTCATTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAACTTTTCTT
321 AAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTT
* * * *
232767 TCCACCGTTATTGATAGAATCAAAG-TTGTCTCTTAAATAAGACAAACATGAAAACTCATACTAA
386 TCCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAA
* * *
232831 TCCCCATTCTTTTCAGGATTAGGCA
451 TCCACTTTCTTTTCTGGATTAGGCA
* * * * * * * *
232856 CCATAAACATAGCCTTTTCATAAGGATACATGATCTTGATGCTTTGGTTTCATAGGATATGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * * * * * * *
232921 CTCCCCACCAATTTTTGTAAGGTATAAGTTCATTGCTCAAATGAGACAAACATGGATTTTTGTAG
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA
* * * * * * **
232986 GGATCTTCATTCATTTCGTGATTAGGAACTATAAGCATATTCTCCTCTTTAGGATAAATGATATT
130 GGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATT
** * * *
233051 TCTGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCATATTTTCCTTAAAACCAAAGTTTGTACT
195 GATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACT
* * * * * *
233116 CTAAATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAGAG
260 TTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAAC
233181 ACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCA
325 ACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCA
* * * * ** * *
233246 TCGTTATTGATAGAATCAAAG-TTGTCTCTAAAATAAGGCAAAGTTGAATACTCATACTAATCCC
390 ACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCA
* *
233310 CATTCCTTTT-AGGATTAGGCA
455 C-TTTCTTTTCTGGATTAGGCA
* * ** * * *
233331 CCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCACAGGATACTCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * ** * ** * * * *
233396 TTTCCCCAACTTTTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGATAAACATGGATTCTTGTA
65 CTT-CCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTA
* * * * * **
233461 GGGACCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATAG
129 AGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATA-
** ***
233526 TT-ATGGTTTAT-TTTT-CCTTGGAAATCTTTTCTTTATCACGTTTTCCTTAAAATCAAAGTTTG
193 TTGATGGTTT-TCTTTTGCC-TGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTG
* * * * * *
233588 TACTTTAAATGAGACATGCATTGATTCTTGCAAAAGTCTCCATTCTTTTCAAGTTTGGGAACCGA
256 TACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAA
** *
233653 AAACACATTCATTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAACTTTTCTT
321 AAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTT
* * * * *
233718 TCCACCGTTATTGATAGAATCAAAG-TTGTCTCTTAAATAAGACAAACATGAAAACTCATACGAA
386 TCCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAA
* * *
233782 TCCCCATTCTTTTCAGGATTAGGCA
451 TCCACTTTCTTTTCTGGATTAGGCA
* * * * * * * *
233807 CCATAAACATAGCCTTTTCATAAGGATACATGATCTTGATGCTTTGGTTTTGCAAGATACACTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* ** * * * *
233872 CTTCCCACCAATTTTTGTAAAGTATGAGTTTATTGCTCAAATGAGACAAACATGGATTCTTGTAG
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA
* * * * **
233937 GGACCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATAGT
130 GGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATA-T
** ***
234002 T-ATGGTTTAT-TTTT-CCTTGGAAATCTTTTCTTTATCACGTTTTCCTTAAAATCAAAGTTTGT
194 TGATGGTTT-TCTTTTGCC-TGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGT
* * * *
234064 ACTTTAAATGAGACATGCATTGATTCTTGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAA
257 ACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAA
* *
234129 AAGACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTT
322 AACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTT
* * * * ** *
234194 CCATCGTTATTGATAGAATCAAAG-TTGTCTCTAAAATAAGGCAAAGTTGAATACTCATACTAAT
387 CCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAAT
* * *
234258 CCCCATTCCTTTT-AGGATTAGGCA
452 CCAC-TTTCTTTTCTGGATTAGGCA
* * * * * *
234282 CCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTTGCAAGATACACTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* ** * * * *
234347 CTTCCCACCAATTTTTGTAAAGTATGAGTTTATTGCTCAAATGAGACAAACATGGATTCTTGTAG
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA
* * * ** *
234412 GGACCTTCATTCATTTCGTGATTAGGCACTATAAACACATT-TCCCTCTTTAGGATAAACGATAT
130 GGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCC-CAATAGGATAAATGATAT
* ** * * *
234476 TTATGGTTTTCTTTT-CCATGGAAATCTTCCCTTTGTCATATTTTCCTTAATATCAAAGTTTGTA
194 TGATGGTTTTCTTTTGCC-TGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTA
* *
234540 CTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAA
258 CTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAA
* * * *
234605 ACACGTTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAACATTTCTTTC
323 ACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTC
* * * *
234670 CACCGTTATTGATAGAATCAAAG-TTGTCTCTTAAATAAGACAAACATGAAAACTCATACTAATC
388 CAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATC
* * *
234734 CCCATTCTTTTCAGGATTAGGCA
453 CACTTTCTTTTCTGGATTAGGCA
* * * * ** * *
234757 CCATAAACATAGCCTTTTCATAAGGATACATGATCTTGATGCTTTGGTTTCACAAGATATGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * * * * * * *
234822 CTCCCCACCAATTTTTGTAAGGTATAAGTTCATTGCTCAAATGAGACAAACATGGATTTTTGTAG
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA
* * * * * **
234887 GGATCTTCATTCATTTCGTGATTAGGCACTATAAGCATATTCTCCTCTTTAGGATAAATGATATT
130 GGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATT
** * * *
234952 TCTGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCATATTTTCCTTAAAACCAAAGTTTGTACT
195 GATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACT
* * * *
235017 TTAAATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAAG
260 TTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAAC
*
235082 ACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCA
325 ACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCA
* * * * * ** * *
235147 TCGTTATTGATAGAATCAAAG-TTATCTCTAAAATAAGGCAAAGTTGAATACTCATACTAATCCC
390 ACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCA
* *
235211 CATTCCTTTT-AGGATTAGGCA
455 C-TTTCTTTTCTGGATTAGGCA
* * * * * *
235232 CCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTTGCAAGATACACTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* ** * * * *
235297 CTTCCCACCAATTTTTGTAAAGTATGAGTTTATTGCTCAAATGAGACAAACATGGATTCTTGTAG
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA
* * * ** *
235362 GGACCTTCATTCATTTCGTGATTAGGCACTATAAACACATT-TCCCTCTTTAGGATAAACGATAT
130 GGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCC-CAATAGGATAAATGATAT
* * ** * * *
235426 TTATGGTTTTCTTTTGCATGGAAATCTTCCCTTTGTCATATTTTCCTTAATATCAAAGTTTGTAC
194 TGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTAC
* * * * *
235491 TTTAAACGAGACATGCGTTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAA
259 TTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAA
** *
235556 CACATTCATTTCATTAGGATACATGACATTGAGGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
324 CACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
* ** * * * *
235621 ACCGTTGCTAATAGAATCAAAG-TTGTCTCTTAAATAAGACAAACATGAAAACTCATACTAATCC
389 AACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCC
* * *
235685 CCATTCTTTTCAGGATTAGGCA
454 ACTTTCTTTTCTGGATTAGGCA
* * * * ** * *
235707 CCATAAACATAGCCTTTTCATAAGGATACATGATCTTGATGCTTTGGTTTCACAAGATATGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * * * * * * *
235772 CTCCCCACCAATTTTTGTAAGGTATAAGTTCATTGCTCAAATGAGACAAACATGGATTTTTGTAG
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA
* * * * * **
235837 GGATCTTCATTCATTTCGTGATTAGGCACTATAAGCATATTCTCCTCTTTAGGATAAATGATATT
130 GGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATT
** * * *
235902 TCTGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCATATTTTCCTTAAAACCAAAGTTTGTACT
195 GATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACT
* * * * *
235967 TTAAATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGACCCAAAAAG
260 TTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAAC
236032 ACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCA
325 ACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCA
* * * * ** * *
236097 TCGTTATTGATAGAATCAAAG-TTGTCTCTAAAATAAGGCAAAGTTGAATACTCATACTAATCCC
390 ACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCA
* *
236161 CATTCCTTTT-AGGATTAGGCA
455 C-TTTCTTTTCTGGATTAGGCA
* * * * * *
236182 CCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCGCAGGATACTCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * * ** * * * *
236247 TTTCCCCACC-TTTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGATAAACATGGATTCTTGTA
65 CTT-CCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTA
* * * * * **
236311 GGGACCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATAG
129 AGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATA-
** ***
236376 TT-ATGGTTTAT-TTTT-CCTTGGAAATCTTTTCTTTATCACGTTTTCCTTAAAATCAAAGTTTG
193 TTGATGGTTT-TCTTTTGCC-TGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTG
* * * * * *
236438 TACTTTAAATGAGACATGCATTGATTCTTGCAAAAGTCTCCATTCTTTTCAAGTTTGGGAACCGA
256 TACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAA
** *
236503 AAACACATTCATTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAACTTTTCTT
321 AAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTT
* * * * *
236568 TCCACCGTTATTGATAGAATCAAAG-TTGTCTCTTAAATAAGAAAAACATGAAAACTCATACTAA
386 TCCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAA
* * *
236632 TCCCCATTCTTTTCAGGATTAGGCA
451 TCCACTTTCTTTTCTGGATTAGGCA
* * * * ** * * *
236657 CCATAAACATAGCCTTTTCATAAGGATACATGATCTTGATGCTTTGGTTTCACAGGATATGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * * * * * * *
236722 CTCCCCACCAATTTTTGTAAGGTATAAGTTCATTGCTCAAATGAGACAAACATGGATTTTTGTAG
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA
* * * * * **
236787 GGATCTTCATTCATTTCGTGATTAGGCACTATAAGCATATTCTCCTCTTTAGGATAAATGATATT
130 GGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATT
** * * *
236852 TCTGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCATATTTTCCTTAAAACCAAAGTTTGTACT
195 GATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACT
* * * *
236917 TTAAATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACC-AAAAG
260 TTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAAC
236981 ACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCA
325 ACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCA
* * * * ** * *
237046 TCGTTATTGATAGAATCAAAG-TTGTCTCTAAAATAAGGCAAAGTTGAATACTCATACTAATCCC
390 ACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCA
* *
237110 CATTCCTTTT-AGGATTAGGCA
455 C-TTTCTTTTCTGGATTAGGCA
* * * * * * *
237131 CCATAAACATAGTCTTCTCATAAGGATACATGATCTTGAGGCTTTGGTTTTGCAAGATACACTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* ** * * * *
237196 CTTCCCACCAATTTTTGTAAAGTATGAGTTTATTGCTCAAATGAGACAAACATGGATTCTTGTAG
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA
* * * ** *
237261 GGACCTTCATTCATTTCGTGATTAGGCACTATAAACACATT-TCCCTCTTTAGGATAAACGATAT
130 GGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCC-CAATAGGATAAATGATAT
* * ** * * *
237325 TTATGGTTTTCTTTTGCATGGAAATCTTCCCTTTGTCATATTTTCCTTAATATCAAAGTTTGTAC
194 TGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTAC
* * * * *
237390 TTTAAACGAGACATGCGTTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAA
259 TTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAA
** *
237455 CACATTCATTTCATTAGGATACATGACATTGAGGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
324 CACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
* ** * * * * * *
237520 ACCGTTGCTAATAGAATCAAAG-TTGTCTCTTAATTAAGAGAAATATGAATACTCATACTAATCC
389 AACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCC
* * * *
237584 ACATTCCTTTCAGGTTTAGGCA
454 ACTTTCTTTTCTGGATTAGGCA
* * * * ** *
237606 CCATAAACATAGTCTTCTCATAAGGATACATGATCTTGTTGCTTTGGTTTCGCAAGATGCACTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * * * *
237671 CTTCCCACCAATTTTTGTAAAGT-CTGAGTTTATTCCTCAAAAGAGAC-AACATGGATTCTTGTA
65 CTTCCCACCAATTTTTGAAAAGTAC-AAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTA
* * * * ****
237734 GGGATCTTCATTCATTTCGTGATTAGGCACTATAAATACATTCTCCTTTTTAGGATAAATGATAT
129 AGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATAT
* * *
237799 TTATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCTTATTTTTCCTTAAAATCAAAGTTTGTA
194 TGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTA-TTTTCCTTAAAATCAAAGTTTGTA
* * * * * *
237864 CTTTAATTGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAACATTAGGAATCAAAA
258 CTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAA
* ** * * * ***
237929 ACACATTCCCTTTATTAGGATACAACACAATGATGTTTTAGTGGAACAAGAGAAGCTTTTCTTTC
323 ACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTC
* * * *
237994 C-AC-TACTATTGATAGAATCAAAGTTTCTCTCTCAAATAAGACAAACATGAATACTCATACTAA
388 CAACGT--TATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAA
* *
238057 TCCACATTCTTTTCTGGACTAGGCA
451 TCCACTTTCTTTTCTGGATTAGGCA
* * * ** **
238082 CCATAAACA-A--ATTCTAATAAGGATACATGATATTGATGCTTTGGTTTCACAAGAAACATTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * * * * * *
238144 CTTCCCACCAATTTTTGTAAA-TTCAAATTTC-TTGCCCCAAATGTGACAAGCGTGGATTCTAGT
65 CTTCCCACCAATTTTTGAAAAGTAC-AAGTTCATT-CCTCAAATGAGACAAACATGGATTCTAGT
* * * * * * *
238207 TAGGATCTTCATTCAATTCATGATTAGGCACTACAAAACACATTCTTCTCATTAGGATAAATGAT
128 AAGGATCTTCATTCATTTCATGGTTAGGCACTA-TAAACACATTCTCCCCAATAGGATAAATGAT
* *
238272 ATTGATGGTTTTCTTTTGCGTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATAAAAGTTTGT
192 ATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGT
* * * ** *
238337 ACTTTAAATGAGACACGCGTTGATTCTCGCAAAAGTCTCCATTCTTTTGAAGATTAGGAACCAAA
257 ACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAA
* * * *
238402 AACAAATTCCTTTCATTAGGATACATGACATTGACGCTTTGGTGTTGCAAGAGAAGCTTTTCTTT
322 AACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTT
* * * *
238467 CCACCGTTATTGATAGAATCAAAG-TTGTCTCTTAAATAATACAAACATGAATACTCATACTAAT
387 CCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAAT
* *
238531 CC-CTATTCTTTTCAGGATTAGGCGT
452 CCACT-TTCTTTTCTGGATTAGGC-A
* * * * * * * *
238556 TATAAACATAGCCTTTTCATAAGGATACATGATCTTGATGCTTTGG-TTCGCAGGATACGCTTTC
1 CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTTC
** * ** * * *
238620 TTCCCACCAATTTTTGTGAGGTATGAGTTCATTGCTCAAATGAGACAAACATGGATTCTTGCAAG
66 TTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAAG
* * * * ** * *
238685 GATCTTCATTCATTTCGTGATTAGGCATTATAAACACATTCTCCTCTTTCGGATAAATGATATTT
131 GATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATTG
* * * *
238750 ATGGTTTTCTTTTGCATGGAAATCTTTTCTGTGTCTTATTTTCCTTAAAATTAAAGTTTGTACTT
196 ATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTT
* * * * *
238815 TAAATGAGACATGCATTGATTCTCGTAAAAGTCTCTATTCTTTTCAACATTGGGAATCAAAAACA
261 TAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAACA
* * * * **
238880 CATTCCCTTTATTAGGATACAAGACATTGATGTTTTGTTGTAACAAGAGAAGCTTTTCTTTCC-A
326 CATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCAA
* * * * * * * * *
238944 CTATTATTGATAGAATGAAAGTCTATCTCTCAAATAAGATAAACATTAATACTCATACTAATCCA
391 C-GTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCA
*
239009 CATTCTTTTCTGGATTAGGCA
455 CTTTCTTTTCTGGATTAGGCA
* * * ** **
239030 CCATAAACAAAGTCTTCTAAT-AGTGATACATGATATTGATGCTTTGGTTTCACAAGAAACATTT
1 -CATAAACATAGTCTTCTCATAAG-GATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTT
* * * * * * * *
239094 TCTTCCCACCAATTTTTGTAAA-TTCAAATTTCGTGCCGCAAATGAGACAACCGTGGATTCTAGT
64 TCTTCCCACCAATTTTTGAAAAGTAC-AAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGT
* * * * * * *
239158 TAGGATCTTCATTCAATTCATGATTAGGCACTACAAAACACATTCTTCTCATTAGGATAAATGAT
128 AAGGATCTTCATTCATTTCATGGTTAGGCACTA-TAAACACATTCTCCCCAATAGGATAAATGAT
* * * *
239223 ATTTATGGTTTTCTTTTGCGTCGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTCT
192 ATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGT
* * *
239288 ACTTTAAATGAGACATGCATTGATTCTCGCAAAGGTCTCCATTCTTTCCAAGATTGGGAACCAAA
257 ACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAA
* * * *
239353 AACACGTTCCTTTCACTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAACTTTTCTTT
322 AACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTT
* * * *
239418 CCACCGTTATTGATAGAATCAAAG-TTGTCTCTTAAATAAGACAAACATGAAAACTCATACTAAT
387 CCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAAT
* * *
239482 CC-CATTCTTTTCAGGATTAGGTA
452 CCACTTTCTTTTCTGGATTAGGCA
* * * ** *
239505 CCATAAACATAGCCTTCTCATAAGGATACATGATTTTGATGCTTTGGTTTCACAAGATACGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * ** * * * * *
239570 CTTCCCACCAATTTTTGTAAGGTATGAGTTCATTGCTCAAATAAGACAAACATGGATTTTTGTAG
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA
* * * * * **
239635 GGATCTTCATTCATTTC-GGGATTAGGCACTATAAGCATATTCTGCTCTTTAGGATAAATGATAT
130 GGATCTTCATTCATTTCATGG-TTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATAT
* * * *
239699 TTATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTAC
194 TGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTAC
* * * *
239764 TTTAAATGAGATATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAA
259 TTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAA
*
239829 GACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
324 CACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
* * * *
239894 ATCGTTATTGATAGAATCAAAG-TTGTCTCTTAAATAAGGCAAA-ATTGAATACTCATACTAATC
389 AACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACA-TGAATAGTCATACTAATC
*
239957 C-CTATTCCTTTT-AGGATTAGGCA
453 CACT-TT-CTTTTCTGGATTAGGCA
* * * * *
239980 CCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCGCAGGATACGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* ** * * * * *
240045 CTTCCC-CACAATTTTTGTAAAGTATGAGTTAATTGCTCAAATGAGACAAACACGGATTCTTGCA
65 CTTCCCAC-CAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTA
* ** * * * **
240109 GGGATCTTCATTCATTTTGTGATTAGGCACTATATACACATTCTCCTCTTTAGGATAAATGATAT
129 AGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATAT
* * * * * *
240174 TTATGGTTTTCTTTTGCATGGAAATCTTCTCTTTGTCAT-TTTTCCTTAATATCAAAGTTTGTAC
194 TGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTAC
* * * * **
240238 TTTAAACGAGACATGCGTTGATTCTCGCAAAAGTCTCCATTCTTTTAAAGATTGGGAACCAAAAA
259 TTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAA
** *
240303 CACATTCATTTCATTAGGATACATGACATTGAGGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
324 CACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
* ** * * * *
240368 ACCGTTGCTGATAGAATCAAAG-TTGTCTCTT-AATGAACACAAATATGAATACTCATACTAATC
389 AACGTTATTGATAAAATCAAAGTTTGTCTCTTAAAT-AAGACAAACATGAATAGTCATACTAATC
* * ** * *
240431 TACATTCCATTCAGGTTTAGGCA
453 CACTTTCTTTTCTGGATTAGGCA
* * * ** * * *
240454 CCATAAACATAGTCTTCTCATAAGGATACATGATCTTGTTGCTTTCATTTCGCAACATACGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * ** * * * * *
240519 CTTCCCCCCAATTTTTGTAAAGTATGAGTTTATTCCTCAAAAGAGAC-AACATGGATTGTTGTAG
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA
* * * * **
240583 GGATCTTCATTCATTTCGTGATTAGGCACTATAAATACATTCTCCTCTTTAGGATAAATGATATT
130 GGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATT
* * *
240648 TATGGTTTTCTTTTGCATGGAAAT-TTTTGCTTTGTCTTATTTTCCTTAAAATCAAAGTTTGTAC
195 GATGGTTTTCTTTTGCCTGGAAATCTTTT-CTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTAC
* * * * *
240712 ATTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATT-TTTTCAACATTGGGAATCAAAAA
259 TTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAA
* * * * * * *** *
240776 CACATTCTCTTTATTAGGATACAAGACAATGATGTTTTAGTGGAACAAGAGAAGCTTTTCCTTCC
324 CACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
*** * ** *
240841 ATTATTATTGATAGAATCAAAGTTCCTCTCTTAAATAAGACAAACATGAATACTCATACTAATCC
389 AACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCC
* *
240906 ACATTCTTTTCAGGATTAGGCA
454 ACTTTCTTTTCTGGATTAGGCA
* * * ** **
240928 CGATAAACAAAGTCTTCTAATAAGGATACATGATATTGATGCTTTGGTTTCACAAGAAACATTTT
1 C-ATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * * * * * * * * * *
240993 CTTCCCACCAATTTTTGTAAA-TTCAAATTTCGTGCCCCAAATGGGACAAGCGTGGATTCCAGTT
65 CTTCCCACCAATTTTTGAAAAGTAC-AAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTA
* * * * * *
241057 AGGATCTTCATTCAATTCATGATTAGGCACTACAAAACACATTCTTCCCATTAGGAAAAATGATA
129 AGGATCTTCATTCATTTCATGGTTAGGCACTA-TAAACACATTCTCCCCAATAGGATAAATGATA
* * *
241122 TTGATGGTTTTCTTTTGCGTAGTAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTA
193 TTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTA
* * * * * *
241187 CTTTAAATGAGACACGCGTTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAGA
258 CTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAA
* ** *
241252 ACAAATTCTTTTCATTAGGATACATGACATTGATGCTTTGGTGTTGCAAGAGAAGCTTTTCTTTC
323 ACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTC
* * * *
241317 CACCGTTATTGATAGAATCAAA-ATTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATC
388 CAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATC
*
241381 C-CTATTCTTTTCAGGATTAGGCA
453 CACT-TTCTTTTCTGGATTAGGCA
* * * * * *
241404 TCATAAACATAGCCTTTTCATAAGGATACATGA-ACTTGATGCTTTGG-TTCGCAGGATACGCTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATA-TCGATGCTTTGGTTTCGTAAGAAACGCTT
* * ** * ***
241467 TCTTCCCACCAATTTTTGTAAGGTATGAGTTCATTGCTCAAATGAGACAAACATGGATTCTTCCA
64 TCTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTA
* * * * * ** *
241532 GGGATCTTCATTCATATCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGAATAAATGATAT
129 AGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATAT
* * * * *
241597 TTATTGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCTTATTTTCCTTAAAATCAAAGTTTATAC
194 TGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTAC
* * * *
241662 TTTAAATGAGACATGCATCGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAA
259 TTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAA
* ***
241727 CACCTTAATTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
324 CACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
* * * * * *
241792 ATCATTGTTGATAGAATCAAAG-TTGTCGCTTAAATAAGACAAATATGAATTA-TCATACTAATC
389 AACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAA-TAGTCATACTAATC
* * * *
241855 CACATTCCTTTCAGGATTAAGCA
453 CACTTTCTTTTCTGGATTAGGCA
* * * * *
241878 CCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTTGCAAGATACGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * ** * * * * *
241943 CTTCCCACCAATTTTTGTAAAGCATGAGTTTATTGCTCAAATGAGACAAACATCGATTCTTGCAA
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA
* * * * **
242008 GGATCTTTATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATT
130 GGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATT
* * * *
242073 TATGATTTTCTTTT-CCATGGAAATCTTTTCTTTGTCTTATTTTCCTTAAAATCAAAGTTTATAC
195 GATGGTTTTCTTTTGCC-TGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTAC
* * * * * *
242137 TTTATATGAGACATGCATTGATTCTCGTAAAAGTCTCTATTCTTTTCAACATTGGGAATCAAAAA
259 TTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAA
* * * * * **
242202 CACATTCCCTTTATAAGGATACAAGACATTGATGTTTTGTTGTAACAAGAGAAGCTTTTCTTTCC
324 CACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
* * * * *
242267 -ACTATTATTGATAGAATCAAAGTTTCTCTCTCAAATAAGACAAACATGAATACTCATACTAATC
389 AAC-GTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATC
* *
242331 CACATTCTTTTCTGGACTAGGCA
453 CACTTTCTTTTCTGGATTAGGCA
* * * ** **
242354 CCATAAACA-A--ATTCTAATAAGGATACATGATATTGATGCTTTGGTTTCACAAGAAACATTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * * * * * *
242416 CTTCCCACCAATTTTTGTAAA-TTCAAATTTC-TTGCCCCAAATGTGACAAGCGTGGATTCTAGT
65 CTTCCCACCAATTTTTGAAAAGTAC-AAGTTCATT-CCTCAAATGAGACAAACATGGATTCTAGT
* * * * * * *
242479 TAGGATCTTCATTCAATTCATGATTAGGCACTACAAAACACATTCTTCTCATTAGGATAAATGAT
128 AAGGATCTTCATTCATTTCATGGTTAGGCACTA-TAAACACATTCTCCCCAATAGGATAAATGAT
*
242544 ATTGATGGTTTTCTTTTGCGTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGT
192 ATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGT
* * * ** *
242609 ACTTTAAATGAGACACGCGTTGATTCTCGCAAAAGTCTCCATTCTTTTGAAGATTAGGAACCAAA
257 ACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAA
* * * *
242674 AACAAATTCCTTTCATTAGGATACATGACATTGACGCTTTGGTGTTGCAAGAGAAGCTTTTCTTT
322 AACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTT
* * * * *
242739 CCACCGTTACTGATAGAATCAAAG-TTGTCTCTTAAATAATACAAACATGAATACTCATACTAAT
387 CCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAAT
* *
242803 CC-CTATTCTTTTCAGGATTAGGCGT
452 CCACT-TTCTTTTCTGGATTAGGC-A
* * * * * * * *
242828 TATAAACATAGCCTTTTCATAAGGATACATGATCTTGATGCTTTGG-TTCGCAGGATACGCTTTC
1 CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTTC
** * ** * * *
242892 TTCCCACCAATTTTTGTGAGGTATGAGTTCATTGCTCAAATGAGACAAACATGGATTCTTGCAAG
66 TTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAAG
* * * * ** *
242957 GATCTTCATTCATTTCGTGATTAGGCATTATAAACACATTCTCCTCTTTAGGATAAATGATATTT
131 GATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATTG
* * * *
243022 ATGGTTTTCTTTTGCATGGAAATCTTTTCTGTGTCTTATTTTCCTTAAAATTAAAGTTTGTACTT
196 ATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTT
* * * * *
243087 TAAATGAGACATGCATTGATTCTCGTAAAAGTCTCTATTCTTTTCAACATTGGGAATCAAAAACA
261 TAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAACA
* * * * **
243152 CATTCCCTTTATTAGGATACAAGACATTGATGTTTTGTTGTAACAAGAGAAGCTTTTCTTTCC-A
326 CATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCAA
* * * * * * * * *
243216 CTATTATTGATAGAATGAAAGTCTATCTCTCAAATAAGATAAACATTAATACTCATACTAATCCA
391 C-GTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCA
*
243281 CATTCTTTTCTGGATTAGGCA
455 CTTTCTTTTCTGGATTAGGCA
* * * ** **
243302 CCATAAACAAAGTCTTCTAAT-AGTGATACATGATATTGATGCTTTGGTTTCACAAGAAACATTT
1 -CATAAACATAGTCTTCTCATAAG-GATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTT
* * * * * * * *
243366 TCTTCCCACCAATTTTTGTAAA-TTCAAATTTCGTGCCGCAAATGAGACAACCGTGGATTCTAGT
64 TCTTCCCACCAATTTTTGAAAAGTAC-AAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGT
* * * * * * *
243430 TAGGATCTTCATTCAATTCATGATTAGGCACTACAAAACACATTCTTCTCATTAGGATAAATGAT
128 AAGGATCTTCATTCATTTCATGGTTAGGCACTA-TAAACACATTCTCCCCAATAGGATAAATGAT
* * * *
243495 ATTTATGGTTTTCTTTTGCGTCGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTCT
192 ATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGT
* * * *
243560 ACTTTAAATGAGACATGCATTGATTCTCGCAAAGGTCTCCATTCTTTCCAAGATTGGCAACCAAA
257 ACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAA
* * * *
243625 AACACGTTCCTTTCACTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAACTTTTCTTT
322 AACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTT
* * * *
243690 CCACCGTTATTGATAGAATCAAAG-TTGTCTCTTAAATAAGACAAACATGAAAACTCATACTAAT
387 CCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAAT
* * *
243754 CC-CATTCTTTTCAGGATTAGGTA
452 CCACTTTCTTTTCTGGATTAGGCA
* * * ** *
243777 CCATAAACATAGCCTTCTCATAAGGATACATGATTTTGATGCTTTGGTTTCACAAGATACGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * ** * * * * *
243842 CTTCCCACCAATTTTTGTAAGGTATGAGTTCATTGCTCAAATAAGACAAACATGGATTTTTGTAG
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA
* * * * * **
243907 GGATCTTCATTCATTTC-GGGATTAGGCACTATAAGCATATTCTGCTCTTTAGGATAAATGATAT
130 GGATCTTCATTCATTTCATGG-TTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATAT
* * * *
243971 TTATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTAC
194 TGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTAC
* * * * *
244036 TTTAAATTAGATATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAA
259 TTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAA
* ***
244101 CACCTTAATTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
324 CACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
* * * * * *
244166 ATCATTGTTGATAGAATCAAAG-TTGTCGCTTAAATAAGACAAATATGAATTA-TCATACTAATC
389 AACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAA-TAGTCATACTAATC
* * * *
244229 CACATTCCTTTCAGGATTAAGCA
453 CACTTTCTTTTCTGGATTAGGCA
* * * * *
244252 CCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTTGCAAGATACGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * ** * * * * *
244317 CTTCCCACCAATTTTTGTAAAGCATGAGTTTATTGCTCAAATGAGACAAACATCGATTCTTGCAA
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA
* * * * **
244382 GGATCTTTATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATT
130 GGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATT
* * * *
244447 TATGATTTTCTTTT-CCATGGAAATCTTTTCTTTGTCTTATTTTCCTTAAAATCAAAGTTTATAC
195 GATGGTTTTCTTTTGCC-TGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTAC
* * * * * *
244511 TTTATATGAGACATGCATTGATTCTCGTAAAAGTCTCTATTCTTTTCAACATTGGGAATCAAAAA
259 TTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAA
* * * * **
244576 CACATTCCCTTTATTAGGATACAAGACATTGATGTTTTGTTGTAACAAGAGAAGCTTTTCTTTCC
324 CACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
* * * * *
244641 -ACTATTATTGATAGAATCAAAGTTTCTCTCTCAAATAAGACAAACATGAATACTCATACTAATC
389 AAC-GTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATC
* *
244705 CACATTCTTTTCTGGACTAGGCA
453 CACTTTCTTTTCTGGATTAGGCA
* * * ** **
244728 CCATAAACA-A--ATTCTAATAAGGATACATGATATTGATGCTTTGGTTTCACAAGAAACATTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * * * * * *
244790 CTTCCCACCAATTTTTGTAAA-TTCAAATTTC-TTGCCCCAAATGTGACAAGCGTGGATTCTAGT
65 CTTCCCACCAATTTTTGAAAAGTAC-AAGTTCATT-CCTCAAATGAGACAAACATGGATTCTAGT
* * * * * * *
244853 TAGGATCTTCATTCAATTCATGATTAGGCACTACAAAACACATTCTTCTCATTAGGATAAATGAT
128 AAGGATCTTCATTCATTTCATGGTTAGGCACTA-TAAACACATTCTCCCCAATAGGATAAATGAT
*
244918 ATTGATGGTTTTCTTTTGCGTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGT
192 ATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGT
* * * ** *
244983 ACTTTAAATGAGACACGCGTTGATTCTCGCAAAAGTCTCCATTCTTTTGAAGATTAGGAACCAAA
257 ACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAA
* * * *
245048 AACAAATTCCTTTCATTAGGATACATGACATTGACGCTTTGGTGTTGCAAGAGAAGCTTTTCTTT
322 AACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTT
* * * *
245113 CCACCGTTATTGATAGAATCAAAG-TTGTCTCTTAAATAATACAAACATGAATACTCATACTAAT
387 CCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAAT
* *
245177 CC-CTATTCTTTTCAGGATTAGGCGT
452 CCACT-TTCTTTTCTGGATTAGGC-A
* * * * * * * *
245202 TATAAACATAGCCTTTTCATAAGGATACATGATCTTGATGCTTTGG-TTCGCAGGATACGCTTTC
1 CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTTC
** * ** * * *
245266 TTCCCACCAATTTTTGTGAGGTATGAGTTCATTGCTCAAATGAGACAAACATGGATTCTTGCAAG
66 TTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAAG
* * * * ** *
245331 GATCTTCATTCATTTCGTGATTAGGCATTATAAACACATTCTCCTCTTTAGGATAAATGATATTT
131 GATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATTG
* * * *
245396 ATGGTTTTCTTTTGCATGGAAATCTTTTCTGTGTCTTATTTTCCTTAAAATTAAAGTTTGTACTT
196 ATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTT
* * * * *
245461 TAAATGAGACATGCATTGATTCTCGTAAAAGTCTCTATTCTTTTCAACATTGGGAATCAAAAACA
261 TAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAACA
* * * * **
245526 CATTCCCTTTATTAGGATACAAGACATTGATGTTTTGTTGTAACAAGAGAAGCTTTTCTTTCC-A
326 CATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCAA
* * * * * * * * *
245590 CTATTATTGATAGAATGAAAGTCTATCTCTCAAATAAGATAAACATTAATACTCATACTAATCCA
391 C-GTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCA
*
245655 CATTCTTTTCTGGATTAGGCA
455 CTTTCTTTTCTGGATTAGGCA
* * * ** **
245676 CCATAAACAAAGTCTTCTAAT-AGTGATACATGATATTGATGCTTTGGTTTCACAAGAAACATTT
1 -CATAAACATAGTCTTCTCATAAG-GATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTT
* * * * * * * * *
245740 TCTTCCCACCAATTTTTGTAAA-TTCAAATTTCGTGCCGCAAATAAGACAACCGTGGATTCTAGT
64 TCTTCCCACCAATTTTTGAAAAGTAC-AAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGT
* * * * * * *
245804 TAGGATCTTCATTCAATTCATGATTAGGCACTACAAAACACATTCTTCTCATTAGGATAAATGAT
128 AAGGATCTTCATTCATTTCATGGTTAGGCACTA-TAAACACATTCTCCCCAATAGGATAAATGAT
* * * *
245869 ATTTATGGTTTTCTTTTGCGTCGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTCT
192 ATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGT
* * * *
245934 ACTTTAAATGAGACATGCATTGATTCTCGCAAAGGTCTCCATTCTTTCCAAGATTGGCAACCAAA
257 ACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAA
* * * *
245999 AACACGTTCCTTTCACTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAACTTTTCTTT
322 AACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTT
* * * *
246064 CCACCGTTATTGATAGAATCAAAG-TTGTCTCTTAAATAAGACAAACATGAAAACTCATACTAAT
387 CCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAAT
* * *
246128 CC-CATTCTTTTCAGGATTAGGTA
452 CCACTTTCTTTTCTGGATTAGGCA
* * * ** *
246151 CCATAAACATAGCCTTCTCATAAGGATACATGATTTTGATGCTTTGGTTTCACAAGATACGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * ** * * * * *
246216 CTTCCCACCAATTTTTGTAAGGTATGAGTTCATTGCTCAAATAAGACAAACATGGATTTTTGTAG
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA
* * * * * **
246281 GGATCTTCATTCATTTC-GGGATTAGGCACTATAAGCATATTCTGCTCTTTAGGATAAATGATAT
130 GGATCTTCATTCATTTCATGG-TTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATAT
* * * *
246345 TTATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTAC
194 TGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTAC
* * * *
246410 TTTAAATGAGATATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAA
259 TTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAA
*
246475 GACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
324 CACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
* * * *
246540 ATCGTTATTGATAGAATCAAAG-TTGTCTCTTAAATAAGGCAAA-ATTGAATACTCATACTAATC
389 AACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACA-TGAATAGTCATACTAATC
*
246603 C-CTATTCCTTTT-AGGATTAGGCA
453 CACT-TT-CTTTTCTGGATTAGGCA
* * * * *
246626 CCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCGCAGGATACGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* ** * * ** * *
246691 CTTCCC-CACAATTTTTGTAAAGTATGAGTTAATTGCTCAAATGAGACAAACACAGATTCTTGCA
65 CTTCCCAC-CAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTA
* ** * * * **
246755 GGGATCTTCATTCATTTTGTGATTAGGCACTATATACACATTCTCCTCTTTAGGATAAATGATAT
129 AGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATAT
* * * * * *
246820 TTATGGTTTTCTTTTGCATGGAAATCTTCTCTTTGTCAT-TTTTCCTTAATATCAAAGTTTGTAC
194 TGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTAC
* * * * **
246884 TTTAAACGAGACATGCGTTGATTCTCGCAAAAGTCTCCATTCTTTTAAAGATTGGGAACCAAAAA
259 TTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAA
** *
246949 CACATTCATTTCATTAGGATACATGACATTGAGGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
324 CACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
* ** * * * *
247014 ACCGTTGCTGATAGAATCAAAG-TTGTCTCTT-AATGAACACAAATATGAATACTCATACTAATC
389 AACGTTATTGATAAAATCAAAGTTTGTCTCTTAAAT-AAGACAAACATGAATAGTCATACTAATC
* ** * *
247077 CACATTCCATTCAGGTTTAGGCA
453 CACTTTCTTTTCTGGATTAGGCA
* * * ** * * *
247100 CCATAAACATAGTCTTCTCATAAGGATACATGATCTTGTTGCTTTCATTTCGCAACATACGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * ** * * * * *
247165 CTTCCCCCCAATTTTTGTAAAGTATGAGTTTATTCCTCAAAAGAGAC-AACATGGATTGTTGTAG
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA
* * * * **
247229 GGATCTTCATTCATTTCGTGATTAGGCACTATAAATACATTCTCCTCTTTAGGATAAATGATATT
130 GGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATT
* * *
247294 TATGGTTTTCTTTTGCATGGAAAT-TTTTGCTTTGTCTTATTTTCCTTAAAATCAAAGTTTGTAC
195 GATGGTTTTCTTTTGCCTGGAAATCTTTT-CTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTAC
* * * * *
247358 ATTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATT-TTTTCAACATTGGGAATCAAAAA
259 TTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAA
* * * * * * *** *
247422 CACATTCTCTTTATTAGGATACAAGACAATGATGTTTTAGTGGAACAAGAGAAGCTTTTCCTTCC
324 CACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
*** * ** *
247487 ATTATTATTGATAGAATCAAAGTTCCTCTCTTAAATAAGACAAACATGAATACTCATACTAATCC
389 AACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCC
* *
247552 ACATTCTTTTCAGGATTAGGCA
454 ACTTTCTTTTCTGGATTAGGCA
* * * ** **
247574 CGATAAACAAAGTCTTCTAATAAGGATACATGATATTGATGCTTTGGTTTCACAAGAAACATTTT
1 C-ATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * * * * * * * * * *
247639 CTTCCCACCAATTTTTGTAAA-TTCAAATTTCGTGCCCCAAATGGGACAAGCGTGGATTCCAGTT
65 CTTCCCACCAATTTTTGAAAAGTAC-AAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTA
* * * * * *
247703 AGGATCTTCATTCAATTCATGATTAGGCACTACAAAACACATTCTTCCCATTAGGAAAAATGATA
129 AGGATCTTCATTCATTTCATGGTTAGGCACTA-TAAACACATTCTCCCCAATAGGATAAATGATA
* *
247768 TTGATGGTTTTCTTTTGCGTGGTAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTA
193 TTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTA
* * * * * *
247833 CTTTAAATGAGACACGCGTTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAGA
258 CTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAA
* ** *
247898 ACAAATTCTTTTCATTAGGATACATGACATTGATGCTTTGGTGTTGCAAGAGAAGCTTTTCTTTC
323 ACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTC
* * * *
247963 CACCGTTATTGATAGAATCAAA-ATTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATC
388 CAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATC
*
248027 C-CTATTCTTTTCAGGATTAGGCA
453 CACT-TTCTTTTCTGGATTAGGCA
* * * * * * *
248050 TCATAAACATAGCCTTTTCATAAGGATACATGATCTTGATGCTTTGG-TTCGCAGGATACGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * ** * *** *
248114 CTTCCCACCAATTTTTGTAAGGTATGAGTTCATTGCTCAAATGAGACAAACATGGATTCTTCCAG
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA
* * * * ** *
248179 GGATCTTCATTCATATCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGAATAAATGATATT
130 GGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATT
* * * * *
248244 TATTGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCTTATTTTCCTTAAAATCAAAGTTTATACT
195 GATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACT
* * * * *
248309 TTAAATGAGACATGCGTCGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAAC
260 TTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAAC
* ***
248374 ACCTTAATTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCA
325 ACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCA
* * * * * *
248439 TCATTGTTGATAGAATCAAAG-TTGTCGCTTAAATAAGACAAATATGAATTA-TCATACTAATCC
390 ACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAA-TAGTCATACTAATCC
* * * *
248502 ACATTCCTTTCAGGATTAAGCA
454 ACTTTCTTTTCTGGATTAGGCA
* * * * *
248524 CCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTTGCAAGATACGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * * * * * * *
248589 CTTCCCACCAATTTTTGTAAAGCATGAGGTT-ATTGCTCAAATGAGACAAACATCGATTCTTGCA
65 CTTCCCACCAATTTTTGAAAAGTA-CAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTA
* * * * **
248653 AGGATCTTTATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATAT
129 AGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATAT
* * * *
248718 TTATGATTTTCTTTT-CCATGGAAATCTTTTCTTTGTCTTATTTTCCTTAAAATCAAAGTTTATA
194 TGATGGTTTTCTTTTGCC-TGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTA
* * * * * *
248782 CTTTATATGAGACATGCATTGATTCTCGTAAAAGTCTCTATTCTTTTCAACATTGGGAATCAAAA
258 CTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAA
* * * * **
248847 ACACATTCCCTTTATTAGGATACAAGACATTGATGTTTTGTTGTAACAAGAGAAGCTTTTCTTTC
323 ACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTC
* * * * * * * *
248912 C-ACTATTATTGATAGAATCAAATTTTATCTCTCAAATAAGATAAACATTAATACTCATACTAAT
388 CAAC-GTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAAT
248976 CCA-TATTCTTTTCTGGATTAGGCA
452 CCACT-TTCTTTTCTGGATTAGGCA
* * * * ** **
249000 CCATAAACAAAGTCTTCTAATAATGATACATGATATTGATGCTTTGGTTTCACAAGAAACATTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * * * * * * *
249065 CTTCCCACCAATTTTTGTAAA-TTCAAATT-TTGTGCCCCAAATGAAACAAGCATGGATTCAAGT
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCAT-T-CCTCAAATGAGACAAACATGGATTCTAGT
* * * * * **
249128 AAAGATCTTCATTCATTTCATGATTAGGCACTACAAAACACATTCTTCTCGTTAGGATAAATGAT
128 AAGGATCTTCATTCATTTCATGGTTAGGCACTA-TAAACACATTCTCCCCAATAGGATAAATGAT
* * * * * *
249193 ATTAATAGTTTTCTTTTGCGTTGAAATCTTTTTTTTGCCTTATTTTCCTTAAAATCAATGTTTGT
192 ATTGATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGT
* * * * *
249258 ACTTTAAATGAGACACGCGTTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAA
257 ACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAA
* * *
249323 AACAAATTCCCTTCATTATGATACATGACATTGATGCTTTGGTGTTGCAAGAGAAGCTTTTCTTT
322 AACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTT
* * *
249388 CCACCGTTATTGATAGAATCAAAG-TTGTCTCTTAAATAAGACAAACATGAATACTCATACTAAT
387 CCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAAT
* *
249452 CC-CTATTCTTTTCAGGAATAGGCA
452 CCACT-TTCTTTTCTGGATTAGGCA
* * * * * ** * *
249476 TTATAAACATAGCCTTTTCATAAGGATACATGATCTTGATGCTTTGG-TTCACAGGATACGCTTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTT
* * * ** * * * * *
249540 CTTCCCACCAATTTTCGTAAGGTATGACTTCATTGCTCAAATAAGACAAACATGGATTCTTGTAG
65 CTTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAA
* * * **
249605 GGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATT
130 GGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATT
* * *
249670 TATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCTTATTTTCCTTAAAATCAAAGTTTGTACT
195 GATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACT
** * * ** ** * * *
249735 ACAGATGAGACATGCATTGATTCTCGTAAAAGTCTCTTTTCTTTTTAACATTAGGAATCAAAAAC
260 TTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAAC
* * * * * *
249800 ACATTCCCTTTATTAGGATACAAGATATTGATGTTTTAGTG-GGACAAGAGAAGCTTTTCTTTCC
325 ACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCG-CAAGAGAAGCTTTTCTTTCC
* * * * *
249864 -ACTATTATTGATAGAATCAAAGTTTCTCTCTCAAATAAGACAAACATGAATACTCATACTAATC
389 AAC-GTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATC
* *
249928 CACATTCTTTTCTGGATTACGCA
453 CACTTTCTTTTCTGGATTAGGCA
* * * * * **
249951 CCGTAAACAAAGTCTTCTAATAAGGATGCATGATATTGATGCTTTGGTTTCAG-AAGAAACATTT
1 -CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTC-GTAAGAAACGCTT
* * * * * * *
250015 TCTTCCCACCAATTTTTGTAAA-TTCAAATTTCGTGCCCCAAATGAGACAAGCATGGA-T-TAGT
64 TCTTCCCACCAATTTTTGAAAAGTAC-AAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGT
* * * * *
250077 AAGGATCTTCATTCATTTCATGATTAGGCACTACAAAACACATTCTTCTCATTAGGATAAATGAT
128 AAGGATCTTCATTCATTTCATGGTTAGGCACTA-TAAACACATTCTCCCCAATAGGATAAATGAT
250142 ATTGAT
192 ATTGAT
250148 ACAAGACATT
Statistics
Matches: 65527, Mismatches: 10007, Indels: 6044
0.80 0.12 0.07
Matches are distributed among these distances:
438 36 0.00
439 15 0.00
440 13 0.00
441 69 0.00
442 216 0.00
443 3 0.00
446 6 0.00
447 10 0.00
448 1 0.00
449 1 0.00
450 382 0.01
451 7 0.00
452 15 0.00
454 2 0.00
455 6 0.00
456 14 0.00
457 316 0.00
458 71 0.00
459 2 0.00
460 1 0.00
461 3 0.00
462 13 0.00
463 258 0.00
464 98 0.00
465 194 0.00
466 66 0.00
467 89 0.00
468 41 0.00
469 376 0.01
470 192 0.00
471 282 0.00
472 1211 0.02
473 2831 0.04
474 13727 0.21
475 27859 0.43
476 11387 0.17
477 1697 0.03
478 115 0.00
479 66 0.00
480 30 0.00
481 37 0.00
482 26 0.00
483 5 0.00
484 20 0.00
485 23 0.00
486 19 0.00
487 23 0.00
488 34 0.00
489 33 0.00
490 35 0.00
491 17 0.00
492 37 0.00
493 84 0.00
494 69 0.00
495 90 0.00
496 131 0.00
497 75 0.00
498 95 0.00
499 96 0.00
500 99 0.00
501 89 0.00
502 93 0.00
503 107 0.00
504 98 0.00
505 122 0.00
506 117 0.00
507 77 0.00
508 90 0.00
509 75 0.00
510 61 0.00
511 45 0.00
512 28 0.00
513 35 0.00
514 49 0.00
515 31 0.00
516 31 0.00
517 41 0.00
518 31 0.00
519 68 0.00
520 63 0.00
521 65 0.00
522 49 0.00
523 63 0.00
524 109 0.00
525 112 0.00
526 92 0.00
527 99 0.00
528 87 0.00
529 71 0.00
530 65 0.00
531 83 0.00
532 68 0.00
533 28 0.00
534 8 0.00
535 15 0.00
536 29 0.00
537 34 0.00
538 44 0.00
539 36 0.00
540 12 0.00
541 12 0.00
542 4 0.00
543 10 0.00
544 15 0.00
545 7 0.00
546 5 0.00
547 7 0.00
548 6 0.00
549 13 0.00
550 12 0.00
551 14 0.00
552 7 0.00
553 3 0.00
554 10 0.00
555 6 0.00
556 3 0.00
557 4 0.00
558 4 0.00
559 9 0.00
560 5 0.00
561 5 0.00
562 11 0.00
563 16 0.00
564 9 0.00
565 1 0.00
566 1 0.00
567 3 0.00
568 2 0.00
570 1 0.00
573 2 0.00
575 2 0.00
577 4 0.00
578 3 0.00
579 6 0.00
580 8 0.00
581 7 0.00
582 1 0.00
ACGTcount: A:0.30, C:0.18, G:0.15, T:0.36
Consensus pattern (475 bp):
CATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTTC
TTCCCACCAATTTTTGAAAAGTACAAGTTCATTCCTCAAATGAGACAAACATGGATTCTAGTAAG
GATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATGATATTG
ATGGTTTTCTTTTGCCTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTT
TAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAACA
CATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCAA
CGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCAC
TTTCTTTTCTGGATTAGGCA
Found at i:172955 original size:952 final size:951
Alignment explanation
Indices: 171111--183273 Score: 13862
Period size: 952 Copynumber: 12.9 Consensus size: 951
171101 AGGTGTCTAC
* * *
171111 AGGCGCCATAAACATAGTCTTCCCATAAGGATACATGATATCAATGCTTTGGTTTCGTAAGAAAC
1 AGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAAC
* * * * * * *
171176 GCTTTCTGCCTGCCAATTTTTGAAAAGCATAATTCCAATCCTCAAATTAGACAAACAAGGATCCT
66 GCTTTCTTCCTACCAATTTTTGAAAAGCATAATTTCAGTCCTCAAATGAGACAAACATGGATTCT
* * * ** * * *
171241 AGTGAGCATTTTCATTCATTTTATGGTTAGGCACTAGAAACACATTCTCCCCAATAGGATTAATG
131 AGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCCCAATAGGATAAATG
* * *
171306 ATATTGATGGTTTTCTTTTGCCACAAAATTTTTTCTTTGTCTTATTTTCCTTAAAATCAAAGTTT
196 ATATTGATGGTTTTCTTTTGCCAGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTT
* * * * *
171371 GTACTTTAAATAAGACATGTC-TTGATTCTCATAAAAGTCTCCATTCTTTTC-AGCATTGGGAGC
261 GTACTTTAAATGAGACAAG-CATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAG-ATTGGGAAC
* *
171434 CAAAAACACATTCCCTTCGTTAGGATACAAGACATTGATGCTTTGGTGTCGCAAGAGAAGCTGTT
324 CAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTGTT
* * *
171499 CTCCCCACCGTTATTGATAGAATCAAAGTTTGTCTCTCAAATAAGACAAACATGAATAGTCATAC
389 CTCCCCACCGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATAC
171564 TAATCCACTTTCTTTTTTGAATTAGGCACAGCAAACATAGTCTTCTCATAACGATACATGATATC
454 TAATCCACTTTCTTTTTTGAATTAGGCACA-CAAACATAGTCTTCTCATAACGATACATGATATC
* * * *
171629 GATGCTTTGGTTTCGTAAGAAATGCTTTCTTCCCACCAATTTTTG-AGAAGTAC-AAGTTCATTC
518 GATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAATTTTTGTA-AA-TTCTAAGTTCATGC
* *
171692 CCCAAATGAGACAAACATAGATTCTAGTAAGGATCTTCATTCATTTCATGGTTAAGCA-TAATAA
581 CCCAAATGAGACAAACATAGATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCACT-ATAA
* * ** * * *
171756 ACACATTTTCCCCAACAGGATAAATGATATTGATGGTTTTCTTCTACGTGGAAATCTTTTCTTTG
645 ACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTG
* *
171821 CCTTATTTTCCTTAAAATCAAAGCTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTG
710 CCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTC
* * * *
171886 TCCATTCTTTCCATGATTAGGAACCAAAAACGCAATT-CCTTCATTAGAATACATGACATTGATG
775 TCCATTCTTTCCAAGATTGGGAACCAAAAACAC-ATTCCCTTCATTAGGATACATGACATTGATG
* * ** * *
171950 CTTTGGTGTCGCAATAGAAGCTTTTCTTTCAAACAATGTTTATAAAATCAAAGTTTGTCTCTTAT
839 CTTTGGTGTCGCAAGAGAAGCTTTTCTTTCTAACGTTGTTGATAAAATCAAAGTTTGTCTCTTAA
172015 ATAAGACAAACATGAATAGTCATACTAATCCACTTTCTTTTCTGGATT
904 ATAAGACAAACATGAATAGTCATACTAATCCACTTTCTTTTCTGGATT
* * * *
172063 AGGCGCCATAAACATAGTCTTCCCATAAGGATACATGATATCAATGCTTTGGTTTCGTAAGAAAT
1 AGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAAC
* * * * * *
172128 GCTTTCTGCCTGCCAATTTTTGAAAAGCATAATTTCAATCCTCAAATTAGACAAACAAGGATCCT
66 GCTTTCTTCCTACCAATTTTTGAAAAGCATAATTTCAGTCCTCAAATGAGACAAACATGGATTCT
* * * ** * * * *
172193 AGTGAGCATTTTCATTCATTTTATGGTTAGGCACTAGAAACACATTCTCCCCAATAGGATTAATC
131 AGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCCCAATAGGATAAATG
* * * * *
172258 ACATTGATGGTTTTCCTTTGCCACAAAATTTTTTCTTTGTCTTATTTTCCTTAAAATCAAAGTTT
196 ATATTGATGGTTTTCTTTTGCCAGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTT
* * * * *
172323 GTACTTTAAATAAGACATGTC-TTGATTCTCATAAAAGTCTCCATTCTTTTC-AGCATTGGGAGC
261 GTACTTTAAATGAGACAAG-CATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAG-ATTGGGAAC
* *
172386 CAAAAACACATTCCCTTCGTTAGGATACAAGACATTGATGCTTTGGTGTCGCAAGAGAAGCTGTT
324 CAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTGTT
* * *
172451 CTCCCCACCGTTATTGATAGAATCAAAGTTTGTCTCTCAAATAAGACAAACATGAATAGTCATAC
389 CTCCCCACCGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATAC
*
172516 TAATCCACTTTCTTTTTTGAATTAGGCACAGCAAACACAGTCTTCTCATAACGATACATGATATC
454 TAATCCACTTTCTTTTTTGAATTAGGCACA-CAAACATAGTCTTCTCATAACGATACATGATATC
* * * *
172581 GATGCTTTGGTTTCGTAAGAAATGCTTTCTTCCCACCAATTTTTG-AGAAGTGC-AAGTTCATTC
518 GATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAATTTTTGTA-AA-TTCTAAGTTCATGC
* *
172644 CCCAAATGAGACAAACATAGATTCTAGTAAGGATCTTCATTCATTTCATGGTTAAGCA-TAATAA
581 CCCAAATGAGACAAACATAGATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCACT-ATAA
* ** * * *
172708 ACACATTCTCCCCAACAGGATAAATGATATTGATGGTTTTCTTCTACGTGGAAATCTTTTCTTTG
645 ACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTG
* *
172773 CCTTATTTTCCTTAAAATCAAAGCTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTG
710 CCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTC
* * * *
172838 TCCATTCTTTCCATGATTAGGAACCAAAAACGCAATT-CCTTCATTAGAATACATGACATTGATG
775 TCCATTCTTTCCAAGATTGGGAACCAAAAACAC-ATTCCCTTCATTAGGATACATGACATTGATG
* * ** * *
172902 CTTTGGTGTCGCAATAGAAGCTTTTCTTTCAAACAATGTTTATAAAATCAAAGTTTGTCTCTTAT
839 CTTTGGTGTCGCAAGAGAAGCTTTTCTTTCTAACGTTGTTGATAAAATCAAAGTTTGTCTCTTAA
172967 ATAAGACAAACATGAATAGTCATACTAATCCACTTTCTTTTCTGGATT
904 ATAAGACAAACATGAATAGTCATACTAATCCACTTTCTTTTCTGGATT
* * *
173015 AGGCGCCATAAACATAGTCTTCCCATAAGGATACATGATATCAATGCTTTGGTTTCGTAAGAAAC
1 AGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAAC
* * * * * *
173080 GCTTTCTGCCTGCCAATTTTTGAAAAGCATAATTTCAATCCTCAAATTAGACAAACAAGGATCCT
66 GCTTTCTTCCTACCAATTTTTGAAAAGCATAATTTCAGTCCTCAAATGAGACAAACATGGATTCT
* * * ** * * * *
173145 AGTGAGCATTTTCATTCATTTTATGGTTAGGCACTAGATACACATTCTCCCCAATAGGATTAATG
131 AGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCCCAATAGGATAAATG
* * *
173210 ATATTGATGGTTTTCTTTTGCCACAAAATTTTTTCTTTGTCTTATTTTCCTTAAAATCAAAGTTT
196 ATATTGATGGTTTTCTTTTGCCAGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTT
* * * * *
173275 GTACTTTAAATAAGACATGTC-TTGATTCTCATAAAAGTCTCCATTCTTTTC-AGCATTGGGAGC
261 GTACTTTAAATGAGACAAG-CATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAG-ATTGGGAAC
* *
173338 CAAAAACACATTCCCTTCGTTAGGATACAAGACATTGATGCTTTGGTGTCGCAAGAGAAGCTGTT
324 CAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTGTT
* * * *
173403 CTCCCCACCGTTATTGATAGAATCAAAGTTTGTCTCTCAAATAAGACAAACATGAATAGTTATAC
389 CTCCCCACCGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATAC
173468 TAATCCACTTTCTTTTTTGAATTAGGCACAGCAAACATAGTCTTCTCATAACGATACATGATATC
454 TAATCCACTTTCTTTTTTGAATTAGGCACA-CAAACATAGTCTTCTCATAACGATACATGATATC
* * * *
173533 GATGCTTTGGTTTCGTAAGAAATGCTTTCTTCCCACCAATTTTTG-AGAAGTAC-AAGTTCATTC
518 GATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAATTTTTGTA-AA-TTCTAAGTTCATGC
* * *
173596 CCCAAATGAGACAAACATAGATTCTAGTAAGGATCTTCATTCATTTCATGGTTAAGCACAATAAA
581 CCCAAATGAGACAAACATAGATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCACTATAAA
* * * * *
173661 CACATTCTCCCCAATAGGATAAATGATATTGATGGTTTTCTTTCGCCTCGAAATCTTTTCTTTGC
646 CACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGC
* *
173726 CTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATAGATTCTCGAAAAAGTCT
711 CTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCT
* * *
173791 CCATTCTTTCCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGAATACCTGACATTGTTGCT
776 CCATTCTTTCCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCT
* **
173856 TTCGTGTCGCAAGAGAAGCTTTTCTTTCTAATATTGTTGATAAAATCAAAGTTTGTCTCTTAAAT
841 TTGGTGTCGCAAGAGAAGCTTTTCTTTCTAACGTTGTTGATAAAATCAAAGTTTGTCTCTTAAAT
173921 AAGACAAACATGAATAGTCATACTAATCCACTTTCTTTTCTGGATT
906 AAGACAAACATGAATAGTCATACTAATCCACTTTCTTTTCTGGATT
* * * * * *
173967 AGGCACCGTAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCGCAAGATAT
1 AGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAAC
* * * * * * *
174032 GCTTTCTT-CTCACCAATTTTTGTAAAGTATGAGTTCATTGCTCAAACGAGACAAACATGGATTC
66 GCTTTCTTCCT-ACCAATTTTTGAAAAGCATAATTTCAGTCCTCAAATGAGACAAACATGGATTC
* * * * * * **
174096 TTGTAGGGATTTTCATTAATTTCCTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAAT
130 TAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCCCAATAGGATAAAT
* * *
174161 GATATTGATGGTTTTCTTTTGCCTGGAAAA-CTTTTCTTTGCCTTATTTTCCTTAAAATTAAAGA
195 GATATTGATGGTTTTCTTTTGCC-AGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGT
* * *
174225 TTGCACTTTAAATGAGACAAGCATAGATTCTCGTAAAAGTCTCCACTCTTTCCAAGATTGGGAAC
259 TTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAAC
* * *
174290 CAAAAACACATTCCCCTCATTAGAATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGTTGTT
324 CAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTGTT
*
174355 CTCCCCACCGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATAC
389 CTCCCCACCGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATAC
* *** * * * * **
174420 AAATCTGTTTTCTTTTCTGGATTAGGTACCATAAACATAGTCTTCTCATATGGATACATGATATC
454 TAATCCACTTTCTTTTTTGAATTAGGCA-CACAAACATAGTCTTCTCATAACGATACATGATATC
* * * * *
174485 GATGCTTTGGTTTCACAAGAAATGCTTTCCTCCCACCAATTTTTGTAAATTCTAAGTTAATGCCT
518 GATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAATTTTTGTAAATTCTAAGTTCATGCCC
* ** * *
174550 AAAACAAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCACTATAAATA
583 CAAATGAGACAAACATAGATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCACTATAAACA
* * * *
174615 CATTCTCCTCATTAGGATAAATGATATTGATGGTTTTTTTTTGAATGAAAATATTTTCTTTGCCT
648 CATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCT
* * * *
174680 TACTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAAACAAGCATTAATTCTCGTAAAATTCTCC
713 TATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCC
* * *
174745 ATTTTTTCCAAGATTGGGAACC-AAAACATATTCCCTTCATTAGGATACATGACATTGACGCTTT
778 ATTCTTTCCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTT
* *
174809 GGTGTCTCAAGAGAAGCTTTTTTTTCTAACGTTGTTGATAAAATC-AAGTTTGTCTCTTAAATAA
843 GGTGTCGCAAGAGAAGCTTTTCTTTCTAACGTTGTTGATAAAATCAAAGTTTGTCTCTTAAATAA
* * * * * *
174873 GGCAAACTTGAATACTCATACTAATCCCCATTCTTTTCAGGATT
908 GACAAACATGAATAGTCATACTAATCCACTTTCTTTTCTGGATT
* * * * * *
174917 AGCCACCATAAACATAGTCTTCTGC-TACGGATACAGGATATTGATGATTTGGTTT-GCT-AGGA
1 AGGCACCATAAACATAGTCTTCT-CATAAGGATACATGATATCGATGCTTTGGTTTCG-TAAGAA
* * * * * ** * *
174979 ATGCTTTTTTCCCA-CAATTTTTCTAGATTC-T-ATGTTC-GTGCATCAAATGAGACAAATATGG
64 ACGCTTTCTTCCTACCAATTTTT-GAAAAGCATAAT-TTCAGT-CCTCAAATGAGACAAACATGG
* * *
175040 ATTCTAGTAAGGATCATCATTCATTTCGTGATTAGGCTCTATAAACACATTCTTCTCC--TCAGG
126 ATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTC-TCCCCAAT-AGG
** * ** * * *
175103 ATGCACGATATTGATGGTTTTCTTTTGCTTGAAAATCTTCTCTTTGCCTCACTTTCCTTAAAATC
189 ATAAATGATATTGATGGTTTTCTTTTGCCAGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATC
*
175168 AAAGATTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTG
254 AAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTG
* * *
175233 GGAACCAAAAACACATTCTCTTCATTAGGATATATGACATTAATGCTTTGGTGTCGCAAGAGAAG
319 GGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAG
* ** * * * * * *
175298 CTTTTCTTTCCAACGTTATTGATAAAATCAAAGTTTGTCCCTCAAATAAGGCAACCTTGAATACT
384 CTGTTCTCCCCACCGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACT
* * * * * * * *
175363 TATACTAATCCACATTCTTTTTAGGATTAGGCACCCTCAACATAGTCTTCCCAT-ACGGATACAA
449 CATACTAATCCACTTTCTTTTTTGAATTAGGCACAC-AAACATAGTCTTCTCATAAC-GATACAT
* * * * *
175427 GATATTGATGAC-TTAGTTTTGCAAGAAACGTTTTTTTCCCACCAATTTTTGTAAATTCTAAGTT
512 GATATCGATG-CTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAATTTTTGTAAATTCTAAGTT
* * * * *
175491 CATGCCTCAAATGGGACTAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACT
576 CATGCCCCAAATGAGACAAACATAGATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCACT
*
175556 ATAAACACATTCTCCTCTTTAGGATAAATGATATTGATGGATTTT-TTTTGCATGGAAATCTTTT
641 ATAAACACATTCTCCTCATTAGGATAAATGATATTGATGG-TTTTCTTTTGCATGGAAATCTTTT
* ** * * * * *
175620 CATTATCTTATTTTCCTTAAAATCAATGTTTGTACCTTAAATAAGACATGCGTTGATTCTCGTAA
705 CTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAA
* * *
175685 AAGTCTCCATTCTTTTCAGGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACAGT
770 AAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATT
* ** * * ** *
175750 GATGCTTTGGTGTCGCAAGAAAAG-TTGTTCTCCCCACCGTCATTGATAGAATCAAAGTTTGTCT
835 GATGCTTTGGTGTCGCAAGAGAAGCTT-TTCTTTCTAACGTTGTTGATAAAATCAAAGTTTGTCT
*
175814 CTTAAATAAGACAAACATGAATAGTCATACTAATCCGCTTTCTTTTCT-GATT
899 CTTAAATAAGACAAACATGAATAGTCATACTAATCCACTTTCTTTTCTGGATT
175866 AGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAAC
1 AGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAAC
* * * * * *
175931 GCTTTCTTCCCACAAATTCTAGAAAAGTATAAGTTT-ATTTCC-CAAATGAGACAAACATGGATT
66 GCTTTCTTCCTACCAATTTTTGAAAAGCATAA-TTTCA-GTCCTCAAATGAGACAAACATGGATT
* * *
175994 CTAGTAAGGATCTTCATTCATTTCATGGTTAGGCACTATAAACACATTCTCCCCAAGAGGATAAA
129 CTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCCCAATAGGATAAA
* * ** * *
176059 TGATATTGATGGTTTTCTTCTACTTGGAAATCTTTTCTTTGCCTTATTTTTCTTAAAATCAAAGT
194 TGATATTGATGGTTTTCTTTTGCCAGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGT
* * * * * * ** *
176124 TTGCACTTTAAATAAGACATGCATTGACTT-TTGTAAAAGTCTCCATTTTTTTCACCATTGGGAG
259 TTGTACTTTAAATGAGACAAGCATTGA-TTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAA
176188 CCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTGT
323 CCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTGT
* * *
176253 TCTCCCCACCGTCATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATA
388 TCTCCCCACCGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATA
* * * *
176318 CTAATCCGCTTTCTTTTCTG-ATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATAT
453 CTAATCCACTTTCTTTTTTGAATTAGGCA-CACAAACATAGTCTTCTCATAACGATACATGATAT
* * ** *
176382 CGATGCTTTGGTTTCGTAAGAAACGCTTTCTTCCTACCAATTTTTG-AAAAGCATAAGTTCATTC
517 CGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAATTTTTGTAAATTC-TAAGTTCATGC
* * * * * *
176446 CTCAGATTAGACAAACA-AGGATTCTAGTAAGGATCTTCATTCATTTCGTGGTTAGGCATTATAA
581 CCCAAATGAGACAAACATA-GATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCACTATAA
* * * * * *
176510 ACACATTCTCCCCAATAGGATAAATGATATTGACGGTTTTCTTTTGCCTGGAAATTTTTTCATTG
645 ACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTG
* * * * *
176575 TCTTATTTTTCTTAAAATCAAAGTTTGTACTTTAAATAAGACATGCATTGATTCTCATAAAAGTC
710 CCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTC
* * * * *
176640 TCCATTCTTTTCAACATTTGGAGCCAAAAACACATTCCCTTCCTTAGGATACATGACATTGATGC
775 TCCATTCTTTCCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGC
* * * ** * * * *
176705 TTTGGCGTTGCAAGAGAAGCTGTTCTCCCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAA
840 TTTGGTGTCGCAAGAGAAGCTTTTCTTTCTAACGTTGTTGATAAAATCAAAGTTTGTCTCTTAAA
176770 TAAGACAAACATGAATAGTCATACTAATCCACTTTCTTTTCTGGATT
905 TAAGACAAACATGAATAGTCATACTAATCCACTTTCTTTTCTGGATT
** *
176817 AGGCACCATAAAC--AGTCTTCTCATAAGGATACATGATATCGATGCTTCAGCTTCGTAAGAAAC
1 AGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAAC
* * * * * *
176880 GCTTTCTTCCCACCAATTTTTTAAAAGTATAAGTTCATTCCTCAAATAAGACAAACATGGATTCT
66 GCTTTCTTCCTACCAATTTTTGAAAAGCATAATTTCAGTCCTCAAATGAGACAAACATGGATTCT
* *
176945 AGTAAGGATCTTCGTTCATTTCGTGGTTAGGCACTATAAACACATTCTCCCCAATAGGATAAATG
131 AGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCCCAATAGGATAAATG
* * * * * *
177010 ATATTGATGGTTTTTTTTTACCTGGAAATCTTTTCTTGGCCTTATTTTCCATAAAATCAAAGTTT
196 ATATTGATGGTTTTCTTTTGCCAGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTT
* **
177075 GTACTTTAAATGAGACAAGCATAGATTCTCGTAAAACCCTCCATTCTTTCCAAGATTGGGAACCA
261 GTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCA
* * * * *
177140 AAAACACATTCCCTTCATTAGGACACATGACATTGATACTTCGATGTCGCAAGAGAAGCTTTTCT
326 AAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTGTTCT
** * * * * ** *
177205 TTCTAACGTTGTTGATAAAATCAAAGTTTATCTCTTAAATAAGGTAAACTTGAATACTCATACTA
391 CCCCACCGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTA
* ** * * * * *
177270 ATCCA-TATTCTTTTTACG-ATTAACCACCATAAACATAGTGTTTTCATAAGGATACATGATATT
456 ATCCACT-TTCTTTTT-TGAATTAGGCA-CACAAACATAGTCTTCTCATAACGATACATGATATC
* *
177333 GATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTGTAAATTCTAAGTTCGTGCCC
518 GATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAATTTTTGTAAATTCTAAGTTCATGCCC
* * * * *
177398 TAAATGAGACAAACATGGATTCTATTAGAGG-TTTTCATTCATTTCGTGATTAGGCACTATAAAC
583 CAAATGAGACAAACATAGATTCTAGTA-AGGATCTTCATTCATTTCATGATTAGGCACTATAAAC
* * * *
177462 ACATTCTCCTCATTCGGATAAATGATATTCATGTTTTTCTTTTGCATGCAAATCTTTTCTTTGCC
647 ACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCC
** * * *
177527 TTA-TTTCGATAAAATCGAAGTTTGTACTTTAAATGAGACAAGCATTGATTCGCCTAAAAGTCTC
712 TTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTC
* * *
177591 CATTTTTTCCAAGATTGGGAACCAAAAACACATTCCCTTCATTACGATACATTACATTGATGCTT
777 CATTCTTTCCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTT
* *
177656 TGGTGTCGCAAGAAAAGCTTTTCTTTCTGACGTTGTTGATAAAATC-AAGTTTGTCTCTTAAATA
842 TGGTGTCGCAAGAGAAGCTTTTCTTTCTAACGTTGTTGATAAAATCAAAGTTTGTCTCTTAAATA
* * * * *
177720 AGGCAAACTTGAATACTCATACTAATCCCCATTT-TTTTCAGGATT
907 AGACAAACATGAATAGTCATACTAATCCAC-TTTCTTTTCTGGATT
* * * * * * * * * *
177765 AGCCACCATAAATATAGTCTTCTGATACGGATACAGGATATTGATGATTTGCTTTTGCT-AGGAA
1 AGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCG-TAAGAAA
* * * * ** * *
177829 CACTTTTTTCCCA-CAATTTTTGTAGATTC-T-ATGTTC-GTGCCTTAAATAAGACAAACATGGA
65 CGCTTTCTTCCTACCAATTTTTG-AAAAGCATAAT-TTCAGT-CCTCAAATGAGACAAACATGGA
* * *
177890 CTCTAGTAAGGATCATCATTCATTTCGTGATTAGGCACTATAAACACATTCTTCTCC--TCAGGA
127 TTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTC-TCCCCAAT-AGGA
** * * *
177953 TGCATGATATTGATGGTTTTCTTTTG-CATGGAAATCTTTTCTTTGCCTCAGTTTCCTTAAAATC
190 TAAATGATATTGATGGTTTTCTTTTGCCA-GAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATC
* * *
178017 CAAGTTTGTACTTTAAATGTGATAAGCATTGATTCTCGTAAAAGTC-CCTATTCTTTCCAAGATT
254 AAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCC-ATTCTTTCCAAGATT
* * * *
178081 GGGAACCAAAAACACATTCTCTTCTTTAGGGTACATGACATTGATGCTTCGGTGTCGCAAGAGAA
318 GGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAA
** * * * *
178146 GCT-TTCTTTCTAACGTTGTTGATAAAATCAAAGTTTGTCTCTTAAATAAG-CTAAACTTGAATA
383 GCTGTTCTCCCCACCGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGAC-AAACATGAATA
* ** * ** * * *
178209 CTCATACTAATCCACATTCTTTTCAGGATTAACCAC-CGTAAACATAGTCTTTTCATAAGGGTAC
447 CTCATACTAATCCACTTTCTTTTTTGAATTAGGCACAC--AAACATAGTCTTCTCATAACGATAC
* * *
178273 ATGATATTGATGCTTCGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTGTAAATTCTAAGT
510 ATGATATCGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAATTTTTGTAAATTCTAAGT
* * * * * * *
178338 TCGTGGCCCAAATGAGACACACATGGATTCTAGTAGGGGTCTTCATTCATTTCATGATTAGGGAC
575 TCATGCCCCAAATGAGACAAACATAGATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCAC
* * * * *
178403 TATAAACACATTCTCCTCTTTTGGATAAATGATAGTGATGTTTTTCTTTTCCATGGAAATCTTTT
640 TATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTT
* * * * *
178468 CTTTGCCTTA-TTTCCTTAAAATCGATGTTTGTACTTTACATGAGACAAGCATTGATTCGCTTAA
705 CTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAA
* * * *
178532 AAGTCTCAATT-TTTCCAAGATTAGGAA-CAAAAACACATT-CCTCCATTAGGATACATTACATT
770 AAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATT
*
178594 GATGCTTTGGTGTTGCAAGAGAAGCTTTTCTTTCTAACGTTGTTGATAAAATC-AAGTTTGTCTC
835 GATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCTAACGTTGTTGATAAAATCAAAGTTTGTCTC
* * * * * * * *
178658 TTAATTAAGGCAAACCTGAATACTCAAACTAATCCCCATTCTTTTCAGGATT
900 TTAAATAAGACAAACATGAATAGTCATACTAATCCACTTTCTTTTCTGGATT
* * * * * * * * *
178710 AGCCACCATAAACATAGTCTTCTGATATGGATACAGGATATTGACGATTTGGTTTTGGT-AGGAA
1 AGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGG-TTTCGTAAGAAA
* * * ** * *
178774 CGCTTTTTTCCCA-CAATTTTTGTAGATTC-T-ATGTTC-GTCCCTCAAATAAGAGAAACATGGA
65 CGCTTTCTTCCTACCAATTTTTG-AAAAGCATAAT-TTCAGT-CCTCAAATGAGACAAACATGGA
*
178835 TTCTAGTAAGGATCATCATTCATTTCGTGATTAGGCACTATAAACACA-T-T---C---------
127 TTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCCCAATAGGATA
* * *
178886 -----T-TT--T-G----C--ATG---G-AAATCTTTTCTTTGCCTTAGTGTCCTTAAAATCAAA
192 AATGATATTGATGGTTTTCTTTTGCCAGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAA
* * * * *
178932 CTTTGTACTTTAAATGTGATAAGCATTGATTCTCGTAAAAGTTTCCTTTCTTTCCAAGATTGGGA
257 GTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGA
* * ** *
178997 AGCAAAAACACATTCTCTTCATTAGGATACATGACATTGATGCTTCAGTGTCGCAAGAGAAGCTT
322 ACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTG
* ** * * ** * * * *
179062 TTTTTTCTAACGTT-GCGAATAAAATCAAAGTTTGTCTGTTAAATAAGGCAAACTTGAATCCTCA
387 TTCTCCCCACCGTTATTG-ATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCA
* ** * * *
179126 TACTAATCCCCTTTC-TTTTCAAGATTAGCCACCATAAACATAGTCTTCT-A-ACACGGATACAG
451 TACTAATCCACTTTCTTTTTTGA-ATTAGGCA-CACAAACATAGTCTTCTCATA-AC-GATACAT
* * * * * * * * *
179188 GATATTGATGATTTGGTTTCGCTAGGAATGCTTTTTTCCCA-CATTTTTTGTAGATTCTATGTTC
512 GATATCGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAATTTTTGTAAATTCTAAGTTC
* * * * * * *
179252 GTGCCTCAAGTGAGACAAACATGGATTCTAGTAAAGATCTTCATTCATTTCGTGATTAGGCACTG
577 ATGCCCCAAATGAGACAAACATAGATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCACTA
* * * *
179317 CAAACACATTCTCCTCATTAGGATAAATGGTATTGATGGTTTTCATTTGCATGGAAATCTTCTCT
642 TAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCT
* * *
179382 TTTCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGATAAGCATTGATTCTCATAAAA
707 TTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAA
* * * *
179447 GTTTACATTCTTTCTAAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGA
772 GTCTCCATTCTTTCCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGA
* * * * * * ** * *
179512 TGCTTTTGCT-TTGCAGGAGAAGCTTTTCTTCCCACCGTTAATGATAAAATCAAAATTTGTCCCT
837 TGC-TTTGGTGTCGCAAGAGAAGCTTTTCTTTCTAACGTTGTTGATAAAATCAAAGTTTGTCTCT
* * * * *
179576 TAAAGAAGAGAAACATGAATACTCATACTAATTCC-CATTCTTTT-TAGGACT
901 TAAATAAGACAAACATGAATAGTCATACTAA-TCCACTTTCTTTTCT-GGATT
* * * * * * ** * *
179627 AGGCACCCTAAACATAGTCTTCTCTTACGGATACAAGATATTGATGATTTACTTTCGCAAGAAAT
1 AGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAAC
* * * ** * * *
179692 GTTTTTTTCCCACCAATTTTTGTAAATTC-TAAGTTC-GTGCCTCAAATGAGAAAAACATAGATT
66 GCTTTCTTCCTACCAATTTTTG-AAAAGCATAATTTCAGT-CCTCAAATGAGACAAACATGGATT
* * * * * *
179755 CTAGTAAGGATCTTCATTCACTTCGTGATTTGGCACTGTAAACACATTCTCCTCATTAGGAGAAA
129 CTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCCCAATAGGATAAA
* * * * * *
179820 AGATATTGATGGTTTTC-TTTG-CATGGAAATCTTTTCTTTACCTCATTTTTCGTAAAATCAAAG
194 TGATATTGATGGTTTTCTTTTGCCA-GAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAG
* *
179883 TTAGTACTTTAAATGAGACAAACATTGATTCTCGTAATAA-TCTCCATTCTTTCCAAGATTGGGA
258 TTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAA-AAGTCTCCATTCTTTCCAAGATTGGGA
* * * *
179947 ACCAAAAACACATTCTCTTCATTAGGATGCATGACATTGATGCTTTTGCT-TTGCAAGAGAAGCT
322 ACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGC-TTTGGTGTCGCAAGAGAAGCT
** * * * *
180011 -TGTCTTTCCACCGTTAATGATAAAATCAAAATTTGTCCCTTAAATAAGAGAAACATGAATACTC
386 GT-TCTCCCCACCGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTC
* * * * *
180075 ATACTAATTCC-CATTCTTTTTAGAATTAGGCACCCTAAACATAGTCTTCTC-TTACAGATACAA
450 ATACTAA-TCCACTTTCTTTTTTGAATTAGGCACAC-AAACATAGTCTTCTCATAAC-GATACAT
* * * * *
180138 GATATTGATGATTTAGTTTCGCAAGAAACGTTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTC
512 GATATCGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAATTTTTGTAAATTCTAAGTTC
* * * * * *
180203 GTGCCTCAAATAAGACAAACATAGATTCTAATAAGGATCTTTATTCATTTCGTGATTAGGCACTA
577 ATGCCCCAAATGAGACAAACATAGATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCACTA
180268 TAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCT
642 TAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCT
* * * * * **
180333 TTACCTTATTTTTCGTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTTATTCTTATAAAA
707 TTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAA
* * * *
180398 GTCTCCATTCTTTCTAACATTGGGAACCAAGAACACATTCCCTTTATTAGGATACATGACATTGA
772 GTCTCCATTCTTTCCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGA
* *
180463 ----------T------AGAA-----------T--C------G---------AAGTTTATCTATT
837 TGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCTAACGTTGTTGATAAAATCAAAGTTTGTCTCTT
* * * * * * *
180484 ACATAAGACAAACATGAATACTCATACTAATTCTCATTCTTTACTAGATT
902 AAATAAGACAAACATGAATAGTCATACTAATCCACTTTCTTTTCTGGATT
* * * * * * *
180534 AGGCACCATAAACAAATTCCTCTAATAAGGATACATGATATTGATGCTTTGGTTTCGCAAAAAAC
1 AGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAAC
* * * ** * * *
180599 ACTTTCTTCCCACCAATTTTTGTTAATTCA-AATTTC-GTGCC-CTAAATGAGATAAGCAAGGAT
66 GCTTTCTTCCTACCAATTTTTG-AAAAGCATAATTTCAGT-CCTC-AAATGAGACAAACATGGAT
* * *
180661 TCTAGTAAGGATCTTCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
128 TCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCCCAATAGGATAA
* * ** *
180726 ACGATATTGATGGCTTTTTTTTTTGCGTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAA
193 ATGATATTGATGG--TTTTCTTTTGCCAGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAA
* * * ** *
180791 AGTTTATACTTTAAATGAGACATGCGTTGATTCTCACAAAAGTCTCCATTCTTTTCAAGATTGGG
256 AGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGG
* * *
180856 AACCAAAATCACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAATAGAAGCT
321 AACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCT
* * * * * **
180921 TTTCAT-TCCACCGTTGTTGATAGAATCAAAG-TTGTCTCTTAAGTAAGACAAATGTGAATACTC
386 GTTC-TCCCCACCGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTC
* * * * * * *
180984 ATACTAATCCCCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCTTATAAGGATACATGA
450 ATACTAATCCACTTTCTTTTTTGAATTAGGCA-CACAAACATAGTCTTCTCATAACGATACATGA
* * * * * * * * * *
181049 TCTTGATGCTTTGGTTTCGTAGGATAA-GCTTTTTTCTCACCAATTTTTGTAAAGTATGAGTTTA
514 TATCGATGCTTTGGTTTCGCAAGA-AACGCTTTCTTCCCACCAATTTTTGTAAATTCTAAGTTCA
* * ** *
181113 CTG-CTCAAATGAGACAAACA-AGGATTCTTGTTGGGATCTTCATTCATTTCGTGATTAGGCACT
578 -TGCCCCAAATGAGACAAACATA-GATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCACT
* * * *
181176 ATAAACACATTCTTCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATGAAAATCTTTTC
641 ATAAACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTC
* *
181241 TTTGTCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAA
706 TTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAA
* * *
181306 AGTCTCCATTCTTTTCAACATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATTACATTG
771 AGTCTCCATTCTTTCCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTG
* * * * * * *
181371 ATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTCCCAACATTATCGATAAAATCAAAATTTGTCTCT
836 ATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCTAACGTTGTTGATAAAATCAAAGTTTGTCTCT
** * *
181436 TAAATAAGACAAAGTTGAATACTCATACTAATCC-CATTCTTTT-TAGGATT
901 TAAATAAGACAAACATGAATAGTCATACTAATCCACTTTCTTTTCT-GGATT
* * * * * * ** **
181486 AGGCACCATTAACATAGTCTTCTTATATGGATATAGGATATTGATGAATTGGTTTCCCAAGAAAC
1 AGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAAC
* * * * **
181551 GGTTT-TTCCCA-TAATTTTTGTAGATTC-TAAGTTT--GTGCCTCAAATGAGACAAACATGGAT
66 GCTTTCTTCCTACCAATTTTTG-AAAAGCATAA-TTTCAGT-CCTCAAATGAGACAAACATGGAT
* * * *
181611 TCTAGTAAGGATCTGCATTCATTTCGTGATTAGGCACTATAAACACATACTCCTCATTAGGATAA
128 TCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCCCAATAGGATAA
* * * **
181676 ATGATATTGATGGTTCTCTTTTG-CATTAAAATCTTTTCTTTGACTCGTTTTCCTTAAAATCAAA
193 ATGATATTGATGGTTTTCTTTTGCCA-GAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAA
* * * *
181740 GTTTGTACTTTAAATGAGACATGCATTGATTCCCGTAAAAGTCTCCACTCTTTTCAAGATTGGGA
257 GTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGA
** * *
181805 ACCAAAAATGCATTCCCTTCATTAGGATACATGACATTGATGCCTTAGTGTCGCAAGAGAAGCTG
322 ACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTG
* * * *
181870 TTCTTCCCACCATTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCAT
387 TTCTCCCCACCGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCAT
* * * * * *
181935 ACTAATCCACTTT-TTTTTCTGGATTAGGCACCATAAACATTGTCTTCTTATAAGGACACATGAT
452 ACTAATCCACTTTCTTTTT-TGAATTAGGCA-CACAAACATAGTCTTCTCATAACGATACATGAT
* * * ** * *
181999 ATCGATGCTTTGGTTTCGTAAGAAACGCTTTCTTCCCACCAATTTTTGAAAAGTAAAAGCTCATT
515 ATCGATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAATTTTTGTAAATTCTAAGTTCATG
** * * *
182064 CTTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGGTTAGGCACTATAA
580 CCCCAAATGAGACAAACATAGATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCACTATAA
* * * * *
182129 ACACATTCTCCCCAATAGGATAAATGATATTGATGGTTTTCTTCTGCTTGGAAATGTTTTCTTTG
645 ACACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTG
* *
182194 CCTTATTTTCCTTAAAATCAAAGCTTGTACTTTAAATGAGACAAGCATTAATTCTCGTAAAAGTC
710 CCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTC
* * * *
182259 TCCATTCTTTCCATGATTAGGAACCAAAAACGCAATT-CCTTCATTAGAATACATGACATTGATG
775 TCCATTCTTTCCAAGATTGGGAACCAAAAACAC-ATTCCCTTCATTAGGATACATGACATTGATG
* ** *
182323 CTTTGGTGTCGCAATAGAAGCTTTTCTTTCTAACCATGTTGATAAAATCAAAGTTTGTCTCTTAT
839 CTTTGGTGTCGCAAGAGAAGCTTTTCTTTCTAACGTTGTTGATAAAATCAAAGTTTGTCTCTTAA
* * * * *
182388 ATAAGACAAACTTGAGTAGTCACACTAATCCA-TTTTTTTTCTAGATT
904 ATAAGACAAACATGAATAGTCATACTAATCCACTTTCTTTTCTGGATT
* * * * *
182435 AGGCGCCATAAACATAGTCTTCGCATAAGGATACATGATATCGATGTTTTGGTTTTGTAAGAAAT
1 AGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAAC
* * * * * *
182500 GCTTTCTTCCCACAAATTTTTGAAAAGCATAAGTTCATTCCTCAAATTAGACAAACAAGGATTCT
66 GCTTTCTTCCTACCAATTTTTGAAAAGCATAATTTCAGTCCTCAAATGAGACAAACATGGATTCT
* * *
182565 AGTAAGGATTTTCATTCATTTCGTGGTTAGGCACTATAAACACATTCTCCCCAATAGGATCAATG
131 AGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCCCAATAGGATAAATG
* * * * *
182630 ATATTGATGGTTTT-TTTATGCCTGGAAATTTTTTCTTTGTCTTATGTTCCTTAAAATCAAAGTT
196 ATATTGATGGTTTTCTTT-TGCCAGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTT
* * * * * *
182694 TGTACATTAAATAAGACATA-TATTGATTCTCGTAAAAGTCTCCATTCTTTTCAACATTGGGAGC
260 TGTACTTTAAATGAGACA-AGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAAC
* * * *
182758 CAAAAACACATTGCCTTCGTTTGGATACATGACATTGGTGCTTTGGTGTCGCAAGAGAAGCTGTT
324 CAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTGTT
* * * *
182823 CTCCCTACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAAGAATAGTCATAC
389 CTCCCCACCGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATAC
* * * * * * *
182888 TAATCCATTTTCTTTTTTGGATTAGGCACCATAAACATTGCCTTTTCATAAGGATACATGATATC
454 TAATCCACTTTCTTTTTTGAATTAGGCA-CACAAACATAGTCTTCTCATAACGATACATGATATC
* * * *
182953 GATGCTTTGGTTTCGTAAGAAACGCTTTCTTCCCACCAATTTTTG-AAACGTATAAGTTCATTCC
518 GATGCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAATTTTTGTAAA-TTCTAAGTTCATGCC
* * * * * * * *
183017 CCAAATAAGACAAACGTGGATTCTAGAAAGGATCTTCATTTATTTCGTGCTTCGGCACTATAAAC
582 CCAAATGAGACAAACATAGATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCACTATAAAC
* * ** * **
183082 ACATTCTCCCCAATAATATAAATGATATTGATGGTTTTCTTTTGCCTAAAAATCTTTTCTTTGCC
647 ACATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCC
* * * *
183147 TTATTTTCCTTAAAATCAACGATTGCACTTTAAATGAGACAAGCATAGATTCTCGTAAAAGTCTC
712 TTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTC
* *
183212 CACTCTTTCCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGAATACATGACATTGATG
777 CATTCTTTCCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATG
183274 AATAGTCATA
Statistics
Matches: 9873, Mismatches: 1117, Indels: 443
0.86 0.10 0.04
Matches are distributed among these distances:
906 3 0.00
907 221 0.02
908 5 0.00
909 368 0.04
910 173 0.02
911 3 0.00
912 296 0.03
913 186 0.02
914 17 0.00
915 12 0.00
916 68 0.01
917 111 0.01
918 88 0.01
919 3 0.00
920 1 0.00
922 2 0.00
923 2 0.00
925 5 0.00
926 1 0.00
935 4 0.00
937 1 0.00
938 3 0.00
939 1 0.00
940 1 0.00
941 2 0.00
942 1 0.00
944 4 0.00
945 286 0.03
946 18 0.00
947 29 0.00
948 1222 0.12
949 1460 0.15
950 1238 0.13
951 1366 0.14
952 2622 0.27
953 50 0.01
ACGTcount: A:0.31, C:0.19, G:0.15, T:0.36
Consensus pattern (951 bp):
AGGCACCATAAACATAGTCTTCTCATAAGGATACATGATATCGATGCTTTGGTTTCGTAAGAAAC
GCTTTCTTCCTACCAATTTTTGAAAAGCATAATTTCAGTCCTCAAATGAGACAAACATGGATTCT
AGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCCCAATAGGATAAATG
ATATTGATGGTTTTCTTTTGCCAGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTT
GTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCA
AAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTGTTCT
CCCCACCGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTA
ATCCACTTTCTTTTTTGAATTAGGCACACAAACATAGTCTTCTCATAACGATACATGATATCGAT
GCTTTGGTTTCGCAAGAAACGCTTTCTTCCCACCAATTTTTGTAAATTCTAAGTTCATGCCCCAA
ATGAGACAAACATAGATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCACTATAAACACAT
TCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTAT
TTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATT
CTTTCCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGT
GTCGCAAGAGAAGCTTTTCTTTCTAACGTTGTTGATAAAATCAAAGTTTGTCTCTTAAATAAGAC
AAACATGAATAGTCATACTAATCCACTTTCTTTTCTGGATT
Found at i:179884 original size:158 final size:154
Alignment explanation
Indices: 179222--180378 Score: 627
Period size: 159 Copynumber: 7.3 Consensus size: 154
179212 GGAATGCTTT
* * * * * *
179222 TTTCCCA-CATTTTTTGTAGATTCTATGTTCGTGCCTCAAGTGAGACAAACATGGATTCTAGTAA
1 TTTCCCACCA-TTTTTGTAAAATCAAAGTTCGTGCCTTAAATGAGACAAACAT-GATTCTAGT-A
*** *
179286 AGATCTTCATTCATTTCGTGATTAGGCACTGCAAACACATTCTCCTCATTAGGATAAATGGTATT
63 AGATCTTCATTC-TTTCGTGATTAGGCACCATAAACACATTCTCCTCATTAGGATAAATGATATT
*
179351 GATGGTTTTCATTTGCATGGAAATCTTCTC
127 GATGGTTTTC-TTTGCA-GGAAATCTTTTC
* ** * * * * *
179381 TTTTCC-TTATTTTCCT-TAAAATCAAAGTTTGTACTTTAAATGAGATAAGCATTGATTCTCA-T
1 TTTCCCACCATTTT--TGTAAAATCAAAGTTCGTGCCTTAAATGAGACAAACA-TGATTCT-AGT
* * * *
179443 AAAAGT-TTACATTCTTTC-TAAGATTAGGAACCAAAAACACATTC-CCTTCATTAGGATACATG
62 AAGA-TCTT-CATTCTTTCGT--GATTAGGCACCATAAACACATTCTCC-TCATTAGGATAAATG
* * *
179505 ACATTGATGCTTTTGCTTTGCAGGAGAAGCTTTTC
122 ATATTGATGGTTTT-CTTTGCAGGA-AATCTTTTC
* ** * * * *
179540 -TTCCCACCGTTAATGATAAAATCAAAATTTGTCCCTTAAA-GAAGAGAAACATGAATACTCATA
1 TTTCCCACCATTTTTG-TAAAATCAAAGTTCGTGCCTTAAATG-AGACAAACATG-AT--TC-TA
* * * * * * * * *
179603 CTAA-TTC-CCATTCTTT-TTAGGACTAGGCACCCTAAACATAGTCTTCTC-TTACGGATACAA-
60 GTAAGATCTTCATTCTTTCGT--GATTAGGCACCATAAACACATTCTCCTCATTA-GGATA-AAT
* * * *
179663 GATATTGATGATTTACTTTCGCAAGAAATGTTTT-
121 GATATTGATGGTTTTCTTT-GCAGGAAATCTTTTC
* * * *
179697 TTTCCCACCAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATGAGAAAAACATAGATTCTAGTAA
1 TTTCCCACC-ATTTTTGTAAAATCAAAGTTCGTGCCTTAAATGAGACAAACAT-GATTCTAGTAA
* * ** * *
179762 GGATCTTCATTCACTTCGTGATTTGGCACTGTAAACACATTCTCCTCATTAGGAGAAAAGATATT
64 -GATCTTCATTC-TTTCGTGATTAGGCACCATAAACACATTCTCCTCATTAGGATAAATGATATT
179827 GATGGTTTTCTTTGCATGGAAATCTTTTC
127 GATGGTTTTCTTTGCA-GGAAATCTTTTC
* * * * * *
179856 TTTACC-TCATTTTTCGTAAAATCAAAGTTAGTACTTTAAATGAGACAAACATTGATTCTCGTAA
1 TTTCCCACCATTTTT-GTAAAATCAAAGTTCGTGCCTTAAATGAGACAAACA-TGATTCTAGTAA
* * ** * * * * ** *
179920 TAATCTCCATTCTTTCCAAGATTGGGAACCAAAAACACATTCTCTTCATTAGGATGCATGACATT
64 -GATCTTCATTCTTT-CGTGATTAGGCACCATAAACACATTCTCCTCATTAGGATAAATGATATT
* * * *
179985 GATGCTTTTGCTTTGCAAGAGAAGCTTGTC
127 GATGGTTTT-CTTTGCAGGA-AATCTTTTC
* ** * * * * * *
180015 TTT-CCACCGTTAATGATAAAATCAAAATTTGTCCCTTAAATAAGAGAAACATGAATACTCATAC
1 TTTCCCACCATTTTTG-TAAAATCAAAGTTCGTGCCTTAAATGAGACAAACATG-AT--TC-TAG
* * * * * * * *
180079 TAA-TTC-CCATTCTTT-TTAGAATTAGGCACCCTAAACATAGTCTTCTC-TTACAGATACAA-G
61 TAAGATCTTCATTCTTTCGT-G-ATTAGGCACCATAAACACATTCTCCTCATTA-GGATA-AATG
* ** *
180139 ATATTGATGATTTAGTTTCGCAAGAAA-CGTTTT-
122 ATATTGATGGTTTTCTTT-GCAGGAAATC-TTTTC
* * * * *
180172 TTTCCCACCAATTTTTGTAAATTCTAAGTTCGTGCCTCAAATAAGACAAACATAGATTCTAATAA
1 TTTCCCACC-ATTTTTGTAAAATCAAAGTTCGTGCCTTAAATGAGACAAACAT-GATTCTAGTAA
* *
180237 GGATCTTTATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATT
64 -GATCTTCATTC-TTTCGTGATTAGGCACCATAAACACATTCTCCTCATTAGGATAAATGATATT
180302 GATGGTTTTCTTTTGCATGGAAATCTTTTC
127 GATGGTTTTC-TTTGCA-GGAAATCTTTTC
* ** * * *
180332 TTTACC-TTATTTTTCGTAAAATCAAAGTTTGTACTTTAAATGAGACA
1 TTTCCCACCATTTTT-GTAAAATCAAAGTTCGTGCCTTAAATGAGACA
180379 TGCATTTATT
Statistics
Matches: 750, Mismatches: 176, Indels: 144
0.70 0.16 0.13
Matches are distributed among these distances:
155 10 0.01
156 4 0.01
157 25 0.03
158 331 0.44
159 349 0.47
160 18 0.02
161 5 0.01
162 8 0.01
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (154 bp):
TTTCCCACCATTTTTGTAAAATCAAAGTTCGTGCCTTAAATGAGACAAACATGATTCTAGTAAGA
TCTTCATTCTTTCGTGATTAGGCACCATAAACACATTCTCCTCATTAGGATAAATGATATTGATG
GTTTTCTTTGCAGGAAATCTTTTC
Found at i:181474 original size:475 final size:475
Alignment explanation
Indices: 180458--183273 Score: 3568
Period size: 476 Copynumber: 5.9 Consensus size: 475
180448 GATACATGAC
* * * *
180458 ATTGATAGAATCGAAGTTTATCTATTACATAAGACAAACATGAATACTCATACTAATTCTCA-TT
1 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAA-TC-CATTT
* * * * * *
180522 CTTTACTA-GATTAGGCACCATAAACAAATTCCTCTAATAAGGATACATGATATTGATGCTTTGG
64 CTTT-TTAGGATTAGGCACCATAAACATAGTCTTCTTATAAGGATACATGATATCGATGCTTTGG
* * * * * * * *
180586 TTTCGCAAAAAACACTTTCTTCCCACCAATTTTTGTTAATTCA-AATTTC-GTGCCCTAAATGAG
128 TTTCGTAAGAAACGCTTTCTTCCCACCAATTTTTGTAAAGT-ATAAGTTCACTGCTC-AAATGAG
* * *
180649 ATAAGCAAGGATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCACTATAAACACATTCTCC
191 ACAAACAAGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCC
* * * * * *
180714 TCATTAGGATAAACGATATTGATGGCTTTTTTTTTTGCGTGGAAATCTTTTCTTTGCCTTATTTT
256 CCAATAGGATAAATGATATTGATGG--TTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTT
* * **
180779 CCTTAAAATCAAAGTTTATACTTTAAATGAGACATGCGTTGATTCTCACAAAAGTCTCCATTCTT
319 CCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTT
* *
180844 TTCAAGATTGGGAACCAAAATCACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTC
384 TTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTC
* *
180909 GCAATAGAAGCTTTTCATT-CCACCGTT
449 GCAAGAGAAGCTTTTC-TTCCCACCATT
* * **
180936 GTTGATAGAATCAAAG-TTGTCTCTTAAGTAAGACAAATGTGAATACTCATACTAATCCCCA-TT
1 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAAT--CCATTT
* *
180999 CTTTTTAGGATTAGGCACCATAAACATAGTCTTCTTATAAGGATACATGATCTTGATGCTTTGGT
64 CTTTTTAGGATTAGGCACCATAAACATAGTCTTCTTATAAGGATACATGATATCGATGCTTTGGT
* * * * *
181064 TTCGTAGGATAA-GCTTTTTTCTCACCAATTTTTGTAAAGTATGAGTTTACTGCTCAAATGAGAC
129 TTCGTAAGA-AACGCTTTCTTCCCACCAATTTTTGTAAAGTATAAGTTCACTGCTCAAATGAGAC
* ** * *
181128 AAACAAGGATTCTTGTTGGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTTCTC
193 AAACAAGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCCC
** * *
181193 TTTAGGATAAATGATATTTATGGTTTTCTTTTGCATGAAAATCTTTTCTTTGTCTTATTTTCCTT
258 AATAGGATAAATGATATTGATGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTT
181258 AAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCA
323 AAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCA
* *
181323 ACATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATTACATTGATGCTTTGGTGTCGCAA
388 AGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAA
* *
181388 GAGAGGCTTTTCTTCCCAACATT
453 GAGAAGCTTTTCTTCCCACCATT
* * * **
181411 ATCGATAAAATCAAAATTTGTCTCTTAAATAAGACAAAGTTGAATACTCATACTAATCCCA-TTC
1 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAAT-CCATTTC
* * * * * **
181475 TTTTTAGGATTAGGCACCATTAACATAGTCTTCTTATATGGATATAGGATATTGATGAATTGGTT
65 TTTTTAGGATTAGGCACCATAAACATAGTCTTCTTATAAGGATACATGATATCGATGCTTTGGTT
** * * * * * **
181540 TCCCAAGAAACGGTTT-TTCCCA-TAATTTTTGTAGATTCTAAGTT-TGTGCCTCAAATGAGACA
130 TCGTAAGAAACGCTTTCTTCCCACCAATTTTTGTAAAGTATAAGTTCACTG-CTCAAATGAGACA
* * * *
181602 AACATGGATTCTAGTAAGGATCTGCATTCATTTCGTGATTAGGCACTATAAACACATACTCCTCA
194 AACAAGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCCCA
* * * * **
181667 TTAGGATAAATGATATTGATGGTTCTCTTTTGCATTAAAATCTTTTCTTTGACTCGTTTTCCTTA
259 ATAGGATAAATGATATTGATGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTA
* *
181732 AAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCCCGTAAAAGTCTCCACTCTTTTCAA
324 AAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAA
** * *
181797 GATTGGGAACCAAAAATGCATTCCCTTCATTAGGATACATGACATTGATGCCTTAGTGTCGCAAG
389 GATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAG
*
181862 AGAAGCTGTTCTTCCCACCATT
454 AGAAGCTTTTCTTCCCACCATT
*
181884 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCACTTT-
1 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCA-TTTC
* * *
181948 TTTTTCTGGATTAGGCACCATAAACATTGTCTTCTTATAAGGACACATGATATCGATGCTTTGGT
65 TTTTT-AGGATTAGGCACCATAAACATAGTCTTCTTATAAGGATACATGATATCGATGCTTTGGT
* * * *
182013 TTCGTAAGAAACGCTTTCTTCCCACCAATTTTTGAAAAGTAAAAGCTCA-TTCTTCAAATGAGAC
129 TTCGTAAGAAACGCTTTCTTCCCACCAATTTTTGTAAAGTATAAGTTCACTGC-TCAAATGAGAC
* *
182077 AAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGGTTAGGCACTATAAACACATTCTCCCC
193 AAACAAGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCCC
* * * *
182142 AATAGGATAAATGATATTGATGGTTTTCTTCTGCTTGGAAATGTTTTCTTTGCCTTATTTTCCTT
258 AATAGGATAAATGATATTGATGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTT
* * * *
182207 AAAATCAAAGCTTGTACTTTAAATGAGACAAGCATTAATTCTCGTAAAAGTCTCCATTCTTTCCA
323 AAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCA
* * * *
182272 TGATTAGGAACCAAAAACGCAATT-CCTTCATTAGAATACATGACATTGATGCTTTGGTGTCGCA
388 AGATTGGGAACCAAAAACAC-ATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCA
* **
182336 ATAGAAGCTTTTCTTTCTAACCA-T
452 AGAGAAGCTTTTC-TTCCCACCATT
* * * * * * * *
182360 GTTGATAAAATCAAAGTTTGTCTCTTATATAAGACAAACTTGAGTAGTCACACTAATCCATTTTT
1 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCATTTCT
* ** *
182425 TTTCTA-GATTAGGCGCCATAAACATAGTCTTCGCATAAGGATACATGATATCGATGTTTTGGTT
66 TTT-TAGGATTAGGCACCATAAACATAGTCTTCTTATAAGGATACATGATATCGATGCTTTGGTT
* * * * * * * *
182489 TTGTAAGAAATGCTTTCTTCCCACAAATTTTTGAAAAGCATAAGTTCATTCCTCAAATTAGACAA
130 TCGTAAGAAACGCTTTCTTCCCACCAATTTTTGTAAAGTATAAGTTCACTGCTCAAATGAGACAA
* *
182554 ACAAGGATTCTAGTAAGGATTTTCATTCATTTCGTGGTTAGGCACTATAAACACATTCTCCCCAA
195 ACAAGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCCCAA
* * * * * *
182619 TAGGATCAATGATATTGATGGTTTT-TTTATGCCTGGAAATTTTTTCTTTGTCTTATGTTCCTTA
260 TAGGATAAATGATATTGATGGTTTTCTTT-TGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTA
* * **
182683 AAATCAAAGTTTGTACATTAAATAAGACATATATTGATTCTCGTAAAAGTCTCCATTCTTTTCAA
324 AAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAA
* * * * * *
182748 CATTGGGAGCCAAAAACACATTGCCTTCGTTTGGATACATGACATTGGTGCTTTGGTGTCGCAAG
389 GATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAG
* *
182813 AGAAGCTGTTC-TCCCTACCGTT
454 AGAAGCTTTTCTTCCC-ACCATT
* *
182835 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAAGAATAGTCATACTAATCCATTTTC
1 ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCA-TTTC
* * *
182900 TTTTTTGGATTAGGCACCATAAACATTGCCTT-TTCATAAGGATACATGATATCGATGCTTTGGT
65 TTTTTAGGATTAGGCACCATAAACATAGTCTTCTT-ATAAGGATACATGATATCGATGCTTTGGT
* * * *
182964 TTCGTAAGAAACGCTTTCTTCCCACCAATTTTTG-AAACGTATAAGTTCATTCCCCAAATAAGAC
129 TTCGTAAGAAACGCTTTCTTCCCACCAATTTTTGTAAA-GTATAAGTTCACTGCTCAAATGAGAC
** * * * *
183028 AAACGTGGATTCTAGAAAGGATCTTCATTTATTTCGTGCTTCGGCACTATAAACACATTCTCCCC
193 AAACAAGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCCC
** * *
183093 AATAATATAAATGATATTGATGGTTTTCTTTTGCCTAAAAATCTTTTCTTTGCCTTATTTTCCTT
258 AATAGGATAAATGATATTGATGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTT
* * * * * * *
183158 AAAATCAACGATTGCACTTTAAATGAGACAAGCATAGATTCTCGTAAAAGTCTCCACTCTTTCCA
323 AAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCA
*
183223 AGATTGGGAACCAAAAACACATTCCCTTCATTAGAATACATGACATTGATG
388 AGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATG
183274 AATAGTCATA
Statistics
Matches: 2040, Mismatches: 267, Indels: 64
0.86 0.11 0.03
Matches are distributed among these distances:
472 5 0.00
473 345 0.17
474 82 0.04
475 672 0.33
476 689 0.34
477 226 0.11
478 21 0.01
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.36
Consensus pattern (475 bp):
ATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCATTTCT
TTTTAGGATTAGGCACCATAAACATAGTCTTCTTATAAGGATACATGATATCGATGCTTTGGTTT
CGTAAGAAACGCTTTCTTCCCACCAATTTTTGTAAAGTATAAGTTCACTGCTCAAATGAGACAAA
CAAGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCCCAAT
AGGATAAATGATATTGATGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAA
ATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGA
TTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAG
AAGCTTTTCTTCCCACCATT
Found at i:182966 original size:951 final size:946
Alignment explanation
Indices: 180459--183273 Score: 3804
Period size: 951 Copynumber: 3.0 Consensus size: 946
180449 ATACATGACA
* * * * * *
180459 TTGATAGAATCGAAGTTTATCTATTACATAAGACAAACATGAATACTCATACTAATTCTCATTCT
1 TTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACTTGAATACTCATACTAA-TC-CATTCT
* * * * *
180524 TTACTAGATTAGGCACCATAAACAAATTCCTCTAATAAGGATACATGATATTGATGCTTTGGTTT
64 TTTCTAGATTAGGCACCATAAACATAGTCTTCTAATAAGGATACATGATATTGATGATTTGGTTT
* * * * * *
180589 CGCAAAAAACACTTTCTTCCCACCAATTTTTGTTAATTCA-AATTTCGTGCC-CTAAATGAGATA
129 CGCAAGAAACGCTTTCTTCCCACAAATTTTTGTAAATTCATAAGTTCGTGCCTC-AAATGAGACA
* *
180652 AGCAAGGATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCA
193 AACAAGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCA
* * *
180717 TTAGGATAAACGATATTGATGGCTTTTTTTTTTGCGTGGAAATCTTTTCTTTGCCTTATTTTCCT
258 TTAGGATAAATGATATTGATGG---TTTTTTTTGCATGGAAATCTTTTCTTTGACTTATTTTCCT
* * **
180782 TAAAATCAAAGTTTATACTTTAAATGAGACATGCGTTGATTCTCACAAAAGTCTCCATTCTTTTC
320 TAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTC
*
180847 AAGATTGGGAACCAAAATCACATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCA
385 AAGATTGGGAACCAAAAACACATTCC-TTCATTAGGATACATGACATTGATGCTTTGGTGTCGCA
* * * * * **
180912 ATAGAAGCTTTTCATTCCACCGTTGTTGATAGAATCAAAG-TTGTCTCTTAAGTAAGACAAATGT
449 AGAGAAGCTGTTCATCCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAT
* *** * *
180976 GAATACTCATACTAATCCCCATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCTTATAAGG
514 GAATAGTCATACTAATCCATTTTCTTTTTTGGATTAGGCACCATAAACATTGTCTTCTTATAAGG
* * * * * *
181041 ATACATGATCTTGATGCTTTGGTTTCGTAGGATAA-GCTTTTTTCTCACCAATTTTTGTAAAGTA
579 ATACATGATATCGATGCTTTGGTTTCGTAAGA-AACGCTTTCTTCCCACCAATTTTTGAAAAGTA
* * * * * **
181105 TGAGTTTACTGCTCAAATGAGACAAACAAGGATTCTTGTTGGGATCTTCATTCATTTCGTGATTA
643 TAAGTTCA-TTCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTA
* * ** *
181170 GGCACTATAAACACATTCTTCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATGAAAAT
707 GGCACTATAAACACATTCTCCCCAATAGGATAAATGATATTGATGGTTTTCTTTTGCATGAAAAT
* * * *
181235 CTTTTCTTTGTCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCT
772 CTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGATTGTACTTTAAATGAGACAAGCATTAATTCT
* * * *
181300 CGTAAAAGTCTCCATTCTTTTCAACATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATT
837 CGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGAATACATG
*
181365 ACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTCCCAACAT
902 ACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTCCCAACAT
* *
181410 TATCGATAAAATCAAAATTTGTCTCTTAAATAAGACAAAGTTGAATACTCATACTAATCCCATTC
1 T-T-GATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACTTGAATACTCATACTAAT-CCATTC
* * * * * *
181475 TTTT-TAGGATTAGGCACCATTAACATAGTCTTCTTATATGGATATAGGATATTGATGAATTGGT
63 TTTTCTA-GATTAGGCACCATAAACATAGTCTTCTAATAAGGATACATGATATTGATGATTTGGT
* * * * *
181539 TTCCCAAGAAACGGTTT-TTCCCA-TAATTTTTGTAGATTC-TAAGTTTGTGCCTCAAATGAGAC
127 TTCGCAAGAAACGCTTTCTTCCCACAAATTTTTGTAAATTCATAAGTTCGTGCCTCAAATGAGAC
* * *
181601 AAACATGGATTCTAGTAAGGATCTGCATTCATTTCGTGATTAGGCACTATAAACACATACTCCTC
192 AAACAAGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTC
* ** **
181666 ATTAGGATAAATGATATTGATGGTTCTCTTTTGCATTAAAATCTTTTCTTTGACTCGTTTTCCTT
257 ATTAGGATAAATGATATTGATGGTT-TTTTTTGCATGGAAATCTTTTCTTTGACTTATTTTCCTT
* *
181731 AAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCCCGTAAAAGTCTCCACTCTTTTCA
321 AAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCA
** * *
181796 AGATTGGGAACCAAAAATGCATTCCCTTCATTAGGATACATGACATTGATGCCTTAGTGTCGCAA
386 AGATTGGGAACCAAAAACACATT-CCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAA
* *
181861 GAGAAGCTGTTCTTCCCACCATTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATG
450 GAGAAGCTGTTCATCCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATG
*
181926 AATAGTCATACTAATCCACTTTT-TTTTCTGGATTAGGCACCATAAACATTGTCTTCTTATAAGG
515 AATAGTCATACTAATCCA-TTTTCTTTTTTGGATTAGGCACCATAAACATTGTCTTCTTATAAGG
* *
181990 ACACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTTCTTCCCACCAATTTTTGAAAAGTAA
579 ATACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTTCTTCCCACCAATTTTTGAAAAGTAT
* *
182055 AAGCTCATTCTTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGGTTAG
644 AAGTTCATTC-TCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAG
* * * *
182120 GCACTATAAACACATTCTCCCCAATAGGATAAATGATATTGATGGTTTTCTTCTGCTTGGAAATG
708 GCACTATAAACACATTCTCCCCAATAGGATAAATGATATTGATGGTTTTCTTTTGCATGAAAATC
*
182185 TTTTCTTTGCCTTATTTTCCTTAAAATCAAAGCTTGTACTTTAAATGAGACAAGCATTAATTCTC
773 TTTTCTTTGCCTTATTTTCCTTAAAATCAAAGATTGTACTTTAAATGAGACAAGCATTAATTCTC
* * *
182250 GTAAAAGTCTCCATTCTTTCCATGATTAGGAACCAAAAACGCAATT-CCTTCATTAGAATACATG
838 GTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAACAC-ATTCCCTTCATTAGAATACATG
* * *
182314 ACATTGATGCTTTGGTGTCGCAATAGAAGCTTTTCTTTCTAACCAT
902 ACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTCCCAA-CAT
* * * * *
182360 GTTGATAAAATCAAAGTTTGTCTCTTATATAAGACAAACTTGAGTAGTCACACTAATCCATTTTT
1 -TTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACTTGAATACTCATACTAATCCA-TTCT
* ** * *
182425 TTTCTAGATTAGGCGCCATAAACATAGTCTTCGCATAAGGATACATGATATCGATGTTTTGGTTT
64 TTTCTAGATTAGGCACCATAAACATAGTCTTCTAATAAGGATACATGATATTGATGATTTGGTTT
* * * ** * * *
182490 TGTAAGAAATGCTTTCTTCCCACAAATTTTTG-AAAAGCATAAGTTCATTCCTCAAATTAGACAA
129 CGCAAGAAACGCTTTCTTCCCACAAATTTTTGTAAATTCATAAGTTCGTGCCTCAAATGAGACAA
* * * *
182554 ACAAGGATTCTAGTAAGGATTTTCATTCATTTCGTGGTTAGGCACTATAAACACATTCTCCCCAA
194 ACAAGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCAT
* * * * *
182619 TAGGATCAATGATATTGATGGTTTTTTTATGCCTGGAAATTTTTTCTTTGTCTTATGTTCCTTAA
259 TAGGATAAATGATATTGATGGTTTTTTT-TGCATGGAAATCTTTTCTTTGACTTATTTTCCTTAA
* * ** *
182684 AATCAAAGTTTGTACATTAAATAAGACATATATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAC
323 AATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAG
* * * *
182749 ATTGGGAGCCAAAAACACATTGCCTTCGTTTGGATACATGACATTGGTGCTTTGGTGTCGCAAGA
388 ATTGGGAACCAAAAACACATT-CCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGA
*
182814 GAAGCTGTTC-TCCCTACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAAGA
452 GAAGCTGTTCATCCC-ACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGA
*
182878 ATAGTCATACTAATCCATTTTCTTTTTTGGATTAGGCACCATAAACATTGCCTT-TTCATAAGGA
516 ATAGTCATACTAATCCATTTTCTTTTTTGGATTAGGCACCATAAACATTGTCTTCTT-ATAAGGA
*
182942 TACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTTCTTCCCACCAATTTTTGAAACGTATA
580 TACATGATATCGATGCTTTGGTTTCGTAAGAAACGCTTTCTTCCCACCAATTTTTGAAAAGTATA
* * * * * * *
183007 AGTTCATTCCCCAAATAAGACAAACGTGGATTCTAGAAAGGATCTTCATTTATTTCGTGCTTCGG
645 AGTTCATT-CTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGG
** * *
183072 CACTATAAACACATTCTCCCCAATAATATAAATGATATTGATGGTTTTCTTTTGCCTAAAAATCT
709 CACTATAAACACATTCTCCCCAATAGGATAAATGATATTGATGGTTTTCTTTTGCATGAAAATCT
* *
183137 TTTCTTTGCCTTATTTTCCTTAAAATCAACGATTGCACTTTAAATGAGACAAGCA-TAGATTCTC
774 TTTCTTTGCCTTATTTTCCTTAAAATCAAAGATTGTACTTTAAATGAGACAAGCATTA-ATTCTC
*
183201 GTAAAAGTCTCCACTCTTTCCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGAATACATGA
838 GTAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGAATACATGA
183266 CATTGATG
903 CATTGATG
183274 AATAGTCATA
Statistics
Matches: 1635, Mismatches: 202, Indels: 54
0.86 0.11 0.03
Matches are distributed among these distances:
947 2 0.00
948 188 0.11
949 506 0.31
950 151 0.09
951 671 0.41
952 71 0.04
953 46 0.03
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.36
Consensus pattern (946 bp):
TTGATAAAATCAAAGTTTGTCTCTTAAATAAGACAAACTTGAATACTCATACTAATCCATTCTTT
TCTAGATTAGGCACCATAAACATAGTCTTCTAATAAGGATACATGATATTGATGATTTGGTTTCG
CAAGAAACGCTTTCTTCCCACAAATTTTTGTAAATTCATAAGTTCGTGCCTCAAATGAGACAAAC
AAGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTA
GGATAAATGATATTGATGGTTTTTTTTGCATGGAAATCTTTTCTTTGACTTATTTTCCTTAAAAT
CAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATT
GGGAACCAAAAACACATTCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAG
CTGTTCATCCCACCGTTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGT
CATACTAATCCATTTTCTTTTTTGGATTAGGCACCATAAACATTGTCTTCTTATAAGGATACATG
ATATCGATGCTTTGGTTTCGTAAGAAACGCTTTCTTCCCACCAATTTTTGAAAAGTATAAGTTCA
TTCTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATA
AACACATTCTCCCCAATAGGATAAATGATATTGATGGTTTTCTTTTGCATGAAAATCTTTTCTTT
GCCTTATTTTCCTTAAAATCAAAGATTGTACTTTAAATGAGACAAGCATTAATTCTCGTAAAAGT
CTCCATTCTTTCCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGAATACATGACATTGATG
CTTTGGTGTCGCAAGAGAAGCTTTTCTTCCCAACAT
Found at i:191343 original size:158 final size:156
Alignment explanation
Indices: 189749--198277 Score: 777
Period size: 159 Copynumber: 54.0 Consensus size: 156
189739 TTCTTTTCTG
* * * * *
189749 GATTACGCACCATAAACATAGTCTTCTCATAA-GGATACATGATATCGATGCTTTGGTTTCGTAA
1 GATTAGGCACCATAAACACAGTCTTCTCA-AATAGATACATGATATTGATGCTTTGGTTTCGCAA
* * * * * *
189813 GAAATGCTTTCTTCCCACCAATATTTG-AAAAGCATAAGTTCATTCCTCAAATTAGACAAACAAG
65 GAAACGCTTTCTTCCCACCAATTTTTGTAAAATCA-AAGTT-ATGCCTCAAATGAGACAAACATG
*
189877 GATTCTAGTAAGGATTTTCATTCATTT-AGT
128 GATTCTAGTAA-GATCTTCATTCATTTCA-T
* * * * * ** *
189907 GGTTAGGCACTATAAACACA-T-TGTCCCCAATAGGAT-CAATGATATTGATGGTTTTCTTTTGC
1 GATTAGGCACCATAAACACAGTCT-TCTCAAATA-GATAC-ATGATATTGATGCTTTGGTTTCG-
* ** *** ** * * * *
189969 CTAGAAACTTTTTCTT-TGTCTTATTTTCCT-TAAAATCAAAGTT-TGAACTTTAAATAAGACAT
62 CAAGAAACGCTTTCTTCCCACCAATTTT--TGTAAAATCAAAGTTATG--CCTCAAATGAGACAA
** * * * * * *
190031 GTATTGATTCTCGTAAAAGTCTCCATTCTTTTCAA
123 ACATGGATTCTAGTAAGA-TCTTCATTCATTTCAT
* * * * * ** * * * *
190066 CAGT-GGGAGCCAAAAACACATTCCCCT-TATTAGGATACATGACATTGATGCTTTGGTGTCGCA
1 GATTAGGCA-CCATAAACACAGTCTTCTCAAATA-GATACATGATATTGATGCTTTGGTTTCGCA
* * * * * * * *
190129 A-ATGAA-GCTGTTCTCCCCACC-GTTATTGATAAAATCAAAGTTTTTCTCTTAAATAACACAAA
64 AGA--AACGCT-TTCTTCCCACCAATTTTTG-TAAAATCAAAGTTATGC-CTCAAATGAGACAAA
* ** * *
190191 CATGAATAGTC-ATGCT-A-ATCCACTTTCTTTTC-T
124 CATGGAT--TCTA-G-TAAGATCTTCATTCATTTCAT
* * * *
190224 GGATTAGGCACCATAAACATAGTCTTCTCATAA-GGATACATGATATCGATGCTTTGGTTTCGTA
1 -GATTAGGCACCATAAACACAGTCTTCTCA-AATAGATACATGATATTGATGCTTTGGTTTCGCA
* * *
190288 AGAAACGCTTTCTTCCCACCAATTTTTG-AAAAGTAAAAATTCAT-TCTCCAAATGAGACAAACA
64 AGAAACGCTTTCTTCCCACCAATTTTTGTAAAA-TCAAAGTT-ATGCCT-CAAATGAGACAAACA
190351 TGGATTCTAGTAAGGATCTTCATTCATTTCAT
126 TGGATTCTAGTAA-GATCTTCATTCATTTCAT
* * * * * ** *
190383 GGTTAGGCACTATAAACACA-T-TGTCCCAAATAGGATAAATGATATTGATGGTTTTCTTTTGCT
1 GATTAGGCACCATAAACACAGTCT-TCTCAAATA-GATACATGATATTGATGCTTTGGTTTCGC-
** * ** ** * * * * * *
190446 TGGAAATC-TTTTCTTTGC-CTTATTTTCCT-TAAAATCAAAGTGTGTACTTTAAATGAGTCAAG
63 AAGAAA-CGCTTTCTTCCCACCAATTTT--TGTAAAATCAAAGT-TATGCCTCAAATGAGACAAA
* * * * *
190508 CATAGATTCTCGTAAAAGTCTCCATTC-TTTCCAA
124 CATGGATTCTAGTAAGA-TCTTCATTCATTT-CAT
* * * * * ** * *
190542 GATTGGGAACCAAAAACACATTC-CCTTGAATAGAATACATGACATTGATGCTTTGGTGTCGCAA
1 GATTAGGCACCATAAACACAGTCTTCTCAAATAG-ATACATGATATTGATGCTTTGGTTTCGCAA
* * * * * *
190606 GAGAA-GCTTTTCTTTCTAAC-GTTGTTGATAAAATCAAAGTT-TGTCTCTCAAATAAGACAAAC
65 GA-AACGC-TTTCTTCCCACCAATTTTTG-TAAAATCAAAGTTATG-C-CTCAAATGAGACAAAC
* * ** * *
190668 ATGAATAGTCATACT-A-ATCCACTTTCTTTTC-T
125 ATGGAT--TC-TAGTAAGATCTTCATTCATTTCAT
* * * * *
190700 GGATTAGCCACCATAAACATAGTCTTCTCATAA-GGATACATGATTTTGATGCTTTGGTTTTGCA
1 -GATTAGGCACCATAAACACAGTCTTCTCA-AATAGATACATGATATTGATGCTTTGGTTTCGCA
* * * *
190764 AGATACGCTTTCTTCTCACCAATTTTTGTAAAGT-ATGAGTTCATTG-CTCAAATGAGACAAACA
64 AGAAACGCTTTCTTCCCACCAATTTTTGTAAAATCA-AAGTT-A-TGCCTCAAATGAGACAAACA
* ** *
190827 TGGATTCTTGTTGGGATCTTCATTCATTTCCT
126 TGGATTCTAG-TAAGATCTTCATTCATTTCAT
* * * * ** * * * ** *
190859 CATTAGGCACTATAAACACATTCTCCTC-TTTATGATAAATGATATTTATGGTTTTCTTTTGCAT
1 GATTAGGCACCATAAACACAGTCTTCTCAAATA-GATACATGATATTGATGCTTTGGTTTCGCA-
* * *** ** * * *
190923 GGAAATC-TTTTCTT-TGTCTTATTTTCCT-TAAAATCAAAGTT-TGTACTTTAAATGAGACAAG
64 AGAAA-CGCTTTCTTCCCACCAATTTT--TGTAAAATCAAAGTTATG--CCTCAAATGAGACAAA
* * * * *
190984 CATTGATTCTCGTAAAAGTCTCCATTC-TTTCAAA
124 CATGGATTCTAGTAAGA-TCTTCATTCATTTC-AT
* * * * * * * *
191018 GATTGGGAACCAAAAACACATTC-CCTTC-ATTAGGATACATGACATTGATGCTTTGGTGTCGCA
1 GATTAGGCACCATAAACACAGTCTTC-TCAAATA-GATACATGATATTGATGCTTTGGTTTCGCA
* * * * *
191081 AGAGAA-GCTGTTCTCCCCACC-GTTATTG-ATAAATCAAAGTT-TGTCTCTTAAATAAGACAAA
64 AGA-AACGCT-TTCTTCCCACCAATTTTTGTA-AAATCAAAGTTATG-C-CTCAAATGAGACAAA
* * * ** * *
191142 CAAGAGTAGTCATACT-A-ATCCACTTTCTTTTC-T
124 CATG-G-ATTC-TAGTAAGATCTTCATTCATTTCAT
* *
191175 GGATTAGGCACCATAAACATAGTCTTCTCAAATAGATACATGATATCGATGCTTTGGTTTCGCAA
1 -GATTAGGCACCATAAACACAGTCTTCTCAAATAGATACATGATATTGATGCTTTGGTTTCGCAA
* *
191240 GAAACGCTTTCTTCCCACCAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAAACATGG
65 GAAACGCTTTCTTCCCACCAATTTTTGTAAAATCAAAGTT-ATGCCTCAAATGAGACAAACATGG
191305 ATTCTAGTAAGGATCTTCATTCATTTCAT
129 ATTCTAGTAA-GATCTTCATTCATTTCAT
* * * * * * ** *
191334 GATTAGGCACTATAAACACATTCTCCTC-ATTAGGATAAATGATATTGATGGTTTTCTTTTG-AA
1 GATTAGGCACCATAAACACAGTCTTCTCAAATA-GATACATGATATTGATGCTTTGGTTTCGCAA
*** ** ** * * * *
191397 TGAAAATATTTTCTTTGC-CTTATTTACCT-TAAAATCAAAGTT-TGTACTTTAAATGAGACAAG
65 -G-AAACGCTTTCTTCCCACCAATTT--TTGTAAAATCAAAGTTATG--CCTCAAATGAGACAAA
* ** * * * * *
191459 TATTAATTCTCGTAAAAGTCTCCATT-TTTTCCAA
124 CATGGATTCTAGTAAGA-TCTTCATTCATTT-CAT
* * * * * * * *
191493 GATT-GCGAACCAAAAACACATTC-CCTTC-ATTAGGATACATGACATTGATGCTTTGGTGTCAC
1 GATTAG-GCACCATAAACACAGTCTTC-TCAAATA-GATACATGATATTGATGCTTTGGTTTCGC
* * * * *
191555 AAGAGAA-GCTTTTCTT---TCTAATGTTGTTGATAAAATC-AAGTT-TGTCTCTTAAATAAGGC
63 AAGA-AACGC-TTTCTTCCCACCAAT-TT-TTG-TAAAATCAAAGTTATG-C-CTCAAATGAGAC
* * * ** * *
191614 AAACTTGAATACTCA-TACTA-ATCCCCATTCGTTTCAA
121 AAACATGGATTCT-AGTA--AGATCTTCATTCATTTCAT
* * * * * * *
191651 GATTAGCCACCATAAACATAGTCTTCTGATACT-GATACAGGATATTGATGATTTGGTTTCGCTA
1 GATTAGGCACCATAAACACAGTCTTCTCA-AATAGATACATGATATTGATGCTTTGGTTTCGCAA
* * * * ** * * * * * * *
191715 GGAACACTTTTTTCCCA-TAATTTTTACAGATTCTATGTTCGTGCCTCAAATGAGCCAAATATGG
65 GAAACGCTTTCTTCCCACCAATTTTTGTAAAATCAAAGTT-ATGCCTCAAATGAGACAAACATGG
* *
191779 ATTCTAGTAAGGATCATCATTCATTTCGT
129 ATTCTAGTAA-GATCTTCATTCATTTCAT
* * * * * * * *** * *
191808 GATTAGGCTCTATAAACACATTCTTCTC--CTCAGGATGCGTGATATTGATGGTTTTCATTAGCT
1 GATTAGGCACCATAAACACAGTCTTCTCAAAT-A-GATACATGATATTGATGCTTTGGTTTCGCA
* ** * * * * * * * *
191871 TGAAAATCTTTTCTTTGCC-TCACTTTTCT-TAAAATCAAAGATTGTACTTTAAATGAGACAAGC
64 AGAAACGC-TTTC-TTCCCACCAATTTT-TGTAAAATCAAAG-TTATGCCTCAAATGAGACAAAC
* * *
191934 AAT-GATTC-ACGTAAAAGTCTCCATT-ATTTCCAA
125 -ATGGATTCTA-GTAAGA-TCTTCATTCATTT-CAT
* * * * * * * * * *
191967 GATTGGGAACCAAAAAAACATTC-TCTTC-ATTAGGATATATGACATTGATGCTTTGGTGTCGTA
1 GATTAGGCACCATAAACACAGTCTTC-TCAAATA-GATACATGATATTGATGCTTTGGTTTCGCA
* * * * * * * *
192030 AGAGAA-GCTTTTTTTTCCAAC-GTTATTGATAAAATCAAAGTT-TGTCTCTTAAATAAGGCAAA
64 AGA-AACGC-TTTCTTCCCACCAATTTTTG-TAAAATCAAAGTTATG-C-CTCAAATGAGACAAA
* * * ** * * *
192092 CTTGAATACTCA-TACTA-ATCCACATTCTTTTTAG
124 CATGGATTCT-AGTA--AGATCTTCATTCATTTCAT
* * ** * * * *
192126 GATTAGGCACCCA-AAACATAGTCTTCTCATACGGATACAAGATATTGATGATTTAGTTTTGCAA
1 GATTAGGCA-CCATAAACACAGTCTTCTCAAATAGATACATGATATTGATGCTTTGGTTTCGCAA
* * * *
192190 GAAACGCTTTTTTCCCACCAATTTTTGTAAATTCTAAGTTCATGCC-CGAAATGGGACAAACATG
65 GAAACGCTTTCTTCCCACCAATTTTTGTAAAATCAAAGTT-ATGCCTC-AAATGAGACAAACATG
192254 GATTCTAGTAAGGATCTTCATTCATTTCAT
128 GATTCTAGTAA-GATCTTCATTCATTTCAT
* * * * ** * * * *
192284 GATTAGCCACTATAAACACATTCTCCTC-TTTAGGATA-ATTAATATTGATGGATTT-CTTTTGC
1 GATTAGGCACCATAAACACAGTCTTCTCAAATA-GATACA-TGATATTGAT-GCTTTGGTTTCGC
* *** ** * * *
192346 ATAGAAATC-TTTTCTT-TGTCTTATTTTCCT-TAAAATCAAAGTT-TGTACTTTAAATGAGATA
63 A-AGAAA-CGCTTTCTTCCCACCAATTTT--TGTAAAATCAAAGTTATG--CCTCAAATGAGACA
** * * * * * * * *
192407 GGCGTTGATTCTCGGAAAAGTCTCCATTCTTTTCAA
122 AACATGGATTCTAGTAAGA-TCTTCATTCATTTCAT
* * * * * ** * * *
192443 GATTGGGAACCAAAAACACATTC-CCTTC-GTTAGGATACATGACATTGACGCTTTGGTGTCGCA
1 GATTAGGCACCATAAACACAGTCTTC-TCAAATA-GATACATGATATTGATGCTTTGGTTTCGCA
* * * * * * * * *
192506 AGAGAA-GTTGTTCTCCCCTCC-GTTATTGATAGAATTAAAGTT-TGTCTCTAAACTAAGACAAA
64 AGA-AACGCT-TTCTTCCCACCAATTTTTG-TAAAATCAAAGTTATGCCTC-AAA-TGAGACAAA
* * ** * *
192568 CATGAATAGTCATACT-A-ATCCACTTTCTTTTC-T
124 CATGGAT--TC-TAGTAAGATCTTCATTCATTTCAT
* * * * * * * * *
192601 GGATTAGACGCCATACACATAGTCTTCTCATATGGATACATGATCTCGATGCTTTAGTTTCGCAA
1 -GATTAGGCACCATAAACACAGTCTTCTCAAATAGATACATGATATTGATGCTTTGGTTTCGCAA
* ** * *
192666 GATACGCTTTCTTCTGACCAATTTTTGTAAAGT-ATGAGTTCATTG-CTCAAATGAGACAAACAT
65 GAAACGCTTTCTTCCCACCAATTTTTGTAAAATCA-AAGTT-A-TGCCTCAAATGAGACAAACAT
* ** **
192729 GGATTCTTGTTGGGATCTTCATTCATTTCCG
127 GGATTCTAG-TAAGATCTTCATTCATTTCAT
* * * ** * * ** *
192760 GATTAGGCACTATAAACACATTTTTCTC-TTTACGATAAATGATACTT-ATGGTTTTCTTTTGCA
1 GATTAGGCACCATAAACACAGTCTTCTCAAATA-GATACATGATA-TTGATGCTTTGGTTTCGCA
* * *** ** * *
192823 TGGAAATC-TTTTCTT-TGTCTTATTTTCCT-TAAAATCAAAGTT-TGTACCTTAAATGAGACAT
64 -AGAAA-CGCTTTCTTCCCACCAATTTT--TGTAAAATCAAAGTTATG--CCTCAAATGAGACAA
* * * * * * * *
192884 GCGTTGATTCTCGTAAAAGTCTCCATTCTTTTCAA
123 ACATGGATTCTAGTAAGA-TCTTCATTCATTTCAT
* * * * *
192919 GATT-GTG-ATCCAAAAACACA-TAC-CCTTC-ATTAGGATACATGACATTGATGCTTTGGTGTC
1 GATTAG-GCA-CCATAAACACAGT-CTTC-TCAAATA-GATACATGATATTGATGCTTTGGTTTC
* * * * * * * * *
192979 GCCAGAGAA-GCTGTTCTCCCCACC-GTTATTGATAGAATTAAAGTT-TGTCTCTTAAATAAGAT
61 GCAAGA-AACGCT-TTCTTCCCACCAATTTTTG-TAAAATCAAAGTTATG-C-CTCAAATGAGAC
* ** * *
193041 AAACATGAATAGTC-A-TACCA-ATCCACTTTCTTTTC-T
121 AAACATGGAT--TCTAGTA--AGATCTTCATTCATTTCAT
* * * * * *
193077 AGATTAGGCACCATAAACATAGTCTGCTCATATGGATACATGATATCGATGCTTTGGTTTTGCAA
1 -GATTAGGCACCATAAACACAGTCTTCTCAAATAGATACATGATATTGATGCTTTGGTTTCGCAA
* * * *
193142 GAAACGCTTTCTTCCCGCCAATTTTTGTAAATTCTAAGTTCATGCCTCAAATGAGACAAACATTG
65 GAAACGCTTTCTTCCCACCAATTTTTGTAAAATCAAAGTT-ATGCCTCAAATGAGACAAACATGG
* * *
193207 ATTCTAGTAAGGATCATCATTTATTTCGT
129 ATTCTAGTAA-GATCTTCATTCATTTCAT
* * * *** * ** * ** *
193236 GATTAGGCACTATAAACACATTATTCTCCTCTGGATGGATGATATTGATGGTTTTCTTTTGCTTA
1 GATTAGGCACCATAAACACAGTCTTCTCAAATAGATACATGATATTGATGCTTTGGTTTCGC--A
* * * * * * * * * * *
193301 A-AAATC-TTTTCTTTGCC-TCACTTTCCT-TAAAATCAAAGATTGTACTTTAAATGCGACAAGC
64 AGAAA-CGCTTTC-TTCCCACCAATTT-TTGTAAAATCAAAG-TTATGCCTCAAATGAGACAAAC
* * * * *
193362 ATTGATTCTCGTAAAAGTCTCCATTC-TTTCCAA
125 ATGGATTCTAGTAAGA-TCTTCATTCATTT-CAT
* * * * * * *
193395 GATT-GGGAGCCAAAAACACA-TTTTCTTC-ATTAGGATATATGACATTGATGCTTTGGTGTCGC
1 GATTAGGCA-CCATAAACACAGTCTTC-TCAAATA-GATACATGATATTGATGCTTTGGTTTCGC
* * * * * * * *
193457 AAGAGAA-GCTTTTTTTTCCAAC-GTTATTGATAAAATCAAAGTT-TGTCTTTTAAAT-AAAGCA
63 AAGA-AACGC-TTTCTTCCCACCAATTTTTG-TAAAATCAAAGTTATG-C-CTCAAATGAGA-CA
* * * ** * * *
193518 AACTTGAATAGTCATACT-A-ATCCACATTCTTTTTAG
122 AACATGGAT--TC-TAGTAAGATCTTCATTCATTTCAT
* * * * *
193554 GATTAGGCACCATAAACATAGTCTTTTCATAA-GGATACGTGATATTGATGGTTTGGTTTCGCAA
1 GATTAGGCACCATAAACACAGTCTTCTCA-AATAGATACATGATATTGATGCTTTGGTTTCGCAA
* * * * *
193618 GAAAAC-CTTTCTTCCCACCAATTTTTGT-AAATGCTAA-TTTTGCGCCACAAATGAGACAAGCC
65 G-AAACGCTTTCTTCCCACCAATTTTTGTAAAAT-CAAAGTTAT--GCCTCAAATGAGACAAACA
*
193680 TGGATTCTAGTAAGGATCTTCACTCATTTCAT
126 TGGATTCTAGTAA-GATCTTCATTCATTTCAT
* * * * * * ** *
193712 GATTAGGCACTATAAACACATTCTCCTC--ATCAGGATAAACGATATTGATGGTTTTCTTTTGCA
1 GATTAGGCACCATAAACACAGTCTTCTCAAAT-A-GATACATGATATTGATGCTTTGGTTTCGCA
* ** ** ** * * * *
193775 TGAAAATCTTTTCTTTGC-CTTATTTTCCT-TAAAATCAATGTT-TGTACTTTAAATGAGACAAG
64 AGAAACGC-TTTCTTCCCACCAATTTT--TGTAAAATCAAAGTTATG--CCTCAAATGAGACAAA
* * * * * *
193837 CATTGATTC-ACATAAAAGTCTCCATT-TTTTCCAA
124 CATGGATTCTA-GTAAGA-TCTTCATTCATTT-CAT
* * * * * ** * * * *
193871 GATTGGGAACTAAAAACACATTC-TCTTGATTAGGATACATGACATTGATGCTTTGGTGTCACAA
1 GATTAGGCACCATAAACACAGTCTTCTCAAATA-GATACATGATATTGATGCTTTGGTTTCGCAA
* * * * *
193935 GAGAA-GCTTTTCTT---TCTAATGTTGTTGATAAAATC-AAGTT-TGTCTCTTAAATAAGGCAA
65 GA-AACGC-TTTCTTCCCACCAAT-TT-TTG-TAAAATCAAAGTTATG-C-CTCAAATGAGACAA
* * * * ** * *
193994 GCCA-GAATACTCA-CACTA-ATCCCCATTCTTTTCAG
123 -ACATGGATTCT-AGTA--AGATCTTCATTCATTTCAT
* * * * * * *
194029 GATTAGCCACCATAAACATAGTCTTCT--GATACGAATACAGGATATTGATGATTTGGTTTTGCT
1 GATTAGGCACCATAAACACAGTCTTCTCAAATA-G-ATACATGATATTGATGCTTTGGTTTCGCA
* * * * * * *
194092 AGGAATGCTTT-TTCCCA-CAATTTTTGTAGATTCTATGTTCGTGCCTCAAATGAGACAAACATG
64 AGAAACGCTTTCTTCCCACCAATTTTTGTAAAATCAAAGTT-ATGCCTCAAATGAGACAAACATG
* * *
194155 GATTCTAGTAAGGATCATCATACATTTCGT
128 GATTCTAGTAA-GATCTTCATTCATTTCAT
* * * *
194185 GATTAGGCACTATAAACACATTATTCTC--CTCAGGATACATGATATTGATGCTTTGGTTTCGCA
1 GATTAGGCACCATAAACACAGTCTTCTCAAAT-A-GATACATGATATTGATGCTTTGGTTTCGCA
** * * * * * *
194248 AGAAAAACTTTCTTCCCACCAATTTTTGT-AAATGCTAATTTCGTGCCCCGAATGAGACAAGCAT
64 AGAAACGCTTTCTTCCCACCAATTTTTGTAAAAT-CAAAGTT-ATGCCTCAAATGAGACAAACAT
*
194312 GGATTCTAGTAAGGATCTTCATTCATTTCAA
127 GGATTCTAGTAA-GATCTTCATTCATTTCAT
* * * * * * * * ** * **
194343 GATTAGGCACTATAAACGCATTCTCCTCATCA-AGATAAACGATATTGATGGTTTTCTTTTGCTT
1 GATTAGGCACCATAAACACAGTCTTCTCA-AATAGATACATGATATTGATGCTTTGGTTTCGCAA
** ** ** * * * *
194407 GAAAATCTTTTCTTTGC-CTTATTTTCCT-TAAAATCAATGTT-TGTACTTTAAATGAGACAAGC
65 GAAACGC-TTTCTTCCCACCAATTTT--TGTAAAATCAAAGTTATG--CCTCAAATGAGACAAAC
* * * * * *
194469 ATTGATT-TGCGTAAAAGTCTCCATT-TTTTCCAA
125 ATGGATTCT-AGTAAGA-TCTTCATTCATTT-CAT
* * * * * * * * * *
194502 GATTGGGAAGCAAAAACACATTC-TCTTC-ATTAGGATACAAGACATTGATGCTTTGGTGTCACA
1 GATTAGGCACCATAAACACAGTCTTC-TCAAATA-GATACATGATATTGATGCTTTGGTTTCGCA
** * * *** * * * *
194565 AGAGAA-GCTTTTCTTTCTAATTTTCAA-GTTTGT-CTCTTAAA--TAAG--GCAAACT-TGA-A
64 AGA-AACGC-TTTC-TTCCCA---CCAATTTTTGTAAAATCAAAGTTATGCCTCAAA-TGAGACA
* * * ** ** **
194621 TAC-T-CA--C-ACT-A-ATCCCCATTATTTTCCG
122 AACATGGATTCTAGTAAGATCTTCATTCATTTCAT
* * * * ** * * * *
194649 GATTCGCCACCATAAACATAGTCTTCTAAAACGGATACAGGATATTGATGATTTGGTTTTGCTAG
1 GATTAGGCACCATAAACACAGTCTTCTCAAATAGATACATGATATTGATGCTTTGGTTTCGCAAG
* * * * * * * *
194714 GAACACTTTTTTCCCA-CAATTTTTGT-AGATTATATGTTCGTGCCTCAAATGAGACAAATATGG
66 AAACGCTTTCTTCCCACCAATTTTTGTAAAATCA-AAGTT-ATGCCTCAAATGAGACAAACATGG
* *
194777 ATTCTAGTAAGGATCATCATTCGA-TTCGT
129 ATTCTAGTAA-GATCTTCATTC-ATTTCAT
* * ** * * * * ** *
194806 GATTAGGCACTATAAACACATTCTTC-C-CCTCAGGATGCGTGATATTTATGATTTTCTTTTGCT
1 GATTAGGCACCATAAACACAGTCTTCTCAAAT-A-GATACATGATATTGATGCTTTGGTTTCGC-
* * * * * * * * * * * * *
194869 TATAAATC-TTTTCTTTGCC-TCACTTTCCT-TAAAATCAAAGATTGTACTTTAAATGGGACAAG
63 AAGAAA-CGCTTTC-TTCCCACCAATTT-TTGTAAAATCAAAG-TTATGCCTCAAATGAGACAAA
* * * * *
194931 CATTGATTCTCGTAAAAGTCTCCATT-ATTTTCAA
124 CATGGATTCTAGTAAGA-TCTTCATTCA-TTTCAT
* * * * * * * *
194965 GATTGGGAACCAAAAACACATTC-TCTTC-ATTAGGATATATGACATTGATGCTTTGGTGTCGCA
1 GATTAGGCACCATAAACACAGTCTTC-TCAAATA-GATACATGATATTGATGCTTTGGTTTCGCA
* * * * * * *
195028 AGAGAA-GCTTTTCTTTCCAAC-GTTATTGATAAAATC-AAGTT-TGTCTCTTAAATAAGGCAAG
64 AGA-AACGC-TTTCTTCCCACCAATTTTTG-TAAAATCAAAGTTATG-C-CTCAAATGAGACAA-
* * * ** * *
195089 CCA-GAATACTCA-TACTA-ATCCCCATTCTTTTCAG
123 ACATGGATTCT-AGTA--AGATCTTCATTCATTTCAT
* * * * ** * * * ** *
195123 GATTAGCCACCATAAACATAGTCTTCTGATACGGATACAGGATATTGAAGATTTGGTTTTTCTAG
1 GATTAGGCACCATAAACACAGTCTTCTCAAATAGATACATGATATTGATGCTTTGGTTTCGCAAG
* * * * * * * *
195188 GAATGCTTT-TTCCCA-TAATTTTTGTAGATTCTATGTTTGTGCCTCAAATGAGACAAACATGGA
66 AAACGCTTTCTTCCCACCAATTTTTGTAAAATCAAAG-TTATGCCTCAAATGAGACAAACATGGA
* *
195251 TTCTAGTAAGGATCATCATACATTTCAT
130 TTCTAGTAA-GATCTTCATTCATTTCAT
* * *
195279 GATTAGGCACTATAAACACATTCTTCTC--CTCAGGATACATGATATTGATGCTTTGGTTTCGCA
1 GATTAGGCACCATAAACACAGTCTTCTCAAAT-A-GATACATGATATTGATGCTTTGGTTTCGCA
** * * * * *
195342 AGAAAAACTTTCTTCCCACCAATTTTTGT-AAATGCTAATTTCATGCCCCGAATGAGACAAGCAT
64 AGAAACGCTTTCTTCCCACCAATTTTTGTAAAAT-CAAAGTT-ATGCCTCAAATGAGACAAACAT
*
195406 GGATTCTTGTAAGGATCTTCACTT-ATTTCAT
127 GGATTCTAGTAA-GATCTTCA-TTCATTTCAT
* * * * ** *
195437 GATTAGGCACTATAAACACATTC-TCTTC--ATCAGGATAAATGATATTGATGGTTTTCTTTTGC
1 GATTAGGCACCATAAACACAGTCTTC-TCAAAT-A-GATACATGATATTGATGCTTTGGTTTCGC
** ** ** ** * * *
195499 TTGAAAATCTTTTCTTTGC-CTTATTTTCCT-TAAAATCAATGTT-TGTACTTTAAATGAGACAA
63 AAGAAACGC-TTTCTTCCCACCAATTTT--TGTAAAATCAAAGTTATG--CCTCAAATGAGACAA
* * ** * * * *
195561 GCATTGATTCGCGTAAAAGTCTCCATT-TTTTCCAA
123 ACATGGATTCTAGTAAGA-TCTTCATTCATTT-CAT
* * * * * * * * ** * *
195596 GATTGGGAAGCAAAAACACATTC-TCTTC-ATTAGGATACAAGACATTGATTTTTTGGTGTCACA
1 GATTAGGCACCATAAACACAGTCTTC-TCAAATA-GATACATGATATTGATGCTTTGGTTTCGCA
* * * * * * *
195659 AGAGAA-GCTTTCTTTCTA--ATATTGTTGATAAAATC-GAGTTTATCTCCT-AAATAAGGCAAA
64 AGA-AACGCTTTCTTCCCACCA-ATTTTTG-TAAAATCAAAG-TTAT-GCCTCAAATGAGACAAA
* ** * *
195719 C-TTGATTACTCA-TACTA-ATCCCCATTCTTTTCAA
124 CATGGATT-CT-AGTA--AGATCTTCATTCATTTCAT
* * * * * * * * *
195753 GATTTGCCACCATAAACATAGTCTTCTGAAACAGATACAGGATATTGATGATTTGGTTTTGCTAG
1 GATTAGGCACCATAAACACAGTCTTCTCAAATAGATACATGATATTGATGCTTTGGTTTCGCAAG
* * * * * * * *
195818 GAACACTTTTTTCCCA-CAATTTTTGTAGATTCTATGTTCGTGCCTCAAATGAGACAAACATGGA
66 AAACGCTTTCTTCCCACCAATTTTTGTAAAATCAAAGTT-ATGCCTCAAATGAGACAAACATGGA
* *
195882 TTCTAGTAAGGATCATCATTCGA-TTCGT
130 TTCTAGTAA-GATCTTCATTC-ATTTCAT
* * * * * * * ** *
195910 GATTAGGCACTATAAATACATTCTTCTC--CTCAGGATGCATGTTATTGATGGTTTTCTTTTGCT
1 GATTAGGCACCATAAACACAGTCTTCTCAAAT-A-GATACATGATATTGATGCTTTGGTTTCGC-
* * * * * * * * * * * * * *
195973 TATAAATC-TTTTCTTTGCC-TCACTTTCCT-TAAAATTAAAGATTGTACTTTAAATGGGACAAG
63 AAGAAA-CGCTTTC-TTCCCACCAATTT-TTGTAAAATCAAAG-TTATGCCTCAAATGAGACAAA
* * * * * *
196035 CATTGATTCTCGTAAAAGTCTCCATTCTTTTCAA
124 CATGGATTCTAGTAAGA-TCTTCATTCATTTCAT
* * * * * * * *
196069 GATTGGGAACCAAAAACACATTC-TCTTC-ATTAGGATATATGACATTGATGCTTTGGTGTCGCA
1 GATTAGGCACCATAAACACAGTCTTC-TCAAATA-GATACATGATATTGATGCTTTGGTTTCGCA
* * * * *
196132 AGAGAA-GCTTTTCTTTCCAACC--TTATTGATAAAATCAAAGTT-TGTCTCTTAAATAAGGCAA
64 AGA-AACGC-TTTC-TTCCCACCAATTTTTG-TAAAATCAAAGTTATG-C-CTCAAATGAGACAA
* * * ** * *
196193 ACTTGAATAGTCATACT-A-ATCCACATTCATTTTAG
123 ACATGGAT--TC-TAGTAAGATCTTCATTCATTTCAT
* * * *
196228 GATTAGGCACCATAAAAATAGTCTTTTCACAA-GGATACATGATATTGATGCTTTGGTTTCGCAA
1 GATTAGGCACCATAAACACAGTCTTCTCA-AATAGATACATGATATTGATGCTTTGGTTTCGCAA
* * * * * * *
196292 GAAA--CTTTCTTCCCAACAATTTTTGT-AAATGCTAATTTCGTGCCCCAAATGAGACAAGCAAG
65 GAAACGCTTTCTTCCCACCAATTTTTGTAAAAT-CAAAGTT-ATGCCTCAAATGAGACAAACATG
196354 GATTCTAGTAAGGATCTTCATTCATTTCAT
128 GATTCTAGTAA-GATCTTCATTCATTTCAT
* * * * ** *
196384 GATTAGGCACTATAAACACATTCTTCTC--ATCAGGATAAATGATATTGATGGTTTTCTTTTGCA
1 GATTAGGCACCATAAACACAGTCTTCTCAAAT-A-GATACATGATATTGATGCTTTGGTTTCGCA
* ** ** ** * * * *
196447 TGAAAATCTTTTCTTTGC-CTTATTTTCCT-TAAAATCAATGTT-TGTACTTTAAATGAGACAAG
64 AGAAACGC-TTTCTTCCCACCAATTTT--TGTAAAATCAAAGTTATG--CCTCAAATGAGACAAA
* * * * *
196509 CATTGATTCTCGTAAAAGTCTCCATT--TTCTCCAA
124 CATGGATTCTAGTAAGA-TCTTCATTCATT-T-CAT
* * * * ** * *
196543 GATT-GGTAACCAAAAACACATTC-TCTTC-ATTAGGATACATGACGTTGATGCTTTGGTGTCAC
1 GATTAGG-CACCATAAACACAGTCTTC-TCAAATA-GATACATGATATTGATGCTTTGGTTTCGC
* * * * * * * *
196605 AAGAGAA-GCTTTTCTTTCTA--ATATTGTTGATAAAATC-GAGTTTATCTCCT-GAATAAGGCA
63 AAGA-AACGC-TTTCTTCCCACCA-ATTTTTG-TAAAATCAAAG-TTAT-GCCTCAAATGAGACA
** * *
196665 AACAT-GATTACTCA-TACTA-ATCCCCATTCTTTTCAA
122 AACATGGATT-CT-AGTA--AGATCTTCATTCATTTCAT
* * * * * * * * *
196701 GATTTGCCACCATAAACATAGTCTTCTGAAACAGATACAGGATATTGATGATTTGGTTTTGCTAG
1 GATTAGGCACCATAAACACAGTCTTCTCAAATAGATACATGATATTGATGCTTTGGTTTCGCAAG
* * * * * * * * *
196766 GAACACTTTTTTCCCA-CAATTTTTGTAGATTCTATGTTTGTGCCTCAAATGAGACAAACATAGA
66 AAACGCTTTCTTCCCACCAATTTTTGTAAAATCAAAG-TTATGCCTCAAATGAGACAAACATGGA
* *
196830 TTCTAGTAAGGATCATCATTCATTTCGT
130 TTCTAGTAA-GATCTTCATTCATTTCAT
* * * * * * *
196858 GATTAGGCACTATGAACACATTCTTCTC--TTCAGGATGCATGATATTGATGGTTT--TCTTCTA
1 GATTAGGCACCATAAACACAGTCTTCTCAAAT-A-GATACATGATATTGATGCTTTGGT-TTC-G
* * * * * * * * * * *
196919 CTTATAAATC-TTTTCTTTACC-TCACTTTCCT-TAAAATCAAAGATTGTACTTTAAATGAGACA
62 C-AAGAAA-CGCTTTC-TTCCCACCAATTT-TTGTAAAATCAAAG-TTATGCCTCAAATGAGACA
* * * *
196981 AGCATTGATTCTCA-TAA-ATGTCTCCATTC-TTTCAA
122 AACATGGATTCT-AGTAAGA--TCTTCATTCATTTCAT
* * * * * * * * * *
197016 GATTGGGAACCAAAAACACATTC-TCTTC-ATTAGGATATATGACATTAATGCTTTGGTGTCACA
1 GATTAGGCACCATAAACACAGTCTTC-TCAAATA-GATACATGATATTGATGCTTTGGTTTCGCA
** * * * * * **
197079 AGAGAA-GCTTTTCTTTGCAAC-GTTGTTGATAAAATCAAAGTT-TGTCTCTTAAATAAGGTAAA
64 AGA-AACGC-TTTCTTCCCACCAATTTTTG-TAAAATCAAAGTTATG-C-CTCAAATGAGACAAA
* * * ** * * *
197141 CTTGAATAGTCATACT-A-ATCCACATTCTTTTTAG
124 CATGGAT--TC-TAGTAAGATCTTCATTCATTTCAT
* * * *
197175 GATTAGGCACCATAAAAATAGTCTTTTCATAA-GGATACATGATATTGATGCTTTGGTTTCGCAA
1 GATTAGGCACCATAAACACAGTCTTCTCA-AATAGATACATGATATTGATGCTTTGGTTTCGCAA
** * * * * * * *
197239 GAAAAACTTTCTTCCTACCAATTTTTGT-AAATGCTAATTTCGTGCCCCAAATGAGGCAAGCATG
65 GAAACGCTTTCTTCCCACCAATTTTTGTAAAAT-CAAAGTT-ATGCCTCAAATGAGACAAACATG
197303 GATTCTAGTAAGGATCTTCATTCATTTC--
128 GATTCTAGTAA-GATCTTCATTCATTTCAT
* ** * * * *
197331 GCA--A-G-A--A-AAACACATTC-TCTTTATTAGGATACATGACATTGATGCTTTGGTGTCACA
1 G-ATTAGGCACCATAAACACAGTCTTCTCAAATA-GATACATGATATTGATGCTTTGGTTTCGCA
* * * * *
197388 AGAGAA-GCTTTTCTT---TCTAATGTTGTTGATAAAATC-AAGTT-TGTCTCTAAATTATGGCA
64 AGA-AACGC-TTTCTTCCCACCAAT-TT-TTG-TAAAATCAAAGTTATGCCTC-AAATGA-GACA
* * * * ** * **
197447 AACTTGAATACCCA-TACTA-ATCCCCATTCTTTTCCG
122 AACATGGAT-TCTAGTA--AGATCTTCATTCATTTCAT
* * * * * * * * * * *
197483 GATTAGCCACCATAAACATAGTCTTCTGATACAGATATAGGATATTGATGATTTAGTTTTGCTAG
1 GATTAGGCACCATAAACACAGTCTTCTCAAATAGATACATGATATTGATGCTTTGGTTTCGCAAG
* * * * * * * * *
197548 GAACGCTTT-TTACCCA-CAATTTTTGTAGATTCTATGTCTGTGCCTGACATGAGACAAACACGG
66 AAACGCTTTCTT-CCCACCAATTTTTGTAAAATCAAAGT-TATGCCTCAAATGAGACAAACATGG
* * * *
197611 ATTCTAGTGAGGATCATCATACATTTCGT
129 ATTCTAGT-AAGATCTTCATTCATTTCAT
* * * * * *
197640 GACTACGCACTATAAACACATTATTCTC--CTCAGGATACATGATATTGATGCTTTGGTTTCGCA
1 GATTAGGCACCATAAACACAGTCTTCTCAAAT-A-GATACATGATATTGATGCTTTGGTTTCGCA
** ** * * * * *
197703 AGAAAAACTTTCTTCCCACCAATTTTTGTAAACGCTAATTTCGTGCCCCAAATGAGACAAGCATG
64 AGAAACGCTTTCTTCCCACCAATTTTTGTAAAATCAAAGTT-ATGCCTCAAATGAGACAAACATG
197768 GATTCTAGTAAGGATCTTCATTCATTTCAT
128 GATTCTAGTAA-GATCTTCATTCATTTCAT
* * * * * ** *
197798 GATTAGGCACTATAAACACATTCTCCTC--ATCAGGATAAATGATATTGATGGTTTTCTTTTGCA
1 GATTAGGCACCATAAACACAGTCTTCTCAAAT-A-GATACATGATATTGATGCTTTGGTTTCGCA
* ** ** ** * ** * * *
197861 TGAAAATCTTTTCTTTGC-CTTATTTTCCT-TAAAATTAGTGTT-TGTACTTTAAATGAGACAAG
64 AGAAACGC-TTTCTTCCCACCAATTTT--TGTAAAATCAAAGTTATG--CCTCAAATGAGACAAA
* * * *
197923 CATTGATTCTCA-TAAAAGTCTCCATTC-TTTCCAC
124 CATGGATTCT-AGTAAGA-TCTTCATTCATTT-CAT
* * * * * * *
197957 GGTT-GGGATCCAAAAACACATTC-TCTTC-ATTAGGATACATGACATTGATGCTTTGGTGTCGC
1 GATTAGGCA-CCATAAACACAGTCTTC-TCAAATA-GATACATGATATTGATGCTTTGGTTTCGC
* * * * * * *
198019 AAGAGAA-GCTTTTCTTTCCAAC-GTTATTGATAAAATCAAAGTT-TGTCTCTTAAATAAGGCAA
63 AAGA-AACGC-TTTCTTCCCACCAATTTTTG-TAAAATCAAAGTTATG-C-CTCAAATGAGACAA
* * * ** * *
198081 ACTTGAATACTCA-TACTA-ATCCACATT-ATTTTTAG
123 ACATGGATTCT-AGTA--AGATCTTCATTCA-TTTCAT
* * * * * * * * *
198116 GATTAGGCACCCTAAACATAGTCTTCACATATGGATACAAGATATTGATGATTTAGTTTTGCAAG
1 GATTAGGCACCATAAACACAGTCTTCTCAAATAGATACATGATATTGATGCTTTGGTTTCGCAAG
* * * * * * * *
198181 AAACGCTTTTTTCCCTCCAAGTTTTGTAAATTCTAAGTTCGTGACTCAAATGGGACAAACATGGA
66 AAACGCTTTCTTCCCACCAATTTTTGTAAAATCAAAGTT-ATGCCTCAAATGAGACAAACATGGA
198246 TTCTAGTAAGGATCTTCATTCATTTCAT
130 TTCTAGTAA-GATCTTCATTCATTTCAT
198274 GATT
1 GATT
198278 TAGTTTTGCA
Statistics
Matches: 5876, Mismatches: 1819, Indels: 1352
0.65 0.20 0.15
Matches are distributed among these distances:
141 3 0.00
142 8 0.00
143 1 0.00
145 5 0.00
146 6 0.00
147 52 0.01
148 23 0.00
149 12 0.00
150 71 0.01
151 15 0.00
152 6 0.00
153 8 0.00
154 11 0.00
155 48 0.01
156 371 0.06
157 656 0.11
158 1928 0.33
159 2399 0.41
160 201 0.03
161 40 0.01
162 9 0.00
163 2 0.00
164 1 0.00
ACGTcount: A:0.30, C:0.18, G:0.15, T:0.36
Consensus pattern (156 bp):
GATTAGGCACCATAAACACAGTCTTCTCAAATAGATACATGATATTGATGCTTTGGTTTCGCAAG
AAACGCTTTCTTCCCACCAATTTTTGTAAAATCAAAGTTATGCCTCAAATGAGACAAACATGGAT
TCTAGTAAGATCTTCATTCATTTCAT
Found at i:194320 original size:631 final size:621
Alignment explanation
Indices: 193585--194851 Score: 2081
Period size: 631 Copynumber: 2.0 Consensus size: 621
193575 TCTTTTCATA
* *
193585 AGGATACGTGATATTGATGGTTTGGTTTCGCAAGAAAACCTTTCTTCCCACCAATTTTTGTAAAT
1 AGGATACGTGATATTGATGCTTTGGTTTCGCAAGAAAAACTTTCTTCCCACCAATTTTTGTAAAT
* * *
193650 GCTAATTTTGCGCCACAAATGAGACAAGCCTGGATTCTAGTAAGGATCTTCACTCATTTCATGAT
66 GCTAATTTCGCGCCACAAATGAGACAAGCATGGATTCTAGTAAGGATCTTCACTCATTTCAAGAT
*
193715 TAGGCACTATAAACACATTCTCCTCATCAGGATAAACGATATTGATGGTTTTCTTTTGCATGAAA
131 TAGGCACTATAAACACATTCTCCTCATCAAGATAAACGATATTGATGGTTTTCTTTTGCATGAAA
193780 ATCTTTTCTTTGCCTTATTTTCCTTAAAATCAATGTTTGTACTTTAAATGAGACAAGCATTGATT
196 ATCTTTTCTTTGCCTTATTTTCCTTAAAATCAATGTTTGTACTTTAAATGAGACAAGCATTGATT
*
193845 CACATAAAAGTCTCCATTTTTTCCAAGATTGGGAA-CTAAAAACACATTCTCTTGATTAGGATAC
261 CACATAAAAGTCTCCATTTTTTCCAAGATTGGGAAGC-AAAAACACATTCTCTTCATTAGGATAC
*
193909 ATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTTCTAATGTTGTTGATAAAATCAAGT
325 AAGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTTCTAA-----TT--T----TCAAGT
* *
193974 TTGTCTCTTAAATAAGGCAAGCCAGAATACTCACACTAATCCCCATTCTTTTCAGGATTAGCCAC
379 TTGTCTCTTAAATAAGGCAAACCAGAATACTCACACTAATCCCCATTATTTTCAGGATTAGCCAC
* * **
194039 CATAAACATAGTCTTCTGATACGAATACAGGATATTGATGATTTGGTTTTGCTAGGAATGC-TTT
444 CATAAACATAGTCTTCTAAAACGAATACAGGATATTGATGATTTGGTTTTGCTAGGAACACTTTT
*
194103 TTCCCACAATTTTTGTAGATTCTATGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGG
509 TTCCCACAATTTTTGTAGATTATATGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGG
*
194168 ATCATCATAC-ATTTCGTGATTAGGCACTATAAACACATTATTCTCCTC
574 ATCATCATACGA-TTCGTGATTAGGCACTATAAACACATTATTCCCCTC
*
194216 AGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAACTTTCTTCCCACCAATTTTTGTAAAT
1 AGGATACGTGATATTGATGCTTTGGTTTCGCAAGAAAAACTTTCTTCCCACCAATTTTTGTAAAT
* * * *
194281 GCTAATTTCGTGCCCCGAATGAGACAAGCATGGATTCTAGTAAGGATCTTCATTCATTTCAAGAT
66 GCTAATTTCGCGCCACAAATGAGACAAGCATGGATTCTAGTAAGGATCTTCACTCATTTCAAGAT
* *
194346 TAGGCACTATAAACGCATTCTCCTCATCAAGATAAACGATATTGATGGTTTTCTTTTGCTTGAAA
131 TAGGCACTATAAACACATTCTCCTCATCAAGATAAACGATATTGATGGTTTTCTTTTGCATGAAA
194411 ATCTTTTCTTTGCCTTATTTTCCTTAAAATCAATGTTTGTACTTTAAATGAGACAAGCATTGATT
196 ATCTTTTCTTTGCCTTATTTTCCTTAAAATCAATGTTTGTACTTTAAATGAGACAAGCATTGATT
** *
194476 TGCGTAAAAGTCTCCATTTTTTCCAAGATTGGGAAGCAAAAACACATTCTCTTCATTAGGATACA
261 CACATAAAAGTCTCCATTTTTTCCAAGATTGGGAAGCAAAAACACATTCTCTTCATTAGGATACA
194541 AGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTTCTAATTTTCAAGTTTGTCTCTTAAA
326 AGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTTCTAATTTTCAAGTTTGTCTCTTAAA
** * *
194606 TAAGGCAAACTTGAATACTCACACTAATCCCCATTATTTTCCGGATTCGCCACCATAAACATAGT
391 TAAGGCAAACCAGAATACTCACACTAATCCCCATTATTTTCAGGATTAGCCACCATAAACATAGT
*
194671 CTTCTAAAACGGATACAGGATATTGATGATTTGGTTTTGCTAGGAACACTTTTTTCCCACAATTT
456 CTTCTAAAACGAATACAGGATATTGATGATTTGGTTTTGCTAGGAACACTTTTTTCCCACAATTT
* *
194736 TTGTAGATTATATGTTCGTGCCTCAAATGAGACAAATATGGATTCTAGTAAGGATCATCATTCGA
521 TTGTAGATTATATGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCATCATACGA
*
194801 TTCGTGATTAGGCACTATAAACACATTCTTCCCCTC
586 TTCGTGATTAGGCACTATAAACACATTATTCCCCTC
*
194837 AGGATGCGTGATATT
1 AGGATACGTGATATT
194852 TATGATTTTC
Statistics
Matches: 597, Mismatches: 36, Indels: 16
0.92 0.06 0.02
Matches are distributed among these distances:
620 121 0.20
621 122 0.20
622 1 0.00
624 1 0.00
626 2 0.00
631 349 0.58
632 1 0.00
ACGTcount: A:0.30, C:0.19, G:0.16, T:0.35
Consensus pattern (621 bp):
AGGATACGTGATATTGATGCTTTGGTTTCGCAAGAAAAACTTTCTTCCCACCAATTTTTGTAAAT
GCTAATTTCGCGCCACAAATGAGACAAGCATGGATTCTAGTAAGGATCTTCACTCATTTCAAGAT
TAGGCACTATAAACACATTCTCCTCATCAAGATAAACGATATTGATGGTTTTCTTTTGCATGAAA
ATCTTTTCTTTGCCTTATTTTCCTTAAAATCAATGTTTGTACTTTAAATGAGACAAGCATTGATT
CACATAAAAGTCTCCATTTTTTCCAAGATTGGGAAGCAAAAACACATTCTCTTCATTAGGATACA
AGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTTCTAATTTTCAAGTTTGTCTCTTAAA
TAAGGCAAACCAGAATACTCACACTAATCCCCATTATTTTCAGGATTAGCCACCATAAACATAGT
CTTCTAAAACGAATACAGGATATTGATGATTTGGTTTTGCTAGGAACACTTTTTTCCCACAATTT
TTGTAGATTATATGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCATCATACGA
TTCGTGATTAGGCACTATAAACACATTATTCCCCTC
Found at i:195534 original size:631 final size:629
Alignment explanation
Indices: 194681--195959 Score: 1854
Period size: 631 Copynumber: 2.0 Consensus size: 629
194671 CTTCTAAAAC
* * * * * * *
194681 GGATACAGGATATTGATGATTTGGTTTTGCTAGGAACACTTTTTTCCCACAATTTTTGTAGATTA
1 GGATACATGATATTGATGATTTGGTTTCGCAAGAAAAACTTTCTTCCCACAATTTTTGTAAATTA
* * * *
194746 TATGTTCGTGCCTCAAATGAGACAAATATGGATTCTAGTAAGGATCATCATTCGATTCGTGATTA
66 TATGTTCATGCCCCAAATGAGACAAACATGGATTCTAGTAAGGATCATCATTC-ATTCATGATTA
* *** *
194811 GGCACTATAAACACATTCTTCCCCTCAGGATGCGTGATATTTATGATTTTCTTTTGCTTATAAAT
130 GGCACTATAAACACATTCTTCCCATCAGGATAAATGATATTGATGATTTTCTTTTGCTTATAAAT
* *
194876 CTTTTCTTTGCCTCACTTTCCTTAAAATCAAAGATTGTACTTTAAATGGGACAAGCATTGATTCT
195 CTTTTCTTTGCCTCACTTTCCTTAAAATCAAAGATTGTACTTTAAATGAGACAAGCATTGATTCG
* *
194941 CGTAAAAGTCTCCATTATTTT-CAAGATTGGGAACCAAAAACACATTCTCTTCATTAGGATATAT
260 CGTAAAAGTCTCCATT-TTTTCCAAGATTGGGAACCAAAAACACATTCTCTTCATTAGGATACAA
* *
195005 GACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCAACGTTATTGATAAAATCAAGTTT
324 GACATTGATGCTTTGGTGTCACAAGAGAAGC-TTTCTTTCCAACATTATTGATAAAATCAAGTTT
* * * *
195070 GTCTCTTAAATAAGGCAAGCCAGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGCCACCA
388 ATCTCCTAAATAAGGCAAACCAGAATACTCATACTAATCCCCATTCTTTTCAAGATTAGCCACCA
* * * **
195135 TAAACATAGTCTTCTGATACGGATACAGGATATTGAAGATTTGGTTTTTCTAGGAATGC-TTTTT
453 TAAACATAGTCTTCTGAAACAGATACAGGATATTGAAGATTTGGTTTTGCTAGGAACACTTTTTT
* *
195199 CCCATAATTTTTGTAGATTCTATGTTTGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGAT
518 CCCACAATTTTTGTAGATTCTATGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGAT
195264 CATCATAC-ATTTCATGATTAGGCACTATAAACACATTCTTCTCCTCA
583 CATCATACGA-TTCATGATTAGGCACTATAAACACATTCTTCTCCTCA
*
195311 GGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAACTTTCTTCCCACCAATTTTTGTAAATG
1 GGATACATGATATTGATGATTTGGTTTCGCAAGAAAAACTTTCTTCCCA-CAATTTTTGTAAAT-
* * * *
195376 CTA-AT-TTCATGCCCCGAATGAGACAAGCATGGATTCTTGTAAGGATCTTCACTT-ATTTCATG
64 -TATATGTTCATGCCCCAAATGAGACAAACATGGATTCTAGTAAGGATCATCA-TTCA-TTCATG
* *
195438 ATTAGGCACTATAAACACATTC-TCTTCATCAGGATAAATGATATTGATGGTTTTCTTTTGCTTG
126 ATTAGGCACTATAAACACATTCTTC-CCATCAGGATAAATGATATTGATGATTTTCTTTTGCTT-
* * * *
195502 A-AAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAATGTTTGTACTTTAAATGAGACAAGCATT
189 ATAAATCTTTTCTTTGCCTCACTTTCCTTAAAATCAAAGATTGTACTTTAAATGAGACAAGCATT
*
195566 GATTCGCGTAAAAGTCTCCATTTTTTCCAAGATTGGGAAGCAAAAACACATTCTCTTCATTAGGA
254 GATTCGCGTAAAAGTCTCCATTTTTTCCAAGATTGGGAACCAAAAACACATTCTCTTCATTAGGA
** * * * *
195631 TACAAGACATTGATTTTTTGGTGTCACAAGAGAAGCTTTCTTTCTAATATTGTTGATAAAATCGA
319 TACAAGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTCTTTCCAACATTATTGATAAAATCAA
** * *
195696 GTTTATCTCCTAAATAAGGCAAACTTGATTACTCATACTAATCCCCATTCTTTTCAAGATTTGCC
384 GTTTATCTCCTAAATAAGGCAAACCAGAATACTCATACTAATCCCCATTCTTTTCAAGATTAGCC
*
195761 ACCATAAACATAGTCTTCTGAAACAGATACAGGATATTGATGATTTGGTTTTGCTAGGAACACTT
449 ACCATAAACATAGTCTTCTGAAACAGATACAGGATATTGAAGATTTGGTTTTGCTAGGAACACTT
195826 TTTTCCCACAATTTTTGTAGATTCTATGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAA
514 TTTTCCCACAATTTTTGTAGATTCTATGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAA
* * *
195891 GGATCATCATTCGATTCGTGATTAGGCACTATAAATACATTCTTCTCCTCA
579 GGATCATCATACGATTCATGATTAGGCACTATAAACACATTCTTCTCCTCA
* *
195942 GGATGCATGTTATTGATG
1 GGATACATGATATTGATG
195960 GTTTTCTTTT
Statistics
Matches: 578, Mismatches: 61, Indels: 19
0.88 0.09 0.03
Matches are distributed among these distances:
630 187 0.32
631 383 0.66
632 6 0.01
633 2 0.00
ACGTcount: A:0.30, C:0.18, G:0.16, T:0.37
Consensus pattern (629 bp):
GGATACATGATATTGATGATTTGGTTTCGCAAGAAAAACTTTCTTCCCACAATTTTTGTAAATTA
TATGTTCATGCCCCAAATGAGACAAACATGGATTCTAGTAAGGATCATCATTCATTCATGATTAG
GCACTATAAACACATTCTTCCCATCAGGATAAATGATATTGATGATTTTCTTTTGCTTATAAATC
TTTTCTTTGCCTCACTTTCCTTAAAATCAAAGATTGTACTTTAAATGAGACAAGCATTGATTCGC
GTAAAAGTCTCCATTTTTTCCAAGATTGGGAACCAAAAACACATTCTCTTCATTAGGATACAAGA
CATTGATGCTTTGGTGTCACAAGAGAAGCTTTCTTTCCAACATTATTGATAAAATCAAGTTTATC
TCCTAAATAAGGCAAACCAGAATACTCATACTAATCCCCATTCTTTTCAAGATTAGCCACCATAA
ACATAGTCTTCTGAAACAGATACAGGATATTGAAGATTTGGTTTTGCTAGGAACACTTTTTTCCC
ACAATTTTTGTAGATTCTATGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATCAT
CATACGATTCATGATTAGGCACTATAAACACATTCTTCTCCTCA
Found at i:196465 original size:474 final size:474
Alignment explanation
Indices: 195279--198277 Score: 3326
Period size: 474 Copynumber: 6.3 Consensus size: 474
195269 TACATTTCAT
* * * *
195279 GATTAGGCACTATAAACACATTCTTCTC-CTCAGGATACATGATATTGATGCTTTGGTTTCGCAA
1 GATTAGGCACCATAAACATAGTCTTCTCAC-AAGGATACATGATATTGATGCTTTGGTTTCGCAA
* *
195343 GAAAAACTTTCTTCCCACCAATTTTTGTAAATGCTAATTTCATGCCCCGAATGAGACAAGCATGG
65 G--AAACTTTCTTCCCACCAATTTTTGTAAATGCTAATTTCGTGCCCCAAATGAGACAAGCATGG
*
195408 ATTCTTGTAAGGATCTTCACTT-ATTTCATGATTAGGCACTATAAACACATTC-TCTTCATCAGG
128 ATTCTAGTAAGGATCTTCA-TTCATTTCATGATTAGGCACTATAAACACATTCTTC-TCATCAGG
*
195471 ATAAATGATATTGATGGTTTTCTTTTGCTTGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATC
191 ATAAATGATATTGATGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATC
* * *
195536 AATGTTTGTACTTTAAATGAGACAAGCATTGATTCGCGTAAAAGTCTCCATT-TTTTCCAAGATT
256 AAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCATAAAAGTCTCCATTCTTTT-CAAGATT
* * **
195600 GGGAAGCAAAAACACATTCTCTTCATTAGGATACAAGACATTGATTTTTTGGTGTCACAAGAGAA
320 GGGAACCAAAAACACATTCTCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAA
* * * * * *
195665 GC-TTTCTTTCTAATATTGTTGATAAAATC-GAGTTTATCTCCTAAATAAGGCAAACTTGATTAC
385 GCTTTTCTTTCCAACATTGTTGATAAAATCAAAGTTTGTCTCTTAAATAAGGCAAACTTGAATAC
* *
195728 TCATACTAATCCCCATTC-TTTTCAA
450 TCATACTAATCCACATTCATTTT-AG
* * * * * * *
195753 GATTTGCCACCATAAACATAGTCTTCTGA-AACAGATACAGGATATTGATGATTTGGTTTTGCTA
1 GATTAGGCACCATAAACATAGTCTTCTCACAA-GGATACATGATATTGATGCTTTGGTTTCGC-A
* * * * * *
195817 GGAACACTTTTTTCCCA-CAATTTTTGTAGATTCT-ATGTTCGTGCCTCAAATGAGACAAACATG
64 AGAA-ACTTTCTTCCCACCAATTTTTGTAAATGCTAAT-TTCGTGCCCCAAATGAGACAAGCATG
* * * *
195880 GATTCTAGTAAGGATCATCATTCGA-TTCGTGATTAGGCACTATAAATACATTCTTCTCCTCAGG
127 GATTCTAGTAAGGATCTTCATTC-ATTTCATGATTAGGCACTATAAACACATTCTTCTCATCAGG
** * * * *
195944 ATGCATGTTATTGATGGTTTTCTTTTGC-TTATAAATCTTTTCTTTGCCTCACTTTCCTTAAAAT
191 ATAAATGATATTGATGGTTTTCTTTTGCATGA-AAATCTTTTCTTTGCCTTATTTTCCTTAAAAT
* * * *
196008 TAAAGATTGTACTTTAAATGGGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATT
255 CAAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCATAAAAGTCTCCATTCTTTTCAAGATT
* *
196073 GGGAACCAAAAACACATTCTCTTCATTAGGATATATGACATTGATGCTTTGGTGTCGCAAGAGAA
320 GGGAACCAAAAACACATTCTCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAA
* * *
196138 GCTTTTCTTTCCAACCTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGGCAAACTTGAATAG
385 GCTTTTCTTTCCAACATTGTTGATAAAATCAAAGTTTGTCTCTTAAATAAGGCAAACTTGAATAC
196203 TCATACTAATCCACATTCATTTTAG
450 TCATACTAATCCACATTCATTTTAG
* *
196228 GATTAGGCACCATAAAAATAGTCTTTTCACAAGGATACATGATATTGATGCTTTGGTTTCGCAAG
1 GATTAGGCACCATAAACATAGTCTTCTCACAAGGATACATGATATTGATGCTTTGGTTTCGCAAG
* *
196293 AAACTTTCTTCCCAACAATTTTTGTAAATGCTAATTTCGTGCCCCAAATGAGACAAGCAAGGATT
66 AAACTTTCTTCCCACCAATTTTTGTAAATGCTAATTTCGTGCCCCAAATGAGACAAGCATGGATT
196358 CTAGTAAGGATCTTCATTCATTTCATGATTAGGCACTATAAACACATTCTTCTCATCAGGATAAA
131 CTAGTAAGGATCTTCATTCATTTCATGATTAGGCACTATAAACACATTCTTCTCATCAGGATAAA
*
196423 TGATATTGATGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAATGT
196 TGATATTGATGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGT
* * *
196488 TTGTACTTTAAATGAGACAAGCATTGATTCTCGTAAAAGTCTCCATT-TTCTCCAAGATTGGTAA
261 TTGTACTTTAAATGAGACAAGCATTGATTCTCATAAAAGTCTCCATTCTT-TTCAAGATTGGGAA
*
196552 CCAAAAACACATTCTCTTCATTAGGATACATGACGTTGATGCTTTGGTGTCACAAGAGAAGCTTT
325 CCAAAAACACATTCTCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTT
* * * * * * * *
196617 TCTTTCTAATATTGTTGATAAAATC-GAGTTTATCTCCTGAATAAGGCAAACATGATTACTCATA
390 TCTTTCCAACATTGTTGATAAAATCAAAGTTTGTCTCTTAAATAAGGCAAACTTGAATACTCATA
* *
196681 CTAATCCCCATTC-TTTTCAA
455 CTAATCCACATTCATTTT-AG
* * * * * * *
196701 GATTTGCCACCATAAACATAGTCTTCTGA-AACAGATACAGGATATTGATGATTTGGTTTTGCTA
1 GATTAGGCACCATAAACATAGTCTTCTCACAA-GGATACATGATATTGATGCTTTGGTTTCGC-A
* * * * * * * *
196765 GGAACACTTTTTTCCCA-CAATTTTTGTAGATTCT-ATGTTTGTGCCTCAAATGAGACAAACATA
64 AGAA-ACTTTCTTCCCACCAATTTTTGTAAATGCTAAT-TTCGTGCCCCAAATGAGACAAGCATG
* * * *
196828 GATTCTAGTAAGGATCATCATTCATTTCGTGATTAGGCACTATGAACACATTCTTCTCTTCAGGA
127 GATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCACTATAAACACATTCTTCTCATCAGGA
** * * * * * *
196893 TGCATGATATTGATGGTTTTCTTCTAC-TTATAAATCTTTTCTTTACCTCACTTTCCTTAAAATC
192 TAAATGATATTGATGGTTTTCTTTTGCATGA-AAATCTTTTCTTTGCCTTATTTTCCTTAAAATC
* *
196957 AAAGATTGTACTTTAAATGAGACAAGCATTGATTCTCATAAATGTCTCCATTC-TTTCAAGATTG
256 AAAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCATAAAAGTCTCCATTCTTTTCAAGATTG
* *
197021 GGAACCAAAAACACATTCTCTTCATTAGGATATATGACATTAATGCTTTGGTGTCACAAGAGAAG
321 GGAACCAAAAACACATTCTCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAG
* * * *
197086 CTTTTCTTTGCAACGTTGTTGATAAAATCAAAGTTTGTCTCTTAAATAAGGTAAACTTGAATAGT
386 CTTTTCTTTCCAACATTGTTGATAAAATCAAAGTTTGTCTCTTAAATAAGGCAAACTTGAATACT
*
197151 CATACTAATCCACATTCTTTTTAG
451 CATACTAATCCACATTCATTTTAG
* * *
197175 GATTAGGCACCATAAAAATAGTCTTTTCATAAGGATACATGATATTGATGCTTTGGTTTCGCAAG
1 GATTAGGCACCATAAACATAGTCTTCTCACAAGGATACATGATATTGATGCTTTGGTTTCGCAAG
* *
197240 AAAAACTTTCTTCCTACCAATTTTTGTAAATGCTAATTTCGTGCCCCAAATGAGGCAAGCATGGA
66 --AAACTTTCTTCCCACCAATTTTTGTAAATGCTAATTTCGTGCCCCAAATGAGACAAGCATGGA
* *
197305 TTCTAGTAAGGATCTTCATTCATTTC--GCA--A-G-A--A-AAACACATTC-TCTTTATTAGGA
129 TTCTAGTAAGGATCTTCATTCATTTCATG-ATTAGGCACTATAAACACATTCTTC-TCATCAGGA
* * * ** * ** * * * * ***
197360 TACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTT--CTAATGTTGTTGATAAAAT
192 TAAATGATATTGATGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTAT-TT-TCCTTAAAAT
* * * * * * * * **
197423 C-AAGTTTGT-CTCTAAATTATGGCAAAC-TTGAATACCCATACTAA-TCCCCATTCTTTTCCGG
255 CAAAGTTTGTACTTTAAATGA-GACAAGCATTG-ATTCTCATA-AAAGTCTCCATTCTTTTCAAG
* ** * * * * * * * * * * * ** *
197484 ATTAGCCACCATAAACATAGTCT-TCTGA-TACAGATATAGGATATTGATGATTTAGTTTTGCTA
317 ATTGGGAACCAAAAACACATTCTCT-TCATTA-GGATACATGACATTGATGCTTTGGTGTCACAA
* * * * * * * * * * * *
197547 G-GAACGC-TTT-TTACCCACAATTTTTG-TAGATTCTATGTCTGTGC-CTGACATGAGACAAAC
380 GAGAA-GCTTTTCTTTCCAAC-ATTGTTGATAAAATCAAAGTTTGT-CTCTTAAATAAGGCAAAC
** * * * *
197607 ACGGAT--TC-TAGTGAGGAT-CATCATACA-TTTCG
442 TTGAATACTCATACT-A--ATCCA-CATTCATTTTAG
* * * * * * *
197639 TGACTACGCACTATAAACACATTATTCTC-CTCAGGATACATGATATTGATGCTTTGGTTTCGCA
1 -GATTAGGCACCATAAACATAGTCTTCTCAC-AAGGATACATGATATTGATGCTTTGGTTTCGCA
*
197703 AGAAAAACTTTCTTCCCACCAATTTTTGTAAACGCTAATTTCGTGCCCCAAATGAGACAAGCATG
64 AG--AAACTTTCTTCCCACCAATTTTTGTAAATGCTAATTTCGTGCCCCAAATGAGACAAGCATG
*
197768 GATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCATCAGGA
127 GATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCACTATAAACACATTCTTCTCATCAGGA
*
197833 TAAATGATATTGATGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATTA
192 TAAATGATATTGATGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCA
** * * *
197898 GTGTTTGTACTTTAAATGAGACAAGCATTGATTCTCATAAAAGTCTCCATTCTTTCCACGGTTGG
257 AAGTTTGTACTTTAAATGAGACAAGCATTGATTCTCATAAAAGTCTCCATTCTTTTCAAGATTGG
* *
197963 GATCCAAAAACACATTCTCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGC
322 GAACCAAAAACACATTCTCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGC
* *
198028 TTTTCTTTCCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGGCAAACTTGAATACTC
387 TTTTCTTTCCAACATTGTTGATAAAATCAAAGTTTGTCTCTTAAATAAGGCAAACTTGAATACTC
198093 ATACTAATCCACATT-ATTTTTAG
452 ATACTAATCCACATTCA-TTTTAG
* * * * * * * *
198116 GATTAGGCACCCTAAACATAGTCTTCACATATGGATACAAGATATTGATGATTTAGTTTTGCAAG
1 GATTAGGCACCATAAACATAGTCTTCTCACAAGGATACATGATATTGATGCTTTGGTTTCGCAAG
* * * * * * * * *
198181 AAACGCTTTTTTCCCTCCAAGTTTTGTAAATTCTAAGTTCGTGACTCAAATGGGACAAACATGGA
66 AAA--CTTTCTTCCCACCAATTTTTGTAAATGCTAATTTCGTGCCCCAAATGAGACAAGCATGGA
198246 TTCTAGTAAGGATCTTCATTCATTTCATGATT
129 TTCTAGTAAGGATCTTCATTCATTTCATGATT
198278 TAGTTTTGCA
Statistics
Matches: 2088, Mismatches: 352, Indels: 168
0.80 0.13 0.06
Matches are distributed among these distances:
462 3 0.00
463 3 0.00
464 6 0.00
465 192 0.09
466 47 0.02
467 104 0.05
468 3 0.00
469 1 0.00
470 2 0.00
471 1 0.00
472 14 0.01
473 532 0.25
474 776 0.37
475 216 0.10
476 176 0.08
477 6 0.00
478 3 0.00
479 3 0.00
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.36
Consensus pattern (474 bp):
GATTAGGCACCATAAACATAGTCTTCTCACAAGGATACATGATATTGATGCTTTGGTTTCGCAAG
AAACTTTCTTCCCACCAATTTTTGTAAATGCTAATTTCGTGCCCCAAATGAGACAAGCATGGATT
CTAGTAAGGATCTTCATTCATTTCATGATTAGGCACTATAAACACATTCTTCTCATCAGGATAAA
TGATATTGATGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGT
TTGTACTTTAAATGAGACAAGCATTGATTCTCATAAAAGTCTCCATTCTTTTCAAGATTGGGAAC
CAAAAACACATTCTCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAGAAGCTTTT
CTTTCCAACATTGTTGATAAAATCAAAGTTTGTCTCTTAAATAAGGCAAACTTGAATACTCATAC
TAATCCACATTCATTTTAG
Found at i:196559 original size:947 final size:948
Alignment explanation
Indices: 195310--198277 Score: 3951
Period size: 947 Copynumber: 3.1 Consensus size: 948
195300 TCTTCTCCTC
195310 AGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAACTTTCTTCCCACCAATTTTTGTAAAT
1 AGGATACATGATATTGATGCTTTGGTTTCGCAAG-AAAACTTTCTTCCCACCAATTTTTGTAAAT
* * *
195375 GCTAATTTCATGCCCCGAATGAGACAAGCATGGATTCTTGTAAGGATCTTCACTT-ATTTCATGA
65 GCTAATTTCGTGCCCCAAATGAGACAAGCATGGATTCTAGTAAGGATCTTCA-TTCATTTCATGA
*
195439 TTAGGCACTATAAACACATTCTCTTCATCAGGATAAATGATATTGATGGTTTTCTTTTGCTTGAA
129 TTAGGCACTATAAACACATTCTCTTCATCAGGATAAATGATATTGATGGTTTTCTTTTGCATGAA
195504 AATCTTTTCTTTGCCTTATTTTCCTTAAAATCAATGTTTGTACTTTAAATGAGACAAGCATTGAT
194 AATCTTTTCTTTGCCTTATTTTCCTTAAAATCAATGTTTGTACTTTAAATGAGACAAGCATTGAT
* * *
195569 TCGCGTAAAAGTCTCCATTTTTTCCAAGATTGGGAAGCAAAAACACATTCTCTTCATTAGGATAC
259 TCCCGTAAAAGTCTCCATTTTTTCCAAGATTGGCAACCAAAAACACATTCTCTTCATTAGGATAC
**
195634 AAGACATTGATTTTTTGGTGTCACAAGAGAAGCTTTCTTTCTAATATTGTTGATAAAATCGAGTT
324 AAGACATTGATGATTTGGTGTCACAAGAGAAGCTTTCTTTCTAATATTGTTGATAAAATCGAGTT
*
195699 TATCTCCTAAATAAGGCAAACTTGATTACTCATACTAATCCCCATTCTTTTCAAGATTTGCCACC
389 TATCTCCTAAATAAGGCAAACATGATTACTCATACTAATCCCCATTCTTTTCAAGATTTGCCACC
195764 ATAAACATAGTCTTCTGAAACAGATACAGGATATTGATGATTTGGTTTTGCTAGGAACACTTTTT
454 ATAAACATAGTCTTCTGAAACAGATACAGGATATTGATGATTTGGTTTTGCTAGGAACACTTTTT
195829 TCCCACAATTTTTGTAGATTCTATGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGA
519 TCCCACAATTTTTGTAGATTCTATGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGA
* * *
195894 TCATCATTCGA-TTCGTGATTAGGCACTATAAATACATTCTTCTCCTCAGGATGCATGTTATTGA
584 TCATCATTC-ATTTCGTGATTAGGCACTATAAACACATTCTTCTCATCAGGATGCATGATATTGA
195958 TGGTTTTCTTTTGCTTATAAATCTTTTCTTTGCCTCACTTTCCTTAAAATTAAAGATTGTACTTT
648 TGGTTTTCTTTTGCTTATAAATCTTTTCTTTGCCTCACTTTCCTTAAAATTAAAGATTGTACTTT
* *
196023 AAATGGGACAAGCATTGATTCTCGTAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACAC
713 AAATGAGACAAGCATTGATTCTCATAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACAC
196088 ATTCTCTTCATTAGGATATATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCAAC
778 ATTCTCTTCATTAGGATATATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCAAC
*
196153 CTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGGCAAACTTGAATAGTCATACTAATCCACA
843 GTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGGCAAACTTGAATAGTCATACTAATCCACA
196218 TTCATTTTAGGATTAGGCACCATAAAAATAGTCTTTTCACA
908 TTCATTTTAGGATTAGGCACCATAAAAATAGTCTTTTCACA
*
196259 AGGATACATGATATTGATGCTTTGGTTTCGCAAG-AAACTTTCTTCCCAACAATTTTTGTAAATG
1 AGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAACTTTCTTCCCACCAATTTTTGTAAATG
*
196323 CTAATTTCGTGCCCCAAATGAGACAAGCAAGGATTCTAGTAAGGATCTTCATTCATTTCATGATT
66 CTAATTTCGTGCCCCAAATGAGACAAGCATGGATTCTAGTAAGGATCTTCATTCATTTCATGATT
196388 AGGCACTATAAACACATTCT-TCTCATCAGGATAAATGATATTGATGGTTTTCTTTTGCATGAAA
131 AGGCACTATAAACACATTCTCT-TCATCAGGATAAATGATATTGATGGTTTTCTTTTGCATGAAA
196452 ATCTTTTCTTTGCCTTATTTTCCTTAAAATCAATGTTTGTACTTTAAATGAGACAAGCATTGATT
195 ATCTTTTCTTTGCCTTATTTTCCTTAAAATCAATGTTTGTACTTTAAATGAGACAAGCATTGATT
* * *
196517 CTCGTAAAAGTCTCCATTTTCTCCAAGATTGGTAACCAAAAACACATTCTCTTCATTAGGATACA
260 CCCGTAAAAGTCTCCATTTTTTCCAAGATTGGCAACCAAAAACACATTCTCTTCATTAGGATACA
* * *
196582 TGACGTTGATGCTTTGGTGTCACAAGAGAAGCTTTTCTTTCTAATATTGTTGATAAAATCGAGTT
325 AGACATTGATGATTTGGTGTCACAAGAGAAGC-TTTCTTTCTAATATTGTTGATAAAATCGAGTT
*
196647 TATCTCCTGAATAAGGCAAACATGATTACTCATACTAATCCCCATTCTTTTCAAGATTTGCCACC
389 TATCTCCTAAATAAGGCAAACATGATTACTCATACTAATCCCCATTCTTTTCAAGATTTGCCACC
196712 ATAAACATAGTCTTCTGAAACAGATACAGGATATTGATGATTTGGTTTTGCTAGGAACACTTTTT
454 ATAAACATAGTCTTCTGAAACAGATACAGGATATTGATGATTTGGTTTTGCTAGGAACACTTTTT
* *
196777 TCCCACAATTTTTGTAGATTCTATGTTTGTGCCTCAAATGAGACAAACATAGATTCTAGTAAGGA
519 TCCCACAATTTTTGTAGATTCTATGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGA
* *
196842 TCATCATTCATTTCGTGATTAGGCACTATGAACACATTCTTCTCTTCAGGATGCATGATATTGAT
584 TCATCATTCATTTCGTGATTAGGCACTATAAACACATTCTTCTCATCAGGATGCATGATATTGAT
* * * *
196907 GGTTTTCTTCTACTTATAAATCTTTTCTTTACCTCACTTTCCTTAAAATCAAAGATTGTACTTTA
649 GGTTTTCTTTTGCTTATAAATCTTTTCTTTGCCTCACTTTCCTTAAAATTAAAGATTGTACTTTA
*
196972 AATGAGACAAGCATTGATTCTCATAAATGTCTCCATTC-TTTCAAGATTGGGAACCAAAAACACA
714 AATGAGACAAGCATTGATTCTCATAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACA
* * *
197036 TTCTCTTCATTAGGATATATGACATTAATGCTTTGGTGTCACAAGAGAAGCTTTTCTTTGCAACG
779 TTCTCTTCATTAGGATATATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCAACG
* *
197101 TTGTTGATAAAATCAAAGTTTGTCTCTTAAATAAGGTAAACTTGAATAGTCATACTAATCCACAT
844 TTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGGCAAACTTGAATAGTCATACTAATCCACAT
* *
197166 TCTTTTTAGGATTAGGCACCATAAAAATAGTCTTTTCATA
909 TCATTTTAGGATTAGGCACCATAAAAATAGTCTTTTCACA
*
197206 AGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAACTTTCTTCCTACCAATTTTTGTAAAT
1 AGGATACATGATATTGATGCTTTGGTTTCGCAAG-AAAACTTTCTTCCCACCAATTTTTGTAAAT
*
197271 GCTAATTTCGTGCCCCAAATGAGGCAAGCATGGATTCTAGTAAGGATCTTCATTCATTTC--GCA
65 GCTAATTTCGTGCCCCAAATGAGACAAGCATGGATTCTAGTAAGGATCTTCATTCATTTCATG-A
* * * * * ** * ** * *
197334 --A-G-A--A-AAACACATTCTCTTTATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAG
129 TTAGGCACTATAAACACATTCTCTTCATCAGGATAAATGATATTGATGGTTTTCTTTTGCATGAA
* * *** * * * *
197392 AAGCTTTTCTTT--CTAATGTTGTTGATAAAATCAA-GTTTGT-CTCTAAATTATGGCAAAC-TT
194 AATCTTTTCTTTGCCTTAT-TT-TCCTTAAAATCAATGTTTGTACTTTAAATGA-GACAAGCATT
* * * * * * * * * * *
197452 GAATACCCATACTAA-TCCCCATTCTTTTCC-GGATTAGCCACCATAAACATAGTCT-TCTGA-T
256 G-ATTCCCGTA-AAAGTCTCCATT-TTTTCCAAGATTGGCAACCAAAAACACATTCTCT-TCATT
* * * * * * ** * * * *
197513 ACAGATATAGGATATTGATGATTTAGTTTTGCTAG-GAACGCTTT-TTACCCACA-ATTTTTG-T
317 A-GGATACAAGACATTGATGATTTGGTGTCACAAGAGAA-GCTTTCTT-TCTA-ATATTGTTGAT
* * * * * * * * * * ** ** * *
197574 AGATTCTATGTCTGT-GCCTGACATGAGACAAACACGGATT-CT-AGTGA-GGATCATCATACAT
378 AAAATCGA-GTTTATCTCCT-AAATAAGGCAAACA-TGATTACTCA-T-ACTAATCCCCATTCTT
** * * * * * * *** * *
197635 TTCGTGA-CTACGCACTATAAACACATTATTCT-CCTCAGGATACATGATATTGATGCTTTGGTT
438 TTCAAGATTTGC-CACCATAAACATAGTCTTCTGAAACA-GATACAGGATATTGATGATTTGGTT
* * * * * * ** *
197698 TCGCAAGAAAAACTTTCTTCCCACCAATTTTTGTAAACGCTAAT-TTCGTGCCCCAAATGAGACA
501 TTGCTAGGAACACTTTTTTCCCA-CAATTTTTGTAGATTCT-ATGTTCGTGCCTCAAATGAGACA
* * * *
197762 AGCATGGATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCA
564 AACATGGATTCTAGTAAGGATCATCATTCATTTCGTGATTAGGCACTATAAACACATTCTTCTCA
** * * *
197827 TCAGGATAAATGATATTGATGGTTTTCTTTTGCATGA-AAATCTTTTCTTTGCCTTATTTTCCTT
629 TCAGGATGCATGATATTGATGGTTTTCTTTTGC-TTATAAATCTTTTCTTTGCCTCACTTTCCTT
** * *
197891 AAAATTAGTGTTTGTACTTTAAATGAGACAAGCATTGATTCTCATAAAAGTCTCCATTCTTTCCA
693 AAAATTAAAGATTGTACTTTAAATGAGACAAGCATTGATTCTCATAAAAGTCTCCATTCTTTTCA
* * * *
197956 CGGTTGGGATCCAAAAACACATTCTCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAA
758 AGATTGGGAACCAAAAACACATTCTCTTCATTAGGATATATGACATTGATGCTTTGGTGTCGCAA
198021 GAGAAGCTTTTCTTTCCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGGCAAACTTG
823 GAGAAGCTTTTCTTTCCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGGCAAACTTG
* * *
198086 AATACTCATACTAATCCACATT-ATTTTTAGGATTAGGCACCCTAAACATAGTC--TTCACA
888 AATAGTCATACTAATCCACATTCA-TTTTAGGATTAGGCACCATAAAAATAGTCTTTTCACA
* * * * * * * *
198145 TATGGATACAAGATATTGATGATTTAGTTTTGCAAGAAACGCTTTTTTCCCTCCAAGTTTTGTAA
1 -A-GGATACATGATATTGATGCTTTGGTTTCGCAAGAAA-ACTTTCTTCCCACCAATTTTTGTAA
* * * * * *
198210 ATTCTAAGTTCGTGACTCAAATGGGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCATG
63 ATGCTAATTTCGTGCCCCAAATGAGACAAGCATGGATTCTAGTAAGGATCTTCATTCATTTCATG
198275 ATT
128 ATT
198278 TAGTTTTGCA
Statistics
Matches: 1800, Mismatches: 181, Indels: 81
0.87 0.09 0.04
Matches are distributed among these distances:
938 16 0.01
939 124 0.07
940 277 0.15
941 349 0.19
942 3 0.00
943 1 0.00
944 1 0.00
945 1 0.00
946 4 0.00
947 526 0.29
948 379 0.21
949 119 0.07
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.36
Consensus pattern (948 bp):
AGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAACTTTCTTCCCACCAATTTTTGTAAATG
CTAATTTCGTGCCCCAAATGAGACAAGCATGGATTCTAGTAAGGATCTTCATTCATTTCATGATT
AGGCACTATAAACACATTCTCTTCATCAGGATAAATGATATTGATGGTTTTCTTTTGCATGAAAA
TCTTTTCTTTGCCTTATTTTCCTTAAAATCAATGTTTGTACTTTAAATGAGACAAGCATTGATTC
CCGTAAAAGTCTCCATTTTTTCCAAGATTGGCAACCAAAAACACATTCTCTTCATTAGGATACAA
GACATTGATGATTTGGTGTCACAAGAGAAGCTTTCTTTCTAATATTGTTGATAAAATCGAGTTTA
TCTCCTAAATAAGGCAAACATGATTACTCATACTAATCCCCATTCTTTTCAAGATTTGCCACCAT
AAACATAGTCTTCTGAAACAGATACAGGATATTGATGATTTGGTTTTGCTAGGAACACTTTTTTC
CCACAATTTTTGTAGATTCTATGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAGGATC
ATCATTCATTTCGTGATTAGGCACTATAAACACATTCTTCTCATCAGGATGCATGATATTGATGG
TTTTCTTTTGCTTATAAATCTTTTCTTTGCCTCACTTTCCTTAAAATTAAAGATTGTACTTTAAA
TGAGACAAGCATTGATTCTCATAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATT
CTCTTCATTAGGATATATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCAACGTT
ATTGATAAAATCAAAGTTTGTCTCTTAAATAAGGCAAACTTGAATAGTCATACTAATCCACATTC
ATTTTAGGATTAGGCACCATAAAAATAGTCTTTTCACA
Found at i:207470 original size:949 final size:948
Alignment explanation
Indices: 198534--224843 Score: 36194
Period size: 949 Copynumber: 27.6 Consensus size: 948
198524 ACATGAATAC
* * * * *
198534 TAGGCACTATAAACACATTCGCCTCATTAGGATAAATGATATTCATGGTTTTC-TTT-AACGCGA
1 TAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATG-GA
* * * * * *
198597 CAATCTTTTCTTTGCCTTATTTTCTTTAAAATCAAAGTTTGTACTTTAAATGAGACCTACATTAA
65 -AATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGA
* * * * **
198662 TTCCCGTAAAAGTCTCCATTTTTTTCAAGATTGGGAACCAAAAACACATACCCTTCATTAGGATA
129 TTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCTTTTCATTAGGATA
* * ** *
198727 CATGACATTGATGCTGTGGTGTCGCAAGAGAAG-TATTCTCCCCACCGTTATTGATAGAATCAAA
194 CATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTATTGATAGAATCAAA
* * * *
198791 GTTGTCCCTGAAATATGACTAATATGAATACTCATACTAATCCCCATTCCTTTCCA-GATTAGGC
259 GTTGTCTCTTAAATAAGA-AAATATGAATACTCATACTAATCCCCATTCCTTT-CAGGATTAGGC
* * * * * *
198855 ACCATAAACATAATCTTCGCATAAGGATATATGATCTTGGTGTTTTGGTTTCGCAGGATACCCTT
322 ACCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCGCAGGATACGCTT
*
198920 TCTT-CCCACCAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAGACAAACATGGATTCTTGT
387 TCTTCCCCA-CAATTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGACAAACATGGATTCTTGT
* * * * * ** ***
198984 AGGGATCTTCATTCATTTCATGATTAGGCACAATAAACACATTCTTCTCCTCAACACGCATGATA
451 AGGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATA
* * * *
199049 TTGATGGTTTTCTTTTGCGTGGAAATCTTTTCTTTG-CCTCACTTTCCTTAAAATCAAAGTTTGT
516 TTTATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCAT-ATTTTCCTTAAAATCAAAGTTTGT
* * * * * *
199113 ATTTTAAATTAGACATGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCTAGATTGGAAACCAAA
580 ACTTTAAATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAA
* * *
199178 AACACATTC-TCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCACAAGAGAGGCTTTTCTT
645 AACACATTCAT-TTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTT
* * * * * * * * * * * *
199242 TCCAACGTAATCGAGAAAATCAAAATTTGTCTGTTAAATAAGACAAGGT-GGAATGCTCATGCTA
709 TCCACCATTATTGATAGAATC-AAAGTTGTCTCTTAAATAAGACAA-ATATGAATACTCATACTA
* * ** * *
199306 AT-CCCATTCTTTTAAGGATTAGGCACCATAAACA-ATGTCTTCGAATAAGGATAAATGATATTG
772 ATCCCCATTC-CTTCAGGATTAGGCACCATAAACATA-GTCTTCTCATAAGGATACATGATCTTG
* * * * * * * ** *
199369 ATGCTTTGGTTTCGCAAGAAACACTTTCTTCCCACCAATTTTTGTAAATTCA-AATTTCGTACCC
835 ATGCTTTGGTTTCGCAGGATACGCTTTCTTCCCACCAATTTTTGTAAAGT-ATGAGTTCATTGCT
** * * ** * *
199433 CAAATGAGACAAGTATGGATTCTAGCAAAGATCTTCATTCATTTCATAAT
899 CAAATGAGACAAACATGGATTCTTGTAGGGATCTTCATTCATTTCGTGAT
* * * * *
199483 TAGGCACTATAAACACATTCTTCTCATTAGGATAAATGATATTGATGGTTTTCTTTTACGTGGAA
1 TAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATGGAA
* * * * * *
199548 ATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAATTTGTACTTTAAATGATACATGCGTTGGTT
66 ATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATT
* * * *
199613 CTCGCAAAAGTCTCCATTCTTTCCATGGTTGGGAACCAAAAACACATTCTATTCATTAGGATACA
131 CTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCTTTTCATTAGGATACA
* * * *
199678 TGACTTTGAAGCTTTGGTGAT-GCAAGAGAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAG
196 TGACATTGATGCTTTGGTG-TCGCAAGAGAAGCTTTTCTTTCCACCATTATTGATAGAATCAAAG
* * *
199742 TTGTCTCTTAAATAAGGCAAAA-ATGAATACTAACACTGATCCCCATTCCTTTCAGGATTAGGCA
260 TTGTCTCTTAAATAA-G-AAAATATGAATACTCATACTAATCCCCATTCCTTTCAGGATTAGGCA
* * *
199806 CCATAAACATAGTCTTCTCATAAGGATACATGATTTTGATGCTTTAGTTTCGCTGGATACGCTTT
323 CCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCGCAGGATACGCTTT
* *
199871 CTTCCCCACAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAGACAAACATGGATTCTTCTAG
388 CTTCCCCACAATTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGACAAACATGGATTCTTGTAG
* * * * * *
199936 AGATCTTTATCCATTTTGTGATTAGGCACTATAAACATATTCTCCTCTTTAGGATACATGATATT
453 GGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATT
* * *
200001 TATGGTTTTCTTTTGCGTGGAAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTTGTACT
518 TATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACT
* *
200066 TTAAATGAGACATGCGTTGATTCTCGCAAAAGTCTCCATTCCTTTCAAGATTGGGAACCAAAAAC
583 TTAAATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAAC
* * * *
200131 ACGTTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAGAAGGTTTTCTTTCCA
648 ACATTCATTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCA
* *
200196 CCATTATTGATAGAATCAAAGTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCT
713 CCATTATTGATAGAATCAAAGTTGTCTCTTAAATAAGACAAATATGAATACTCATACTAATCCCC
* * * * *
200261 ATTCTTTTCAGGATTAGGCACCATAAACGTAGCCTTCGCATAAGGATACATGATCTTCATGCTTT
778 ATTC-CTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTT
* * *
200326 GGTTTCACATGATACGCTTTCTTCCCACCAATTTTTGTAAGGTATGAGTTCATTGCTCAAATGAG
842 GGTTTCGCAGGATACGCTTTCTTCCCACCAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAG
* * *
200391 ACGAACTTGGATTCTTGTAGGGATCTTCATTCATTTCATGAT
907 ACAAACATGGATTCTTGTAGGGATCTTCATTCATTTCGTGAT
* * * *
200433 TAGGCAATATAAGCACATTATCCTCTTTAGGATAAATGATACTTATGGTTTTCTTTTGCATGGAA
1 TAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATGGAA
200498 ATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATT
66 ATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATT
* * * * * *
200563 CTTGCAAAAGTCTCCATTCTTTTCAA-ATTTGGGAACCAAAGAGACATTCCTTTCACTAGGACAC
131 CTCGCAAAAGTCTCCATTCTTTTCAAGA-TTGGGAACCAAAAACACATTCTTTTCATTAGGATAC
* *
200627 ATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATTGAATCAAAG
195 ATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTATTGATAGAATCAAAG
* * *
200692 TTGTCTCTTAACTAATGCAAAA-CTGAATACTCATACTAATCCCCATTCCTTTTAGGATTAGGCA
260 TTGTCTCTTAAATAA-G-AAAATATGAATACTCATACTAATCCCCATTCCTTTCAGGATTAGGCA
200756 CCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCGCAGGATACGCTTT
323 CCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCGCAGGATACGCTTT
* * *
200821 TTTCCCCACAATTTTTGAAAAGTATGAGTTCATTGCTCAAATGAGACAAACATGGATTCTTGTAG
388 CTTCCCCACAATTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGACAAACATGGATTCTTGTAG
* * * *
200886 GGATCTTCATTCATTTCGTGAGTAAGCACTATAAACACATTCTCATCTTTAGGATAAATGATAAT
453 GGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATT
* *
200951 TATGGTTTTCTTTTGCTTGGAAATCTTTTCTTTAG-CATTTTTTCCTTAAAATCAAAGTTTGTAC
518 TATGGTTTTCTTTTGCATGGAAATCTTTTCTTT-GTCATATTTTCCTTAAAATCAAAGTTTGTAC
*
201015 TTTAAATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGGTTGGGAACCAAAAA
582 TTTAAATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAA
* * * *
201080 CACATTCCTTTCACTAGGACACATGACATTGATGCTTTGGTGTCGTAAGAGAAGCTTTTCTTTCC
647 CACATTCATTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
* *
201145 ACCGTTATTGATAGAATCAAAGTTGTCTCTTAAATAAGACAAATATGAATACTCATACTAATCCA
712 ACCATTATTGATAGAATCAAAGTTGTCTCTTAAATAAGACAAATATGAATACTCATACTAATCCC
201210 CATTCCTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTT
777 CATTCCTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTT
* ** * * * *
201275 GGTTTCTCAAAATACGCTTTTTTCCCACCAATTTTTGTAAACTACGAGTTTATTGCTCAAATGAG
842 GGTTTCGCAGGATACGCTTTCTTCCCACCAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAG
201340 ACAAACATGGATTCTTGTAGGGATCTTCATTCATTTCGTGAT
907 ACAAACATGGATTCTTGTAGGGATCTTCATTCATTTCGTGAT
* *
201382 TAGGCACTATAAATACATTTTCCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATGGAA
1 TAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATGGAA
* * * *
201447 ATCTTTTCTTTGTCTTATTTTCCTCAAAATCAAATTTTGTACTTTAAATAAGACATGCATTGATT
66 ATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATT
** * **
201512 CTCATAAAAGTCTCCATTCTTTTCAACATTGGGAATTAAAAACACATTCCTTTT-ATTAGGATAC
131 CTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATT-CTTTTCATTAGGATAC
* * * *** * *
201576 AAGACATTGATGTTTTAGTGGAACAATAGAAGCTTTTCTTTCCACTATTATTGATAGAATCAAAG
195 ATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTATTGATAGAATCAAAG
* * ** * * *
201641 TTTCTCTCTTAAATAAGACAAACATGAATACTCATACTAATCTACATTCTTTTCTGGATTAGCCA
260 -TTGTCTCTTAAATAAGA-AAATATGAATACTCATACTAATCCCCATTCCTTTCAGGATTAGGCA
* * * * * * *
201706 CCATAAATAAAGTCTTCTAATAAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAACACTTT
323 CCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCGCAGGATACGCTTT
* * * * ** * * *
201771 CTT-CCCACCAATTTTTGTAAATTCTAATTTC-GAGCCCCAAATGAGACAAGCATGGATTCTAGT
388 CTTCCCCA-CAATTTTTGTAAAGTATGAGTTCTTTG-CTCAAATGAGACAAACATGGATTCTTGT
* * * * * *
201834 AAGGATCTTCATCCATTTCATGATTAAGCACTATAAACACATTCTACTCATTAGGATAAATGATA
451 AGGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATA
* * ** * * * *
201899 TTCATGGTTTTCTTTAGTGTGGCAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGCTTGTA
516 TTTATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTA
* * ** * *
201964 CTTTAAATGAGACCTGCATTGATTCCCATAAAAGTCTCCATTTTTTTCAAGATTGCGAACCAAAA
581 CTTTAAATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAA
* * ** * * *
202029 TCACATACCCTTCATTAGGATACATGACATTGATGCTGTGGTGTCGCAAGAGAAGCTGTTC-TCC
646 ACACATTCATTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTC
* * * *
202093 GCACCATTATTGATAGAATCAAAGTTGACCCTAAAATAAGGCAAATATGAATACTCATACTAATC
711 -CACCATTATTGATAGAATCAAAGTTGTCTCTTAAATAAGACAAATATGAATACTCATACTAATC
* * * * * * * *
202158 CCCATTCCTTTCAAGATTAGGCACCATAAACAAAATTTGTCTCTTAAATAGGACAAAGAGGAATA
775 CCCATTCC-TTCAGGATTAGGCACCATAAACATAGTCT-TCTC--ATA-AGG--ATACATG-AT-
* * * * * * ** * * * * *
202223 CTCACACTAATCCCATT-CTTT-TCAGGATTAGGC-ACCAT--AAACAATGTCTTCTAATAAGGA
831 CT-----TGAT-GCTTTGGTTTCGCAGGA-TACGCTTTCTTCCCACCAAT-T-TT-T-GTAAAG-
* * **** * * ** *** * *
202283 TAAATGATATTGA-TGCTTTGGTTTCGCGAGAAACACT---TTCTTCCCACCAATTTTTGTAAAT
884 T--ATGA-GTTCATTGC--TCAAAT-GAGACAAACA-TGGATTCTT-GTAGGGA--TCT-T-CAT
*
202344 TCAAATGTCGTGCCCCAAAT
937 TC--ATTTCGTG------AT
* * * * * * * ** **
202364 GACACAAGCATGGATTCTAGTAAAGATC-TTCAT--TCATTTCATGAT-TAGGCCCTATAGA-CA
1 -----TAG---GCA--CTA-TAAACA-CATTC-TCCTC-TTT-AGGATAAATG--ATATTTATGG
** * * ** * ** * * * ****
202424 CATTCTTTT-CATTAGGATAAATGATATTGATGGTTTTCTTTTGCGTGAAAATCTTTTCTTTGCC
49 TTTTCTTTTGCA-T-GG--AAAT-CTTTTCTTTGTCATATTTT-CCTTAAAATC-AAAGTTTG--
** * * * * * *
202488 TTA-TTTACCTTA-AAAT-CAAAGTTTGTACTTTAAATGAGACATAGTTGATTCTCGCAAAAGTC
105 -TACTTTAAATGAGACATGC--A--TTG-A--TT--CT-CG-CA-A---AAGTCTC-C---A-T-
* * **** *
202550 TCCACTCTTTTCAAGATTGGGAACCAAAAACACATTCCTTTCATTAGGATACATGACATTGATGC
148 T-C-TTTTCAAG---ATTGGGAACCAAAAACACATTCTTTTCATTAGGATACATGACATTGATGC
* * *
202615 TTTGGTGCCGCAAGAGAAGCTTTTCTTTCCATCGTTATTGATAGAATCAAAGTTGTCTCTTAAAT
208 TTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTATTGATAGAATCAAAGTTGTCTCTTAAAT
* *
202680 AAGACAAACATGAATACTCATACTAATCCCCATT-CTTTCCAGGATTAGGCACCATAAACATAGC
273 AAGA-AAATATGAATACTCATACTAATCCCCATTCCTTT-CAGGATTAGGCACCATAAACATAGT
* * *
202744 CATCTCATAAGGATACATGATCTTGATGCTTTGGTTTCACAGGATACGCTTTCTT-CCCACCAAG
336 CTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCGCAGGATACGCTTTCTTCCCCA-CAAT
* *
202808 TTTTGTAAGGTATGAGTTCATTGCTCAAATGAGACAAACATGGATTCTTGTAGGGATCTTCATTC
400 TTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGACAAACATGGATTCTTGTAGGGATCTTCATTC
* * * *
202873 ATTTCGTGATTAGGTACTATAAACACATTTTCCTTTTTAGGATAAATGATATTTATGGTTTTCTG
465 ATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTTATGGTTTTCTT
*
202938 TTGCATGGAAATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTCTAAATGAGACA
530 TTGCATGGAAATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACA
* * * *
203003 TGCGTTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTTGGAACCAAAAAAACATTCTTTTCA
595 TGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCATTTCA
* * *
203068 TTAGGATACATGACATGGATGCTTTGGTGCCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATA
660 TTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTATTGATA
* *
203133 GAATCAAAGTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGG
725 GAATCAAAGTTGTCTCTTAAATAAGACAAATATGAATACTCATACTAATCCCCATTC-CTTCAGG
* *
203198 ATTAGGCACCATAAACATAGCCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCACAGGA
789 ATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCGCAGGA
*
203263 TACGCTTTCTTCCCACCAATTTTTGTAAGGTATGAGTTCATTGCTCAAATGAGACAAACATGGAT
854 TACGCTTTCTTCCCACCAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAGACAAACATGGAT
*
203328 TCTTGCAGGGATCTTCATTCATTTCGTGAT
919 TCTTGTAGGGATCTTCATTCATTTCGTGAT
* * * *
203358 TAGGTACTATAAACACATTCTCCTTTTTAGAATAAATGATATTTATGGTTTTCTTTTGCATGGGA
1 TAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATGGAA
* * * * * *
203423 AGCTTTTCTTTTTCATATTTTCCTTAAAATGAAAGTTTATACTCTAAATGAGACATGCGTTGATT
66 ATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATT
* * *
203488 CTCGCAAAAGTCTCCATTCTTTTCAAGATTTGGAACCAAAAAAACATTCTTTTCAGTAGGATACA
131 CTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCTTTTCATTAGGATACA
* *
203553 TGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTACTGATAGAACCAAAGT
196 TGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTATTGATAGAATCAAAGT
* * * *
203618 TGTCTCTTAAATACGGAAAAAATGAATGCTCATACTAATCCCCATTCCTTTCATGATTAGGCACC
261 TGTCTCTTAAATA-AGAAAATATGAATACTCATACTAATCCCCATTCCTTTCAGGATTAGGCACC
*
203683 ATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCGCAGGATACGCTTTTT
325 ATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCGCAGGATACGCTTTCT
* *
203748 TCCCCACCATTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGACAAACATGGATTCTTGTACGG
390 TCCCCACAATTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGACAAACATGGATTCTTGTAGGG
* * * *
203813 ATCTTCATTCATTTCGTGATTAGGTATTATAAACACATTCTCCTTTTTCGGATAAATGATATTTA
455 ATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTTA
* *
203878 TGGTTTTCTTTTGCATGGAAATCTTTTCTTTATCATATTTTCCTTAAAATCAAAGTTTGTATTTT
520 TGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTTT
* *
203943 AAATGAGGCATGCGTTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACAC
585 AAATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACAC
* *
204008 ATTAATTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCTACC
650 ATTCATTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACC
* * * * *
204073 ATTACTGATAGAACCAAAGTTGTCTCTTAAATACGGA-AAAAATGAATGCTCATACTAATCCCCA
715 ATTATTGATAGAATCAAAGTTGTCTCTTAAATA-AGACAAATATGAATACTCATACTAATCCCCA
* * * * * * *
204137 TTCCTTTCAAGATTAGGCACCATAAACATAATCTTCTTATAAGGGTATATGACCTT-AGTTCTTT
779 TTCC-TTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATCTTGA-TGCTTT
*
204201 GGTTTCGCAGGATACGCTTTCTTCCCACCAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAA
842 GGTTTCGCAGGATACGCTTTCTTCCCACCAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAG
** *
204266 ACAAACATGGATTCTTACAGAGATCTTCATTCATTTCGTGAT
907 ACAAACATGGATTCTTGTAGGGATCTTCATTCATTTCGTGAT
* * * * ** *** * *
204308 TAGGCGCAATAAACACATTATTCTCCTCAAGG-CGCATGATA--T-T-G-ATTCTTTTGCGT-GA
1 TAGGCACTATAAACACATTCTCCT-CTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATGGA
* * * * *
204366 AATCTTTTCTTTG-CCTCACTTTCCTTAAAATCAAAGTTTGTATTTTAAATTAGGCATGCATTGA
65 AATCTTTTCTTTGTCAT-ATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGA
* * * * * *
204430 TTCTCGTAAAAGTCTCCATTCTATCCTAGATTGGAAACCAAAAACACATTCTCTTCATTAGGATA
129 TTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCTTTTCATTAGGATA
* * * * * *
204495 CATGACATTGATGCTTTGGTGTCGCAAGAGAGGCTTTTCTTTCCAACGTAATCGATAAAATCAAA
194 CATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTATTGATAGAATC-AA
* * * * * * *
204560 ATTTGTCTCCTAAATAGGACAAAGAGGAATACTCACACTAAT-CCCATTCTTTTCAGGATTAGGC
258 AGTTGTCTCTTAAATAAGA-AAATATGAATACTCATACTAATCCCCATTCCTTTCAGGATTAGGC
* * * * *
204624 ACCATAAACA-ATGTCTTCTAATAAGGATAAATGATATTGATGCTTTGGTTTCGC-GAGAAACAC
322 ACCATAAACATA-GTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCGCAG-GATACGC
* * * * * * *
204687 TTTCTT-CCCACCAATTTTTGTAAATTCA-AATTTC-GTGCCCCAAATGACACAAGCATGGATTC
385 TTTCTTCCCCA-CAATTTTTGTAAAGT-ATGAGTTCTTTG-CTCAAATGAGACAAACATGGATTC
* ** * ** *
204749 TAGTAAAGATCTTCATTCATTTCAG-GATTAGGCACTATAGACACATTCTTTTCATTAGGATAAA
447 TTGTAGGGATCTTCATTCATTTC-GTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAA
* * * * * * *
204813 TGGTATTGATGGTTTTCTTTTGCGTGAAAATCTTTTCTTTGCCTTATTTACCTTAAAATCAAAGT
511 TGATATTTATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGT
* *
204878 TTGTACTTTAAATGAGACATGCGTTGATTCTCGCAAAAGTCTCCACTCTTTTCAAGATTGGGAAC
576 TTGTACTTTAAATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAAC
* * *
204943 CAAAAACACGTTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGCCGCAAGAGAAGCTTTT
641 CAAAAACACATTCATTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTT
* *
205008 CTTTCCACCGTTATTGATAGAATCAAAGTTGTCTCTTAAATAAGACAAACATGAATACTCATACT
706 CTTTCCACCATTATTGATAGAATCAAAGTTGTCTCTTAAATAAGACAAATATGAATACTCATACT
* * *
205073 AATCCCCACTCCTTTAAAGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATCTTG
771 AATCCCCATTCC-TTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATCTTG
* * *
205138 ATGCTTTGGTTTCGCAGGATACACTTCCTTCCC-CACAATTTTTGTAAAGTATGATTTCATTGCT
835 ATGCTTTGGTTTCGCAGGATACGCTTTCTTCCCAC-CAATTTTTGTAAAGTATGAGTTCATTGCT
* * *
205202 CAAATGAGACAAACATAGATTCTTATAGGGATATTCATTCATTTCGTGAT
899 CAAATGAGACAAACATGGATTCTTGTAGGGATCTTCATTCATTTCGTGAT
* * * *
205252 TAGGCACTATAAACACATTCACCTCTTTAGGATAAATGATAGTTATGGTTTAT-TTTTCCTTGGA
1 TAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTTATGGTTT-TCTTTTGCATGGA
* *
205316 AATCTTTTCTTTATCACT-TTTTCCTTAAAATCAAAGTTTGTACTTTAAAAGAGACATGCATTGA
65 AATCTTTTCTTTGTCA-TATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGA
* * * ** *
205380 TTCTTGCAAAAGTCTCCATTCTTTTCAAGTTTGGGAACGAAAAACACATTAATTTCATTAGTATA
129 TTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCTTTTCATTAGGATA
* *
205445 CATGACATTGATGCTTTGGTGTCGCAAGAGAAACTTTTCTTTCCACCGTTATTGATAGAATCAAA
194 CATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTATTGATAGAATCAAA
* * * *
205510 GTTGTCTCTTAAATACGGAAAAAATGAA-AGCTCATACTAATCCGCATTCCTTTCATGATTAGGC
259 GTTGTCTCTTAAATA-AGAAAATATGAATA-CTCATACTAATCCCCATTCCTTTCAGGATTAGGC
*
205574 ACCATAAACATAGTCTTCTCATAGGGATACATGATCTTGATGCTTTGGTTTCGCAGGATACGCTT
322 ACCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCGCAGGATACGCTT
* *
205639 TTTTCCCCACCATTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGACAAACATGGATTCTTGTA
387 TCTTCCCCACAATTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGACAAACATGGATTCTTGTA
* *
205704 GGGATCTTCATTCATTTCGTGATTAGGTACTATAAACACATT-TCCCTCTTTAGGATAAACGATA
452 GGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCT-CCTCTTTAGGATAAATGATA
* *
205768 TTTATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCATAAAATCAAAATTTGTA
516 TTTATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTA
* *
205833 CTCTAAATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTTGGAACCAAAA
581 CTTTAAATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAA
* * *
205898 AAACATTC-TTTACATTAGGATACATGAGATTGATGCTTTGGCGTCGCAAGAGAAGCTTTTCTTT
646 ACACATTCATTT-CATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTT
* * * * * *
205962 CCACCATTACTGCTAGAACCAAAGTTGTCTCTTAAATACGGA-AAAAATGAATGCTCATACTAAT
710 CCACCATTATTGATAGAATCAAAGTTGTCTCTTAAATA-AGACAAATATGAATACTCATACTAAT
*
206026 CCCCATTCCTTTCATGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATG
774 CCCCATTCC-TTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATG
* * * * *
206091 CTTTGGTTTCACAGGATACGCTTTTTTCCTCACC-TTTTTTGCAAAGTATGAGTTCTTTGCTCAA
838 CTTTGGTTTCGCAGGATACGCTTTCTTCC-CACCAATTTTTGTAAAGTATGAGTTCATTGCTCAA
*
206155 ATGAGATAAACATGGATTCTTGTAGGGATCTTCATTCATTTCGTGAT
902 ATGAGACAAACATGGATTCTTGTAGGGATCTTCATTCATTTCGTGAT
*
206202 TAGGTACTATAAACACATTCTCCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATGGAA
1 TAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATGGAA
206267 ATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATT
66 ATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATT
* * * *
206332 CTTGCAAAAGTCTTCATTCTTTCCAAGATTGGGAACCAAAAACACATTCATTTCATTAGGATACA
131 CTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCTTTTCATTAGGATACA
*
206397 TGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGT
196 TGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTATTGATAGAATCAAAGT
* **
206462 TGTCTCTTAAATAAAACAAATATGAATACTCATACTAATCCATATTCC-TTCAGGATTAGGCACC
261 TGTCTCTTAAATAAGA-AAATATGAATACTCATACTAATCCCCATTCCTTTCAGGATTAGGCACC
* * *
206526 ATAAACATAGTCTTCTCATAAGGATACATGATATTGATGCTTT-GTCTTCGCAGGATACGTTTTT
325 ATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGT-TTCGCAGGATACGCTTTC
*
206590 TTCCCCACAATTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGACAAACATAGATTCTTGTAGG
389 TTCCCCACAATTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGACAAACATGGATTCTTGTAGG
* * *
206655 GACCTTCATTCATTTCGTGATTAGGCACTGTAAACACATTCTCCTCTTTAGGATAAATGATAGTT
454 GATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTT
* *
206720 ATGGTTTTCTTTTGCTTGGAAATCTTTTCTTTATCACT-TTTTCCTTAAAATCAAAGTTTGTACT
519 ATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCA-TATTTTCCTTAAAATCAAAGTTTGTACT
* * *
206784 TTAAATGAGACATGCATTGATTCTTGCAAAAGTCTCCATTCTTTCCAAGATCGGGAACCAAAAAC
583 TTAAATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAAC
* *
206849 ACATTCATTTCATTAGGATACATGACATTGATGCTTTGGTGTTGCAAGAGAAACTTTTCTTTCCA
648 ACATTCATTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCA
* * * *
206914 CCGTTATTGATAGAATCAAAGCTGTCTCTTAAATAAGGCAAATATGAATACTCATACTAATCCAC
713 CCATTATTGATAGAATCAAAGTTGTCTCTTAAATAAGACAAATATGAATACTCATACTAATCCCC
* *
206979 ATTCCTTCAGGATTAGGCACCATATACATAGTCTTCTCAGAAGGATACATGATCTTGATGCTTTG
778 ATTCCTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTG
* * *
207044 GTTTCACAGGATACGCTTTCTTCCCACCAATTTTTGTAAGGTATGAGTTCATTGCTCAAATAAGA
843 GTTTCGCAGGATACGCTTTCTTCCCACCAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAGA
*
207109 CAAACATGGACTCTTGTAGGGATCTTCATTCATTTCGTGAT
908 CAAACATGGATTCTTGTAGGGATCTTCATTCATTTCGTGAT
** *
207150 TAGATACTATAAACACATTCTCCTTTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATGGAA
1 TAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATGGAA
* * **
207215 ATCTTTTCTTTGTCATATTTTCCTTCAAATCAAAGTTTGTACTCTAAATGAGACATGCGCTGATT
66 ATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATT
* *
207280 CTCGCAAAAGTCTCCATTCTTTTCAAGATTTGGAACCAAAAAAACATTCTTTTCATTAGGATACA
131 CTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCTTTTCATTAGGATACA
* *
207345 TGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTACTGATAGAACCAAAGT
196 TGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTATTGATAGAATCAAAGT
* * *
207410 TGTCTCTTAAATACAGAAACA-ATGAATGCTCATACTAATCCCCGTTCCTTTCATGATTAGGCAC
261 TGTCTCTTAAATA-AGAAA-ATATGAATACTCATACTAATCCCCATTCCTTTCAGGATTAGGCAC
*
207474 CATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCGCAGGATACGCTTTT
324 CATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCGCAGGATACGCTTTC
* * *
207539 TTCCCCACCATTTTTGTAAAGCATGAGTTCTTTGCTCAAATGAGACAAACATGGATTCTTATAGG
389 TTCCCCACAATTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGACAAACATGGATTCTTGTAGG
* *
207604 GATCTTCATTCATTTCGTGATTAGGTACAATAAACACATTCTCCTCTTTAGGATAAATGATATTT
454 GATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTT
*
207669 ATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTATTT
519 ATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTT
* * * *
207734 TAAATGAGGCATTCGTTGATTCTCGCAAAAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAACA
584 TAAATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACA
* *
207799 CATTAATTTTATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCAC
649 CATTCATTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCAC
* * * * **
207864 CATTACTGATAGAACCAAAGTTGTCTCTTAAATACGGA-AAAAATGAATGGTCATACTAATCCCC
714 CATTATTGATAGAATCAAAGTTGTCTCTTAAATA-AGACAAATATGAATACTCATACTAATCCCC
* * * * * *
207928 ATTCCTTTCAAGATTAGGCACCATAAACATAATCTTCTCATAAGGATATATGACCTTGGTTCTTT
778 ATTCC-TTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTT
*
207993 GGTTTCGCAGGATACGCTTTCTTCCCACCAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAA
842 GGTTTCGCAGGATACGCTTTCTTCCCACCAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAG
** * *
208058 ACAAACATGGATTCTTACAGAGATCTTCATTCATTTCGGGAT
907 ACAAACATGGATTCTTGTAGGGATCTTCATTCATTTCGTGAT
* * * * * * * *** * *
208100 TAGGCGCAATAAACACATTATTCTCCTCAAGACGCATGATATTGATGGTTTTCTTTTGCGT-GAA
1 TAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATGGAA
* * * * * *
208164 ATCTTTTCTTTGAC-TCACTTTCGTTAAAATCAAAGTTTGTATTTTAAATTAGGCATGCATTGAT
66 ATCTTTTCTTTGTCAT-ATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGAT
* * * * * *
208228 TCTCGTAAAAGTCTCCATCCTTTCCTAGATTGGAAACCAAAAACACATTCTCTTCATTAGGATAC
130 TCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCTTTTCATTAGGATAC
* * *
208293 ATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTACTGATAGAACCAAAG
195 ATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTATTGATAGAATCAAAG
* * * * *
208358 TTGTCTTTTAAATACGGAAAAAATGAATGCTCATACTAATCCCCATTCCTTTCATGATTAGGCAC
260 TTGTCTCTTAAATA-AGAAAATATGAATACTCATACTAATCCCCATTCCTTTCAGGATTAGGCAC
* * *
208423 CAAAAACATAGTCTTCTCATAAGTATACATGATCTTGATGCTTTGGTTTCGCAGGATACGCTTTT
324 CATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCGCAGGATACGCTTTC
*
208488 TTCCCCACCATTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGACAAACATGGATTCTTGTAGG
389 TTCCCCACAATTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGACAAACATGGATTCTTGTAGG
* *
208553 GATCTTCATTCATTTCGTGATTAGGTACTATAAACACATT-TCCCTCTTTAGGATAAACGATATT
454 GATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCT-CCTCTTTAGGATAAATGATATT
* *
208617 TATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCATAAAATCAAAATTTGTACT
518 TATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACT
* * *
208682 CTAAATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTTGGAACCAAAAAA
583 TTAAATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAAC
208747 ACATTC-TCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
648 ACATTCAT-TTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
* * * * *
208811 ACCATTACT-ACTAGAACCAAAGTTGTCTCTTAAATATGGA-AAAAATGAATGCTCATACTAATC
712 ACCATTATTGA-TAGAATCAAAGTTGTCTCTTAAATA-AGACAAATATGAATACTCATACTAATC
*
208874 CCCATTCCTTTCATGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGC
775 CCCATTCC-TTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGC
* * * * *
208939 TTTGGTTTCACAGGATATGCTTTTTTCCTCACC-TTTTTTGTAAAGTATGAGTTCTTTGCTCAAA
839 TTTGGTTTCGCAGGATACGCTTTCTTCC-CACCAATTTTTGTAAAGTATGAGTTCATTGCTCAAA
*
209003 TGAGATAAACATGGATTCTTGTAGGGATCTTCATTCATTTCGTGAT
903 TGAGACAAACATGGATTCTTGTAGGGATCTTCATTCATTTCGTGAT
* *
209049 TAGGTACTGTAAACACATTCTCCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATGGAA
1 TAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATGGAA
* *
209114 ATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTCTAAATGAGACATGCGTTGATT
66 ATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATT
* *
209179 CTCGCAAAAGTCTCCATTCTTTTGAAGATTGGGAACCAAAAAAACATTCTTTTCATTAGGATACA
131 CTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCTTTTCATTAGGATACA
*
209244 TGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGT
196 TGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTATTGATAGAATCAAAGT
* **
209309 TGTCTCTTAAATAAAACAAATATGAATACTCATACTAATCCATATTCC-TTCAGGATTAGGCACC
261 TGTCTCTTAAATAAGA-AAATATGAATACTCATACTAATCCCCATTCCTTTCAGGATTAGGCACC
* * *
209373 ATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGCTTCGCAGGATACGTTTTTT
325 ATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCGCAGGATACGCTTTCT
*
209438 TCCCCACAATTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGACAAACATAGATTCTTGTAGGG
390 TCCCCACAATTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGACAAACATGGATTCTTGTAGGG
* * *
209503 ACCTTCATTCATTTCATGATTAGGCACTGTAAACACATTCTCCTCTTTAGGATAAATGATATTTA
455 ATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTTA
209568 TGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTTT
520 TGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTTT
* * *
209633 AAATGAGACATGCGTTGATTCTCGCAAAAGTCTCCATTCTTTTCAATATTGGTAACCAAAAACAC
585 AAATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACAC
209698 ATTCATTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACC
650 ATTCATTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACC
* *
209763 ATTATTGATAGAATCAAAGTTGTCTCTTAAATAAGATAAATATGAATACTCATACTAATCCACAT
715 ATTATTGATAGAATCAAAGTTGTCTCTTAAATAAGACAAATATGAATACTCATACTAATCCCCAT
*
209828 TCCTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGC
780 TCCTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGT
* * *
209893 TTCGCAGGATACGTTTTTTTTCCC-CACAATTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGA
845 TTCGCAGGATACG-CTTTCTTCCCAC-CAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAGA
* *
209957 CAAACATAGATTCTTGTAGGGACCTTCATTCATTTCGTGAT
908 CAAACATGGATTCTTGTAGGGATCTTCATTCATTTCGTGAT
209998 TAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATGGAA
1 TAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATGGAA
* * * *
210063 ATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTATTTTAAATGAGGCATTCGTTGATT
66 ATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATT
* *
210128 CTCGCAAAAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAACACATTAATTTT-ATTAGGATAC
131 CTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATT-CTTTTCATTAGGATAC
* *
210192 ATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTACTGATAGAACCAAAG
195 ATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTATTGATAGAATCAAAG
* * ** * *
210257 TTGTCTCTTAAATACGGAAAAAATGAATGGTCATACTAATCCCCATTCCTTTAAAGATTAGGCAC
260 TTGTCTCTTAAATA-AGAAAATATGAATACTCATACTAATCCCCATTCCTTTCAGGATTAGGCAC
* * * * *
210322 CATAAACATAATCTTCTCATAAGGATATATGACCTTGGTTCTTTGGTTTCGCAGGATACGCTTTC
324 CATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCGCAGGATACGCTTTC
* * **
210387 TT-CCCACCAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAAACAAACATGGATTCTTACAG
389 TTCCCCA-CAATTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGACAAACATGGATTCTTGTAG
* * * * * * * * * ***
210451 AGATCTTCATTCATTTCGGGATTAGGCGCAATAAACACATTATTCTCCTCAAGACGCATGATATT
453 GGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATT
* * * * * *
210516 GATGGTTTTCTTTTGCGT-GAAATCTTTTCTTTGAC-TCACTTTCGTTAAAATCAAAGTTTGTAT
518 TATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCAT-ATTTTCCTTAAAATCAAAGTTTGTAC
* * * * * *
210579 TTTAAATTAGGCATGCATTGATTCTCGTAAAAGTCTCCATTCTTTCCTAGATTGGAAACCAAAAA
582 TTTAAATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAA
210644 CACATTC-TCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTC
647 CACATTCAT-TTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTC
* * * * * * *
210708 CACCGTTACTGATAGAACCAAAGTTGTCTTTTAAATACGGA-AAAAATGAATGCTCATACTAATC
711 CACCATTATTGATAGAATCAAAGTTGTCTCTTAAATA-AGACAAATATGAATACTCATACTAATC
* * * *
210772 CCCATTCCTTTCATGATTAGGCACCAAAAACATATTCTTCTCATAAGTATACATGATCTTGATGC
775 CCCATTCC-TTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGC
* *
210837 TTTGGTTTCGCAGGATACGCTTTTTTCCCCACC-ATTTTTGTAAAGTATGAGTTCTTTGCTCAAA
839 TTTGGTTTCGCAGGATACGCTTTCTT-CCCACCAATTTTTGTAAAGTATGAGTTCATTGCTCAAA
210901 TGAGACAAACATGGATTCTTGTAGGGATCTTCATTCATTTCGTGAT
903 TGAGACAAACATGGATTCTTGTAGGGATCTTCATTCATTTCGTGAT
* *
210947 TAGGTACTATAAACACATT-TCCCTCTTTAGGATAAACGATATTTATGGTTTTCTTTTGCATGGA
1 TAGGCACTATAAACACATTCT-CCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATGGA
* * *
211011 AATCTTTTCTTTGTCATATTTTCCATAAAATCAAAATTTGTACTCTAAATGAGACATGCATTGAT
65 AATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGAT
* * *
211076 TCTCGCAAAAGTCTCCATTCTTTTCAAGATTTGGAACCAAAAAAACATTCTCTTCATTAGGATAC
130 TCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCTTTTCATTAGGATAC
* *
211141 ATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTACT-ACTAGAACCAAA
195 ATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTATTGA-TAGAATCAAA
* * * *
211205 GTTGTCTCTTAAATATGGAAAAAATGAATGCTCATACTAATCCCCATTCCTTTCATGATTAGGCA
259 GTTGTCTCTTAAATA-AGAAAATATGAATACTCATACTAATCCCCATTCCTTTCAGGATTAGGCA
* * *
211270 CCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCACAAGATATGCTTT
323 CCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCGCAGGATACGCTTT
* * ** *
211335 TTTCCTCACCTTTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGATAAACATGGATTCTTGTAG
388 CTTCCCCACAATTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGACAAACATGGATTCTTGTAG
* *
211400 GGATCTTCATTCATTTCGTGATTAGGTACTGTAAACACATTCTCCTCTTTAGGATAAATGATATT
453 GGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATT
211465 TATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACT
518 TATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACT
* * * *
211530 CTAAATGAGACATGCGTTGATTCTCGCAAAAGTCTCCATTCTTTTGAAGATTGGGAACCAAAAAA
583 TTAAATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAAC
* *
211595 ACATTCTTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAGGAGAAGCTTTTCTTTCCA
648 ACATTCATTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCA
* * * **
211660 CCGTTATTGATAGAATCAAAGTTGTCTCTTAAGTAAAACAAATATGAATACTCATACTAATCCAT
713 CCATTATTGATAGAATCAAAGTTGTCTCTTAAATAAGACAAATATGAATACTCATACTAATCCCC
211725 ATTCCTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTG
778 ATTCCTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTG
* * * *
211790 GCTTCGCAGGATACGTTTTTTTCCC-CACAATTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAG
843 GTTTCGCAGGATACGCTTTCTTCCCAC-CAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAG
* * *
211854 ACAAACATAGATTCTTGTAGGGACCTTCATTCATTTCATGAT
907 ACAAACATGGATTCTTGTAGGGATCTTCATTCATTTCGTGAT
*
211896 TAGGCACTGTAAACACATTCTCCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATGGAA
1 TAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATGGAA
*
211961 ATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCGTTGATT
66 ATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATT
* * *
212026 CTCGCAAAAGTCTCCATTCTTTTCAATATTGGTAACCAAAAACACATTCATTTCATTAGGATACA
131 CTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCTTTTCATTAGGATACA
212091 TGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTATTGATAGAATCAAAGT
196 TGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTATTGATAGAATCAAAGT
*
212156 TGTCTCTTAAATAAGATAAATATGAATACTCATACTAATCCACATTCC-TTCAGGATTAGGCACC
261 TGTCTCTTAAATAAGA-AAATATGAATACTCATACTAATCCCCATTCCTTTCAGGATTAGGCACC
* * *
212220 ATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGCTTCGCAGGATACGTTTTTT
325 ATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCGCAGGATACG-CTTTC
*
212285 TTCCCCACAATTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGACAAACATAGATTCTTGTAGG
389 TTCCCCACAATTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGACAAACATGGATTCTTGTAGG
*
212350 GACCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTT
454 GATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTT
*
212415 ATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTATTT
519 ATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTT
* * * *
212480 TAAATGAGGCATTCGTTGATTCTCGCAAAAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAACA
584 TAAATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACA
* *
212545 CATTAATTTTATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCAC
649 CATTCATTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCAC
* * * * **
212610 CATTACTGATAGAACCAAAGTTGTCTCTTAAATACGGA-AAAAATGAATGGTCATACTAATCCCC
714 CATTATTGATAGAATCAAAGTTGTCTCTTAAATA-AGACAAATATGAATACTCATACTAATCCCC
* * * * * *
212674 ATTCCTTCCAAGATTAGGCACCATAAACATAATCTTCTCATAAGGATATATGACCTTGGTTCTTT
778 ATTCCTT-CAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTT
*
212739 GGTTTCGCAGGATACGCTTTCTTCCCACCAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAA
842 GGTTTCGCAGGATACGCTTTCTTCCCACCAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAG
** ** *
212804 ACAAACATGGATTCTTACAAAGATCTTCATTCATTTCGGGAT
907 ACAAACATGGATTCTTGTAGGGATCTTCATTCATTTCGTGAT
* * * * * * * *** * *
212846 TAGGCGCAATAAACACATTATTCTCCTCAAGACGCATGATATTGATGGTTTTCTTTTGCGT-GAA
1 TAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATGGAA
* * * * * *
212910 ATCTTTTCTTTG-CCTCACTTTCGTTAAAATCAAAGTTTGTATTTTAAATTAGGCATGCATTGAT
66 ATCTTTTCTTTGTCAT-ATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGAT
* * * * *
212974 TCTCGTAAAAGTCTCCATTCTTTCCTAGATTGGAAACCAAAAACACATTCTCTTCATTAGGATAC
130 TCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCTTTTCATTAGGATAC
* * * *
213039 ATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCCTTCCACCGTTACTGATAGAACCAAAG
195 ATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTATTGATAGAATCAAAG
* * * * * *
213104 TTGTCTTTTAAATACGGAAAAAATGAATGCTAATACTAATCCCCATTCCTTTCATGATTAGGCAC
260 TTGTCTCTTAAATA-AGAAAATATGAATACTCATACTAATCCCCATTCCTTTCAGGATTAGGCAC
* *
213169 CATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCGCAGGATACGTTTTT
324 CATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCGCAGGATACGCTTTC
*
213234 TTCCCCACCATTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGACAAACATGGATTCTTGTAGG
389 TTCCCCACAATTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGACAAACATGGATTCTTGTAGG
* *
213299 GATCTTCATTCATTTCGTGATTAGGTACTATAAACACATT-TCCCTCTTTAGGATAAACGATATT
454 GATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCT-CCTCTTTAGGATAAATGATATT
*
213363 TATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCATAAAATCAAAGTTTGTACT
518 TATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACT
* * *
213428 CTAAATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTTGGAACCAAAAAA
583 TTAAATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAAC
*
213493 ACAATC-TCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
648 ACATTCAT-TTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
* * * *
213557 ACCGTTATTGATAGAATCAAAGTTGTCTCTTAAATAAAACAAATATGAATGCTCATACTAATCCA
712 ACCATTATTGATAGAATCAAAGTTGTCTCTTAAATAAGACAAATATGAATACTCATACTAATCCC
*
213622 TATTCCTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTT
777 CATTCCTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTT
* * * *
213687 GGCTTCGCAGGATACGTTTTTTTCCC-CACAATTTTTGTAAAGTATGAGTTCTTTGCTCAAATGA
842 GGTTTCGCAGGATACGCTTTCTTCCCAC-CAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGA
* *
213751 GACAAACATAGATTCTTGTAGGGACCTTCATTCATTTCGTGAT
906 GACAAACATGGATTCTTGTAGGGATCTTCATTCATTTCGTGAT
*
213794 TAGGCACTGTAAACACATTCTCCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATGGAA
1 TAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATGGAA
213859 ATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATT
66 ATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATT
* * *
213924 CTTGCTAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCATTTCATTAGGATACA
131 CTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCTTTTCATTAGGATACA
* * * *
213989 TGGCATTGATGCTTTGGTGTCGCAGGAGAGGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGT
196 TGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTATTGATAGAATCAAAGT
* * ** * *
214054 TGTCTCTTAAATACGAAAAAAATGAATGTTCATACTAATCCCCACTCCTTTCAAGATTAGGCACC
261 TGTCTCTTAAATAAG-AAAATATGAATACTCATACTAATCCCCATTCCTTTCAGGATTAGGCACC
* *
214119 ATAAACATAGTCTTCTCATAAGGATGCATGATCTTGATGCTTTGGTTTCGCAGGATACGCTTCCT
325 ATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCGCAGGATACGCTTTCT
* *
214184 TCCCCACAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAGACAAACATGGATTCTTATAGGG
390 TCCCCACAATTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGACAAACATGGATTCTTGTAGGG
* * *
214249 ATATTCATTCATTTCGTGATTAGGCACTGTAAACACATTCTCCTCTTTAGGATAAATGATAGTTA
455 ATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTTA
* * *
214314 TGGTTTAT-TTTTCCTTGGAAATCTTTTCTTTATCACT-TTTTCCTTAAAATCAAAGTTTGTACT
520 TGGTTT-TCTTTTGCATGGAAATCTTTTCTTTGTCA-TATTTTCCTTAAAATCAAAGTTTGTACT
* * * * *
214377 TTAAATAAGACATGCATTGATTCTTGCTAAAGTCTCCATTCTTTTCAAGTTTGGGAACCGAAAAC
583 TTAAATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAAC
*
214442 ACATTCATTTCAATAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCA
648 ACATTCATTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCA
* *
214507 CCATTATTGATAGAATCAAAGTTGTCTCTTAAATAAGATAAATATGAATACTCATACTAATCCAC
713 CCATTATTGATAGAATCAAAGTTGTCTCTTAAATAAGACAAATATGAATACTCATACTAATCCCC
214572 ATTCCTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTG
778 ATTCCTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTG
* * *
214637 GTTTCGTAGGATACGCTTTTTTCCC-CACAATTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAG
843 GTTTCGCAGGATACGCTTTCTTCCCAC-CAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAG
* * *
214701 ACAAACAAGGATTCTTGTAGGGACCTTCATTCATTTCATGAT
907 ACAAACATGGATTCTTGTAGGGATCTTCATTCATTTCGTGAT
214743 TAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATGGAA
1 TAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATGGAA
* * *
214808 ATCTTTTCTTGGTTATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCGTTGATT
66 ATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATT
*
214873 CTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCATTTCATTAGGATACA
131 CTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCTTTTCATTAGGATACA
*
214938 TGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTATTGATAGAATCAAAGT
196 TGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTATTGATAGAATCAAAGT
* * **
215003 TGTCTCTTAAATAAAACAAATATGAATGCTCATACTAATCCATATTCC-TTCAGGATTAGGCACC
261 TGTCTCTTAAATAAGA-AAATATGAATACTCATACTAATCCCCATTCCTTTCAGGATTAGGCACC
* * *
215067 ATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGCTTCGCAGGATACGTTTTTT
325 ATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCGCAGGATACGCTTTCT
*
215132 TCCCCACAATTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGACAAACATAGATTCTTGTAGGG
390 TCCCCACAATTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGACAAACATGGATTCTTGTAGGG
* *
215197 ACCTTCATTCATTTCGTGATTAGGCACTGTAAACACATTCTCCTCTTTAGGATAAATGATATTTA
455 ATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTTA
*
215262 TGGTTTTCTTTTGCATGGAAATATTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTTT
520 TGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTTT
* *
215327 AAATGAGACATGCATTGATTCTTGCTAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACAC
585 AAATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACAC
* * *
215392 ATTCATTTCATTAGGATACATAACATTGACGCTTTGGTGTCGCAAGAGAAACTTTTCTTTCCACC
650 ATTCATTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACC
* * * * * * **
215457 GTTATTGATAGAATCAAAGTTGTCCCTTAGATACGAAAAAAATGAA-AGCTCATACTAATCTGCA
715 ATTATTGATAGAATCAAAGTTGTCTCTTAAATAAGACAAATATGAATA-CTCATACTAATCCCCA
* * *
215521 TTCCTTTCATGATTAGGCACCATAAACATAGTCTTCTCATAGGGATACATGATCTTGACGCTTTG
779 TTCC-TTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTG
* *
215586 GTTTCGCAGGATACGCTTTCTTCCC-CATAATTTTTGTAAAGTATGAGTTCATTGCTCAAATAAG
843 GTTTCGCAGGATACGCTTTCTTCCCAC-CAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAG
** *
215650 ACAAACACAGATTCTTGTAGGGATCTTCATTCACTTCGTGAT
907 ACAAACATGGATTCTTGTAGGGATCTTCATTCATTTCGTGAT
* * * * *
215692 TAGGCACTTTAAACACATTCTCCTCCTTAGGATAAATGATAGTTACGGTTTTCTTTTGCTTGGAA
1 TAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATGGAA
*
215757 ATCTTTTCTTTATCACT-TTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGAT
66 ATCTTTTCTTTGTCA-TATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGAT
* * *
215821 TCTTGCAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAACACATTCATTTCATTAGGATAC
130 TCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCTTTTCATTAGGATAC
*
215886 ATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACGATTATTGATAGAATCAAAG
195 ATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTATTGATAGAATCAAAG
* **
215951 TTGTCTCTTAAATAAAACAAATATGAATACTCATACTAATCCATATTCC-TTCAGGATTAGGCAC
260 TTGTCTCTTAAATAAGA-AAATATGAATACTCATACTAATCCCCATTCCTTTCAGGATTAGGCAC
* * *
216015 CATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGCTTCGCAGGATACGTTTTT
324 CATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCGCAGGATACGCTTTC
*
216080 TTCCCCACAATTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGACAAACATAGATTCTTGTAGG
389 TTCCCCACAATTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGACAAACATGGATTCTTGTAGG
* * * *
216145 GACCTTCATTCATTTCGTTATTAGGCACTGTAAACACATTCTCCTCTTTAGGATAAATGATAGTT
454 GATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTT
* * *
216210 ATGGTTTTCTTTTGCTTAGAAATCTTTTCTTTATCACT-TTTTCCTTAAAATCAAAGTTTGTACT
519 ATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCA-TATTTTCCTTAAAATCAAAGTTTGTACT
* * *
216274 TTAAATGAGACATGCATTGATTCTTGCAAAAGTCTCCATTCTTTCCATGATTGGGAACCAAAAAC
583 TTAAATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAAC
* * *
216339 ACATTCATTTCATCAGGATACATGACATTGATGCTTTGGTGTCGCAACAGAAACTTTTCTTTCCA
648 ACATTCATTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCA
* * * *
216404 CCGTTATTGATAGAATCAAAGCTGTCTCTTAAATAAGGCAAATATGAATACTCATACTAATCCAC
713 CCATTATTGATAGAATCAAAGTTGTCTCTTAAATAAGACAAATATGAATACTCATACTAATCCCC
* *
216469 ATTCCTTCAGGATTAGGCACCATATACATAGTCTTCTCATAAGGATACAGGATCTTGATGCTTTG
778 ATTCCTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTG
* * *
216534 GTTTCACAGGATACGTTTTCTTCCCACCAATTTTTGTAAGGTATGAGTTCATTGCTCAAATGAGA
843 GTTTCGCAGGATACGCTTTCTTCCCACCAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAGA
216599 CAAACATGGATTCTTGTAGGGATCTTCATTCATTTCGTGAT
908 CAAACATGGATTCTTGTAGGGATCTTCATTCATTTCGTGAT
** *
216640 TAGATACTATAAACACATTCTCCTTTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATGGAA
1 TAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATGGAA
* *
216705 ATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTCTAAATGAGACATGCGTTGATT
66 ATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATT
* *
216770 CTCGCAAAAGTCTCCATTCTTTTCAAGATTTGGAACCAAAAAAACATTCTTTTCATTAGGATACA
131 CTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCTTTTCATTAGGATACA
* *
216835 TGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTACTGATAGAACCAAAGT
196 TGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTATTGATAGAATCAAAGT
* * * * * *
216900 TGACTCTTAAATACGAAAAAAATGAATGCTCATACTAATCCCCTTTCCTTTCATGATTAGGCACC
261 TGTCTCTTAAATAAG-AAAATATGAATACTCATACTAATCCCCATTCCTTTCAGGATTAGGCACC
* *
216965 ATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCGTAGGATACGCTTTTT
325 ATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCGCAGGATACGCTTTCT
* * * *
217030 TCCCCACCATTTTTGTAAAGCATGCGTTCTTTGCTCAAATGAGACAAACATGGATTCTTATAGGG
390 TCCCCACAATTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGACAAACATGGATTCTTGTAGGG
* *
217095 ATCTTCATTCATTTCGTGATTAGGTACAATAAACACATTCTCCTCTTTAGGATAAATGATATTTA
455 ATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTTA
* * *
217160 TGGTTTTCTTTAGCATGGAAATCTTTTCTTTGTCATATTTTCCTTAAAATCAAGGTTTGTATTTT
520 TGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTTT
* * * *
217225 AAATGAGGCATGCGTTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTTGGAACCAAAAAAAC
585 AAATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACAC
*
217290 ATTCTTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACC
650 ATTCATTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACC
* * * * **
217355 ATTACTGATAGAACCAAAGTTGTCTCTTAAATACGGA-AAAAATGAATGGTCATACTAATCCCCA
715 ATTATTGATAGAATCAAAGTTGTCTCTTAAATA-AGACAAATATGAATACTCATACTAATCCCCA
* * * * * *
217419 TTCCTTTCAAGATTAGGCACCATAAACATAATCTTCTCATAAGGATATATGACCTTGGTTCTTTG
779 TTCC-TTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTG
*
217484 GTTTCGCAGGATACGCTTTCTTCCCACCAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAAA
843 GTTTCGCAGGATACGCTTTCTTCCCACCAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAGA
** *
217549 CAAACATGGATTCTTACAGAGATCTTCATTCATTTCGTGAT
908 CAAACATGGATTCTTGTAGGGATCTTCATTCATTTCGTGAT
* * * * * * *** * *
217590 TAGGC-GTAATAAACACATTATTCTCCTCAAGACGCATGATATTGATGGTTTTCTTTTGCGT-GA
1 TAGGCACT-ATAAACACATTCTCCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATGGA
* * * * *
217653 AATCTTTTCTTTG-CCTCACTTTCCTTAAAATCAAAGTTTGTATTTTAAATTAGGCATGCATTGA
65 AATCTTTTCTTTGTCAT-ATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGA
* * * * *
217717 TTCTCGTAAAAGTCTCCATTCTTTCCTAGATTGGAAACCAAAAACACATTCTCTTCATTAGGATA
129 TTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCTTTTCATTAGGATA
* * * ** * *
217782 CATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCAACGTAATCAATAAAATTGAA
194 CATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTATTGATAGAA-TCAA
* * * * * * * *
217847 ATTTGTTTCCTAAATAGGACAAAGAGGAATACTCACACTAAT-CCCATTCTTTTCAGGATTAGGC
258 AGTTGTCTCTTAAATAAGA-AAATATGAATACTCATACTAATCCCCATTCCTTTCAGGATTAGGC
* * * * *
217911 ACCATAAACA-ATGTCTTCTAATAAGGATAAATGATATTGATGCTTTGGTTTCGC-GAGAAACAC
322 ACCATAAACATA-GTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCGCAG-GATACGC
* * * * * *
217974 TTTCTT-CCCACCAATTTTTGTAAATTCA-AATTTC-CTGCCCCAAATGAGAAAAACATGGATTC
385 TTTCTTCCCCA-CAATTTTTGTAAAGT-ATGAGTTCTTTG-CTCAAATGAGACAAACATGGATTC
* * * * * *
218036 TAGTAAGGATCTTCATCCATTTCATGATTAGGCACCATAAACACATTCTTCT-TATTAGGATAAA
447 TTGTAGGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCT-TTAGGATAAA
* * * * * * *
218100 TGATATTCATGTTTTTCTTTAGCGTGGTAATCTTTTCTTTGCCTTATTTTCCTTAAAATCAAAGT
511 TGATATTTATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGT
** * * * *
218165 TTGTACTTTAAACAAGACCTGCATTGATTCCCGTAAAAGTCTCCATTTTTTTCAAGATTGGGAAC
576 TTGTACTTTAAATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAAC
* * ** * * * *
218230 CAAAATCACATACCCTTCCTTAGGATACAAGACATTGATGCTGTGGTGTCGCAAGAGAAGCTATT
641 CAAAAACACATTCATTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTT
* *
218295 C-TACACACCATTATTGATAGAATCAAAGTTGTCCCTTAAATAAGACAAATATGAATACTCATAC
706 CTTTC-CACCATTATTGATAGAATCAAAGTTGTCTCTTAAATAAGACAAATATGAATACTCATAC
* * * *
218359 TAATCCCCATTCCTTTCAAGATTAGGCACCATAAACATAATCTTCTCATAAGGATATATGACCTT
770 TAATCCCCATTCC-TTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATCTT
* * * * *
218424 GGTACTTTGGTTTCGTAGGATACGGTTTCTTCCCACCAATTTTTGTAAAGTATGAGTTAATTGCT
834 GATGCTTTGGTTTCGCAGGATACGCTTTCTTCCCACCAATTTTTGTAAAGTATGAGTTCATTGCT
*
218489 CAAATGAGACAAACATGGATTCTTGTAGGGACCTTCATTCATTTCGTGAT
899 CAAATGAGACAAACATGGATTCTTGTAGGGATCTTCATTCATTTCGTGAT
*
218539 TAGGCACTATAAACACATTCTCCTATTTAGGATAAATGATATTTATGGTTTTCTTTTGCATGGAA
1 TAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATGGAA
* *
218604 ATCTTTTCTTTGTCTTATTTTCCTTAAAATCAAAGTTTATACTTTAAATGAGACATGCATTGATT
66 ATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATT
**
218669 CTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTAATTTCATTAGGATACA
131 CTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCTTTTCATTAGGATACA
* *
218734 TGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCTACCATTATTGATAGAATCAAAAT
196 TGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTATTGATAGAATCAAAGT
* * * *
218799 TGTCACTTAAATAAGACAAATATGAAAAATCATACTAATCCACATTCCTTTCAGGATTAGGCACC
261 TGTCTCTTAAATAAGA-AAATATGAATACTCATACTAATCCCCATTCCTTTCAGGATTAGGCACC
* * *
218864 ATCAACATAGTTTTCTCATAAGGATACATGATCTTGATGCTTTGGTCTT-GCAAGATACGCTTTC
325 ATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGT-TTCGCAGGATACGCTTTC
*
218928 TT-CCCACCAATTTTTGTAAAGTATGAGTT-TGTTGCTCAAATGAGACAAACATGGATTCTTGCA
389 TTCCCCA-CAATTTTTGTAAAGTATGAGTTCT-TTGCTCAAATGAGACAAACATGGATTCTTGTA
* *
218991 AGGATCTTTATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATAT
452 GGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATAT
* * * * * *
219056 TTATGATTTTCTTTTCCATGGAAATCTTTTCTTTGTCTTTTTTTTCTTAAAATCAAAGTTTGTAT
517 TTATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTAC
* * * * *
219121 TTTAAATGAGGCATGCGTTGATTCTCGTAAAAGTCTTCATTCTTTTCAAGATTGGCAACCAAAAA
582 TTTAAATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAA
* *
219186 CACATTAATTTCATTAGGATGCATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
647 CACATTCATTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
* * *
219251 ACCATTATTGATAGATTCAAAGTTGTCTCTTAAATAAGACAAACATGAAAACTCATACTAATCCC
712 ACCATTATTGATAGAATCAAAGTTGTCTCTTAAATAAGACAAATATGAATACTCATACTAATCCC
* * * *
219316 CATTCTTTTCGGGATTAGGCACCGTAAACATAGCCTTCTCATAAGGATACATGATCTTGATGCTT
777 CATTC-CTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTT
* * *
219381 TGGTTTCACAGGAGACGCTTTCTTCCCACCAATTTTTGTAAGGTATGAGTTCATTGCTCAAATGA
841 TGGTTTCGCAGGATACGCTTTCTTCCCACCAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGA
* *
219446 GACAAACACGGAGTT-TTGTAGGGATCTTCATTCATTTTGTGAT
906 GACAAACATGGA-TTCTTGTAGGGATCTTCATTCATTTCGTGAT
* *
219489 TAGGCACTATAAGCATATTCTCCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATGGAA
1 TAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATGGAA
* *
219554 ATCTTTTCTTTGTCATATTTTTCTTAAAATCAAAGTTTGTGCTTTAAATGAGACATGCATTGATT
66 ATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATT
* * **
219619 CTCGCAAAAGTCTCCATTTTTTTCAAGATTGGGAACCAAAAAGACATTAATTTCATTAGGATACA
131 CTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCTTTTCATTAGGATACA
* * *
219684 AGACATTGATGCTTTGGTGTCGCAAAAGAAGCTTTTCTTTCCACCATTATTGATAGATTCAAAGT
196 TGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTATTGATAGAATCAAAGT
* * *
219749 TGTCACTTAAATAAGACAAATATGAATAATCATACTAATCCACATTCCTTTCAGGATTAGGCACC
261 TGTCTCTTAAATAAGA-AAATATGAATACTCATACTAATCCCCATTCCTTTCAGGATTAGGCACC
* * * *
219814 ATCAACATTGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTTGCAAGATACGCTTTCT
325 ATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCGCAGGATACGCTTTCT
* * **
219879 T-CCCACCAATTTTGGTAAAGTATGAGTT-TATTGCTCAAATGAGACAAACATGGATTCATGCGG
390 TCCCCA-CAATTTTTGTAAAGTATGAGTTCT-TTGCTCAAATGAGACAAACATGGATTCTTGTAG
* *
219942 GGATCTTTATTCATTTCGTGATTAGGCACTATAAACACATTTTCCTCTTTAGGATAAATGATATT
453 GGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATT
* * * *
220007 TATGGTTTTCTTTTCCATGGAAATCTTTTCTTTGTCTTATTTTTCTTAAAATCAAAGTTTGTATT
518 TATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACT
* *
220072 TTAAATGACG-CATGCGTTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGTTTGGGAACCAAAAA
583 TTAAATGA-GACATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAA
*
220136 CACATTAATTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
647 CACATTCATTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
* * *
220201 ACCATTATTGATAGAATGAAAGTTGTCTCTTAAATAAGACAAACATGAAAACTCATACTAATCCC
712 ACCATTATTGATAGAATCAAAGTTGTCTCTTAAATAAGACAAATATGAATACTCATACTAATCCC
* * * *
220266 CATTCTTTTCGGGATTAGGCACCATAAACATAGCCTTCTTATAAGGATACATGATCTTGATGCTT
777 CATTC-CTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTT
* * * * *
220331 TGGTTTCACAGGAGACGGTTTTTTCCCACCAATTTTTGTAAGGTATGAGTTCATTGCTCACAA-G
841 TGGTTTCGCAGGATACGCTTTCTTCCCACCAATTTTTGTAAAGTATGAGTTCATTGCTCA-AATG
** *
220395 AGACAAACACAGATTTTTGTAGGGATCTTCATTCATTTCGTGAT
905 AGACAAACATGGATTCTTGTAGGGATCTTCATTCATTTCGTGAT
* * *
220439 TAGGCACTATAAGCATATTCTCCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATGGTA
1 TAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATGGAA
* *
220504 ATCTTTTCTTTGTCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCGTTGATT
66 ATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATT
**
220569 CTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTAATTTCATTAGGATACA
131 CTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCTTTTCATTAGGATACA
*
220634 TGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTATTGATAGAATCAAAAT
196 TGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTATTGATAGAATCAAAGT
* * *
220699 TGTCACTTAAATAAGACAAATATGAATAATCATACTAATCCACATTCCTTTCAGGATTAGGCACC
261 TGTCTCTTAAATAAGA-AAATATGAATACTCATACTAATCCCCATTCCTTTCAGGATTAGGCACC
* * * * * *
220764 ATCAACACAGTCTTCTCATAAAGATACATGATCTCGATGCTTTGGTTTTGCAAGATACGCTTTCT
325 ATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCGCAGGATACGCTTTCT
* * *
220829 T-CCCACCAATTTTTGTAAAGTATGAGTT-TATTGCTCAATTGAGACAAACATGGATTCATGCAG
390 TCCCCA-CAATTTTTGTAAAGTATGAGTTCT-TTGCTCAAATGAGACAAACATGGATTCTTGTAG
* *
220892 GGATCTTTATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATT
453 GGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATT
* * * *
220957 TATGGTTTTCTTTTCCATGGAAATCTTTTCTTTGTCTTTTTTTTCTTAAAATCAAAGTTTGTACT
518 TATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACT
* * *
221022 TTAAATAAGACATCCGTTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAAC
583 TTAAATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAAC
*
221087 ACATTAATTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCA
648 ACATTCATTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCA
* *
221152 CCATTATTGATAGAATCAAAGTTGTCTCTTCAAATAAGACAAACATGAAAACTCATACTAATCCC
713 CCATTATTGATAGAATCAAAGTTGTCTCTT-AAATAAGACAAATATGAATACTCATACTAATCCC
* * *
221217 CATTCTTTTCGGGATTAGGCACCATAAACATAGCCTTCTCATAAGGATACATGATCTTGATGCTT
777 CATTC-CTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTT
* * * *
221282 TGGTTTCACAAGAGACGCTTTCTTCCCACCAATTTTTGTAAGGTATGAGTTCATTGCTCAAATGA
841 TGGTTTCGCAGGATACGCTTTCTTCCCACCAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGA
* * *
221347 GACAAACACGAATTTTTGTAGGGATCTTCATTCATTTCGTGAT
906 GACAAACATGGATTCTTGTAGGGATCTTCATTCATTTCGTGAT
* * *
221390 TAGGCACTATAAGCATATTCTCCTCTTTAGGATAAATGATATTTATGGTTTTTTTTTGCATGGAA
1 TAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATGGAA
*
221455 ATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTGCTTTAAATGAGACATGCATTGATT
66 ATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATT
* *
221520 CTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAAAACATTCCTTTCATTAGGATACA
131 CTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCTTTTCATTAGGATACA
* * *
221585 TGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCATCGTTATTGATAGAACCAAAGT
196 TGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTATTGATAGAATCAAAGT
* * *
221650 TGTCTCTTAAATAAGGCAAAAT-TAAATACTCATACTAATCCCCATTTCTTTTAGGATTAGGCAC
261 TGTCTCTTAAATAA-G-AAAATATGAATACTCATACTAATCCCCATTCCTTTCAGGATTAGGCAC
* *
221714 CATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCACAGGAGACGCTTTC
324 CATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCGCAGGATACGCTTTC
* * * *
221779 TT-CCCACCAATTTTTGTAAGGTATGAGTTCATTGCTCAAATGAGACAAACACGGATTTTTGTAG
389 TTCCCCA-CAATTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGACAAACATGGATTCTTGTAG
* *
221843 GGATCTTCATTCATTTCGTGATTAGGCATTATAAACACATTCTCCTCTTCAGGATAAATGATATT
453 GGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATT
* * *
221908 TATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCTTATTTTCCTCAAAATCAAAGTTTCTACT
518 TATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACT
* ** * **
221973 TTAAATAAGACATGCATTGATTCTCATAAAAGTCTCCATTCTTTTCAACATTGGGAATTAAAAAC
583 TTAAATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAAC
* * * * * ***
222038 ACATTCCCTTT-TTTAGGATACAAGACATTGATGTTTTAGTGGAACAAGAGAAGCTTTTCTTTCC
648 ACATT-CATTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
* * *
222102 ACTC-TTATTGATAGAATCAAAGTT-TCTCTCTCAAATAAGACAAACACGAATACTCACACTAAT
712 AC-CATTATTGATAGAATCAAAGTTGTCTCT-T-AAATAAGACAAATATGAATACTCATACTAAT
* * * * *
222165 CCACATTCTTTTCTA-GATTAGGCACCATAAACAAAGTCTTCTAATAAGGATACATGATATTGAT
774 CCCCATTC-CTTC-AGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATCTTGAT
* * * * * * * * * *
222229 GCTTTGGTTTCACAAGAAACACTTTCTTCCCACCAATTTTTGTAAATTCTAATTTGGA--GCCCC
837 GCTTTGGTTTCGCAGGATACGCTTTCTTCCCACCAATTTTTGTAAAGTATGAGTT-CATTG-CTC
* * * * *
222292 AAATGAGA-AAAGCAAGGATTCTAGTAAGGATCTTCATCCATTTCTTGAT
900 AAATGAGACAAA-CATGGATTCTTGTAGGGATCTTCATTCATTTCGTGAT
* * *
222341 TAGGCACTATAAACACATTCTTCT-TATTAGGATAAATGATATTCT-TGGTTTTCTTTCGCGTGG
1 TAGGCACTATAAACACATTCTCCTCT-TTAGGATAAATGATATT-TATGGTTTTCTTTTGCATGG
* * * * * * *
222404 CAATTTTTTCTTTGCCTTATTTTCCTTAAAATTAAAGTTTGTACTTTAAATAAGACCTGCATTGA
64 AAATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGA
* * * * ** **
222469 TTCCCGTAAAAGTCTCCATTTTTTTCAAGATTGGGAACCAAAATCACAAACCCTTCATTAGGATA
129 TTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCTTTTCATTAGGATA
* * * * * *
222534 CAAGACATTGATGCTGTGGTGTCTCAAGTGAAGCTGTTC-TCCGCACCATTATTGATAGAATCAA
194 CATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTC-CACCATTATTGATAGAATCAA
* * * *
222598 AGTTGCCCCTTAAAGAAGACAAATATGAATACTCATACTAATCCCCATTCCTTTCAAGATTAGGC
258 AGTTGTCTCTTAAATAAGA-AAATATGAATACTCATACTAATCCCCATTCCTTTCAGGATTAGGC
* * * * ** * *
222663 ACCATAAACATAATCTTCTCATAAGGATATATGACCTTGGTATTTTGGTTTCGTAGGATATGCTT
322 ACCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCGCAGGATACGCTT
*
222728 TCTT-CCCACCAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAGACAAACATGGATTCTTGT
387 TCTTCCCCA-CAATTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGACAAACATGGATTCTTGT
* * *
222792 AGGGACCTTCATTCATTTCGTGATTAGGCACTATAAACGCATTCTCCTCTTTAGGATTAATGATA
451 AGGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATA
* **
222857 TTTATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCTTATTTTTATTAAAATCAAAGTTTGTA
516 TTTATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTA
* *
222922 CTTTAAATGAGACATGCGTTGATTCTCGCAAAAGTCTCCATTCTTTTCAGGATTGGGAACCAAAA
581 CTTTAAATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAA
* * *
222987 ACACATTAATTTCATTACGATACATGACATTGATGCTTTGGTGTCGCAAGAGACGCTTTTCTTTC
646 ACACATTCATTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTC
* * *
223052 AACCATTATTGATAGAATCAAAGTTGTCACTTAAATAAGACAAATATGAATAATCATACTAATCC
711 CACCATTATTGATAGAATCAAAGTTGTCTCTTAAATAAGACAAATATGAATACTCATACTAATCC
* *
223117 ACATTCCTTTCAAGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCT
776 CCATTCC-TTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCT
* * * * *
223182 TTGGTTTTGCAAGTTACGTTTTCTTCCCTCCAATTTTTGTAAAGTATGAGTTCATTGCTCAAATG
840 TTGGTTTCGCAGGATACGCTTTCTTCCCACCAATTTTTGTAAAGTATGAGTTCATTGCTCAAATG
* *
223247 AGACAAACATGGATTCTTGTAGGGACCTTCATTCATTTCATGAT
905 AGACAAACATGGATTCTTGTAGGGATCTTCATTCATTTCGTGAT
* * *
223291 TAGGCACTATAAACACATT-TCCCTCTTTAGGATAAACGATATTTAT-GCTTTCTTTTGCATAGA
1 TAGGCACTATAAACACATTCT-CCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATGGA
* * *
223354 AATCTTTTCTTTGTCATATTTTCC-TAAAATCAAAGTTTGTATTTTAAATGAGGCATGCGTTGAT
65 AATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGAT
**
223418 TCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTAATTTCATTAGGATAC
130 TCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCTTTTCATTAGGATAC
* *
223483 ATGACATTGATGCTTTGGTGTCGCAAAAGAAGCTTTTCTTTCCACCATTATTGATAGAATGAAAG
195 ATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTATTGATAGAATCAAAG
* * *
223548 TTGTCTCTTAAATAAGACAAACATGAAAACTCATACTAATCCCCATTCTTTTCAGGATTAGGCAC
260 TTGTCTCTTAAATAAGA-AAATATGAATACTCATACTAATCCCCATTCCTTTCAGGATTAGGCAC
* * * * *
223613 CATCAACATAGTCTTCTCATAAAGATACATGATCTCGATGCTTTGGTTTTGCAAGATACGCTTTC
324 CATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCGCAGGATACGCTTTC
* * *
223678 TT-CCCACCAATTTTTGTAAAGTATGAGTT-TATTGCTCAAATGAGGCAAACATGGATTCATGCA
389 TTCCCCA-CAATTTTTGTAAAGTATGAGTTCT-TTGCTCAAATGAGACAAACATGGATTCTTGTA
* *
223741 GGGATCTTTATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATAT
452 GGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATAT
* * * * *
223806 TTATGGTTTTCTTTTCCATGGAAATCTTTTCTTTGTCTTTTTTTTCTTAAATTCAAAGTTTGTAC
517 TTATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTAC
* *
223871 TTTAAATAAGACATGCGTTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAA
582 TTTAAATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAA
* *
223936 CACATTAATTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAAAGAAGCTTTTCTTTCC
647 CACATTCATTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCC
* *
224001 ACCATTATTGATAGAATCAAAGTTGTCTCTTAAATAAGACAAACATGAAAACTCATACTAATCCC
712 ACCATTATTGATAGAATCAAAGTTGTCTCTTAAATAAGACAAATATGAATACTCATACTAATCCC
* * *
224066 CATTCTTTTCGGGATTAGGCACCATAAACATAGCCTTCTCATAAGGATACATGATCTTGATGCTT
777 CATTC-CTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTT
* * * * *
224131 TGGTTTCACAAGAGACGCTTTCTTCCCACCAATTTTTGTAAGGTATGAGTTCATTACTCAAATGA
841 TGGTTTCGCAGGATACGCTTTCTTCCCACCAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGA
** * *
224196 GACAAACACAGATTTTTGTAGGGACCTTCATTCATTTCGTGAT
906 GACAAACATGGATTCTTGTAGGGATCTTCATTCATTTCGTGAT
* *
224239 TAGGCACTATAAACACATT-TGCCTCTTTAGGATAAACGATATTTATGGTTTTCTTTTGCATAGA
1 TAGGCACTATAAACACATTCT-CCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATGGA
* * *
224303 AATCTTTTCTTTGTCATATTTTCCTAAAAATCAAAGTTTGTACTCTAAATGAGACATGCGTTGAT
65 AATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGAT
* **
224368 TCTCGCAAAAGTGTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTAATTTCATTAGGATAC
130 TCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCTTTTCATTAGGATAC
*
224433 ATGACATTGATTCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTATTGATAGAATCAAAG
195 ATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTATTGATAGAATCAAAG
* *
224498 TTGTCTCTTAAATAAGACAAATATGAATAATCATACTAATCCACATTCCTTTCAGGATTAGGCAC
260 TTGTCTCTTAAATAAGA-AAATATGAATACTCATACTAATCCCCATTCCTTTCAGGATTAGGCAC
* * * **
224563 CATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTTGCAAGTTACATTTTC
324 CATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCGCAGGATACGCTTTC
* *
224628 TTCCCTC-CAATTTTTGTAAAGTATGAGTT-TATTGCTCAAATGAGACAAACATGGATTATTGCA
389 TTCCC-CACAATTTTTGTAAAGTATGAGTTCT-TTGCTCAAATGAGACAAACATGGATTCTTGTA
*
224691 GGGATCTTTATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATAT
452 GGGATCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATAT
* * * * *
224756 TTATTGTTTTCTTTTGCGTGGAAATCTTTTCTTTGTCTTATTTTCCTTAAAATCGAAGTTTATAC
517 TTATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTAC
224821 TTTAAATGAGACATGCATTGATT
582 TTTAAATGAGACATGCATTGATT
224844 TTTCGCAGGA
Statistics
Matches: 22689, Mismatches: 2331, Indels: 681
0.88 0.09 0.03
Matches are distributed among these distances:
943 18 0.00
944 751 0.03
945 47 0.00
946 2 0.00
947 13 0.00
948 2502 0.11
949 8671 0.38
950 7945 0.35
951 1766 0.08
952 23 0.00
953 3 0.00
954 3 0.00
955 4 0.00
956 1 0.00
957 5 0.00
958 2 0.00
959 2 0.00
960 1 0.00
961 10 0.00
962 1 0.00
963 7 0.00
964 12 0.00
965 8 0.00
966 2 0.00
967 1 0.00
968 6 0.00
969 10 0.00
970 4 0.00
971 9 0.00
972 6 0.00
973 3 0.00
974 9 0.00
975 3 0.00
976 11 0.00
977 7 0.00
978 10 0.00
979 2 0.00
981 6 0.00
982 15 0.00
983 15 0.00
984 4 0.00
986 2 0.00
987 2 0.00
989 2 0.00
990 2 0.00
992 5 0.00
993 14 0.00
994 16 0.00
995 6 0.00
997 4 0.00
998 12 0.00
999 8 0.00
1000 12 0.00
1001 3 0.00
1002 11 0.00
1003 3 0.00
1004 6 0.00
1005 9 0.00
1006 5 0.00
1007 10 0.00
1008 7 0.00
1009 1 0.00
1010 1 0.00
1011 9 0.00
1012 12 0.00
1013 9 0.00
1014 1 0.00
1015 10 0.00
1016 1 0.00
1017 2 0.00
1018 2 0.00
1019 5 0.00
1020 1 0.00
1021 4 0.00
1022 3 0.00
1023 3 0.00
1024 34 0.00
1025 827 0.04
1026 129 0.01
ACGTcount: A:0.30, C:0.18, G:0.15, T:0.36
Consensus pattern (948 bp):
TAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATGGAA
ATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATT
CTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCTTTTCATTAGGATACA
TGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTATTGATAGAATCAAAGT
TGTCTCTTAAATAAGAAAATATGAATACTCATACTAATCCCCATTCCTTTCAGGATTAGGCACCA
TAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTTTCGCAGGATACGCTTTCTT
CCCCACAATTTTTGTAAAGTATGAGTTCTTTGCTCAAATGAGACAAACATGGATTCTTGTAGGGA
TCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTTAT
GGTTTTCTTTTGCATGGAAATCTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTTTA
AATGAGACATGCATTGATTCTCGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACA
TTCATTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCA
TTATTGATAGAATCAAAGTTGTCTCTTAAATAAGACAAATATGAATACTCATACTAATCCCCATT
CCTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACATGATCTTGATGCTTTGGTT
TCGCAGGATACGCTTTCTTCCCACCAATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAGACAA
ACATGGATTCTTGTAGGGATCTTCATTCATTTCGTGAT
Found at i:221144 original size:159 final size:156
Alignment explanation
Indices: 202476--224473 Score: 852
Period size: 158 Copynumber: 139.1 Consensus size: 156
202466 GCGTGAAAAT
** *
202476 CTTTTCTTTG-CCTTATTTACCTTAAAATCAAAGTTTGTACTTTAAATGAGACAT-AGTTGATTC
1 CTTTTCTTTGTCC-TATTTTTCTTAAAATCAAAGTTTGTAC-TTAAATAAGACATCA-TTGATTC
* * *
202539 TCGCAAAAGTCTCCACTCTTTTCAAGATTGGGAACCAAAAACACATTCCTTTCATTAGGATACAT
63 TCGCAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATT-ATTTCATTAGGATACAT
*
202604 GACATTGATGCTTTGGTGCCGCAAGAGAAG
127 GACATTGATGCTTTGGTGTCGCAAGAGAAG
** * * *
202634 CTTTTC-TT-TCC-ATCGTTATTGATAGAATCAAAG-TTGTCTCTTAAATAAGACAAACA-TGAA
1 CTTTTCTTTGTCCTAT--TT-TTCTTAAAATCAAAGTTTGT-ACTTAAATAAGAC-ATCATTG-A
* ** * * * * * * * ** * *
202694 TACTCATACTAA-TCCCCATTCTTTCCAGGATTAGGCACCATAAACATAGCCATCTCATAAGGAT
60 TTCTCGCA-AAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACA-TTATTTCATTAGGAT
* * * * *
202758 ACATGATC-TTGATGCTTTGGTTTCACAGGATACG
123 ACATGA-CATTGATGCTTTGGTGTCGCAAGAGAAG
*** * * * ** * * * * * *
202792 C-TTTCTTCCCACCAAGTTTT-GTAAGGT-ATGAGTTCAT-TGCTCAAATGAGACAAACATGGAT
1 CTTTTCTT-TGTCCTATTTTTCTTAAAATCA-AAGTT--TGTACTTAAATAAGAC-ATCATTGAT
* * ** * * ** * * * **
202853 TCTTG-TAGGGATCTTCATTCATTTCGTGATTAGGTACTATAAACACATT-TTCCTTTTTAGGAT
61 TCTCGCAAAAG-TCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTATT--TCATTAGGAT
* * * * ** * * *
202916 AAATGATATTTATGGTTTTCTGTTGCATG-GAAAT
123 ACATGACATTGATGCTTTGGTGTCGCAAGAG-AAG
* * * *
202950 CTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTCTAAATGAGACATGCGTTGATTCT
1 CTTTTCTTTGTCCTATTTTTCTTAAAATCAAAGTTTGTACT-TAAATAAGACAT-CATTGATTCT
* * *
203015 CGCAAAAGTCTCCATTCTTTTCAAGATTTGGAACCAAAAAAACATTCTTTTCATTAGGATACATG
64 CGCAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATT-ATTTCATTAGGATACATG
* *
203080 ACATGGATGCTTTGGTGCCGCAAGAGAAG
128 ACATTGATGCTTTGGTGTCGCAAGAGAAG
* ** * ** * * * *
203109 CTTTTCTTT-CCACCGTTATTGATAGAATCAAAG-TTGTCTCTTAAATAAGACAAACA-TGAATA
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCAAAGTTTGT-ACTTAAATAAGAC-ATCATTG-ATT
** * * * * * * *** *
203171 CTCATACTAA-TCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGCCTTCTCATAAGGATAC
62 CTCGCA-AAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTATT-TCATTAGGATAC
* * * * *
203235 ATGATC-TTGATGCTTTGGTTTCACAGGATACG
125 ATGA-CATTGATGCTTTGGTGTCGCAAGAGAAG
*** * * ** * * * * * *
203267 C-TTTCTTCCCACCAATTTTT-GTAAGGT-ATGAGTTCAT-TGCTCAAATGAGACAAACATGGAT
1 CTTTTCTT-TGTCCTATTTTTCTTAAAATCA-AAGTT--TGTACTTAAATAAGAC-ATCATTGAT
* ** * * ** * * * * * *
203328 TCTTGC-AGGGATCTTCATTCATTTCGTGATTAGGTACTATAAACACATTCTCCTT-TTTAGAAT
61 TCTCGCAAAAG-TCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTAT--TTCATTAGGAT
* * * * ** * * * *
203391 AAATGATATTTATGGTTTTCTTTTGCATGGGAAG
123 ACATGACATTGATGCTTTGGTGTCGCAAGAGAAG
* * * * * * *
203425 CTTTTCTTTTTCATATTTTCCTTAAAATGAAAGTTTATACTCTAAATGAGACATGCGTTGATTCT
1 CTTTTCTTTGTCCTATTTTTCTTAAAATCAAAGTTTGTACT-TAAATAAGACAT-CATTGATTCT
* * * *
203490 CGCAAAAGTCTCCATTCTTTTCAAGATTTGGAACCAAAAAAACATTCTTTTCAGTAGGATACATG
64 CGCAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATT-ATTTCATTAGGATACATG
203555 ACATTGATGCTTTGGTGTCGCAAGAGAAG
128 ACATTGATGCTTTGGTGTCGCAAGAGAAG
* * ** ** * * * * ** * *
203584 CTTTTCTTT-CCACCATTACTGATAGAACCAAAG-TTGTCTCTTAAATACGGA-AAAAATGAATG
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCAAAGTTTGT-ACTTAAATA-AGACATCATTG-ATT
** * * * * * * * * * *
203646 CTCATACTAA-TCCCCATTCCTTTCATGATTAGGCACCATAAACATAGTCTTCTCATAAGGATAC
62 CTCGCA-AAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTATT-TCATTAGGATAC
* * * *
203710 ATGATC-TTGATGCTTTGGTTTCGCAGGATACG
125 ATGA-CATTGATGCTTTGGTGTCGCAAGAGAAG
*** * * * * * * * * * *
203742 CTTTT-TTCCCCACCATTTTT-GTAAAGT-ATGAGTTCTTTGCTCAAATGAGACAAACATGGATT
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCA-AAGTT-TGTACTTAAATAAGAC-ATCATTGATT
* * ** * * ** * ** * * * *
203804 CTTG-TACGGATCTTCATTCATTTCGTGATTAGGTATTATAAACACATTCTCCTT-TTTCGGATA
62 CTCGCAAAAG-TCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTAT--TTCATTAGGATA
* * * * ** * * * *
203867 AATGATATTTATGGTTTTCTTTTGCATG-GAAAT
124 CATGACATTGATGCTTTGGTGTCGCAAGAG-AAG
* * * * * * *
203900 CTTTTCTTTATCATATTTTCCTTAAAATCAAAGTTTGTATTTTAAATGAGGCATGCGTTGATTCT
1 CTTTTCTTTGTCCTATTTTTCTTAAAATCAAAGTTTGTA-CTTAAATAAGACAT-CATTGATTCT
*
203965 CGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTAATTTCATTAGGATACATG
64 CGCAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATT-ATTTCATTAGGATACATG
204030 ACATTGATGCTTTGGTGTCGCAAGAGAAG
128 ACATTGATGCTTTGGTGTCGCAAGAGAAG
* ** ** * * * * ** * *
204059 CTTTTCTTTCTACC-ATTACTGATAGAACCAAAG-TTGTCTCTTAAATACGGA-AAAAATGAATG
1 CTTTTCTTTGT-CCTATTTTTCTTAAAATCAAAGTTTGT-ACTTAAATA-AGACATCATTG-ATT
** * * * * * * * * * * * *
204121 CTCATACTAA-TCCCCATTCCTTTCAAGATTAGGCACCATAAACATAATCTTCTTATAAGGGTAT
62 CTCGCA-AAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTATT-TCATTAGGATAC
* * * * * *
204185 ATGACCTT-AGTTCTTTGGTTTCGCAGGATACG
125 ATGACATTGA-TGCTTTGGTGTCGCAAGAGAAG
*** * * * * * * * *
204217 C-TTTCTTCCCACCAATTTTT-GTAAAGT-ATGAGTTCAT-TGCTCAAATGAA-ACAAACATGGA
1 CTTTTCTT-TGTCCTATTTTTCTTAAAATCA-AAGTT--TGTACTTAAAT-AAGAC-ATCATTGA
** * * * ** * *
204277 TTCTTAC-AGAGATCTTCATTCATTTCGTGATTAGG--CGCAATAAACACATTATTCTCCTCAAG
60 TTCTCGCAAAAG-TCTCCATTCTTTTCAAGATTAGGAAC-CAA-AAACACATTATT-TCAT-TAG
** * * * *
204339 G-CGCATGATATTGATTCTTT--TG-CG--TGA-AAT
120 GATACATGACATTGATGCTTTGGTGTCGCAAGAGAAG
* * * * *
204369 CTTTTCTTTG-CCTCACTTTCCTTAAAATCAAAGTTTGTATTTTAAATTAGGCATGCATTGATTC
1 CTTTTCTTTGTCCT-ATTTTTCTTAAAATCAAAGTTTGTA-CTTAAATAAGACAT-CATTGATTC
* * * * *
204433 TCGTAAAAGTCTCCATTCTATCCTAGATT-GGAAACCAAAAACACATTCTCTTCATTAGGATACA
63 TCGCAAAAGTCTCCATTCTTTTCAAGATTAGG-AACCAAAAACACATTAT-TTCATTAGGATACA
*
204497 TGACATTGATGCTTTGGTGTCGCAAGAGAGG
126 TGACATTGATGCTTTGGTGTCGCAAGAGAAG
* * ** * * * * **
204528 CTTTTC-TT-TCCAACGTAATCGATAAAATCAAAATTTGT-CTCCTAAATAGGACA-AAGAGGAA
1 CTTTTCTTTGTCCTA-TTTTTC-TTAAAATCAAAGTTTGTACT--TAAATAAGACATCA-TTG-A
* * * * * * * * *
204589 TACTCACACTAA-TC-CCATTCTTTTCAGGATTAGGCACCATAAACA-ATGTCTTCTAATAAGGA
60 TTCTCGCA-AAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACAT-TATT-TCATTAGGA
* * * *
204651 TAAATGATATTGATGCTTTGGTTTCGC--GAGAAA
122 TACATGACATTGATGCTTTGGTGTCGCAAGAGAAG
* *** * * * * ** * * * *
204684 CACTTTCTTCCCACCAATTTTT-GTAAATTCAAA-TTTCGTGCCCCAAATGACACAAGCATGGAT
1 C-TTTTCTT-TGTCCTATTTTTCTTAAAATCAAAGTTT-GT-ACTTAAATAAGAC-ATCATTGAT
* * * * * * * * * *
204747 TCTAG-TAAAGATCTTCATTCATTTCAGGATTAGGCACTATAGACACATTCTTTTCATTAGGATA
61 TCTCGCAAAAG-TCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATT-ATTTCATTAGGATA
* ** * ** * * ** * *
204811 AATGGTATTGATGGTTTTCTTTTGCGTGAAAAT
124 CATGACATTGATGCTTTGGTGTCGCAAGAGAAG
** * *
204844 CTTTTCTTTG-CCTTATTTACCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCGTTGATTC
1 CTTTTCTTTGTCC-TATTTTTCTTAAAATCAAAGTTTGTAC-TTAAATAAGACAT-CATTGATTC
* * * *
204908 TCGCAAAAGTCTCCACTCTTTTCAAGATTGGGAACCAAAAACACGTTCCTTTCATTAGGATACAT
63 TCGCAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATT-ATTTCATTAGGATACAT
*
204973 GACATTGATGCTTTGGTGCCGCAAGAGAAG
127 GACATTGATGCTTTGGTGTCGCAAGAGAAG
* ** * ** * * * *
205003 CTTTTCTTT-CCACCGTTATTGATAGAATCAAAG-TTGTCTCTTAAATAAGACAAACA-TGAATA
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCAAAGTTTGT-ACTTAAATAAGAC-ATCATTG-ATT
** * * * * * * * * * * *
205065 CTCATACTAA-TCCCCACTCCTTTAAAGATTAGGCACCATAAACATAGTCTTCTCATAAGGATAC
62 CTCGCA-AAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTATT-TCATTAGGATAC
* * *
205129 ATGATC-TTGATGCTTTGGTTTCGCAGGATACA-
125 ATGA-CATTGATGCTTTGGTGTCGCAAGAGA-AG
* *** * * * * * * * * * *
205161 C-TTCCTTCCCCACAATTTTT-GTAAAGT--ATGATTTCATTGCTCAAATGAGACAAACATAGAT
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCAAAG-TTT--GTACTTAAATAAGAC-ATCATTGAT
* ** * * * ** * * * ** *
205222 TCT--TATAGGGATATTCATTCATTTCGTGATTAGGCACTATAAACACATTCACCTCTTTAGGAT
61 TCTCGCA-AAAG-TCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATT-ATTTCATTAGGAT
* * * ** * ** *
205285 AAATGATAGTT-ATGGTTTATTTTTC-CTTG-GAAAT
123 ACATGACA-TTGATGCTTT-GGTGTCGCAAGAG-AAG
* *
205319 CTTTTCTTTATCACT-TTTTCCTTAAAATCAAAGTTTGTACTTTAAA-AGAGACATGCATTGATT
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCAAAGTTTGTAC-TTAAATA-AGACAT-CATTGATT
* * * * *
205382 CTTGCAAAAGTCTCCATTCTTTTCAAGTTTGGGAACGAAAAACACATTAATTTCATTAGTATACA
62 CTCGCAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATT-ATTTCATTAGGATACA
*
205447 TGACATTGATGCTTTGGTGTCGCAAGAGAAA
126 TGACATTGATGCTTTGGTGTCGCAAGAGAAG
* ** * ** * * * ** * **
205478 CTTTTCTTT-CCACCGTTATTGATAGAATCAAAG-TTGTCTCTTAAATACGGA-AAAAATGAAAG
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCAAAGTTTGT-ACTTAAATA-AGACATCATTG-ATT
** * * * * * * * *
205540 CTCATACTAA-TC-CGCATTCCTTTCATGATTAGGCACCATAAACATAGTCTTCTCA-TAGGGAT
62 CTCGCA-AAAGTCTC-CATTCTTTTCAAGATTAGGAACCAAAAACACATTATT-TCATTA-GGAT
* * * *
205602 ACATGATC-TTGATGCTTTGGTTTCGCAGGATACG
123 ACATGA-CATTGATGCTTTGGTGTCGCAAGAGAAG
*** * * * * * * * * * *
205636 CTTTT-TTCCCCACCATTTTT-GTAAAGT-ATGAGTTCTTTGCTCAAATGAGACAAACATGGATT
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCA-AAGTT-TGTACTTAAATAAGAC-ATCATTGATT
* * ** * * ** * * * * *
205698 CTTG-TAGGGATCTTCATTCATTTCGTGATTAGGTACTATAAACACATT-TCCCTCTTTAGGATA
62 CTCGCAAAAG-TCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTAT--TTCATTAGGATA
* * * * * ** * * * *
205761 AACGATATTTATGGTTTTCTTTTGCATG-GAAAT
124 CATGACATTGATGCTTTGGTGTCGCAAGAG-AAG
* * * * *
205794 CTTTTCTTTGTCATATTTTCCATAAAATCAAAATTTGTACTCTAAATGAGACATGCATTGATTCT
1 CTTTTCTTTGTCCTATTTTTCTTAAAATCAAAGTTTGTACT-TAAATAAGACAT-CATTGATTCT
* * *
205859 CGCAAAAGTCTCCATTCTTTTCAAGATTTGGAACCAAAAAAACATTCTTTACATTAGGATACATG
64 CGCAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTATTT-CATTAGGATACATG
* *
205924 AGATTGATGCTTTGGCGTCGCAAGAGAAG
128 ACATTGATGCTTTGGTGTCGCAAGAGAAG
* * * * * * * * ** *
205953 CTTTTCTTT-CCACCATTACTGC-TAGAACCAAAG-TTGTCTCTTAAATACGGA-AAAAATGAAT
1 CTTTTCTTTGTC-CTATT-TTTCTTAAAATCAAAGTTTGT-ACTTAAATA-AGACATCATTG-AT
* ** * * * * * * * * * *
206014 GCTCATACTAA-TCCCCATTCCTTTCATGATTAGGCACCATAAACATAGTCTTCTCATAAGGATA
61 TCTCGCA-AAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTATT-TCATTAGGATA
* * * * *
206078 CATGATC-TTGATGCTTTGGTTTCACAGGATACG
124 CATGA-CATTGATGCTTTGGTGTCGCAAGAGAAG
** * * * * * * * * *
206111 CTTTT-TTCCTCACCT-TTTTTGC--AAAGT-ATGAGTTCTTTGCTCAAATGAGATAAACATGGA
1 CTTTTCTT--TGTCCTATTTTT-CTTAAAATCA-AAGTT-TGTACTTAAATAAGA-CATCATTGA
* * ** * * ** * * * * * *
206171 TTCTTG-TAGGGATCTTCATTCATTTCGTGATTAGGTACTATAAACACATTCTCCTCTTTAGGAT
60 TTCTCGCAAAAG-TCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTAT-TTCATTAGGAT
* * * * ** * * * *
206235 AAATGATATTTATGGTTTTCTTTTGCATG-GAAAT
123 ACATGACATTGATGCTTTGGTGTCGCAAGAG-AAG
* * *
206269 CTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCT
1 CTTTTCTTTGTCCTATTTTTCTTAAAATCAAAGTTTGTAC-TTAAATAAGACAT-CATTGATTCT
* * * *
206334 TGCAAAAGTCTTCATTCTTTCCAAGATTGGGAACCAAAAACACATTCATTTCATTAGGATACATG
64 CGCAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATT-ATTTCATTAGGATACATG
206399 ACATTGATGCTTTGGTGTCGCAAGAGAAG
128 ACATTGATGCTTTGGTGTCGCAAGAGAAG
* ** * ** * * * * *
206428 CTTTTCTTT-CCACCGTTATTGATAGAATCAAAG-TTGTCTCTTAAATAAAACA-AATATGAATA
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCAAAGTTTGT-ACTTAAATAAGACATCAT-TG-ATT
** * * * * * * * * * *
206490 CTCATACTAA-TC-CATATTC-CTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATA
62 CTCGCA-AAAGTCTC-CATTCTTTTCAAGATTAGGAACCAAAAACACATTATT-TCATTAGGATA
* * * * *
206552 CATGATATTGATGCTTT-GTCTTCGCAGGATACG
124 CATGACATTGATGCTTTGGT-GTCGCAAGAGAAG
** * * * * * * * * * *
206585 -TTTT-TTTCCCCACAATTTTT-GTAAAGT-ATGAGTTCTTTGCTCAAATGAGACAAACATAGAT
1 CTTTTCTTT-GTC-CTATTTTTCTTAAAATCA-AAGTT-TGTACTTAAATAAGAC-ATCATTGAT
* * ** * * * ** * *** * * *
206646 TCTTG-TAGGGACCTTCATTCATTTCGTGATTAGGCACTGTAAACACATTCTCCTCTTTAGGATA
61 TCTCGCAAAAG-TCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTAT-TTCATTAGGATA
* * * ** * * ** *
206710 AATGATAGTT-ATGGTTTTCTTTTGCTTG-GAAAT
124 CATGACA-TTGATGCTTTGGTGTCGCAAGAG-AAG
* * *
206743 CTTTTCTTTATCACT-TTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTC
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCAAAGTTTGTAC-TTAAATAAGACAT-CATTGATTC
* * **
206807 TTGCAAAAGTCTCCATTCTTTCCAAGATCGGGAACCAAAAACACATTCATTTCATTAGGATACAT
63 TCGCAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATT-ATTTCATTAGGATACAT
* *
206872 GACATTGATGCTTTGGTGTTGCAAGAGAAA
127 GACATTGATGCTTTGGTGTCGCAAGAGAAG
* ** * ** * * * * * *
206902 CTTTTCTTT-CCACCGTTATTGATAGAATCAAAG-CTGTCTCTTAAATAAGGCA-AATATGAATA
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCAAAGTTTGT-ACTTAAATAAGACATCAT-TG-ATT
** * * * * * * * * * **
206964 CTCATACTAA-TC-CACATTC-CTTCAGGATTAGGCACCATATACATAGTCTTCTCAGAAGGATA
62 CTCGCA-AAAGTCTC-CATTCTTTTCAAGATTAGGAACCAAAAACACATTATT-TCATTAGGATA
* * * * *
207026 CATGATC-TTGATGCTTTGGTTTCACAGGATACG
124 CATGA-CATTGATGCTTTGGTGTCGCAAGAGAAG
*** * * ** * * * * * *
207059 C-TTTCTTCCCACCAATTTTT-GTAAGGT-ATGAGTTCAT-TGCTCAAATAAGACAAACATGGAC
1 CTTTTCTT-TGTCCTATTTTTCTTAAAATCA-AAGTT--TGTACTTAAATAAGAC-ATCATTGAT
* * ** * * ** * * * *
207120 TCTTG-TAGGGATCTTCATTCATTTCGTGATTA-GATACTATAAACACATTCTCCTT-TTTAGGA
61 TCTCGCAAAAG-TCTCCATTCTTTTCAAGATTAGGA-ACCAAAAACACATTAT--TTCATTAGGA
* * * * ** * * * *
207182 TAAATGATATTTATGGTTTTCTTTTGCATG-GAAAT
122 TACATGACATTGATGCTTTGGTGTCGCAAGAG-AAG
* * * * **
207217 CTTTTCTTTGTCATATTTTCCTTCAAATCAAAGTTTGTACTCTAAATGAGACATGCGCTGATTCT
1 CTTTTCTTTGTCCTATTTTTCTTAAAATCAAAGTTTGTACT-TAAATAAGACAT-CATTGATTCT
* * *
207282 CGCAAAAGTCTCCATTCTTTTCAAGATTTGGAACCAAAAAAACATTCTTTTCATTAGGATACATG
64 CGCAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATT-ATTTCATTAGGATACATG
207347 ACATTGATGCTTTGGTGTCGCAAGAGAAG
128 ACATTGATGCTTTGGTGTCGCAAGAGAAG
* * ** ** * * * * * *
207376 CTTTTCTTT-CCACCATTACTGATAGAACCAAAG-TTGTCTCTTAAATACAGA-AACAATGAATG
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCAAAGTTTGT-ACTTAAATA-AGACATCATTG-ATT
** * * * * * * * * * * *
207438 CTCATACTAA-TCCCCGTTCCTTTCATGATTAGGCACCATAAACATAGTCTTCTCATAAGGATAC
62 CTCGCA-AAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTATT-TCATTAGGATAC
* * * *
207502 ATGATC-TTGATGCTTTGGTTTCGCAGGATACG
125 ATGA-CATTGATGCTTTGGTGTCGCAAGAGAAG
*** * * * * * * * * * *
207534 CTTTT-TTCCCCACCATTTTT-GT-AAAGCATGAGTTCTTTGCTCAAATGAGACAAACATGGATT
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCA-AAGTT-TGTACTTAAATAAGAC-ATCATTGATT
* ** * * ** * * * *
207596 CT--TATAGGGATCTTCATTCATTTCGTGATTAGGTA-CAATAAACACATTCTCCTCTTTAGGAT
62 CTCGCA-AAAG-TCTCCATTCTTTTCAAGATTAGGAACCAA-AAACACATTAT-TTCATTAGGAT
* * * * ** * * * *
207658 AAATGATATTTATGGTTTTCTTTTGCATG-GAAAT
123 ACATGACATTGATGCTTTGGTGTCGCAAGAG-AAG
* * * * * *
207692 CTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTATTTTAAATGAGGCATTCGTTGATTCT
1 CTTTTCTTTGTCCTATTTTTCTTAAAATCAAAGTTTGTA-CTTAAATAAGACA-TCATTGATTCT
* * *
207757 CGCAAAAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAACACATTAATTTTATTAGGATACATG
64 CGCAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATT-ATTTCATTAGGATACATG
207822 ACATTGATGCTTTGGTGTCGCAAGAGAAG
128 ACATTGATGCTTTGGTGTCGCAAGAGAAG
* * ** ** * * * * ** * *
207851 CTTTTCTTT-CCACCATTACTGATAGAACCAAAG-TTGTCTCTTAAATACGGA-AAAAATGAATG
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCAAAGTTTGT-ACTTAAATA-AGACATCATTG-ATT
* ** * * * * * * * * * *
207913 GTCATACTAA-TCCCCATTCCTTTCAAGATTAGGCACCATAAACATAATCTTCTCATAAGGATAT
62 CTCGCA-AAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTATT-TCATTAGGATAC
* * * * * * *
207977 ATGACCTTGGTTCTTTGGTTTCGCAGGATACG
125 ATGACATTGATGCTTTGGTGTCGCAAGAGAAG
*** * * * * * * * *
208009 C-TTTCTTCCCACCAATTTTT-GTAAAGT-ATGAGTTCAT-TGCTCAAATGAA-ACAAACATGGA
1 CTTTTCTT-TGTCCTATTTTTCTTAAAATCA-AAGTT--TGTACTTAAAT-AAGAC-ATCATTGA
** * * * ** * * *
208069 TTCTTAC-AGAGATCTTCATTCATTTCGGGATTAGG--CGCAATAAACACATTATTCTCCTCAAG
60 TTCTCGCAAAAG-TCTCCATTCTTTTCAAGATTAGGAAC-CAA-AAACACATTATT-TCATTAGG
** * * ** * * ** *
208131 ACGCATGATATTGATGGTTTTCTTTTGCGTGA-AAT
121 ATACATGACATTGATGCTTTGGTGTCGCAAGAGAAG
* * * * *
208166 CTTTTCTTTG-ACTCA-CTTTCGTTAAAATCAAAGTTTGTATTTTAAATTAGGCATGCATTGATT
1 CTTTTCTTTGTCCT-ATTTTTC-TTAAAATCAAAGTTTGTA-CTTAAATAAGACAT-CATTGATT
* * * * *
208229 CTCGTAAAAGTCTCCATCCTTTCCTAGATT-GGAAACCAAAAACACATTCTCTTCATTAGGATAC
62 CTCGCAAAAGTCTCCATTCTTTTCAAGATTAGG-AACCAAAAACACATTAT-TTCATTAGGATAC
208293 ATGACATTGATGCTTTGGTGTCGCAAGAGAAG
125 ATGACATTGATGCTTTGGTGTCGCAAGAGAAG
** * * * * ** *
208325 CTTTTC-TT-TCC-ACCGTTACTGATAGAACCAAAG-TTGT-CTTTTAAATACGGA-AAAAATGA
1 CTTTTCTTTGTCCTA-TTTTTCT--TAAAATCAAAGTTTGTAC--TTAAATA-AGACATCATTG-
* ** * * * * * * * * * *
208384 ATGCTCATACTAA-TCCCCATTCCTTTCATGATTAGGCACCAAAAACATAGTCTTCTCATAAGTA
59 ATTCTCGCA-AAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTATT-TCATTAGGA
* * * *
208448 TACATGATC-TTGATGCTTTGGTTTCGCAGGATACG
122 TACATGA-CATTGATGCTTTGGTGTCGCAAGAGAAG
*** * * * * * * * * * *
208483 CTTTT-TTCCCCACCATTTTT-GTAAAGT-ATGAGTTCTTTGCTCAAATGAGACAAACATGGATT
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCA-AAGTT-TGTACTTAAATAAGAC-ATCATTGATT
* * ** * * ** * * * * *
208545 CTTG-TAGGGATCTTCATTCATTTCGTGATTAGGTACTATAAACACATT-TCCCTCTTTAGGATA
62 CTCGCAAAAG-TCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTAT--TTCATTAGGATA
* * * * * ** * * * *
208608 AACGATATTTATGGTTTTCTTTTGCATG-GAAAT
124 CATGACATTGATGCTTTGGTGTCGCAAGAG-AAG
* * * * *
208641 CTTTTCTTTGTCATATTTTCCATAAAATCAAAATTTGTACTCTAAATGAGACATGCATTGATTCT
1 CTTTTCTTTGTCCTATTTTTCTTAAAATCAAAGTTTGTACT-TAAATAAGACAT-CATTGATTCT
* * *
208706 CGCAAAAGTCTCCATTCTTTTCAAGATTTGGAACCAAAAAAACATTCTCTTCATTAGGATACATG
64 CGCAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTAT-TTCATTAGGATACATG
208771 ACATTGATGCTTTGGTGTCGCAAGAGAAG
128 ACATTGATGCTTTGGTGTCGCAAGAGAAG
* * * * * * * * ** *
208800 CTTTTCTTT-CCACCATTACTAC-TAGAACCAAAG-TTGTCTCTTAAATATGGA-AAAAATGAAT
1 CTTTTCTTTGTC-CTATT-TTTCTTAAAATCAAAGTTTGT-ACTTAAATA-AGACATCATTG-AT
* ** * * * * * * * * * *
208861 GCTCATACTAA-TCCCCATTCCTTTCATGATTAGGCACCATAAACATAGTCTTCTCATAAGGATA
61 TCTCGCA-AAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTATT-TCATTAGGATA
* * * * *
208925 CATGATC-TTGATGCTTTGGTTTCACAGGATATG
124 CATGA-CATTGATGCTTTGGTGTCGCAAGAGAAG
** * * * * * * * * * *
208958 CTTTT-TTCCTCACCT-TTTTT-GTAAAGT-ATGAGTTCTTTGCTCAAATGAGATAAACATGGAT
1 CTTTTCTT--TGTCCTATTTTTCTTAAAATCA-AAGTT-TGTACTTAAATAAGA-CATCATTGAT
* * ** * * ** * *** * * *
209019 TCTTG-TAGGGATCTTCATTCATTTCGTGATTAGGTACTGTAAACACATTCTCCTCTTTAGGATA
61 TCTCGCAAAAG-TCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTAT-TTCATTAGGATA
* * * * ** * * * *
209083 AATGATATTTATGGTTTTCTTTTGCATG-GAAAT
124 CATGACATTGATGCTTTGGTGTCGCAAGAG-AAG
* * * *
209116 CTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTCTAAATGAGACATGCGTTGATTCT
1 CTTTTCTTTGTCCTATTTTTCTTAAAATCAAAGTTTGTACT-TAAATAAGACAT-CATTGATTCT
* * * *
209181 CGCAAAAGTCTCCATTCTTTTGAAGATTGGGAACCAAAAAAACATTCTTTTCATTAGGATACATG
64 CGCAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATT-ATTTCATTAGGATACATG
209246 ACATTGATGCTTTGGTGTCGCAAGAGAAG
128 ACATTGATGCTTTGGTGTCGCAAGAGAAG
* ** * ** * * * * *
209275 CTTTTCTTT-CCACCGTTATTGATAGAATCAAAG-TTGTCTCTTAAATAAAACA-AATATGAATA
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCAAAGTTTGT-ACTTAAATAAGACATCAT-TG-ATT
** * * * * * * * * * *
209337 CTCATACTAA-TC-CATATTC-CTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATA
62 CTCGCA-AAAGTCTC-CATTCTTTTCAAGATTAGGAACCAAAAACACATTATT-TCATTAGGATA
* * *
209399 CATGATC-TTGATGCTTTGGCT-TCGCAGGATACG
124 CATGA-CATTGATGCTTTGG-TGTCGCAAGAGAAG
** * * * * * * * * * *
209432 -TTTT-TTTCCCCACAATTTTT-GTAAAGT-ATGAGTTCTTTGCTCAAATGAGACAAACATAGAT
1 CTTTTCTTT-GTC-CTATTTTTCTTAAAATCA-AAGTT-TGTACTTAAATAAGAC-ATCATTGAT
* * ** * * * * * *** * * *
209493 TCTTG-TAGGGACCTTCATTCATTTCATGATTAGGCACTGTAAACACATTCTCCTCTTTAGGATA
61 TCTCGCAAAAG-TCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTAT-TTCATTAGGATA
* * * * ** * * * *
209557 AATGATATTTATGGTTTTCTTTTGCATG-GAAAT
124 CATGACATTGATGCTTTGGTGTCGCAAGAG-AAG
* * * *
209590 CTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCGTTGATTCT
1 CTTTTCTTTGTCCTATTTTTCTTAAAATCAAAGTTTGTAC-TTAAATAAGACAT-CATTGATTCT
*
209655 CGCAAAAGTCTCCATTCTTTTCAATATT-GGTAACCAAAAACACATTCATTTCATTAGGATACAT
64 CGCAAAAGTCTCCATTCTTTTCAAGATTAGG-AACCAAAAACACATT-ATTTCATTAGGATACAT
209719 GACATTGATGCTTTGGTGTCGCAAGAGAAG
127 GACATTGATGCTTTGGTGTCGCAAGAGAAG
* * * ** * * * * *
209749 CTTTTCTTT-CCACCATTATTGATAGAATCAAAG-TTGTCTCTTAAATAAGATA-AATATGAATA
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCAAAGTTTGT-ACTTAAATAAGACATCAT-TG-ATT
** * * * * * * * * *
209811 CTCATACTAA-TC-CACATTC-CTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATA
62 CTCGCA-AAAGTCTC-CATTCTTTTCAAGATTAGGAACCAAAAACACATTATT-TCATTAGGATA
* * *
209873 CATGATC-TTGATGCTTTGGCT-TCGCAGGATACG
124 CATGA-CATTGATGCTTTGG-TGTCGCAAGAGAAG
* ** * * * * * * * * * *
209906 -TTTTTTTTCCCCACAATTTTT-GTAAAGT-ATGAGTTCTTTGCTCAAATGAGACAAACATAGAT
1 CTTTTCTTT-GTC-CTATTTTTCTTAAAATCA-AAGTT-TGTACTTAAATAAGAC-ATCATTGAT
* * ** * * * ** * * * * * *
209968 TCTTG-TAGGGACCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATA
61 TCTCGCAAAAG-TCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTAT-TTCATTAGGATA
* * * * ** * * * *
210032 AATGATATTTATGGTTTTCTTTTGCATG-GAAAT
124 CATGACATTGATGCTTTGGTGTCGCAAGAG-AAG
* * * * * *
210065 CTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTATTTTAAATGAGGCATTCGTTGATTCT
1 CTTTTCTTTGTCCTATTTTTCTTAAAATCAAAGTTTGTA-CTTAAATAAGACA-TCATTGATTCT
* * *
210130 CGCAAAAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAACACATTAATTTTATTAGGATACATG
64 CGCAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATT-ATTTCATTAGGATACATG
210195 ACATTGATGCTTTGGTGTCGCAAGAGAAG
128 ACATTGATGCTTTGGTGTCGCAAGAGAAG
* * ** ** * * * * ** * *
210224 CTTTTCTTT-CCACCATTACTGATAGAACCAAAG-TTGTCTCTTAAATACGGA-AAAAATGAATG
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCAAAGTTTGT-ACTTAAATA-AGACATCATTG-ATT
* ** * * * * * * * * * * *
210286 GTCATACTAA-TCCCCATTCCTTTAAAGATTAGGCACCATAAACATAATCTTCTCATAAGGATAT
62 CTCGCA-AAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTATT-TCATTAGGATAC
* * * * * * *
210350 ATGACCTTGGTTCTTTGGTTTCGCAGGATACG
125 ATGACATTGATGCTTTGGTGTCGCAAGAGAAG
*** * * * * * * * *
210382 C-TTTCTTCCCACCAATTTTT-GTAAAGT-ATGAGTTCAT-TGCTCAAATGAA-ACAAACATGGA
1 CTTTTCTT-TGTCCTATTTTTCTTAAAATCA-AAGTT--TGTACTTAAAT-AAGAC-ATCATTGA
** * * * ** * * *
210442 TTCTTAC-AGAGATCTTCATTCATTTCGGGATTAGG--CGCAATAAACACATTATTCTCCTCAAG
60 TTCTCGCAAAAG-TCTCCATTCTTTTCAAGATTAGGAAC-CAA-AAACACATTATT-TCATTAGG
** * * ** * * ** *
210504 ACGCATGATATTGATGGTTTTCTTTTGCGTGA-AAT
121 ATACATGACATTGATGCTTTGGTGTCGCAAGAGAAG
* * * * *
210539 CTTTTCTTTG-ACTCA-CTTTCGTTAAAATCAAAGTTTGTATTTTAAATTAGGCATGCATTGATT
1 CTTTTCTTTGTCCT-ATTTTTC-TTAAAATCAAAGTTTGTA-CTTAAATAAGACAT-CATTGATT
* * * *
210602 CTCGTAAAAGTCTCCATTCTTTCCTAGATT-GGAAACCAAAAACACATTCTCTTCATTAGGATAC
62 CTCGCAAAAGTCTCCATTCTTTTCAAGATTAGG-AACCAAAAACACATTAT-TTCATTAGGATAC
210666 ATGACATTGATGCTTTGGTGTCGCAAGAGAAG
125 ATGACATTGATGCTTTGGTGTCGCAAGAGAAG
** * * * * ** *
210698 CTTTTC-TT-TCC-ACCGTTACTGATAGAACCAAAG-TTGT-CTTTTAAATACGGA-AAAAATGA
1 CTTTTCTTTGTCCTA-TTTTTCT--TAAAATCAAAGTTTGTAC--TTAAATA-AGACATCATTG-
* ** * * * * * * * * *
210757 ATGCTCATACTAA-TCCCCATTCCTTTCATGATTAGGCACCAAAAACATATTCTTCTCATAAGTA
59 ATTCTCGCA-AAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTATT-TCATTAGGA
* * * *
210821 TACATGATC-TTGATGCTTTGGTTTCGCAGGATACG
122 TACATGA-CATTGATGCTTTGGTGTCGCAAGAGAAG
*** * * * * * * * * * *
210856 CTTTT-TTCCCCACCATTTTT-GTAAAGT-ATGAGTTCTTTGCTCAAATGAGACAAACATGGATT
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCA-AAGTT-TGTACTTAAATAAGAC-ATCATTGATT
* * ** * * ** * * * * *
210918 CTTG-TAGGGATCTTCATTCATTTCGTGATTAGGTACTATAAACACATT-TCCCTCTTTAGGATA
62 CTCGCAAAAG-TCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTAT--TTCATTAGGATA
* * * * * ** * * * *
210981 AACGATATTTATGGTTTTCTTTTGCATG-GAAAT
124 CATGACATTGATGCTTTGGTGTCGCAAGAG-AAG
* * * * *
211014 CTTTTCTTTGTCATATTTTCCATAAAATCAAAATTTGTACTCTAAATGAGACATGCATTGATTCT
1 CTTTTCTTTGTCCTATTTTTCTTAAAATCAAAGTTTGTACT-TAAATAAGACAT-CATTGATTCT
* * *
211079 CGCAAAAGTCTCCATTCTTTTCAAGATTTGGAACCAAAAAAACATTCTCTTCATTAGGATACATG
64 CGCAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTAT-TTCATTAGGATACATG
211144 ACATTGATGCTTTGGTGTCGCAAGAGAAG
128 ACATTGATGCTTTGGTGTCGCAAGAGAAG
* * * * * * * * ** *
211173 CTTTTCTTT-CCACCATTACTAC-TAGAACCAAAG-TTGTCTCTTAAATATGGA-AAAAATGAAT
1 CTTTTCTTTGTC-CTATT-TTTCTTAAAATCAAAGTTTGT-ACTTAAATA-AGACATCATTG-AT
* ** * * * * * * * * * *
211234 GCTCATACTAA-TCCCCATTCCTTTCATGATTAGGCACCATAAACATAGTCTTCTCATAAGGATA
61 TCTCGCA-AAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTATT-TCATTAGGATA
* * * *
211298 CATGATC-TTGATGCTTTGGTTTCACAAGATATG
124 CATGA-CATTGATGCTTTGGTGTCGCAAGAGAAG
** * * * * * * * * * *
211331 CTTTT-TTCCTCACCT-TTTTT-GTAAAGT-ATGAGTTCTTTGCTCAAATGAGATAAACATGGAT
1 CTTTTCTT--TGTCCTATTTTTCTTAAAATCA-AAGTT-TGTACTTAAATAAGA-CATCATTGAT
* * ** * * ** * *** * * *
211392 TCTTG-TAGGGATCTTCATTCATTTCGTGATTAGGTACTGTAAACACATTCTCCTCTTTAGGATA
61 TCTCGCAAAAG-TCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTAT-TTCATTAGGATA
* * * * ** * * * *
211456 AATGATATTTATGGTTTTCTTTTGCATG-GAAAT
124 CATGACATTGATGCTTTGGTGTCGCAAGAG-AAG
* * * *
211489 CTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTCTAAATGAGACATGCGTTGATTCT
1 CTTTTCTTTGTCCTATTTTTCTTAAAATCAAAGTTTGTACT-TAAATAAGACAT-CATTGATTCT
* * * *
211554 CGCAAAAGTCTCCATTCTTTTGAAGATTGGGAACCAAAAAAACATTCTTTTCATTAGGATACATG
64 CGCAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATT-ATTTCATTAGGATACATG
*
211619 ACATTGATGCTTTGGTGTCGCAGGAGAAG
128 ACATTGATGCTTTGGTGTCGCAAGAGAAG
* ** * ** * * * * * *
211648 CTTTTCTTT-CCACCGTTATTGATAGAATCAAAG-TTGTCTCTTAAGTAAAACA-AATATGAATA
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCAAAGTTTGT-ACTTAAATAAGACATCAT-TG-ATT
** * * * * * * * * * *
211710 CTCATACTAA-TC-CATATTC-CTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATA
62 CTCGCA-AAAGTCTC-CATTCTTTTCAAGATTAGGAACCAAAAACACATTATT-TCATTAGGATA
* * *
211772 CATGATC-TTGATGCTTTGGCT-TCGCAGGATACG
124 CATGA-CATTGATGCTTTGG-TGTCGCAAGAGAAG
** * * * * * * * * * *
211805 -TTTT-TTTCCCCACAATTTTT-GTAAAGT-ATGAGTTCTTTGCTCAAATGAGACAAACATAGAT
1 CTTTTCTTT-GTC-CTATTTTTCTTAAAATCA-AAGTT-TGTACTTAAATAAGAC-ATCATTGAT
* * ** * * * * * *** * * *
211866 TCTTG-TAGGGACCTTCATTCATTTCATGATTAGGCACTGTAAACACATTCTCCTCTTTAGGATA
61 TCTCGCAAAAG-TCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTAT-TTCATTAGGATA
* * * * ** * * * *
211930 AATGATATTTATGGTTTTCTTTTGCATG-GAAAT
124 CATGACATTGATGCTTTGGTGTCGCAAGAG-AAG
* * * *
211963 CTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCGTTGATTCT
1 CTTTTCTTTGTCCTATTTTTCTTAAAATCAAAGTTTGTAC-TTAAATAAGACAT-CATTGATTCT
*
212028 CGCAAAAGTCTCCATTCTTTTCAATATT-GGTAACCAAAAACACATTCATTTCATTAGGATACAT
64 CGCAAAAGTCTCCATTCTTTTCAAGATTAGG-AACCAAAAACACATT-ATTTCATTAGGATACAT
212092 GACATTGATGCTTTGGTGTCGCAAGAGAAG
127 GACATTGATGCTTTGGTGTCGCAAGAGAAG
* * * ** * * * * *
212122 CTTTTCTTT-CCACCATTATTGATAGAATCAAAG-TTGTCTCTTAAATAAGATA-AATATGAATA
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCAAAGTTTGT-ACTTAAATAAGACATCAT-TG-ATT
** * * * * * * * * *
212184 CTCATACTAA-TC-CACATTC-CTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATA
62 CTCGCA-AAAGTCTC-CATTCTTTTCAAGATTAGGAACCAAAAACACATTATT-TCATTAGGATA
* * *
212246 CATGATC-TTGATGCTTTGGCT-TCGCAGGATACG
124 CATGA-CATTGATGCTTTGG-TGTCGCAAGAGAAG
* ** * * * * * * * * * *
212279 -TTTTTTTTCCCCACAATTTTT-GTAAAGT-ATGAGTTCTTTGCTCAAATGAGACAAACATAGAT
1 CTTTTCTTT-GTC-CTATTTTTCTTAAAATCA-AAGTT-TGTACTTAAATAAGAC-ATCATTGAT
* * ** * * * ** * * * * * *
212341 TCTTG-TAGGGACCTTCATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATA
61 TCTCGCAAAAG-TCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTAT-TTCATTAGGATA
* * * * ** * * * *
212405 AATGATATTTATGGTTTTCTTTTGCATG-GAAAT
124 CATGACATTGATGCTTTGGTGTCGCAAGAG-AAG
* * * * * *
212438 CTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTATTTTAAATGAGGCATTCGTTGATTCT
1 CTTTTCTTTGTCCTATTTTTCTTAAAATCAAAGTTTGTA-CTTAAATAAGACA-TCATTGATTCT
* * *
212503 CGCAAAAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAACACATTAATTTTATTAGGATACATG
64 CGCAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATT-ATTTCATTAGGATACATG
212568 ACATTGATGCTTTGGTGTCGCAAGAGAAG
128 ACATTGATGCTTTGGTGTCGCAAGAGAAG
* * ** ** * * * * ** * *
212597 CTTTTCTTT-CCACCATTACTGATAGAACCAAAG-TTGTCTCTTAAATACGGA-AAAAATGAATG
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCAAAGTTTGT-ACTTAAATA-AGACATCATTG-ATT
* ** * * * * * * * * * * *
212659 GTCATACTAA-TCCCCATTCCTTCCAAGATTAGGCACCATAAACATAATCTTCTCATAAGGATAT
62 CTCGCA-AAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTATT-TCATTAGGATAC
* * * * * * *
212723 ATGACCTTGGTTCTTTGGTTTCGCAGGATACG
125 ATGACATTGATGCTTTGGTGTCGCAAGAGAAG
*** * * * * * * * *
212755 C-TTTCTTCCCACCAATTTTT-GTAAAGT-ATGAGTTCAT-TGCTCAAATGAA-ACAAACATGGA
1 CTTTTCTT-TGTCCTATTTTTCTTAAAATCA-AAGTT--TGTACTTAAAT-AAGAC-ATCATTGA
** * * ** * * *
212815 TTCTTAC-AAAGATCTTCATTCATTTCGGGATTAGG--CGCAATAAACACATTATTCTCCTCAAG
60 TTCTCGCAAAAG-TCTCCATTCTTTTCAAGATTAGGAAC-CAA-AAACACATTATT-TCATTAGG
** * * ** * * ** *
212877 ACGCATGATATTGATGGTTTTCTTTTGCGTGA-AAT
121 ATACATGACATTGATGCTTTGGTGTCGCAAGAGAAG
* * * *
212912 CTTTTCTTTG-CCTCA-CTTTCGTTAAAATCAAAGTTTGTATTTTAAATTAGGCATGCATTGATT
1 CTTTTCTTTGTCCT-ATTTTTC-TTAAAATCAAAGTTTGTA-CTTAAATAAGACAT-CATTGATT
* * * *
212975 CTCGTAAAAGTCTCCATTCTTTCCTAGATT-GGAAACCAAAAACACATTCTCTTCATTAGGATAC
62 CTCGCAAAAGTCTCCATTCTTTTCAAGATTAGG-AACCAAAAACACATTAT-TTCATTAGGATAC
213039 ATGACATTGATGCTTTGGTGTCGCAAGAGAAG
125 ATGACATTGATGCTTTGGTGTCGCAAGAGAAG
* ** * * * * ** *
213071 CTTTTC-CT-TCC-ACCGTTACTGATAGAACCAAAG-TTGT-CTTTTAAATACGGA-AAAAATGA
1 CTTTTCTTTGTCCTA-TTTTTCT--TAAAATCAAAGTTTGTAC--TTAAATA-AGACATCATTG-
* *** * * * * * * * * * *
213130 ATGCTAATACTAA-TCCCCATTCCTTTCATGATTAGGCACCATAAACATAGTCTTCTCATAAGGA
59 ATTCTCGCA-AAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTATT-TCATTAGGA
* * * *
213194 TACATGATC-TTGATGCTTTGGTTTCGCAGGATACG
122 TACATGA-CATTGATGCTTTGGTGTCGCAAGAGAAG
** * * * * * * * * * *
213229 -TTTT-TTTCCCCACCATTTTT-GTAAAGT-ATGAGTTCTTTGCTCAAATGAGACAAACATGGAT
1 CTTTTCTTT-GTC-CTATTTTTCTTAAAATCA-AAGTT-TGTACTTAAATAAGAC-ATCATTGAT
* * ** * * ** * * * * *
213290 TCTTG-TAGGGATCTTCATTCATTTCGTGATTAGGTACTATAAACACATT-TCCCTCTTTAGGAT
61 TCTCGCAAAAG-TCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTAT--TTCATTAGGAT
* * * * * ** * * * *
213353 AAACGATATTTATGGTTTTCTTTTGCATG-GAAAT
123 ACATGACATTGATGCTTTGGTGTCGCAAGAG-AAG
* * * *
213387 CTTTTCTTTGTCATATTTTCCATAAAATCAAAGTTTGTACTCTAAATGAGACATGCATTGATTCT
1 CTTTTCTTTGTCCTATTTTTCTTAAAATCAAAGTTTGTACT-TAAATAAGACAT-CATTGATTCT
* * * *
213452 CGCAAAAGTCTCCATTCTTTTCAAGATTTGGAACCAAAAAAACAATCTCTTCATTAGGATACATG
64 CGCAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTAT-TTCATTAGGATACATG
213517 ACATTGATGCTTTGGTGTCGCAAGAGAAG
128 ACATTGATGCTTTGGTGTCGCAAGAGAAG
* ** * ** * * * * *
213546 CTTTTCTTT-CCACCGTTATTGATAGAATCAAAG-TTGTCTCTTAAATAAAACA-AATATGAATG
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCAAAGTTTGT-ACTTAAATAAGACATCAT-TG-ATT
** * * * * * * * * * *
213608 CTCATACTAA-TC-CATATTC-CTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATA
62 CTCGCA-AAAGTCTC-CATTCTTTTCAAGATTAGGAACCAAAAACACATTATT-TCATTAGGATA
* * *
213670 CATGATC-TTGATGCTTTGGCT-TCGCAGGATACG
124 CATGA-CATTGATGCTTTGG-TGTCGCAAGAGAAG
** * * * * * * * * * *
213703 -TTTT-TTTCCCCACAATTTTT-GTAAAGT-ATGAGTTCTTTGCTCAAATGAGACAAACATAGAT
1 CTTTTCTTT-GTC-CTATTTTTCTTAAAATCA-AAGTT-TGTACTTAAATAAGAC-ATCATTGAT
* * ** * * * ** * *** * * *
213764 TCTTG-TAGGGACCTTCATTCATTTCGTGATTAGGCACTGTAAACACATTCTCCTCTTTAGGATA
61 TCTCGCAAAAG-TCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTAT-TTCATTAGGATA
* * * * ** * * * *
213828 AATGATATTTATGGTTTTCTTTTGCATG-GAAAT
124 CATGACATTGATGCTTTGGTGTCGCAAGAG-AAG
* * *
213861 CTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCT
1 CTTTTCTTTGTCCTATTTTTCTTAAAATCAAAGTTTGTAC-TTAAATAAGACAT-CATTGATTCT
* * *
213926 TGCTAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCATTTCATTAGGATACATG
64 CGCAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATT-ATTTCATTAGGATACATG
* * *
213991 GCATTGATGCTTTGGTGTCGCAGGAGAGG
128 ACATTGATGCTTTGGTGTCGCAAGAGAAG
* ** * ** * * * * ** *
214020 CTTTTCTTT-CCACCGTTATTGATAGAATCAAAG-TTGTCTCTTAAATACGAAAAAAATGAATGT
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCAAAGTTTGT-ACTTAAATAAGACATCATTG-AT-T
** * * * * * * * * * * *
214083 -TCATACTAA-TCCCCACTCCTTTCAAGATTAGGCACCATAAACATAGTCTTCTCATAAGGATGC
62 CTCGCA-AAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTATT-TCATTAGGATAC
* * * *
214146 ATGATC-TTGATGCTTTGGTTTCGCAGGATACG
125 ATGA-CATTGATGCTTTGGTGTCGCAAGAGAAG
* *** * * * * * * * * *
214178 C-TTCCTTCCCCACAATTTTT-GTAAAGT-ATGAGTTCAT-TGCTCAAATGAGACAAACATGGAT
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCA-AAGTT--TGTACTTAAATAAGAC-ATCATTGAT
* ** * * * ** * *** * * *
214239 TCT--TATAGGGATATTCATTCATTTCGTGATTAGGCACTGTAAACACATTCTCCTCTTTAGGAT
61 TCTCGCA-AAAG-TCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTAT-TTCATTAGGAT
* * * ** * ** *
214302 AAATGATAGTT-ATGGTTTATTTTTC-CTTG-GAAAT
123 ACATGACA-TTGATGCTTT-GGTGTCGCAAGAG-AAG
* *
214336 CTTTTCTTTATCACT-TTTTCCTTAAAATCAAAGTTTGTACTTTAAATAAGACATGCATTGATTC
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCAAAGTTTGTAC-TTAAATAAGACAT-CATTGATTC
* * * * * *
214400 TTGCTAAAGTCTCCATTCTTTTCAAGTTTGGGAACCGAAAACACATTCATTTCAATAGGATACAT
63 TCGCAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATT-ATTTCATTAGGATACAT
214465 GACATTGATGCTTTGGTGTCGCAAGAGAAG
127 GACATTGATGCTTTGGTGTCGCAAGAGAAG
* * * ** * * * * *
214495 CTTTTCTTT-CCACCATTATTGATAGAATCAAAG-TTGTCTCTTAAATAAGATA-AATATGAATA
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCAAAGTTTGT-ACTTAAATAAGACATCAT-TG-ATT
** * * * * * * * * *
214557 CTCATACTAA-TC-CACATTC-CTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATA
62 CTCGCA-AAAGTCTC-CATTCTTTTCAAGATTAGGAACCAAAAACACATTATT-TCATTAGGATA
* * * * *
214619 CATGATC-TTGATGCTTTGGTTTCGTAGGATACG
124 CATGA-CATTGATGCTTTGGTGTCGCAAGAGAAG
*** * * * * * * * * * **
214652 CTTTT-TTCCCCACAATTTTT-GTAAAGT-ATGAGTTCTTTGCTCAAATGAGACAAACAAGGATT
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCA-AAGTT-TGTACTTAAATAAGAC-ATCATTGATT
* * ** * * * * * * * * * * *
214714 CTTG-TAGGGACCTTCATTCATTTCATGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAA
62 CTCGCAAAAG-TCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTAT-TTCATTAGGATAC
* * * ** * * * *
214778 ATGATATTTATGGTTTTCTTTTGCATG-GAAAT
125 ATGACATTGATGCTTTGGTGTCGCAAGAG-AAG
* ** * * *
214810 CTTTTCTTGGTTATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCGTTGATTCT
1 CTTTTCTTTGTCCTATTTTTCTTAAAATCAAAGTTTGTAC-TTAAATAAGACAT-CATTGATTCT
*
214875 CGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCATTTCATTAGGATACATG
64 CGCAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATT-ATTTCATTAGGATACATG
214940 ACATTGATGCTTTGGTGTCGCAAGAGAAG
128 ACATTGATGCTTTGGTGTCGCAAGAGAAG
* ** * ** * * * * *
214969 CTTTTCTTT-CCACCGTTATTGATAGAATCAAAG-TTGTCTCTTAAATAAAACA-AATATGAATG
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCAAAGTTTGT-ACTTAAATAAGACATCAT-TG-ATT
** * * * * * * * * * *
215031 CTCATACTAA-TC-CATATTC-CTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATA
62 CTCGCA-AAAGTCTC-CATTCTTTTCAAGATTAGGAACCAAAAACACATTATT-TCATTAGGATA
* * *
215093 CATGATC-TTGATGCTTTGGCT-TCGCAGGATACG
124 CATGA-CATTGATGCTTTGG-TGTCGCAAGAGAAG
** * * * * * * * * * *
215126 -TTTT-TTTCCCCACAATTTTT-GTAAAGT-ATGAGTTCTTTGCTCAAATGAGACAAACATAGAT
1 CTTTTCTTT-GTC-CTATTTTTCTTAAAATCA-AAGTT-TGTACTTAAATAAGAC-ATCATTGAT
* * ** * * * ** * *** * * *
215187 TCTTG-TAGGGACCTTCATTCATTTCGTGATTAGGCACTGTAAACACATTCTCCTCTTTAGGATA
61 TCTCGCAAAAG-TCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTAT-TTCATTAGGATA
* * * * ** * * * *
215251 AATGATATTTATGGTTTTCTTTTGCATG-GAAAT
124 CATGACATTGATGCTTTGGTGTCGCAAGAG-AAG
* * * *
215284 ATTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCT
1 CTTTTCTTTGTCCTATTTTTCTTAAAATCAAAGTTTGTAC-TTAAATAAGACAT-CATTGATTCT
* * * *
215349 TGCTAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCATTTCATTAGGATACATA
64 CGCAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATT-ATTTCATTAGGATACATG
* *
215414 ACATTGACGCTTTGGTGTCGCAAGAGAAA
128 ACATTGATGCTTTGGTGTCGCAAGAGAAG
* ** * ** * * * * * ** * **
215443 CTTTTCTTT-CCACCGTTATTGATAGAATCAAAG-TTGTCCCTTAGATACGAAAAAAATGAAAGC
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCAAAGTTTGT-ACTTAAATAAGACATCATTG-ATTC
** * * * * * * * * *
215506 TCATACTAA-TCTGCATTCCTTTCATGATTAGGCACCATAAACATAGTCTTCTCA-TAGGGATAC
63 TCGCA-AAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTATT-TCATTA-GGATAC
* * * * *
215569 ATGATC-TTGACGCTTTGGTTTCGCAGGATACG
125 ATGA-CATTGATGCTTTGGTGTCGCAAGAGAAG
** * * * * * * **
215601 C-TTTC-TTCCCCATAATTTTT-GTAAAGT-ATGAGTTCAT-TGCTCAAATAAGACAAACACAGA
1 CTTTTCTTTGTCC-T-ATTTTTCTTAAAATCA-AAGTT--TGTACTTAAATAAGAC-ATCATTGA
* * ** * ** ** * *** * * *
215661 TTCTTG-TAGGGATCTTCATTCACTTCGTGATTAGGCACTTTAAACACATTCTCCTCCTTAGGAT
60 TTCTCGCAAAAG-TCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTAT-TTCATTAGGAT
* * * * ** * * ** *
215725 AAATGATAGTT-ACGGTTTTCTTTTGCTTG-GAAAT
123 ACATGACA-TTGATGCTTTGGTGTCGCAAGAG-AAG
* * *
215759 CTTTTCTTTATCACT-TTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTC
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCAAAGTTTGTAC-TTAAATAAGACAT-CATTGATTC
* * *
215823 TTGCAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAACACATTCATTTCATTAGGATACAT
63 TCGCAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATT-ATTTCATTAGGATACAT
215888 GACATTGATGCTTTGGTGTCGCAAGAGAAG
127 GACATTGATGCTTTGGTGTCGCAAGAGAAG
* * * ** * * * * *
215918 CTTTTCTTT-CCACGATTATTGATAGAATCAAAG-TTGTCTCTTAAATAAAACA-AATATGAATA
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCAAAGTTTGT-ACTTAAATAAGACATCAT-TG-ATT
** * * * * * * * * * *
215980 CTCATACTAA-TC-CATATTC-CTTCAGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATA
62 CTCGCA-AAAGTCTC-CATTCTTTTCAAGATTAGGAACCAAAAACACATTATT-TCATTAGGATA
* * *
216042 CATGATC-TTGATGCTTTGGCT-TCGCAGGATACG
124 CATGA-CATTGATGCTTTGG-TGTCGCAAGAGAAG
** * * * * * * * * * *
216075 -TTTT-TTTCCCCACAATTTTT-GTAAAGT-ATGAGTTCTTTGCTCAAATGAGACAAACATAGAT
1 CTTTTCTTT-GTC-CTATTTTTCTTAAAATCA-AAGTT-TGTACTTAAATAAGAC-ATCATTGAT
* * ** * * * *** * *** * * *
216136 TCTTG-TAGGGACCTTCATTCATTTCGTTATTAGGCACTGTAAACACATTCTCCTCTTTAGGATA
61 TCTCGCAAAAG-TCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTAT-TTCATTAGGATA
* * * ** * * * *
216200 AATGATAGTT-ATGGTTTTCTTTTGCTTAGA-AAT
124 CATGACA-TTGATGCTTTGGTGTCGC-AAGAGAAG
* * *
216233 CTTTTCTTTATCACT-TTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTC
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCAAAGTTTGTAC-TTAAATAAGACAT-CATTGATTC
* * * * *
216297 TTGCAAAAGTCTCCATTCTTTCCATGATTGGGAACCAAAAACACATTCATTTCATCAGGATACAT
63 TCGCAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATT-ATTTCATTAGGATACAT
* *
216362 GACATTGATGCTTTGGTGTCGCAACAGAAA
127 GACATTGATGCTTTGGTGTCGCAAGAGAAG
* ** * ** * * * * * *
216392 CTTTTCTTT-CCACCGTTATTGATAGAATCAAAG-CTGTCTCTTAAATAAGGCA-AATATGAATA
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCAAAGTTTGT-ACTTAAATAAGACATCAT-TG-ATT
** * * * * * * * * * *
216454 CTCATACTAA-TC-CACATTC-CTTCAGGATTAGGCACCATATACATAGTCTTCTCATAAGGATA
62 CTCGCA-AAAGTCTC-CATTCTTTTCAAGATTAGGAACCAAAAACACATTATT-TCATTAGGATA
* * * * * *
216516 CAGGATC-TTGATGCTTTGGTTTCACAGGATACG
124 CATGA-CATTGATGCTTTGGTGTCGCAAGAGAAG
*** * * ** * * * * * *
216549 -TTTTCTTCCCACCAATTTTT-GTAAGGT-ATGAGTTCAT-TGCTCAAATGAGACAAACATGGAT
1 CTTTTCTT-TGTCCTATTTTTCTTAAAATCA-AAGTT--TGTACTTAAATAAGAC-ATCATTGAT
* * ** * * ** * * * *
216610 TCTTG-TAGGGATCTTCATTCATTTCGTGATTA-GATACTATAAACACATTCTCCTT-TTTAGGA
61 TCTCGCAAAAG-TCTCCATTCTTTTCAAGATTAGGA-ACCAAAAACACATTAT--TTCATTAGGA
* * * * ** * * * *
216672 TAAATGATATTTATGGTTTTCTTTTGCATG-GAAAT
122 TACATGACATTGATGCTTTGGTGTCGCAAGAG-AAG
* * * *
216707 CTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTCTAAATGAGACATGCGTTGATTCT
1 CTTTTCTTTGTCCTATTTTTCTTAAAATCAAAGTTTGTACT-TAAATAAGACAT-CATTGATTCT
* * *
216772 CGCAAAAGTCTCCATTCTTTTCAAGATTTGGAACCAAAAAAACATTCTTTTCATTAGGATACATG
64 CGCAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATT-ATTTCATTAGGATACATG
216837 ACATTGATGCTTTGGTGTCGCAAGAGAAG
128 ACATTGATGCTTTGGTGTCGCAAGAGAAG
* * ** ** * * * * ** * *
216866 CTTTTCTTT-CCACCATTACTGATAGAACCAAAG-TTG-ACTCTTAAATACGAAAAAAATGAATG
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCAAAGTTTGTA--CTTAAATAAGACATCATTG-ATT
** * * * * * * * * * * *
216928 CTCATACTAA-TCCCCTTTCCTTTCATGATTAGGCACCATAAACATAGTCTTCTCATAAGGATAC
62 CTCGCA-AAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTATT-TCATTAGGATAC
* * * * *
216992 ATGATC-TTGATGCTTTGGTTTCGTAGGATACG
125 ATGA-CATTGATGCTTTGGTGTCGCAAGAGAAG
*** * * * ** * * * * * *
217024 CTTTT-TTCCCCACCATTTTT-GT-AAAGCATGCGTTCTTTGCTCAAATGAGACAAACATGGATT
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCA-AAGTT-TGTACTTAAATAAGAC-ATCATTGATT
* ** * * ** * * * *
217086 CT--TATAGGGATCTTCATTCATTTCGTGATTAGGTA-CAATAAACACATTCTCCTCTTTAGGAT
62 CTCGCA-AAAG-TCTCCATTCTTTTCAAGATTAGGAACCAA-AAACACATTAT-TTCATTAGGAT
* * * * ** * * * *
217148 AAATGATATTTATGGTTTTCTTTAGCATG-GAAAT
123 ACATGACATTGATGCTTTGGTGTCGCAAGAG-AAG
* * * * * * *
217182 CTTTTCTTTGTCATATTTTCCTTAAAATCAAGGTTTGTATTTTAAATGAGGCATGCGTTGATTCT
1 CTTTTCTTTGTCCTATTTTTCTTAAAATCAAAGTTTGTA-CTTAAATAAGACAT-CATTGATTCT
* * *
217247 CGCAAAAGTCTCCATTCTTTTCAAGATTTGGAACCAAAAAAACATTCTTTTCATTAGGATACATG
64 CGCAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATT-ATTTCATTAGGATACATG
217312 ACATTGATGCTTTGGTGTCGCAAGAGAAG
128 ACATTGATGCTTTGGTGTCGCAAGAGAAG
* * ** ** * * * * ** * *
217341 CTTTTCTTT-CCACCATTACTGATAGAACCAAAG-TTGTCTCTTAAATACGGA-AAAAATGAATG
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCAAAGTTTGT-ACTTAAATA-AGACATCATTG-ATT
* ** * * * * * * * * * *
217403 GTCATACTAA-TCCCCATTCCTTTCAAGATTAGGCACCATAAACATAATCTTCTCATAAGGATAT
62 CTCGCA-AAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTATT-TCATTAGGATAC
* * * * * * *
217467 ATGACCTTGGTTCTTTGGTTTCGCAGGATACG
125 ATGACATTGATGCTTTGGTGTCGCAAGAGAAG
*** * * * * * * * *
217499 C-TTTCTTCCCACCAATTTTT-GTAAAGT-ATGAGTTCAT-TGCTCAAATGAA-ACAAACATGGA
1 CTTTTCTT-TGTCCTATTTTTCTTAAAATCA-AAGTT--TGTACTTAAAT-AAGAC-ATCATTGA
** * * * ** * * * *
217559 TTCTTAC-AGAGATCTTCATTCATTTCGTGATTAGG--CGTAATAAACACATTATTCTCCTCAAG
60 TTCTCGCAAAAG-TCTCCATTCTTTTCAAGATTAGGAAC-CAA-AAACACATTATT-TCATTAGG
** * * ** * * ** *
217621 ACGCATGATATTGATGGTTTTCTTTTGCGTGA-AAT
121 ATACATGACATTGATGCTTTGGTGTCGCAAGAGAAG
* * * * *
217656 CTTTTCTTTG-CCTCACTTTCCTTAAAATCAAAGTTTGTATTTTAAATTAGGCATGCATTGATTC
1 CTTTTCTTTGTCCT-ATTTTTCTTAAAATCAAAGTTTGTA-CTTAAATAAGACAT-CATTGATTC
* * * *
217720 TCGTAAAAGTCTCCATTCTTTCCTAGATT-GGAAACCAAAAACACATTCTCTTCATTAGGATACA
63 TCGCAAAAGTCTCCATTCTTTTCAAGATTAGG-AACCAAAAACACATTAT-TTCATTAGGATACA
217784 TGACATTGATGCTTTGGTGTCGCAAGAGAAG
126 TGACATTGATGCTTTGGTGTCGCAAGAGAAG
* * ** * * * * * * **
217815 CTTTTC-TT-TCCAACGTAATCAATAAAATTGAAA-TTTGTTTCCTAAATAGGACA-AAGAGGAA
1 CTTTTCTTTGTCCTA-TTTTTC-TTAAAA-TCAAAGTTTG-TACTTAAATAAGACATCA-TTG-A
* * * * * * * * *
217876 TACTCACACTAA-TC-CCATTCTTTTCAGGATTAGGCACCATAAACA-ATGTCTTCTAATAAGGA
60 TTCTCGCA-AAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACAT-TATT-TCATTAGGA
* * * *
217938 TAAATGATATTGATGCTTTGGTTTCGC--GAGAAA
122 TACATGACATTGATGCTTTGGTGTCGCAAGAGAAG
* *** * * * * * ** * * * *
217971 CACTTTCTTCCCACCAATTTTT-GTAAATTCAAA-TTTCCTGCCCCAAATGAGAAAAACATGGAT
1 C-TTTTCTT-TGTCCTATTTTTCTTAAAATCAAAGTTT-GT-ACTTAAATAAG-ACATCATTGAT
* * * * * * * * * * *
218034 TCTAG-TAAGGATCTTCATCCATTTCATGATTAGGCACCATAAACACATTCTTCTTATTAGGATA
61 TCTCGCAAAAG-TCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTATT-TCATTAGGATA
* * * * ** * * ** *
218098 AATGATATTCATGTTTTTCTTTAGCGTG-GTAAT
124 CATGACATTGATGCTTTGGTGTCGCAAGAG-AAG
* * *
218131 CTTTTCTTTG-CCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAACAAGACCTGCATTGATTC
1 CTTTTCTTTGTCC-TATTTTTCTTAAAATCAAAGTTTGTAC-TTAAATAAGACAT-CATTGATTC
* * * * * * *
218195 CCGTAAAAGTCTCCATTTTTTTCAAGATTGGGAACCAAAATCACA-TACCCTTCCTTAGGATACA
63 TCGCAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTA--TTTCATTAGGATACA
* *
218259 AGACATTGATGCTGTGGTGTCGCAAGAGAAG
126 TGACATTGATGCTTTGGTGTCGCAAGAGAAG
* *** * * ** * * * *
218290 CTATTC-TACACACCATTATTGATAGAATCAAAG-TTGTCCCTTAAATAAGACA-AATATGAATA
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCAAAGTTTGT-ACTTAAATAAGACATCAT-TG-ATT
** * * * * * * * * * *
218352 CTCATACTAA-TCCCCATTCCTTTCAAGATTAGGCACCATAAACATAATCTTCTCATAAGGATAT
62 CTCGCA-AAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTATT-TCATTAGGATAC
* * * * * * * *
218416 ATGACCTTGGTACTTTGGTTTCGTAGGATACG
125 ATGACATTGATGCTTTGGTGTCGCAAGAGAAG
* *** * * * * * * * * *
218448 -GTTTCTTCCCACCAATTTTT-GTAAAGT-ATGAGTTAAT-TGCTCAAATGAGACAAACATGGAT
1 CTTTTCTT-TGTCCTATTTTTCTTAAAATCA-AAGTT--TGTACTTAAATAAGAC-ATCATTGAT
* * ** * * * ** * * * * *
218509 TCTTG-TAGGGACCTTCATTCATTTCGTGATTAGGCACTATAAACACATT-CTCCTATTTAGGAT
61 TCTCGCAAAAG-TCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTATTTC-A-TTAGGAT
* * * * ** * * * *
218572 AAATGATATTTATGGTTTTCTTTTGCATG-GAAAT
123 ACATGACATTGATGCTTTGGTGTCGCAAGAG-AAG
* * * *
218606 CTTTTCTTTGTCTTATTTTCCTTAAAATCAAAGTTTATACTTTAAATGAGACATGCATTGATTCT
1 CTTTTCTTTGTCCTATTTTTCTTAAAATCAAAGTTTGTAC-TTAAATAAGACAT-CATTGATTCT
*
218671 CGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTAATTTCATTAGGATACATG
64 CGCAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATT-ATTTCATTAGGATACATG
218736 ACATTGATGCTTTGGTGTCGCAAGAGAAG
128 ACATTGATGCTTTGGTGTCGCAAGAGAAG
* * ** * * * **
218765 CTTTTCTTTCTACC-ATTATTGATAGAATCAAA-ATTGTCACTTAAATAAGACA-AATATGAAAA
1 CTTTTCTTTGT-CCTATTTTTCTTAAAATCAAAGTTTGT-ACTTAAATAAGACATCAT-TG-ATT
* ** * * * * ** * *
218827 ATCATACTAA-TC-CACATTCCTTTCAGGATTAGGCACCATCAACATAGTT-TTCTCATAAGGAT
62 CTCGCA-AAAGTCTC-CATTCTTTTCAAGATTAGGAACCAAAAACACA-TTATT-TCATTAGGAT
* * * *
218889 ACATGATC-TTGATGCTTTGGTCTTGCAAGATACG
123 ACATGA-CATTGATGCTTTGGTGTCGCAAGAGAAG
*** * * * * * * * * *
218923 C-TTTCTTCCCACCAATTTTT-GTAAAGT-ATGAGTTTGTTGCTCAAATGAGACAAACATGGATT
1 CTTTTCTT-TGTCCTATTTTTCTTAAAATCA-AAGTTTG-TACTTAAATAAGAC-ATCATTGATT
* * ** * ** * * * * * * *
218985 CTTGC-AAGGATCTTTATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAA
62 CTCGCAAAAG-TCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTAT-TTCATTAGGATAC
* * * ** * * *
219049 ATGATATTTATGATTTTCTTTTC-CATG-GAAAT
125 ATGACATTGATG-CTTTGGTGTCGCAAGAG-AAG
* * * * * *
219081 CTTTTCTTTGTCTTTTTTTTCTTAAAATCAAAGTTTGTATTTTAAATGAGGCATGCGTTGATTCT
1 CTTTTCTTTGTCCTATTTTTCTTAAAATCAAAGTTTGTA-CTTAAATAAGACAT-CATTGATTCT
* * *
219146 CGTAAAAGTCTTCATTCTTTTCAAGATT-GGCAACCAAAAACACATTAATTTCATTAGGATGCAT
64 CGCAAAAGTCTCCATTCTTTTCAAGATTAGG-AACCAAAAACACATT-ATTTCATTAGGATACAT
219210 GACATTGATGCTTTGGTGTCGCAAGAGAAG
127 GACATTGATGCTTTGGTGTCGCAAGAGAAG
* * * ** * * * * **
219240 CTTTTCTTT-CCACCATTATTGATAGATTCAAAG-TTGTCTCTTAAATAAGACAAACA-TGAAAA
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCAAAGTTTGT-ACTTAAATAAGAC-ATCATTG-ATT
** * * ** * ** * *** *
219302 CTCATACTAA-TCCCCATTCTTTTCGGGATTAGGCACCGTAAACATAGCCTTCTCATAAGGATAC
62 CTCGCA-AAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTATT-TCATTAGGATAC
* * * *
219366 ATGATC-TTGATGCTTTGGTTTCACAGGAGACG
125 ATGA-CATTGATGCTTTGGTGTCGCAAGAGAAG
*** * * ** * * * * * **
219398 C-TTTCTTCCCACCAATTTTT-GTAAGGT-ATGAGTTCAT-TGCTCAAATGAGACAAACACGGAG
1 CTTTTCTT-TGTCCTATTTTTCTTAAAATCA-AAGTT--TGTACTTAAATAAGAC-ATCATTGA-
* * ** * ** * * * * * * * *
219459 TT-TTG-TAGGGATCTTCATTCATTTT-GTGATTAGGCACTATAAGCATATTCTCCTCTTTAGGA
60 TTCTCGCAAAAG-TCTCCATTC-TTTTCAAGATTAGGAACCAAAAACACATTAT-TTCATTAGGA
* * * * ** * * * *
219521 TAAATGATATTTATGGTTTTCTTTTGCATG-GAAAT
122 TACATGACATTGATGCTTTGGTGTCGCAAGAG-AAG
* * *
219556 CTTTTCTTTGTCATATTTTTCTTAAAATCAAAGTTTGTGCTTTAAATGAGACATGCATTGATTCT
1 CTTTTCTTTGTCCTATTTTTCTTAAAATCAAAGTTTGTAC-TTAAATAAGACAT-CATTGATTCT
* * * *
219621 CGCAAAAGTCTCCATTTTTTTCAAGATTGGGAACCAAAAAGACATTAATTTCATTAGGATACAAG
64 CGCAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATT-ATTTCATTAGGATACATG
*
219686 ACATTGATGCTTTGGTGTCGCAAAAGAAG
128 ACATTGATGCTTTGGTGTCGCAAGAGAAG
* * * ** * * * *
219715 CTTTTCTTT-CCACCATTATTGATAGATTCAAAG-TTGTCACTTAAATAAGACA-AATATGAATA
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCAAAGTTTGT-ACTTAAATAAGACATCAT-TG-ATT
* ** * * * * ** * * *
219777 ATCATACTAA-TC-CACATTCCTTTCAGGATTAGGCACCATCAACA-TTGTCTTCTCATAAGGAT
62 CTCGCA-AAAGTCTC-CATTCTTTTCAAGATTAGGAACCAAAAACACAT-TATT-TCATTAGGAT
* * * *
219839 ACATGATC-TTGATGCTTTGGTTTTGCAAGATACG
123 ACATGA-CATTGATGCTTTGGTGTCGCAAGAGAAG
** * * ** * * * * * * * *
219873 C-TTTC-TTCCCACCAATTTTGGTAAAGT-ATGAGTTTATTGCTCAAATGAGACAAACATGGATT
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCA-AAGTTT-GTACTTAAATAAGAC-ATCATTGATT
*** ** * ** * * * *
219935 CAT-GC-GGGGATCTTTATTCATTTCGTGATTAGGCACTATAAACACATT-TTCCTCTTTAGGAT
62 C-TCGCAAAAG-TCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTATT--TCATTAGGAT
* * * * ** * * *
219997 AAATGATATTTATGGTTTTCTTTTC-CATG-GAAAT
123 ACATGACATTGAT-GCTTTGGTGTCGCAAGAG-AAG
* * * *
220031 CTTTTCTTTGTCTTATTTTTCTTAAAATCAAAGTTTGTATTTTAAATGACG-CATGCGTTGATTC
1 CTTTTCTTTGTCCTATTTTTCTTAAAATCAAAGTTTGTA-CTTAAAT-AAGACAT-CATTGATTC
* *
220095 TCGCAAAAGTCTCCATTCTTTTCAAGTTTGGGAACCAAAAACACATTAATTTCATTAGGATACAT
63 TCGCAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATT-ATTTCATTAGGATACAT
220160 GACATTGATGCTTTGGTGTCGCAAGAGAAG
127 GACATTGATGCTTTGGTGTCGCAAGAGAAG
* * * ** * * * * **
220190 CTTTTCTTT-CCACCATTATTGATAGAATGAAAG-TTGTCTCTTAAATAAGACAAACA-TGAAAA
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCAAAGTTTGT-ACTTAAATAAGAC-ATCATTG-ATT
** * * ** * * * *** * *
220252 CTCATACTAA-TCCCCATTCTTTTCGGGATTAGGCACCATAAACATAGCCTTCTTATAAGGATAC
62 CTCGCA-AAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTATT-TCATTAGGATAC
* * * *
220316 ATGATC-TTGATGCTTTGGTTTCACAGGAGACG
125 ATGA-CATTGATGCTTTGGTGTCGCAAGAGAAG
* *** * * ** * * * * * **
220348 GTTTT-TTCCCACCAATTTTT-GTAAGGT-ATGAGTTCAT-TGCTCACAA-GAGACAAACACAGA
1 CTTTTCTT-TGTCCTATTTTTCTTAAAATCA-AAGTT--TGTACTTA-AATAAGAC-ATCATTGA
* * * ** * * ** * * * * * * * *
220408 TTTTTG-TAGGGATCTTCATTCATTTCGTGATTAGGCACTATAAGCATATTCTCCTCTTTAGGAT
60 TTCTCGCAAAAG-TCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTAT-TTCATTAGGAT
* * * * ** * * * *
220472 AAATGATATTTATGGTTTTCTTTTGCATG-GTAAT
123 ACATGACATTGATGCTTTGGTGTCGCAAGAG-AAG
* * * *
220506 CTTTTCTTTGTCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGACATGCGTTGATTCT
1 CTTTTCTTTGTCCTATTTTTCTTAAAATCAAAGTTTGTAC-TTAAATAAGACAT-CATTGATTCT
*
220571 CGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTAATTTCATTAGGATACATG
64 CGCAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATT-ATTTCATTAGGATACATG
220636 ACATTGATGCTTTGGTGTCGCAAGAGAAG
128 ACATTGATGCTTTGGTGTCGCAAGAGAAG
* * * ** * * * *
220665 CTTTTCTTT-CCACCATTATTGATAGAATCAAA-ATTGTCACTTAAATAAGACA-AATATGAATA
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCAAAGTTTGT-ACTTAAATAAGACATCAT-TG-ATT
* ** * * * * ** * * * *
220727 ATCATACTAA-TC-CACATTCCTTTCAGGATTAGGCACCATCAACACAGTCTTCTCATAAAGATA
62 CTCGCA-AAAGTCTC-CATTCTTTTCAAGATTAGGAACCAAAAACACATTATT-TCATTAGGATA
* * * * *
220790 CATGATC-TCGATGCTTTGGTTTTGCAAGATACG
124 CATGA-CATTGATGCTTTGGTGTCGCAAGAGAAG
*** * * * * * * * * * * *
220823 C-TTTCTTCCCACCAATTTTT-GTAAAGT-ATGAGTTTATTGCTCAATTGAGACAAACATGGATT
1 CTTTTCTT-TGTCCTATTTTTCTTAAAATCA-AAGTTT-GTACTTAAATAAGAC-ATCATTGATT
** ** * ** * * * * *
220885 CAT-GC-AGGGATCTTTATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATA
62 C-TCGCAAAAG-TCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTAT-TTCATTAGGATA
* * * * ** * * *
220948 AATGATATTTATGGTTTTCTTTTC-CATG-GAAAT
124 CATGACATTGAT-GCTTTGGTGTCGCAAGAG-AAG
* * *
220981 CTTTTCTTTGTCTTTTTTTTCTTAAAATCAAAGTTTGTACTTTAAATAAGACATCCGTTGATTCT
1 CTTTTCTTTGTCCTATTTTTCTTAAAATCAAAGTTTGTAC-TTAAATAAGACAT-CATTGATTCT
*
221046 CGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTAATTTCATTAGGATACATG
64 CGCAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATT-ATTTCATTAGGATACATG
221111 ACATTGATGCTTTGGTGTCGCAAGAGAAG
128 ACATTGATGCTTTGGTGTCGCAAGAGAAG
* * * ** * * * *
221140 CTTTTCTTT-CCACCATTATTGATAGAATCAAAG-TTGTCTCTTCAAATAAGACAAACA-TGAAA
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCAAAGTTTGT-ACTT-AAATAAGAC-ATCATTG-AT
* ** * * ** * * * *** *
221202 ACTCATACTAA-TCCCCATTCTTTTCGGGATTAGGCACCATAAACATAGCCTTCTCATAAGGATA
61 TCTCGCA-AAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTATT-TCATTAGGATA
* * *
221266 CATGATC-TTGATGCTTTGGTTTCACAAGAGACG
124 CATGA-CATTGATGCTTTGGTGTCGCAAGAGAAG
*** * * ** * * * * * *
221299 C-TTTCTTCCCACCAATTTTT-GTAAGGT-ATGAGTTCAT-TGCTCAAATGAGACAAACA-CGAA
1 CTTTTCTT-TGTCCTATTTTTCTTAAAATCA-AAGTT--TGTACTTAAATAAGAC-ATCATTG-A
* * * ** * * ** * * * * * * * *
221359 TTTTTG-TAGGGATCTTCATTCATTTCGTGATTAGGCACTATAAGCATATTCTCCTCTTTAGGAT
60 TTCTCGCAAAAG-TCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTAT-TTCATTAGGAT
* * * * ** * * * *
221423 AAATGATATTTATGGTTTTTTTTTGCATG-GAAAT
123 ACATGACATTGATGCTTTGGTGTCGCAAGAG-AAG
* * * *
221457 CTTTTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTGCTTTAAATGAGACATGCATTGATTCT
1 CTTTTCTTTGTCCTATTTTTCTTAAAATCAAAGTTTGTAC-TTAAATAAGACAT-CATTGATTCT
* * *
221522 CGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAAAACATTCCTTTCATTAGGATACATG
64 CGCAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATT-ATTTCATTAGGATACATG
221587 ACATTGATGCTTTGGTGTCGCAAGAGAAG
128 ACATTGATGCTTTGGTGTCGCAAGAGAAG
** * * * * ** *
221616 CTTTTC-TT-TCC-ATCGTTATTGATAGAACCAAAG-TTGTCTCTTAAATAAGGCAAAATTAAAT
1 CTTTTCTTTGTCCTAT--TT-TTCTTAAAATCAAAGTTTGT-ACTTAAATAAGACATCATT-GAT
* ** * * * * * * * * *
221677 ACTCATACTAA-TCCCCATTTCTTTT-AGGATTAGGCACCATAAACATAGTCTTCTCATAAGGAT
61 TCTCGCA-AAAGTCTCCA-TTCTTTTCAAGATTAGGAACCAAAAACACATTATT-TCATTAGGAT
* * * *
221740 ACATGATC-TTGATGCTTTGGTTTCACAGGAGACG
123 ACATGA-CATTGATGCTTTGGTGTCGCAAGAGAAG
*** * * ** * * * * * **
221774 C-TTTCTTCCCACCAATTTTT-GTAAGGT-ATGAGTTCAT-TGCTCAAATGAGACAAACACGGAT
1 CTTTTCTT-TGTCCTATTTTTCTTAAAATCA-AAGTT--TGTACTTAAATAAGAC-ATCATTGAT
* * * ** * * ** * ** * * *
221835 TTTTG-TAGGGATCTTCATTCATTTCGTGATTAGGCATTATAAACACATTCTCCTC-TTCAGGAT
61 TCTCGCAAAAG-TCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTAT-TTCATT-AGGAT
* * * * ** * * * *
221898 AAATGATATTTATGGTTTTCTTTTGCATG-GAAAT
123 ACATGACATTGATGCTTTGGTGTCGCAAGAG-AAG
* * * *
221932 CTTTTCTTTGTCTTATTTTCCTCAAAATCAAAGTTTCTACTTTAAATAAGACATGCATTGATTCT
1 CTTTTCTTTGTCCTATTTTTCTTAAAATCAAAGTTTGTAC-TTAAATAAGACAT-CATTGATTCT
** * * ** * * *
221997 CATAAAAGTCTCCATTCTTTTCAACATTGGGAATTAAAAACACATTCCCTTT-TTTAGGATACAA
64 CGCAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATT--ATTTCATTAGGATACAT
* * ***
222061 GACATTGATGTTTTAGTGGAACAAGAGAAG
127 GACATTGATGCTTTGGTGTCGCAAGAGAAG
* * * ** * * * *
222091 CTTTTCTTT-CCACTCTTATTGATAGAATCAAAGTTTCT-CTCTCAAATAAGACAAACA-CGAAT
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCAAAGTTTGTACT-T-AAATAAGAC-ATCATTG-AT
* * * * * * * * * * *
222153 ACTCACACTAA-TC-CACATTCTTTTCTAGATTAGGCACCATAAACAAAGTCTTCTAATAAGGAT
61 TCTCGCA-AAAGTCTC-CATTCTTTTCAAGATTAGGAACCAAAAACACATTATT-TCATTAGGAT
* * *
222216 ACATGATATTGATGCTTTGGTTTCACAAGA-AA-
123 ACATGACATTGATGCTTTGGTGTCGCAAGAGAAG
* *** * * * * * ** * * * **
222248 CACTTTCTTCCCACCAATTTTT-GTAAATTCTAA-TTTGGAGCCCCAAATGAGAAAAGCAAGGAT
1 C-TTTTCTT-TGTCCTATTTTTCTTAAAATCAAAGTTTGTA--CTTAAATAAG-ACATCATTGAT
* * * * * * ** * * * * *
222311 TCTAG-TAAGGATCTTCATCCATTTCTTGATTAGGCACTATAAACACATTCTTCTTATTAGGATA
61 TCTCGCAAAAG-TCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTATT-TCATTAGGATA
* * ** * ** * ** *
222375 AATGATATTCTTGGTTTTCTTTCGCGTG-GCAAT
124 CATGACATTGATGCTTTGGTGTCGCAAGAG-AAG
* * * *
222408 TTTTTCTTTG-CCTTATTTTCCTTAAAATTAAAGTTTGTACTTTAAATAAGACCTGCATTGATTC
1 CTTTTCTTTGTCC-TATTTTTCTTAAAATCAAAGTTTGTAC-TTAAATAAGACAT-CATTGATTC
* * * * * * *
222472 CCGTAAAAGTCTCCATTTTTTTCAAGATTGGGAACCAAAATCACA-AACCCTTCATTAGGATACA
63 TCGCAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTA--TTTCATTAGGATACA
* * * *
222536 AGACATTGATGCTGTGGTGTCTCAAGTGAAG
126 TGACATTGATGCTTTGGTGTCGCAAGAGAAG
* ** * * ** * ** * * *
222567 CTGTTCTCCG-CACCATTATTGATAGAATCAAAG-TTGCCCCTTAAAGAAGACA-AATATGAATA
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCAAAGTTTG-TACTTAAATAAGACATCAT-TG-ATT
** * * * * * * * * * *
222629 CTCATACTAA-TCCCCATTCCTTTCAAGATTAGGCACCATAAACATAATCTTCTCATAAGGATAT
62 CTCGCA-AAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTATT-TCATTAGGATAC
* * ** * * * * *
222693 ATGACCTTGGTATTTTGGTTTCGTAGGATATG
125 ATGACATTGATGCTTTGGTGTCGCAAGAGAAG
*** * * * * * * * * *
222725 C-TTTCTTCCCACCAATTTTT-GTAAAGT-ATGAGTTCAT-TGCTCAAATGAGACAAACATGGAT
1 CTTTTCTT-TGTCCTATTTTTCTTAAAATCA-AAGTT--TGTACTTAAATAAGAC-ATCATTGAT
* * ** * * * ** * * * * * * *
222786 TCTTG-TAGGGACCTTCATTCATTTCGTGATTAGGCACTATAAACGCATTCTCCTCTTTAGGATT
61 TCTCGCAAAAG-TCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTAT-TTCATTAGGA-T
* * * ** * * * *
222850 A-ATGATATTTATGGTTTTCTTTTGCATG-GAAAT
123 ACATGACATTGATGCTTTGGTGTCGCAAGAG-AAG
* * * *
222883 CTTTTCTTTGTCTTATTTTTATTAAAATCAAAGTTTGTACTTTAAATGAGACATGCGTTGATTCT
1 CTTTTCTTTGTCCTATTTTTCTTAAAATCAAAGTTTGTAC-TTAAATAAGACAT-CATTGATTCT
* * *
222948 CGCAAAAGTCTCCATTCTTTTCAGGATTGGGAACCAAAAACACATTAATTTCATTACGATACATG
64 CGCAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATT-ATTTCATTAGGATACATG
*
223013 ACATTGATGCTTTGGTGTCGCAAGAGACG
128 ACATTGATGCTTTGGTGTCGCAAGAGAAG
** * ** * * *
223042 CTTTTCTTTCAACC-ATTATTGATAGAATCAAAG-TTGTCACTTAAATAAGACA-AATATGAATA
1 CTTTTCTTT-GTCCTATTTTTCTTAAAATCAAAGTTTGT-ACTTAAATAAGACATCAT-TG-ATT
* ** * * * * * * * *
223104 ATCATACTAA-TC-CACATTCCTTTCAAGATTAGGCACCATAAACATAGTCTTCTCATAAGGATA
62 CTCGCA-AAAGTCTC-CATTCTTTTCAAGATTAGGAACCAAAAACACATTATT-TCATTAGGATA
* * ** *
223167 CATGATC-TTGATGCTTTGGTTTTGCAAGTTACG
124 CATGA-CATTGATGCTTTGGTGTCGCAAGAGAAG
** * * * * * * * * *
223200 -TTTTCTTCCCTCCAATTTTT-GTAAAGT-ATGAGTTCAT-TGCTCAAATGAGACAAACATGGAT
1 CTTTTCTT-TGTCCTATTTTTCTTAAAATCA-AAGTT--TGTACTTAAATAAGAC-ATCATTGAT
* * ** * * * * * * * * *
223261 TCTTG-TAGGGACCTTCATTCATTTCATGATTAGGCACTATAAACACATT-TCCCTCTTTAGGAT
61 TCTCGCAAAAG-TCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTAT--TTCATTAGGAT
* * * * * * * *
223324 AAACGATATTTATGCTTT-CTTTTGCATAGA-AAT
123 ACATGACATTGATGCTTTGGTGTCGCA-AGAGAAG
* * * * * *
223357 CTTTTCTTTGTCATA-TTTTCCTAAAATCAAAGTTTGTATTTTAAATGAGGCATGCGTTGATTCT
1 CTTTTCTTTGTCCTATTTTTCTTAAAATCAAAGTTTGTA-CTTAAATAAGACAT-CATTGATTCT
*
223421 CGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTAATTTCATTAGGATACATG
64 CGCAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATT-ATTTCATTAGGATACATG
*
223486 ACATTGATGCTTTGGTGTCGCAAAAGAAG
128 ACATTGATGCTTTGGTGTCGCAAGAGAAG
* * * ** * * * * **
223515 CTTTTCTTT-CCACCATTATTGATAGAATGAAAG-TTGTCTCTTAAATAAGACAAACA-TGAAAA
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCAAAGTTTGT-ACTTAAATAAGAC-ATCATTG-ATT
** * * * * ** * * * * *
223577 CTCATACTAA-TCCCCATTCTTTTCAGGATTAGGCACCATCAACATAGTCTTCTCATAAAGATAC
62 CTCGCA-AAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTATT-TCATTAGGATAC
* * * * *
223641 ATGATC-TCGATGCTTTGGTTTTGCAAGATACG
125 ATGA-CATTGATGCTTTGGTGTCGCAAGAGAAG
*** * * * * * * * * * * *
223673 C-TTTCTTCCCACCAATTTTT-GTAAAGT-ATGAGTTTATTGCTCAAATGAGGCAAACATGGATT
1 CTTTTCTT-TGTCCTATTTTTCTTAAAATCA-AAGTTT-GTACTTAAATAAGAC-ATCATTGATT
** ** * ** * * * * *
223735 CAT-GC-AGGGATCTTTATTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATA
62 C-TCGCAAAAG-TCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTAT-TTCATTAGGATA
* * * * ** * * *
223798 AATGATATTTATGGTTTTCTTTTC-CATG-GAAAT
124 CATGACATTGAT-GCTTTGGTGTCGCAAGAG-AAG
* * * *
223831 CTTTTCTTTGTCTTTTTTTTCTTAAATTCAAAGTTTGTACTTTAAATAAGACATGCGTTGATTCT
1 CTTTTCTTTGTCCTATTTTTCTTAAAATCAAAGTTTGTAC-TTAAATAAGACAT-CATTGATTCT
*
223896 CGCAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTAATTTCATTAGGATACATG
64 CGCAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATT-ATTTCATTAGGATACATG
*
223961 ACATTGATGCTTTGGTGTCGCAAAAGAAG
128 ACATTGATGCTTTGGTGTCGCAAGAGAAG
* * * ** * * * **
223990 CTTTTCTTT-CCACCATTATTGATAGAATCAAAG-TTGTCTCTTAAATAAGACAAACA-TGAAAA
1 CTTTTCTTTGTC-CTATTTTTCTTAAAATCAAAGTTTGT-ACTTAAATAAGAC-ATCATTG-ATT
** * * ** * * * *** *
224052 CTCATACTAA-TCCCCATTCTTTTCGGGATTAGGCACCATAAACATAGCCTTCTCATAAGGATAC
62 CTCGCA-AAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTATT-TCATTAGGATAC
* * *
224116 ATGATC-TTGATGCTTTGGTTTCACAAGAGACG
125 ATGA-CATTGATGCTTTGGTGTCGCAAGAGAAG
*** * * ** * * * * **
224148 C-TTTCTTCCCACCAATTTTT-GTAAGGT-ATGAGTTCAT-TACTCAAATGAGACAAACACAGAT
1 CTTTTCTT-TGTCCTATTTTTCTTAAAATCA-AAGTT--TGTACTTAAATAAGAC-ATCATTGAT
* * * ** * * * ** * * * * *
224209 TTTTG-TAGGGACCTTCATTCATTTCGTGATTAGGCACTATAAACACATT-TGCCTCTTTAGGAT
61 TCTCGCAAAAG-TCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTAT--TTCATTAGGAT
* * * * * ** * * *
224272 AAACGATATTTATGGTTTTCTTTTGCATAGA-AAT
123 ACATGACATTGATGCTTTGGTGTCGCA-AGAGAAG
* * * * *
224306 CTTTTCTTTGTCATATTTTCCTAAAAATCAAAGTTTGTACTCTAAATGAGACATGCGTTGATTCT
1 CTTTTCTTTGTCCTATTTTTCTTAAAATCAAAGTTTGTACT-TAAATAAGACAT-CATTGATTCT
* *
224371 CGCAAAAGTGTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTAATTTCATTAGGATACATG
64 CGCAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATT-ATTTCATTAGGATACATG
*
224436 ACATTGATTCTTTGGTGTCGCAAGAGAAG
128 ACATTGATGCTTTGGTGTCGCAAGAGAAG
224465 CTTTTCTTT
1 CTTTTCTTT
224474 CCACCATTAT
Statistics
Matches: 14777, Mismatches: 5538, Indels: 3049
0.63 0.24 0.13
Matches are distributed among these distances:
151 3 0.00
152 14 0.00
153 74 0.01
154 8 0.00
155 40 0.00
156 276 0.02
157 1658 0.11
158 7023 0.48
159 5279 0.36
160 380 0.03
161 22 0.00
ACGTcount: A:0.30, C:0.18, G:0.15, T:0.36
Consensus pattern (156 bp):
CTTTTCTTTGTCCTATTTTTCTTAAAATCAAAGTTTGTACTTAAATAAGACATCATTGATTCTCG
CAAAAGTCTCCATTCTTTTCAAGATTAGGAACCAAAAACACATTATTTCATTAGGATACATGACA
TTGATGCTTTGGTGTCGCAAGAGAAG
Found at i:225035 original size:235 final size:235
Alignment explanation
Indices: 224636--225078 Score: 760
Period size: 235 Copynumber: 1.9 Consensus size: 235
224626 TCTTCCCTCC
* * * *
224636 AATTTTTGTAAAGTATGAGTTTATTGCTCAAATGAGACAAACATGGATTATTGCAGGGATCTTTA
1 AATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAGACAAACACGAATTATTGCAGGGATCTTCA
*
224701 TTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTTATTGTTTT
66 TTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTTATGGTTTT
* * * * *
224766 CTTTTGCGTGGAAATCTTTTCTTTGTCTTATTTTCCTTAAAATCGAAGTTTATACTTTAAATGAG
131 CTTTTGCATGGAAATCTTCTCTTTGTCATATTTTCCTTAAAATCAAAGTTTATACTTTAAACGAG
224831 ACATGCATTGATTTTTCGCAGGATACGCTTTCTTCCCCAT
196 ACATGCATTGATTTTTCGCAGGATACGCTTTCTTCCCCAT
*
224871 AATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAGACAAACACGAATTCTTGCAGGGATCTTCA
1 AATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAGACAAACACGAATTATTGCAGGGATCTTCA
224936 TTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTTATGGTTTT
66 TTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTTATGGTTTT
*
225001 CTTTTGCATGGAAATCTTCTCTTTGTCATATTTTCCTTAAAATCAAAGTTTGTACTTTAAACGAG
131 CTTTTGCATGGAAATCTTCTCTTTGTCATATTTTCCTTAAAATCAAAGTTTATACTTTAAACGAG
* *
225066 ACTTGCGTTGATT
196 ACATGCATTGATT
225079 CTCGCAAAAG
Statistics
Matches: 194, Mismatches: 14, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
235 194 1.00
ACGTcount: A:0.28, C:0.16, G:0.15, T:0.41
Consensus pattern (235 bp):
AATTTTTGTAAAGTATGAGTTCATTGCTCAAATGAGACAAACACGAATTATTGCAGGGATCTTCA
TTCATTTCGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTTATGGTTTT
CTTTTGCATGGAAATCTTCTCTTTGTCATATTTTCCTTAAAATCAAAGTTTATACTTTAAACGAG
ACATGCATTGATTTTTCGCAGGATACGCTTTCTTCCCCAT
Found at i:229548 original size:158 final size:156
Alignment explanation
Indices: 226060--252267 Score: 5140
Period size: 158 Copynumber: 165.5 Consensus size: 156
226050 AACACATTAA
* *
226060 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACCATTAT
* * * * ** * *
226125 TGATAGAATCAAAATTGTCACTTAAATAAGACAAATATGAATAATCATACTAATC-CACATTCAT
66 TGATA-AATCAAAGTTGTCTCTTAAATGAGACAAACATG-ATTCTCGTACTAATCTC-CATTCTT
*
226189 TTCAGGATTAGGCACCATCAACATAGT-CT
128 TTCAGGATTAGGCACCATAAACATA-TCCT
* * * * * ** *
226218 TCTCATAAGGATATATGATC-TTGATGCTTTGGTTTTGCAAGATACGC-TTTCTTCCCACCAATT
1 TTTCATTAGGATACATGA-CATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACC-ATT
* * * * * * **
226281 TTTG-TAAAGT-ATGAGTT-TATTGCTCAAATGAGACAAACATGGATTCT--TGCTGGGATCTTT
64 ATTGATAAA-TCA-AAGTTGT-CT-CTTAAATGAGACAAACAT-GATTCTCGTACT--AATCTCC
* ** * *
226341 ATTCATTTC-GTGATTAGGCAGTATAAACACATTCT
122 ATTCTTTTCAG-GATTAGGCACCATAAACATATCCT
** * * ** * * ** * * **
226376 CCTCTTTAGGATAAATGATTTTTATGGTTTTCTTTTC-CATG-GAAATCTTTTCTTTGTC-TTAT
1 TTTCATTAGGATACATGACATTGAT-GCTTTGGTTTCGCAAGAGAAA-CTTTTCTTT-CCACCAT
* ** * **** * *
226438 TTTTCTTAAAATCAAAGTTTGTACT-TTAAATGAGGCATGTGTTGATTCTCGCA-AAAGTCTCCA
63 TATTGAT-AAATCAAAG-TTGT-CTCTTAAATGAGACA-AACATGATTCTCGTACTAA-TCTCCA
* * * * * ***
226501 TTCTTTTCAAGATTGGGAACCAAAAACACATTAA
123 TTCTTTTCAGGATTAGGCACCATAAACATATCCT
** *
226535 TTTCATTAGGATACATGACATTGATGCTTTGGTGACGCAAGAGAAGCTTTTCTTTCCACCATTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACCATTAT
* ** ** *
226600 TGATAGAATCAAAGTTGTCTCTTAAATAAGACAAACATGAAAACTCACACTAATCCCCATTCTTT
66 TGATA-AATCAAAGTTGTCTCTTAAATGAGACAAACATG-ATTCTCGTACTAATCTCCATTCTTT
* *
226665 TCGGGATTAGGCACCATAAACATAGCCT
129 TCAGGATTAGGCACCATAAACATATCCT
* * * * ** *
226693 TCTCATAAGGATACAGGATC-TTGATGCTTTGGTTTCAG-AGGAGACGC-TTTCTTCCCACCAAT
1 TTTCATTAGGATACATGA-CATTGATGCTTTGGTTTC-GCAAGAGAAACTTTTCTTTCCACC-AT
* * * * * * * * *** *
226755 TTTTG-TAAGGT-ATGAGTTCAT-TGGTAAAATGAGACAAACATAGATTTTTGTAGGGATCTTCA
63 TATTGATAA-ATCA-AAGTT-GTCT-CTTAAATGAGACAAACAT-GATTCTCGTACTAATCTCCA
* * * *
226817 TTCATTTC-GTGATTAGGCACTATAAGCATATTCT
123 TTCTTTTCAG-GATTAGGCACCATAAACATATCCT
** * * * * * * * * *
226851 CCTCTTTAGGATAAATGATATTTATGGCTTT-CTTTTGCATG-GAAATCTTTTCTTTGTCA-TAT
1 TTTCATTAGGATACATGACATTGAT-GCTTTGGTTTCGCAAGAGAAA-CTTTTCTTT-CCACCAT
** ** * * *
226913 T-TTCCTTAAAATCAAAGTTTGTGCT-TTAAATGAGACATGCATTGATTCTCGCA-AAAGTCTAC
63 TATT-GAT-AAATCAAAG-TTGT-CTCTTAAATGAGACAAACA-TGATTCTCGTACTAA-TCTCC
* * * * * * ***
226975 ATTCTTTTCAAGATTGGGAACCAAAAAGACATTAA
122 ATTCTTTTCAGGATTAGGCACCATAAACATATCCT
* * * * *
227010 CTTCATTAGGATACATGACATTGATGCTTTCGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTTT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACCATTAT
* * * ** * *
227075 TGATAGAATCAAAGTTGTCACTAAAAT-ATGACAAATATGAATAATCATACTAATC-CACATTCC
66 TGATA-AATCAAAGTTGTCTCTTAAATGA-GACAAACATG-ATTCTCGTACTAATCTC-CATTCT
* *
227138 TTTCCGGATTAGGCACCATCAACATAGT-CT
127 TTTCAGGATTAGGCACCATAAACATA-TCCT
** * * * ** * *
227168 TCCCATAAGGATACATGATC-TTGATGCTTTGGTTTTGCAAGATACGC-TTTCTTCCCAGCAATT
1 TTTCATTAGGATACATGA-CATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCA-CCATT
* * * * * *** **
227231 TTTG-TAAAGT-ATGAGTT-TATTGCTCAAATGAGACAAACATGGATTCTTGTAGGGATCTTTAT
64 ATTGATAAA-TCA-AAGTTGT-CT-CTTAAATGAGACAAACAT-GATTCTCGTACTAATCTCCAT
* * * * *
227293 TC-ATTCCGTGATTAGGCACTATAAACACATTCT
124 TCTTTTCAG-GATTAGGCACCATAAACATATCCT
** * * * * ** * * **
227326 CCTCTTTAGAATA-ATGATATTGATGGTTTTCTTTTC-CATG-GAAATCTTTTCTTTGTC-TTAT
1 TTTCATTAGGATACATGACATTGAT-GCTTTGGTTTCGCAAGAGAAA-CTTTTCTTT-CCACCAT
* ** ** * *
227387 TTTTCTTAAAATCAAAGTTTGTACT-TTAAATGAGACATGCGTTGATTCTCGCAC-AAGTCTCCA
63 TATTGAT-AAATCAAAG-TTGT-CTCTTAAATGAGACAAAC-ATGATTCTCGTACTAA-TCTCCA
* * ***
227450 TTCTTTTC-GAGATT-GGCAACCAAAAACACATTAA
123 TTCTTTTCAG-GATTAGGC-ACCATAAACATATCCT
* * *
227484 TTTCATTAGGATACATGACATTGATGCTTTAGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACCATTAT
* ** * *
227549 TGATAGAATCAAAGTTGTCTCTTAAATAAGACAAACATGAAAACTCATACTAATCCCCATTCTTT
66 TGATA-AATCAAAGTTGTCTCTTAAATGAGACAAACATG-ATTCTCGTACTAATCTCCATTCTTT
** ** *
227614 TTGGGATTAGGCACTGTAAACATAGCCT
129 TCAGGATTAGGCACCATAAACATATCCT
* * * * * ** *
227642 TCTCATAAGGATGCATGATC-TTGATGCTTTGGTTTCACAGGAGACGC-TTTCTTCCCACCAATT
1 TTTCATTAGGATACATGA-CATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACC-ATT
* * * * * * * * *** *
227705 TTTG-TAAGGT-ATGAGTTCAT-TGCTCAAATGAGACAAACACGGATTTTTGTAGGGATCTTCAT
64 ATTGATAA-ATCA-AAGTT-GTCT-CTTAAATGAGACAAACA-TGATTCTCGTACTAATCTCCAT
* * * * * *
227767 TCATTTC-GTTATTAGGCACTATAAGCTTATTCT
124 TCTTTTCAG-GATTAGGCACCATAAACATATCCT
** * * * * * ** * * * * * *
227800 CCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGTATG-GAAATATTTTCTTTTTCA-TATT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAA-CTTTTC-TTTCCACCATT
** ** * * *
227863 -TTCCTTAAAATCAAAGTTTGTGCT-TTAAATGAGACATGCATTGATTCTCGCA-AAAGTTTCCA
64 ATT-GAT-AAATCAAAG-TTGT-CTCTTAAATGAGACAAACA-TGATTCTCGTACTAA-TCTCCA
* * * *
227925 TTCTTTTCAAGATTGGGAACCAAAAAGACAT-TCC-
123 TTCTTTTCAGGATTAGGCACC-ATAA-ACATATCCT
* * * *
227959 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCATCGTTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACCATTAT
* * * * *
228024 TGATAGAATCAAAGTTGTCTCTTAAAT-ACGGCAAA-ATTAAATACTCATACTAATCCCCATTCC
66 TGATA-AATCAAAGTTGTCTCTTAAATGA-GACAAACA-T-GATTCTCGTACTAATCTCCATT-C
* *
228087 TTTT-AGGATTAGGCGCCATACACATAGT-CT
126 TTTTCAGGATTAGGCACCATAAACATA-TCCT
* * * * * ** *
228117 TCTCATAAGGATACATGATC-TTGAAGCTTTGGTTTCACAGGAGACGC-TTTCTTCCCACCAATT
1 TTTCATTAGGATACATGA-CATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACC-ATT
* * * * * * * *** *
228180 CTTG-T-AAGCTATGAGTTCAT-TGCTCAAATGAGACAAACATGGATTTTTGTAGGGATCTTCAT
64 ATTGATAAATC-A-AAGTT-GTCT-CTTAAATGAGACAAACAT-GATTCTCGTACTAATCTCCAT
* * * *
228242 TCATTTC-GTGATTAGGCACTATAAACACATTCT
124 TCTTTTCAG-GATTAGGCACCATAAACATATCCT
** * * * * * ** * * * **
228275 CCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATG-GAAATCTTTTCTTTGTC-TTATT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAA-CTTTTCTTT-CCACCATT
** ** * * *
228338 -TTCCTTAAAATCAAAGTTTGTACT-TTAAATGAGACATGCGTTGATTCTCGCA-AAAGTCTCCA
64 ATT-GAT-AAATCAAAG-TTGT-CTCTTAAATGAGACAAAC-ATGATTCTCGTACTAA-TCTCCA
* * * * * ***
228400 TTCTTTTCAAGATTGGGAACCAAAAACACATTAA
123 TTCTTTTCAGGATTAGGCACCATAAACATATCCT
*
228434 TTTCATTAGGATACATGACATTGATGCTTTGGTGTT-GCAAGAGAAGCTTTTCTTTCCACCATTA
1 TTTCATTAGGATACATGACATTGATGCTTTGGT-TTCGCAAGAGAAACTTTTCTTTCCACCATTA
* * ** *
228498 TTGATAGAATCAAAGTTGTCTCTTAAATAAGACAAATATGAATAATCATACTAATC-CACATTCC
65 TTGATA-AATCAAAGTTGTCTCTTAAATGAGACAAACATG-ATTCTCGTACTAATCTC-CATT-C
228562 TTTT-AGGATTAGGCACCATAAACATAGT-CT
126 TTTTCAGGATTAGGCACCATAAACATA-TCCT
* * * * ** *
228592 TCTT-ATAAGGATGCATGATC-TTGATGCTTTGGTTTTGCAAGATACGC-TTTCTTCCCACCAAT
1 T-TTCATTAGGATACATGA-CATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACC-AT
* * * * * * * *** *
228654 TTTTG-TAAAGT-ATGAGTT-TATTGCTCAAATGATAAAAACATGGATTCTTGTAGGGATC-CTT
63 TATTGATAAA-TCA-AAGTTGT-CT-CTTAAATGAGACAAACAT-GATTCTCGTACTAATCTC-C
* * *
228715 ATTCATTTC-GTGATTAGGCACTATAAACCCATTCTCCT
122 ATTCTTTTCAG-GATTAGGCACCATAAA--CA-TATCCT
* * * * ** * * * **
228753 TTT--TT-GGATAAATGATATTTATGGTTTTCTTTTGCATG-GAAATCTTTTCTTTGTC-TTATT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAA-CTTTTCTTT-CCACCATT
* * ** * * * *
228813 -TTCATTAAAATCAAAGTTTGTAC-ATTAAATGAGACATGCGTTGATTCTCGCA-AAAGTCTCTA
64 ATTGA-T-AAATCAAAG-TTGT-CTCTTAAATGAGACAAAC-ATGATTCTCGTACTAA-TCTCCA
** * * * * * *
228875 TTCTTTTCAACATTGGGAATCAAAAACACATTCCC
123 TTCTTTTCAGGATTAGGCACCATAAACATA-TCCT
* * ** * *
228910 TTT-ATTAGGATACAAGACATTGATG-TTTTGTTGTAACAAGAGAAGCTTTTCTTTCCACTATTA
1 TTTCATTAGGATACATGACATTGATGCTTTGGTT-TCGCAAGAGAAACTTTTCTTTCCACCATTA
* * * * * * * * *
228973 TTGATAGAATCAAAGTTTATCTCTCAAATAAGATAAAGATTAATACTCATACTAATC-CACTTTC
65 TTGATA-AATCAAAG-TTGTCTCTTAAATGAGACAAACA-TGATTCTCGTACTAATCTC-CATTC
** *
229037 TTTTTTGGATTAGGCACCATAAACAGAGT-CT
126 TTTTCAGGATTAGGCACCATAAACATA-TCCT
* * * * ** *
229068 TCTAATAATGATACATGTTATTGATGCTTTGGTTT--CATA-AGAAACATTTTCTTCCCACCAAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCA-AGAGAAAC-TTTTCTTTCCACC-AT
* * ** * * * *
229130 TTTTG-TAAATTCAAATTTCGTGC-CCCAAATGAGACAAGCGTGGATTCTAGT--TAGGATCTTC
63 TATTGATAAA-TCAAAGTT-GT-CTCTTAAATGAGACAAACAT-GATTCTCGTACTA--ATCTCC
** * * *
229191 ATTCAATTCATGATTAGGCACTGCA-AAACACATTCT
122 ATTCTTTTCAGGATTAGGCAC--CATAAACATATCCT
* * * * * ** * ** **
229227 TCTCATTAGGATAAATGATATTTATGGTTTTCTTTTGCGTG-GAAATCTTTTCTTTGCC-TTATT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAA-CTTTTCTTT-CCACCATT
** * ** * *
229290 -TTCCTTAAAATCAAAGTTTGTAC-ATTAAATGAGACATGCATTGATTCTCGCA-AAAGTCTCCA
64 ATT-GAT-AAATCAAAG-TTGT-CTCTTAAATGAGACAAACA-TGATTCTCGTACTAA-TCTCCA
* * * *
229352 TTCTTTTCAAGATTGGGAACCAAAAACACGT-TCC-
123 TTCTTTTCAGGATTAGGCACCATAAACA--TATCCT
* *
229386 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAACTTTTCTTTCCACCGTTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACCATTAT
* ** * *
229451 TGATAGAATCAAAGTTGTCTCTTAAATAAGACAAACATGAAAACTCATACTAATCCCCATTCTTT
66 TGATA-AATCAAAGTTGTCTCTTAAATGAGACAAACATG-ATTCTCGTACTAATCTCCATTCTTT
*
229516 TCAGGATTAGGCACCATAAACATAGCCT
129 TCAGGATTAGGCACCATAAACATATCCT
* * * * ** ** *
229544 TTTCATAAGGATACATGATC-TTGATGCTTTGGTTTCACAGGATATGC-TTTCTCCCCACTAATT
1 TTTCATTAGGATACATGA-CATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCAC-CATT
* * * * * * *** *
229607 TTTG-TAAGGT-ATAAGTTCAT-TGCTCAAATGAGACAAACATGGATTTTTGTAGGGATCTTCAT
64 ATTGATAA-ATCA-AAGTT-GTCT-CTTAAATGAGACAAACAT-GATTCTCGTACTAATCTCCAT
* * * *
229669 TCATTTC-GTGATTAGGCACTATAAGCATATTCT
124 TCTTTTCAG-GATTAGGCACCATAAACATATCCT
** * * * ** * ** * * *
229702 CCTCTTTAGGATAAATGATATTTCTGGTTTTCTTTTGCATG-GAAATCTTTTCTTTGCCA-TATT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAA-CTTTTCTTT-CCACCATT
** * ** * *
229765 -TTCCTTAAAACAAAAGTTTGTACT-TTAAATGAGACATGCATTGATTCTCGCA-AAAGTCTCCA
64 ATT-GATAAATC-AAAG-TTGT-CTCTTAAATGAGACAAACA-TGATTCTCGTACTAA-TCTCCA
* * * *
229827 TTCTTTTCAAGATTGGGAACCAAAAAGACAT-TCC-
123 TTCTTTTCAGGATTAGGCACC-ATAA-ACATATCCT
* * * *
229861 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCATCGTTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACCATTAT
* * * * ** * * *
229926 TGATAGAATCAAAGTTATCTCTAAAATAAGGCAAAGTTGAATACTCATACTAATCCCCATTCCTT
66 TGATA-AATCAAAGTTGTCTCTTAAATGAGACAAACATG-ATTCTCGTACTAATCTCCATT-CTT
229991 TT-AGGATTAGGCACCATAAACATAGT-CT
128 TTCAGGATTAGGCACCATAAACATA-TCCT
* * * * * *
230019 TCTCATAAGGATACATGATC-TTGATGCTTTGGTTTTGCAAGATACAC-TTTCTTCCCACCAATT
1 TTTCATTAGGATACATGA-CATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACC-ATT
* * * * * * * *** *
230082 TTTG-TAAAGT-ATGAGTT-TATTGCTCAAATGATAAAAACATGGATTCTTGTAGGGATC-CTTA
64 ATTGATAAA-TCA-AAGTTGT-CT-CTTAAATGAGACAAACAT-GATTCTCGTACTAATCTC-CA
* * *
230143 TTCATTTC-GTGATTAGGCACTATAAACCCATTCTCCT
123 TTCTTTTCAG-GATTAGGCACCATAAA--CA-TATCCT
* * * * ** * * * **
230180 TTT--TT-GGATAAATGATATTTATGGTTTTCTTTTGCATG-GAAATCTTTTCTTTGTC-TTATT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAA-CTTTTCTTT-CCACCATT
* * ** * * * *
230240 -TTCATTAAAATCAAAGTTTGTAC-ATTAAATGAGACATGCGTTGATTCTCGCA-AAAGTCTCTA
64 ATTGA-T-AAATCAAAG-TTGT-CTCTTAAATGAGACAAAC-ATGATTCTCGTACTAA-TCTCCA
** * * * * * *
230302 TTCTTTTCAACATTGGGAATCAAAAACACATTCCC
123 TTCTTTTCAGGATTAGGCACCATAAACATA-TCCT
* * ** * *
230337 TTT-ATTAGGATACAAGACATTGATG-TTTTGTTGTAACAAGAGAAGCTTTTCTTTCCACTATTA
1 TTTCATTAGGATACATGACATTGATGCTTTGGTT-TCGCAAGAGAAACTTTTCTTTCCACCATTA
* * * * * * * * *
230400 TTGATAGAATCAAAGTTTATCTCTCAAATAAGATAAAGATTAATACTCATACTAATC-CACTTTC
65 TTGATA-AATCAAAG-TTGTCTCTTAAATGAGACAAACA-TGATTCTCGTACTAATCTC-CATTC
** * *
230464 TTTTTTGCATTAGGCACCATAAACAGAGT-CT
126 TTTTCAGGATTAGGCACCATAAACATA-TCCT
* * * * ** *
230495 TCTAATAATGATACATGTTATTGATGCTTTGGTTT--CATA-AGAAACATTTTCTTCCCACCAAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCA-AGAGAAAC-TTTTCTTTCCACC-AT
* * ** * * * *
230557 TTTTG-TAAATTCAAATTTCGTGC-CCCAAATGAGACAAGCGTGGATTCTAGT--TAGGATCTTC
63 TATTGATAAA-TCAAAGTT-GT-CTCTTAAATGAGACAAACAT-GATTCTCGTACTA--ATCTCC
** * * *
230618 ATTCAATTCATGATTAGGCACTGCA-AAACACATTCT
122 ATTCTTTTCAGGATTAGGCAC--CATAAACATATCCT
* * * * * ** * ** * **
230654 TCTCATTAGGATAAATGATATTTATGGTTTTCTTTTGCGTG-GAAATCTTTCCTTTGCC-TTATT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAA-CTTTTCTTT-CCACCATT
** * * ** * *
230717 -TTCCTTAAAATCAATGTTTGTAC-ATTAAATGAGACATGCATTGATTCTCGCA-AAAGTCTCCA
64 ATT-GAT-AAATCAAAG-TTGT-CTCTTAAATGAGACAAACA-TGATTCTCGTACTAA-TCTCCA
* * * *
230779 TTCTTTTCAAGATTGGGAACCAAAAACACGT-TCC-
123 TTCTTTTCAGGATTAGGCACCATAAACA--TATCCT
* *
230813 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAACTTTTCTTTCCACCGTTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACCATTAT
* ** * *
230878 TGATAGAATCAAAGTTGTCTCTTAAATAAGACAAACATGAAAACTCATACTAATCCCCATTCTTT
66 TGATA-AATCAAAGTTGTCTCTTAAATGAGACAAACATG-ATTCTCGTACTAATCTCCATTCTTT
*
230943 TCAGGATTAGGCACCATAAACATAGCCT
129 TCAGGATTAGGCACCATAAACATATCCT
* * * * ** **
230971 TTTCATAAGGATACATGATC-TTGATGCTTTGGTTTCACAGGATATGC-TTTCTCCCCACCAATT
1 TTTCATTAGGATACATGA-CATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACC-ATT
* * * * * * *** *
231034 TTTG-TAAGGT-ATAAGTTCAT-TGCTCAAATGAGACAAACATGGATTTTTGTAGGGATCTTCAT
64 ATTGATAA-ATCA-AAGTT-GTCT-CTTAAATGAGACAAACAT-GATTCTCGTACTAATCTCCAT
* * * *
231096 TCATTTC-GTGATTAGGCACTATAAGCATATTCT
124 TCTTTTCAG-GATTAGGCACCATAAACATATCCT
** * * * ** * ** * * *
231129 CCTCTTTAGGATAAATGATATTTCTGGTTTTCTTTTGCATG-GAAATCTTTTCTTTGCCA-TATT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAA-CTTTTCTTT-CCACCATT
** * ** * *
231192 -TTCCTTAAAACAAAAGTTTGTACT-TTAAATGAGACATGCATTGATTCTCGCA-AAAGTCTCCA
64 ATT-GATAAATC-AAAG-TTGT-CTCTTAAATGAGACAAACA-TGATTCTCGTACTAA-TCTCCA
* * * *
231254 TTCTTTTCAAGATTGGGAACCAAAAAGACAT-TCC-
123 TTCTTTTCAGGATTAGGCACC-ATAA-ACATATCCT
* * * *
231288 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCATCGTTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACCATTAT
* * * * ** * * *
231353 TGATAGAATCAAAGTTATCTCTAAAATAAGGCAAAGTTGAATACTCATACTAATCCCCATTCCTT
66 TGATA-AATCAAAGTTGTCTCTTAAATGAGACAAACATG-ATTCTCGTACTAATCTCCATT-CTT
231418 TT-AGGATTAGGCACCATAAACATAGT-CT
128 TTCAGGATTAGGCACCATAAACATA-TCCT
* * * * * *
231446 TCTCATAAGGATACATGATC-TTGATGCTTTGGTTTTGCAAGATACAC-TTTCTTCCCACCAATT
1 TTTCATTAGGATACATGA-CATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACC-ATT
* * * * * *** * *
231509 TTTG-TAAAGT-ATGAGTT-TATTGCTCAAATGAGACAAACATGGATTCTTGTAGGGACCTTCAT
64 ATTGATAAA-TCA-AAGTTGT-CT-CTTAAATGAGACAAACAT-GATTCTCGTACTAATCTCCAT
* * *
231571 TCATTTC-GTGATTAGGCACTATAAACACAT--T
124 TCTTTTCAG-GATTAGGCACCATAAACATATCCT
* * * * * * * ** * ** * *
231602 TCCCTCTTTAGGATAAACGATATTTATGGTTTTCTTTTC-CATG-GAAATCTTCCCTTTGTCA-T
1 T--TTCATTAGGATACATGACATTGAT-GCTTTGGTTTCGCAAGAGAAA-CTTTTCTTT-CCACC
** ** *
231664 ATT-TTCCTTAATATCAAAGTTTGTACT-TTAAATGAGACATGCATTGATTCTCGTA-AAAGTCT
61 ATTATT-GATAA-ATCAAAG-TTGT-CTCTTAAATGAGACAAACA-TGATTCTCGTACTAA-TCT
* * * *
231726 CCATTCTTTTCAAGATTGGGAACCAAAAACACGT-TCC-
120 CCATTCTTTTCAGGATTAGGCACCATAAACA--TATCCT
* * *
231763 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAACATTTCTTTCCACCGTTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACCATTAT
* * ** * *
231828 CGATAGAATCAAAGTTGTCTCTTAAATAAGACAAACATGAAAACTCATACTAATCCCCATTCTTT
66 TGATA-AATCAAAGTTGTCTCTTAAATGAGACAAACATG-ATTCTCGTACTAATCTCCATTCTTT
*
231893 TCAGGATTAGGCACCATAAACATAGCCT
129 TCAGGATTAGGCACCATAAACATATCCT
* * * ** **
231921 TTTCATAAGGATACATGATC-TTGATGCTTTGGTTTCACAAGATATGC-TTTCTCCCCACCAATT
1 TTTCATTAGGATACATGA-CATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACC-ATT
* * * * * ** *** *
231984 TTTG-TAAGGT-ATAAGTTCAT-TGCTCAAATGAGACAAACATGGATTTTTATAGGGATCTTCAT
64 ATTGATAA-ATCA-AAGTT-GTCT-CTTAAATGAGACAAACAT-GATTCTCGTACTAATCTCCAT
* * * *
232046 TCATTTC-GTGATTAGGCACTATAAGCATATTCT
124 TCTTTTCAG-GATTAGGCACCATAAACATATCCT
** * * * ** * ** * * *
232079 CCTCTTTAGGATAAATGATATTTCTGGTTTTCTTTTGCATG-GAAATCTTTTCTTTGCCA-TATT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAA-CTTTTCTTT-CCACCATT
** * ** * *
232142 -TTCCTTAAAACCAAAGTTTGTACT-TTAAATGAGACATGCATTGATTCTCGCA-AAAGTCTCCA
64 ATT-GAT-AAATCAAAG-TTGT-CTCTTAAATGAGACAAACA-TGATTCTCGTACTAA-TCTCCA
* * * *
232204 TTCTTTTCAAGATTGGGAACCAAAAAGACAT-TCC-
123 TTCTTTTCAGGATTAGGCACC-ATAA-ACATATCCT
* * * * *
232238 CTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCATCGTTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACCATTAT
* * * ** * * *
232303 TGATAGAATCAAAGTTGTCTCTAAAATAAGGCAAAGTTGAATACTCATACTAATCCCCATTCCTT
66 TGATA-AATCAAAGTTGTCTCTTAAATGAGACAAACATG-ATTCTCGTACTAATCTCCATT-CTT
232368 TT-AGGATTAGGCACCATAAACATAGT-CT
128 TTCAGGATTAGGCACCATAAACATA-TCCT
* * * *
232396 TCTCATAAGGATACATGATC-TTGATGCTTTGGTTTCGC-AG-GATACTCTTT-TTTCCCCACCT
1 TTTCATTAGGATACATGA-CATTGATGCTTTGGTTTCGCAAGAGAAACT-TTTCTTT--CCACCA
* * * * * * * *** * *
232457 TTTTTG-TAAAGT-ATGAGTTCTTTGCTCAAATGAGATAAACATGGATTCTTGTAGGGACCTTCA
62 TTATTGATAAA-TCA-AAGTTGTCT-CTTAAATGAGACAAACAT-GATTCTCGTACTAATCTCCA
* * * *
232520 TTCATTTC-GTGATTAGGCACTATAAACACATTCT
123 TTCTTTTCAG-GATTAGGCACCATAAACATATCCT
** * * * * ** **
232554 CCTCTTTAGGATAAATGATAGTT-ATGGTTTATTTTTC-CTTG-GAAATCTTTTCTCTAT-CA-C
1 TTTCATTAGGATACATGACA-TTGATGCTTT-GGTTTCGCAAGAGAAA-CTTTTCT-T-TCCACC
* ** ** * * *
232614 GTT-TTCCTTAAAATCAAAGTTTGTACT-TTAAATGAGACATGCATTGATTCTTGCA-AAAGTCT
61 ATTATT-GAT-AAATCAAAG-TTGT-CTCTTAAATGAGACAAACA-TGATTCTCGTACTAA-TCT
* * * * * * *
232676 CCATTCTTTTCAAGTTTGGGAACCGA-AAACACATTCA
120 CCATTCTTTTCAGGATTAGGCACC-ATAAACATATCCT
* *
232713 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAACTTTTCTTTCCACCGTTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACCATTAT
* ** * *
232778 TGATAGAATCAAAGTTGTCTCTTAAATAAGACAAACATGAAAACTCATACTAATCCCCATTCTTT
66 TGATA-AATCAAAGTTGTCTCTTAAATGAGACAAACATG-ATTCTCGTACTAATCTCCATTCTTT
*
232843 TCAGGATTAGGCACCATAAACATAGCCT
129 TCAGGATTAGGCACCATAAACATATCCT
* ** * * ** **
232871 TTTCATAAGGATACATGATC-TTGATGCTTTGGTTTCATAGGATATGC-TTTCTCCCCACCAATT
1 TTTCATTAGGATACATGA-CATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACC-ATT
* * * * * * *** *
232934 TTTG-TAAGGT-ATAAGTTCAT-TGCTCAAATGAGACAAACATGGATTTTTGTAGGGATCTTCAT
64 ATTGATAA-ATCA-AAGTT-GTCT-CTTAAATGAGACAAACAT-GATTCTCGTACTAATCTCCAT
* * * * *
232996 TCATTTC-GTGATTAGGAACTATAAGCATATTCT
124 TCTTTTCAG-GATTAGGCACCATAAACATATCCT
** * * * ** * ** * * *
233029 CCTCTTTAGGATAAATGATATTTCTGGTTTTCTTTTGCATG-GAAATCTTTTCTTTGCCA-TATT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAA-CTTTTCTTT-CCACCATT
** * ** * *
233092 -TTCCTTAAAACCAAAGTTTGTACTC-TAAATGAGACATGCATTGATTCTCGCA-AAAGTCTCCA
64 ATT-GAT-AAATCAAAG-TTGT-CTCTTAAATGAGACAAACA-TGATTCTCGTACTAA-TCTCCA
* * * *
233154 TTCTTTTCAAGATTGGGAACCAAAGAGACAT-TCC-
123 TTCTTTTCAGGATTAGGCACCATA-A-ACATATCCT
* * * * *
233188 CTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCATCGTTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACCATTAT
* * * ** * * *
233253 TGATAGAATCAAAGTTGTCTCTAAAATAAGGCAAAGTTGAATACTCATACTAATCCCCATTCCTT
66 TGATA-AATCAAAGTTGTCTCTTAAATGAGACAAACATG-ATTCTCGTACTAATCTCCATT-CTT
233318 TT-AGGATTAGGCACCATAAACATAGT-CT
128 TTCAGGATTAGGCACCATAAACATA-TCCT
* * * *
233346 TCTCATAAGGATACATGATC-TTGATGCTTTGGTTTCAC-AG-GATACTCTTT-TTTCC-CCAAC
1 TTTCATTAGGATACATGA-CATTGATGCTTTGGTTTCGCAAGAGAAACT-TTTCTTTCCACC-A-
* * * * * * * *** * *
233406 TTTTTTTG-TAAAGT-ATGAGTTCTTTGCTCAAATGAGATAAACATGGATTCTTGTAGGGACCTT
62 --TTATTGATAAA-TCA-AAGTTGTCT-CTTAAATGAGACAAACAT-GATTCTCGTACTAATCTC
* * * *
233469 CATTCATTTC-GTGATTAGGCACTATAAACACATTCT
121 CATTCTTTTCAG-GATTAGGCACCATAAACATATCCT
** * * * * ** ** * *
233505 CCTCTTTAGGATAAATGATAGTT-ATGGTTTATTTTTC-CTTG-GAAATCTTTTCTTTATCA-CG
1 TTTCATTAGGATACATGACA-TTGATGCTTT-GGTTTCGCAAGAGAAA-CTTTTCTTT-CCACCA
** ** * * *
233566 TT-TTCCTTAAAATCAAAGTTTGTACT-TTAAATGAGACATGCATTGATTCTTGCA-AAAGTCTC
62 TTATT-GAT-AAATCAAAG-TTGT-CTCTTAAATGAGACAAACA-TGATTCTCGTACTAA-TCTC
* * * * * * *
233628 CATTCTTTTCAAGTTTGGGAACCGA-AAACACATTCA
121 CATTCTTTTCAGGATTAGGCACC-ATAAACATATCCT
* *
233664 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAACTTTTCTTTCCACCGTTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACCATTAT
* ** * * *
233729 TGATAGAATCAAAGTTGTCTCTTAAATAAGACAAACATGAAAACTCATACGAATCCCCATTCTTT
66 TGATA-AATCAAAGTTGTCTCTTAAATGAGACAAACATG-ATTCTCGTACTAATCTCCATTCTTT
*
233794 TCAGGATTAGGCACCATAAACATAGCCT
129 TCAGGATTAGGCACCATAAACATATCCT
* * * * *
233822 TTTCATAAGGATACATGATC-TTGATGCTTTGGTTTTGCAAGATACAC-TTTCTTCCCACCAATT
1 TTTCATTAGGATACATGA-CATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACC-ATT
* * * * * *** * *
233885 TTTG-TAAAGT-ATGAGTT-TATTGCTCAAATGAGACAAACATGGATTCTTGTAGGGACCTTCAT
64 ATTGATAAA-TCA-AAGTTGT-CT-CTTAAATGAGACAAACAT-GATTCTCGTACTAATCTCCAT
* * * *
233947 TCATTTC-GTGATTAGGCACTATAAACACATTCT
124 TCTTTTCAG-GATTAGGCACCATAAACATATCCT
** * * * * ** ** * *
233980 CCTCTTTAGGATAAATGATAGTT-ATGGTTTATTTTTC-CTTG-GAAATCTTTTCTTTATCA-CG
1 TTTCATTAGGATACATGACA-TTGATGCTTT-GGTTTCGCAAGAGAAA-CTTTTCTTT-CCACCA
** ** * * *
234041 TT-TTCCTTAAAATCAAAGTTTGTACT-TTAAATGAGACATGCATTGATTCTTGCA-AAAGTCTC
62 TTATT-GAT-AAATCAAAG-TTGT-CTCTTAAATGAGACAAACA-TGATTCTCGTACTAA-TCTC
* * * *
234103 CATTCTTTTCAAGATTGGGAACCAAAAAGACAT-TCC-
121 CATTCTTTTCAGGATTAGGCACC-ATAA-ACATATCCT
* * * *
234139 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCATCGTTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACCATTAT
* * * ** * * *
234204 TGATAGAATCAAAGTTGTCTCTAAAATAAGGCAAAGTTGAATACTCATACTAATCCCCATTCCTT
66 TGATA-AATCAAAGTTGTCTCTTAAATGAGACAAACATG-ATTCTCGTACTAATCTCCATT-CTT
234269 TT-AGGATTAGGCACCATAAACATAGT-CT
128 TTCAGGATTAGGCACCATAAACATA-TCCT
* * * * * *
234297 TCTCATAAGGATACATGATC-TTGATGCTTTGGTTTTGCAAGATACAC-TTTCTTCCCACCAATT
1 TTTCATTAGGATACATGA-CATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACC-ATT
* * * * * *** * *
234360 TTTG-TAAAGT-ATGAGTT-TATTGCTCAAATGAGACAAACATGGATTCTTGTAGGGACCTTCAT
64 ATTGATAAA-TCA-AAGTTGT-CT-CTTAAATGAGACAAACAT-GATTCTCGTACTAATCTCCAT
* * *
234422 TCATTTC-GTGATTAGGCACTATAAACACAT--T
124 TCTTTTCAG-GATTAGGCACCATAAACATATCCT
* * * * * * * ** * ** * *
234453 TCCCTCTTTAGGATAAACGATATTTATGGTTTTCTTTTC-CATG-GAAATCTTCCCTTTGTCA-T
1 T--TTCATTAGGATACATGACATTGAT-GCTTTGGTTTCGCAAGAGAAA-CTTTTCTTT-CCACC
** ** *
234515 ATT-TTCCTTAATATCAAAGTTTGTACT-TTAAATGAGACATGCATTGATTCTCGTA-AAAGTCT
61 ATTATT-GATAA-ATCAAAG-TTGT-CTCTTAAATGAGACAAACA-TGATTCTCGTACTAA-TCT
* * * *
234577 CCATTCTTTTCAAGATTGGGAACCAAAAACACGT-TCC-
120 CCATTCTTTTCAGGATTAGGCACCATAAACA--TATCCT
* * *
234614 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAACATTTCTTTCCACCGTTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACCATTAT
* ** * *
234679 TGATAGAATCAAAGTTGTCTCTTAAATAAGACAAACATGAAAACTCATACTAATCCCCATTCTTT
66 TGATA-AATCAAAGTTGTCTCTTAAATGAGACAAACATG-ATTCTCGTACTAATCTCCATTCTTT
*
234744 TCAGGATTAGGCACCATAAACATAGCCT
129 TCAGGATTAGGCACCATAAACATATCCT
* * * ** **
234772 TTTCATAAGGATACATGATC-TTGATGCTTTGGTTTCACAAGATATGC-TTTCTCCCCACCAATT
1 TTTCATTAGGATACATGA-CATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACC-ATT
* * * * * * *** *
234835 TTTG-TAAGGT-ATAAGTTCAT-TGCTCAAATGAGACAAACATGGATTTTTGTAGGGATCTTCAT
64 ATTGATAA-ATCA-AAGTT-GTCT-CTTAAATGAGACAAACAT-GATTCTCGTACTAATCTCCAT
* * * *
234897 TCATTTC-GTGATTAGGCACTATAAGCATATTCT
124 TCTTTTCAG-GATTAGGCACCATAAACATATCCT
** * * * ** * ** * * *
234930 CCTCTTTAGGATAAATGATATTTCTGGTTTTCTTTTGCATG-GAAATCTTTTCTTTGCCA-TATT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAA-CTTTTCTTT-CCACCATT
** * ** * *
234993 -TTCCTTAAAACCAAAGTTTGTACT-TTAAATGAGACATGCATTGATTCTCGCA-AAAGTCTCCA
64 ATT-GAT-AAATCAAAG-TTGT-CTCTTAAATGAGACAAACA-TGATTCTCGTACTAA-TCTCCA
* * * *
235055 TTCTTTTCAAGATTGGGAACCAAAAAGACAT-TCC-
123 TTCTTTTCAGGATTAGGCACC-ATAA-ACATATCCT
* * * *
235089 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCATCGTTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACCATTAT
* * * * ** * * *
235154 TGATAGAATCAAAGTTATCTCTAAAATAAGGCAAAGTTGAATACTCATACTAATCCCCATTCCTT
66 TGATA-AATCAAAGTTGTCTCTTAAATGAGACAAACATG-ATTCTCGTACTAATCTCCATT-CTT
235219 TT-AGGATTAGGCACCATAAACATAGT-CT
128 TTCAGGATTAGGCACCATAAACATA-TCCT
* * * * * *
235247 TCTCATAAGGATACATGATC-TTGATGCTTTGGTTTTGCAAGATACAC-TTTCTTCCCACCAATT
1 TTTCATTAGGATACATGA-CATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACC-ATT
* * * * * *** * *
235310 TTTG-TAAAGT-ATGAGTT-TATTGCTCAAATGAGACAAACATGGATTCTTGTAGGGACCTTCAT
64 ATTGATAAA-TCA-AAGTTGT-CT-CTTAAATGAGACAAACAT-GATTCTCGTACTAATCTCCAT
* * *
235372 TCATTTC-GTGATTAGGCACTATAAACACAT--T
124 TCTTTTCAG-GATTAGGCACCATAAACATATCCT
* * * * * * * ** * * ** * *
235403 TCCCTCTTTAGGATAAACGATATTTATGGTTTTCTTTTGCATG-GAAATCTTCCCTTTGTCA-TA
1 T--TTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAA-CTTTTCTTT-CCACCA
** * ** * * *
235466 TT-TTCCTTAATATCAAAGTTTGTACT-TTAAACGAGACATGCGTTGATTCTCGCA-AAAGTCTC
62 TTATT-GATAA-ATCAAAG-TTGT-CTCTTAAATGAGACAAAC-ATGATTCTCGTACTAA-TCTC
* * * * * * *
235528 CATTCTTTTCAAGATTGGGAACCAAAAACACATTCA
121 CATTCTTTTCAGGATTAGGCACCATAAACATATCCT
* * * * **
235564 TTTCATTAGGATACATGACATTGAGGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTGC
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACCATTAT
* * ** * *
235629 TAATAGAATCAAAGTTGTCTCTTAAATAAGACAAACATGAAAACTCATACTAATCCCCATTCTTT
66 TGATA-AATCAAAGTTGTCTCTTAAATGAGACAAACATG-ATTCTCGTACTAATCTCCATTCTTT
*
235694 TCAGGATTAGGCACCATAAACATAGCCT
129 TCAGGATTAGGCACCATAAACATATCCT
* * * ** **
235722 TTTCATAAGGATACATGATC-TTGATGCTTTGGTTTCACAAGATATGC-TTTCTCCCCACCAATT
1 TTTCATTAGGATACATGA-CATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACC-ATT
* * * * * * *** *
235785 TTTG-TAAGGT-ATAAGTTCAT-TGCTCAAATGAGACAAACATGGATTTTTGTAGGGATCTTCAT
64 ATTGATAA-ATCA-AAGTT-GTCT-CTTAAATGAGACAAACAT-GATTCTCGTACTAATCTCCAT
* * * *
235847 TCATTTC-GTGATTAGGCACTATAAGCATATTCT
124 TCTTTTCAG-GATTAGGCACCATAAACATATCCT
** * * * ** * ** * * *
235880 CCTCTTTAGGATAAATGATATTTCTGGTTTTCTTTTGCATG-GAAATCTTTTCTTTGCCA-TATT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAA-CTTTTCTTT-CCACCATT
** * ** * *
235943 -TTCCTTAAAACCAAAGTTTGTACT-TTAAATGAGACATGCATTGATTCTCGCA-AAAGTCTCCA
64 ATT-GAT-AAATCAAAG-TTGT-CTCTTAAATGAGACAAACA-TGATTCTCGTACTAA-TCTCCA
* * *
236005 TTCTTTTCAAGATT-GGGACCCAAAAAGACAT-TCC-
123 TTCTTTTCAGGATTAGGCA-CC-ATAA-ACATATCCT
* * * * *
236039 CTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCATCGTTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACCATTAT
* * * ** * * *
236104 TGATAGAATCAAAGTTGTCTCTAAAATAAGGCAAAGTTGAATACTCATACTAATCCCCATTCCTT
66 TGATA-AATCAAAGTTGTCTCTTAAATGAGACAAACATG-ATTCTCGTACTAATCTCCATT-CTT
236169 TT-AGGATTAGGCACCATAAACATAGT-CT
128 TTCAGGATTAGGCACCATAAACATA-TCCT
* * * *
236197 TCTCATAAGGATACATGATC-TTGATGCTTTGGTTTCGC-AG-GATACTCTTT-TTTCCCCACCT
1 TTTCATTAGGATACATGA-CATTGATGCTTTGGTTTCGCAAGAGAAACT-TTTCTTT--CCACCA
* * * * * * * *** * *
236258 TTTTTG-TAAAGT-ATGAGTTCTTTGCTCAAATGAGATAAACATGGATTCTTGTAGGGACCTTCA
62 TTATTGATAAA-TCA-AAGTTGTCT-CTTAAATGAGACAAACAT-GATTCTCGTACTAATCTCCA
* * * *
236321 TTCATTTC-GTGATTAGGCACTATAAACACATTCT
123 TTCTTTTCAG-GATTAGGCACCATAAACATATCCT
** * * * * ** ** * *
236355 CCTCTTTAGGATAAATGATAGTT-ATGGTTTATTTTTC-CTTG-GAAATCTTTTCTTTATCA-CG
1 TTTCATTAGGATACATGACA-TTGATGCTTT-GGTTTCGCAAGAGAAA-CTTTTCTTT-CCACCA
** ** * * *
236416 TT-TTCCTTAAAATCAAAGTTTGTACT-TTAAATGAGACATGCATTGATTCTTGCA-AAAGTCTC
62 TTATT-GAT-AAATCAAAG-TTGT-CTCTTAAATGAGACAAACA-TGATTCTCGTACTAA-TCTC
* * * * * * *
236478 CATTCTTTTCAAGTTTGGGAACCGA-AAACACATTCA
121 CATTCTTTTCAGGATTAGGCACC-ATAAACATATCCT
* *
236514 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAACTTTTCTTTCCACCGTTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACCATTAT
* * ** * *
236579 TGATAGAATCAAAGTTGTCTCTTAAATAAGAAAAACATGAAAACTCATACTAATCCCCATTCTTT
66 TGATA-AATCAAAGTTGTCTCTTAAATGAGACAAACATG-ATTCTCGTACTAATCTCCATTCTTT
*
236644 TCAGGATTAGGCACCATAAACATAGCCT
129 TCAGGATTAGGCACCATAAACATATCCT
* * * * ** **
236672 TTTCATAAGGATACATGATC-TTGATGCTTTGGTTTCACAGGATATGC-TTTCTCCCCACCAATT
1 TTTCATTAGGATACATGA-CATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACC-ATT
* * * * * * *** *
236735 TTTG-TAAGGT-ATAAGTTCAT-TGCTCAAATGAGACAAACATGGATTTTTGTAGGGATCTTCAT
64 ATTGATAA-ATCA-AAGTT-GTCT-CTTAAATGAGACAAACAT-GATTCTCGTACTAATCTCCAT
* * * *
236797 TCATTTC-GTGATTAGGCACTATAAGCATATTCT
124 TCTTTTCAG-GATTAGGCACCATAAACATATCCT
** * * * ** * ** * * *
236830 CCTCTTTAGGATAAATGATATTTCTGGTTTTCTTTTGCATG-GAAATCTTTTCTTTGCCA-TATT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAA-CTTTTCTTT-CCACCATT
** * ** * *
236893 -TTCCTTAAAACCAAAGTTTGTACT-TTAAATGAGACATGCATTGATTCTCGCA-AAAGTCTCCA
64 ATT-GAT-AAATCAAAG-TTGT-CTCTTAAATGAGACAAACA-TGATTCTCGTACTAA-TCTCCA
* * * *
236955 TTCTTTTCAAGATTGGGAACCAAAAGACAT-TCC-
123 TTCTTTTCAGGATTAGGCACCATAA-ACATATCCT
* * * * *
236988 CTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCATCGTTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACCATTAT
* * * ** * * *
237053 TGATAGAATCAAAGTTGTCTCTAAAATAAGGCAAAGTTGAATACTCATACTAATCCCCATTCCTT
66 TGATA-AATCAAAGTTGTCTCTTAAATGAGACAAACATG-ATTCTCGTACTAATCTCCATT-CTT
237118 TT-AGGATTAGGCACCATAAACATAGT-CT
128 TTCAGGATTAGGCACCATAAACATA-TCCT
* * * * * * *
237146 TCTCATAAGGATACATGATC-TTGAGGCTTTGGTTTTGCAAGATACAC-TTTCTTCCCACCAATT
1 TTTCATTAGGATACATGA-CATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACC-ATT
* * * * * *** * *
237209 TTTG-TAAAGT-ATGAGTT-TATTGCTCAAATGAGACAAACATGGATTCTTGTAGGGACCTTCAT
64 ATTGATAAA-TCA-AAGTTGT-CT-CTTAAATGAGACAAACAT-GATTCTCGTACTAATCTCCAT
* * *
237271 TCATTTC-GTGATTAGGCACTATAAACACAT--T
124 TCTTTTCAG-GATTAGGCACCATAAACATATCCT
* * * * * * * ** * * ** * *
237302 TCCCTCTTTAGGATAAACGATATTTATGGTTTTCTTTTGCATG-GAAATCTTCCCTTTGTCA-TA
1 T--TTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAA-CTTTTCTTT-CCACCA
** * ** * * *
237365 TT-TTCCTTAATATCAAAGTTTGTACT-TTAAACGAGACATGCGTTGATTCTCGCA-AAAGTCTC
62 TTATT-GATAA-ATCAAAG-TTGT-CTCTTAAATGAGACAAAC-ATGATTCTCGTACTAA-TCTC
* * * * * * *
237427 CATTCTTTTCAAGATTGGGAACCAAAAACACATTCA
121 CATTCTTTTCAGGATTAGGCACCATAAACATATCCT
* * * * **
237463 TTTCATTAGGATACATGACATTGAGGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTGC
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACCATTAT
* * * * * * * *
237528 TAATAGAATCAAAGTTGTCTCTTAATTAAGAGAAATATGAATACTCATACTAATC-CACATTCCT
66 TGATA-AATCAAAGTTGTCTCTTAAATGAGACAAACATG-ATTCTCGTACTAATCTC-CATTCTT
*
237592 TTCAGGTTTAGGCACCATAAACATAGT-CT
128 TTCAGGATTAGGCACCATAAACATA-TCCT
* * * * *
237621 TCTCATAAGGATACATGATC-TTGTTGCTTTGGTTTCGCAAGATG-CAC-TTTCTTCCCACCAAT
1 TTTCATTAGGATACATGA-CATTGATGCTTTGGTTTCGCAAGA-GAAACTTTTCTTTCCACC-AT
* ** * * * * *** *
237683 TTTTG-TAAAGTCTGAGTT-TATTCCTCAAAAGAGAC-AACATGGATTCTTGTAGGGATCTTCAT
63 TATTGATAAA-TCAAAGTTGT-CT-CTTAAATGAGACAAACAT-GATTCTCGTACTAATCTCCAT
* * *
237745 TCATTTC-GTGATTAGGCACTATAAATACAT-TCTCC
124 TCTTTTCAG-GATTAGGCACCAT-AA-ACATATC-CT
* * * * ** * * * **
237780 TTT--TTAGGATAAATGATATTTATGGTTTTCTTTTGCATG-GAAATCTTTTCTTTGTC-TTATT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAA-CTTTTCTTT-CCACCATT
* ** * ** *
237841 TTTCCTTAAAATCAAAGTTTGTACT-TTAATTGAGACATGCATTGATTCTCGTA-AAAGTCTCCA
64 ATT-GAT-AAATCAAAG-TTGT-CTCTTAAATGAGACAAACA-TGATTCTCGTACTAA-TCTCCA
** * * * * *
237904 TTCTTTTCAACATTAGGAATCAAAAACACATTCCC
123 TTCTTTTCAGGATTAGGCACCATAAACATA-TCCT
** * * * **** * * *
237939 TTT-ATTAGGATACAACACAATGATGTTTTAGTGGAACAAGAGAAGCTTTTCTTTCCACTACTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACCATTAT
* * *
238003 TGATAGAATCAAAGTT-TCTCTCTCAAATAAGACAAACATGAATACTCATACTAATC-CACATTC
66 TGATA-AATCAAAGTTGTCTCT-T-AAATGAGACAAACATG-ATTCTCGTACTAATCTC-CATTC
* * *
238066 TTTTCTGGACTAGGCACCATAAACA-A--AT
126 TTTTCAGGATTAGGCACCATAAACATATCCT
* * * * * *
238094 TCTAATAAGGATACATGATATTGATGCTTTGGTTTCAC-A-AGAAACATTTTCTTCCCACCAATT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAAC-TTTTCTTTCCACC-ATT
* ** * * * * *
238157 TTTG-TAAATTCAAA-TT-TCTTGCCCCAAATGTGACAAGCGTGGATTCTAGT--TAGGATCTTC
64 ATTGATAAA-TCAAAGTTGTC-T--CTTAAATGAGACAAACAT-GATTCTCGTACTA--ATCTCC
** * * *
238217 ATTCAATTCATGATTAGGCACTACA-AAACACATTCT
122 ATTCTTTTCAGGATTAGGCAC--CATAAACATATCCT
* * * * ** * ** **
238253 TCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCGTG-GAAATCTTTTCTTTGCC-TTATT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAA-CTTTTCTTT-CCACCATT
** * ** * * *
238316 -TTCCTTAAAATAAAAGTTTGTACT-TTAAATGAGACACGCGTTGATTCTCGCA-AAAGTCTCCA
64 ATT-GAT-AAATCAAAG-TTGT-CTCTTAAATGAGACAAAC-ATGATTCTCGTACTAA-TCTCCA
* * * * *
238378 TTCTTTTGAAGATTAGGAACCAAAAACAAATTCC-
123 TTCTTTTCAGGATTAGGCACCATAAACATA-TCCT
* * *
238412 TTTCATTAGGATACATGACATTGACGCTTTGGTGTT-GCAAGAGAAGCTTTTCTTTCCACCGTTA
1 TTTCATTAGGATACATGACATTGATGCTTTGGT-TTCGCAAGAGAAACTTTTCTTTCCACCATTA
* * * *
238476 TTGATAGAATCAAAGTTGTCTCTTAAATAATACAAACATGAATACTCATACTAATC-CCTATTCT
65 TTGATA-AATCAAAGTTGTCTCTTAAATGAGACAAACATG-ATTCTCGTACTAATCTCC-ATTCT
*** *
238540 TTTCAGGATTAGGCGTTATAAACATAGCCT
127 TTTCAGGATTAGGCACCATAAACATATCCT
* * * *
238570 TTTCATAAGGATACATGATC-TTGATGCTTTGG-TTCGC-AG-GATACGCTTTCTTCCCACCAAT
1 TTTCATTAGGATACATGA-CATTGATGCTTTGGTTTCGCAAGAGAAAC-TTTTCTTTCCACC-AT
* ** * * * * * *** *
238631 TTTTG-TGAGGT-ATGAGTTCAT-TGCTCAAATGAGACAAACATGGATTCTTGCAAGGATCTTCA
63 TATTGAT-AAATCA-AAGTT-GTCT-CTTAAATGAGACAAACAT-GATTCTCGTACTAATCTCCA
* ** * *
238693 TTCATTTC-GTGATTAGGCATTATAAACACATTCT
123 TTCTTTTCAG-GATTAGGCACCATAAACATATCCT
** * * * * * * ** * * **
238727 CCTCTTTCGGATAAATGATATTTATGGTTTTCTTTTGCATG-GAAATCTTTTCTGTGT-C-TTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAA-CTTTTCT-T-TCCACCAT
** * ** * *
238789 T-TTCCTTAAAATTAAAGTTTGTACT-TTAAATGAGACATGCATTGATTCTCGTA-AAAGTCTCT
63 TATT-GAT-AAATCAAAG-TTGT-CTCTTAAATGAGACAAACA-TGATTCTCGTACTAA-TCTCC
** * * * * * *
238851 ATTCTTTTCAACATTGGGAATCAAAAACACATTCCC
122 ATTCTTTTCAGGATTAGGCACCATAAACATA-TCCT
* * ** * *
238887 TTT-ATTAGGATACAAGACATTGATG-TTTTGTTGTAACAAGAGAAGCTTTTCTTTCCACTATTA
1 TTTCATTAGGATACATGACATTGATGCTTTGGTT-TCGCAAGAGAAACTTTTCTTTCCACCATTA
* * * * * * * *
238950 TTGATAGAATGAAAGTCTATCTCTCAAATAAGATAAACATTAATACTCATACTAATC-CACATTC
65 TTGATA-AATCAAAGT-TGTCTCTTAAATGAGACAAACA-TGATTCTCGTACTAATCTC-CATTC
* *
239014 TTTTCTGGATTAGGCACCATAAACAAAGT-CT
126 TTTTCAGGATTAGGCACCATAAACATA-TCCT
* * * * *
239045 TCT-AATAGTGATACATGATATTGATGCTTTGGTTTCAC-A-AGAAACATTTTCTTCCCACCAAT
1 TTTCATTAG-GATACATGACATTGATGCTTTGGTTTCGCAAGAGAAAC-TTTTCTTTCCACC-AT
* * ** * * * *
239107 TTTTG-TAAATTCAAATTTCGTGC-CGCAAATGAGACAACCGTGGATTCTAGT--TAGGATCTTC
63 TATTGATAAA-TCAAAGTT-GT-CTCTTAAATGAGACAAACAT-GATTCTCGTACTA--ATCTCC
** * * *
239168 ATTCAATTCATGATTAGGCACTACA-AAACACATTCT
122 ATTCTTTTCAGGATTAGGCAC--CATAAACATATCCT
* * * * * ** * * **
239204 TCTCATTAGGATAAATGATATTTATGGTTTTCTTTTGC--GTCGAAATCTTTTCTTTGCC-TTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAG-AGAAA-CTTTTCTTT-CCACCAT
** ** *
239266 T-TTCCTTAAAATCAAAGTT-TCTACTTTAAATGAGACATGCATTGATTCTCG--CAAAGGTCTC
63 TATT-GAT-AAATCAAAGTTGTCT-C-TTAAATGAGACAAACA-TGATTCTCGTACTAA--TCTC
* * * * *
239327 CATTCTTTCCAAGATTGGGAACCAAAAACACGT-TCC-
121 CATTCTTTTCAGGATTAGGCACCATAAACA--TATCCT
* * *
239363 TTTCACTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAACTTTTCTTTCCACCGTTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACCATTAT
* ** *
239428 TGATAGAATCAAAGTTGTCTCTTAAATAAGACAAACATGAAAACTCATACTAATC-CCATTCTTT
66 TGATA-AATCAAAGTTGTCTCTTAAATGAGACAAACATG-ATTCTCGTACTAATCTCCATTCTTT
* *
239492 TCAGGATTAGGTACCATAAACATAGCCT
129 TCAGGATTAGGCACCATAAACATATCCT
* * ** * * ** * *
239520 TCTCATAAGGATACATGATTTTGATGCTTTGGTTTCACAAGATACGC-TTTCTTCCCACCAATTT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACC-ATTA
* * * * * * * *** *
239584 TTG-TAAGGT-ATGAGTTCAT-TGCTCAAATAAGACAAACATGGATTTTTGTAGGGATCTTCATT
65 TTGATAA-ATCA-AAGTT-GTCT-CTTAAATGAGACAAACAT-GATTCTCGTACTAATCTCCATT
* * * * *
239646 CATTTCGGGATTAGGCACTATAAGCATATTCT
125 CTTTTCAGGATTAGGCACCATAAACATATCCT
** * * * * * ** * * * *
239678 GCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATG-GAAATCTTTTCTTTGTCA-TATT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAA-CTTTTCTTT-CCACCATT
** * ** * *
239741 -TTCCTTAAAATCAAAGTTTGTACT-TTAAATGAGATATGCATTGATTCTCGCA-AAAGTCTCCA
64 ATT-GAT-AAATCAAAG-TTGT-CTCTTAAATGAGACAAACA-TGATTCTCGTACTAA-TCTCCA
* * * *
239803 TTCTTTTCAAGATTGGGAACCAAAAAGACAT-TCC-
123 TTCTTTTCAGGATTAGGCACC-ATAA-ACATATCCT
* * * * *
239837 CTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCATCGTTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACCATTAT
* * * *
239902 TGATAGAATCAAAGTTGTCTCTTAAATAAGGCAAA-ATTGAATACTCATACTAATC-CCTATTCC
66 TGATA-AATCAAAGTTGTCTCTTAAATGAGACAAACA-TG-ATTCTCGTACTAATCTCC-ATT-C
239965 TTTT-AGGATTAGGCACCATAAACATAGT-CT
126 TTTTCAGGATTAGGCACCATAAACATA-TCCT
* * * * * *
239995 TCTCATAAGGATACATGATC-TTGATGCTTTGGTTTCGC-AG-GATACGCTTTCTTCCCCACAAT
1 TTTCATTAGGATACATGA-CATTGATGCTTTGGTTTCGCAAGAGAAAC-TTTTCTT-TCCACCAT
* * * * * * * *** *
240057 TTTTG-TAAAGT-ATGAGTTAAT-TGCTCAAATGAGACAAACACGGATTCTTGCAGGGATCTTCA
63 TATTGATAAA-TCA-AAGTT-GTCT-CTTAAATGAGACAAACA-TGATTCTCGTACTAATCTCCA
* * * *
240119 TTCATTTT--GTGATTAGGCACTATATACACATTCT
123 TTC-TTTTCAG-GATTAGGCACCATAAACATATCCT
** * * * * * ** * * * ** *
240153 CCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATG-GAAATCTTCTCTTT--GTCATTT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAA-CTTTTCTTTCCACCATTA
** * ** * * *
240215 TTCCTTAATATCAAAGTTTGTACT-TTAAACGAGACATGCGTTGATTCTCGCA-AAAGTCTCCAT
65 TT-GATAA-ATCAAAG-TTGT-CTCTTAAATGAGACAAAC-ATGATTCTCGTACTAA-TCTCCAT
* * * * * * * *
240278 TCTTTTAAAGATTGGGAACCAAAAACACATTCA
124 TCTTTTCAGGATTAGGCACCATAAACATATCCT
* * * * **
240311 TTTCATTAGGATACATGACATTGAGGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTGC
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACCATTAT
* * * * * **
240376 TGATAGAATCAAAGTTGTCTCTT-AATGAACACAAATATGAATACTCATACTAATCTACATTCCA
66 TGATA-AATCAAAGTTGTCTCTTAAATG-AGACAAACATG-ATTCTCGTACTAATCTCCATTCTT
*
240440 TTCAGGTTTAGGCACCATAAACATAGT-CT
128 TTCAGGATTAGGCACCATAAACATA-TCCT
* * * ** * * ** * *
240469 TCTCATAAGGATACATGATC-TTGTTGCTTTCATTTCGCAACATACGC-TTTCTTCCCCCCAATT
1 TTTCATTAGGATACATGA-CATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACC-ATT
* * * * * * * *** *
240532 TTTG-TAAAGT-ATGAGTT-TATTCCTCAAAAGAGAC-AACATGGATTGTTGTAGGGATCTTCAT
64 ATTGATAAA-TCA-AAGTTGT-CT-CTTAAATGAGACAAACAT-GATTCTCGTACTAATCTCCAT
* * * * *
240593 TCATTTC-GTGATTAGGCACTATAAATACATTCT
124 TCTTTTCAG-GATTAGGCACCATAAACATATCCT
** * * * * * ** * * * * **
240626 CCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATG-GAAATTTTTGCTTTGTC-TTATT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAACTTTT-CTTT-CCACCATT
** * ** *
240689 -TTCCTTAAAATCAAAGTTTGTAC-ATTAAATGAGACATGCATTGATTCTCGTA-AAAGTCTCCA
64 ATT-GAT-AAATCAAAG-TTGT-CTCTTAAATGAGACAAACA-TGATTCTCGTACTAA-TCTCCA
** * * * * * *
240751 TT-TTTTCAACATTGGGAATCAAAAACACATTCT
123 TTCTTTTCAGGATTAGGCACCATAAACATATCCT
* * * * **** * * **
240784 CTTT-ATTAGGATACAAGACAATGATGTTTTAGTGGAACAAGAGAAGCTTTTCCTTCCATTATTA
1 -TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACCATTA
* * * *
240848 TTGATAGAATCAAAGTTCCTCTCTTAAATAAGACAAACATGAATACTCATACTAATC-CACATTC
65 TTGATA-AATCAAAGTT-GTCTCTTAAATGAGACAAACATG-ATTCTCGTACTAATCTC-CATTC
* *
240912 TTTTCAGGATTAGGCACGATAAACAAAGT-CT
126 TTTTCAGGATTAGGCACCATAAACATA-TCCT
* * * * * *
240943 TCTAATAAGGATACATGATATTGATGCTTTGGTTTCAC-A-AGAAACATTTTCTTCCCACCAATT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAAC-TTTTCTTTCCACC-ATT
* * ** * * * *
241006 TTTG-TAAATTCAAATTTCGTGC-CCCAAATGGGACAAGCGTGGATTC-CAGT--TAGGATCTTC
64 ATTGATAAA-TCAAAGTT-GT-CTCTTAAATGAGACAAACAT-GATTCTC-GTACTA--ATCTCC
** * * *
241066 ATTCAATTCATGATTAGGCACTACA-AAACACATTCT
122 ATTCTTTTCAGGATTAGGCAC--CATAAACATATCCT
** * * * * ** * * **
241102 TCCCATTAGGAAAAATGATATTGATGGTTTTCTTTTGC--GTAGTAATCTTTTCTTTGCC-TTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAG-AG-AAACTTTTCTTT-CCACCAT
** ** * * *
241164 T-TTCCTTAAAATCAAAGTTTGTACT-TTAAATGAGACACGCGTTGATTCTCGCA-AAAGTCTCC
63 TATT-GAT-AAATCAAAG-TTGT-CTCTTAAATGAGACAAAC-ATGATTCTCGTACTAA-TCTCC
* * * *
241226 ATTCTTTTCAAGATTAGGAACCA-AGAACAAATTCT
122 ATTCTTTTCAGGATTAGGCACCATA-AACATATCCT
* *
241261 TTTCATTAGGATACATGACATTGATGCTTTGGTGTT-GCAAGAGAAGCTTTTCTTTCCACCGTTA
1 TTTCATTAGGATACATGACATTGATGCTTTGGT-TTCGCAAGAGAAACTTTTCTTTCCACCATTA
* * * *
241325 TTGATAGAATCAAAATTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATC-CCTATTCT
65 TTGATA-AATCAAAGTTGTCTCTTAAATGAGACAAACATG-ATTCTCGTACTAATCTCC-ATTCT
* *
241389 TTTCAGGATTAGGCATCATAAACATAGCCT
127 TTTCAGGATTAGGCACCATAAACATATCCT
* * * *
241419 TTTCATAAGGATACATGA-ACTTGATGCTTTGG-TTCGC-AG-GATACGCTTTCTTCCCACCAAT
1 TTTCATTAGGATACATGACA-TTGATGCTTTGGTTTCGCAAGAGAAAC-TTTTCTTTCCACC-AT
* * * * * * *** *
241480 TTTTG-TAAGGT-ATGAGTTCAT-TGCTCAAATGAGACAAACATGGATTCTTC-CAGGGATCTTC
63 TATTGATAA-ATCA-AAGTT-GTCT-CTTAAATGAGACAAACAT-GATTC-TCGTACTAATCTCC
* * * * *
241541 ATTCATATC-GTGATTAGGCACTATAAACACATTCT
122 ATTCTTTTCAG-GATTAGGCACCATAAACATATCCT
** * * * * * ** * * * **
241576 CCTCTTTAGAATAAATGATATTTATTG-TTTTCTTTTGCATG-GAAATCTTTTCTTTGTC-TTAT
1 TTTCATTAGGATACATGACATTGA-TGCTTTGGTTTCGCAAGAGAAA-CTTTTCTTT-CCACCAT
** * ** * *
241638 T-TTCCTTAAAATCAAAGTT-TATACTTTAAATGAGACATGCATCGATTCTCGCA-AAAGTCTCC
63 TATT-GAT-AAATCAAAGTTGTCT-C-TTAAATGAGACAAACAT-GATTCTCGTACTAA-TCTCC
* * * * ** ***
241700 ATTCTTTTCAAGATTGGGAACCAAAAACACCTTAA
122 ATTCTTTTCAGGATTAGGCACCATAAACATATCCT
* * * *
241735 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCATCATTGT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACCATTAT
* * * * * *
241800 TGATAGAATCAAAGTTGTCGCTTAAATAAGACAAATATGAATTATCATACTAATC-CACATTCCT
66 TGATA-AATCAAAGTTGTCTCTTAAATGAGACAAACATG-ATTCTCGTACTAATCTC-CATTCTT
*
241864 TTCAGGATTAAGCACCATAAACATAGT-CT
128 TTCAGGATTAGGCACCATAAACATA-TCCT
* * * * ** *
241893 TCTCATAAGGATACATGATC-TTGATGCTTTGGTTTTGCAAGATACGC-TTTCTTCCCACCAATT
1 TTTCATTAGGATACATGA-CATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACC-ATT
* * * * * * * *** **
241956 TTTG-TAAAGCATGAGTT-TATTGCTCAAATGAGACAAACATCGATTCTTGCAAGGATCTTTATT
64 ATTGATAAATCA-AAGTTGT-CT-CTTAAATGAGACAAACAT-GATTCTCGTACTAATCTCCATT
* * * *
242019 CATTTC-GTGATTAGGCACTATAAACACATTCT
125 CTTTTCAG-GATTAGGCACCATAAACATATCCT
** * * * * * ** * * **
242051 CCTCTTTAGGATAAATGATATTTATGATTTTCTTTTC-CATG-GAAATCTTTTCTTTGTC-TTAT
1 TTTCATTAGGATACATGACATTGATG-CTTTGGTTTCGCAAGAGAAA-CTTTTCTTT-CCACCAT
** * * ** * *
242113 T-TTCCTTAAAATCAAAGTT-TATACTTTATATGAGACATGCATTGATTCTCGTA-AAAGTCTCT
63 TATT-GAT-AAATCAAAGTTGTCT-C-TTAAATGAGACAAACA-TGATTCTCGTACTAA-TCTCC
** * * * * * *
242175 ATTCTTTTCAACATTGGGAATCAAAAACACATTCCC
122 ATTCTTTTCAGGATTAGGCACCATAAACATA-TCCT
* * * ** * *
242211 TTT-ATAAGGATACAAGACATTGATG-TTTTGTTGTAACAAGAGAAGCTTTTCTTTCCACTATTA
1 TTTCATTAGGATACATGACATTGATGCTTTGGTT-TCGCAAGAGAAACTTTTCTTTCCACCATTA
* * *
242274 TTGATAGAATCAAAGTT-TCTCTCTCAAATAAGACAAACATGAATACTCATACTAATC-CACATT
65 TTGATA-AATCAAAGTTGTCTCT-T-AAATGAGACAAACATG-ATTCTCGTACTAATCTC-CATT
* * *
242337 CTTTTCTGGACTAGGCACCATAAACA-A--AT
125 CTTTTCAGGATTAGGCACCATAAACATATCCT
* * * * * *
242366 TCTAATAAGGATACATGATATTGATGCTTTGGTTTCAC-A-AGAAACATTTTCTTCCCACCAATT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAAC-TTTTCTTTCCACC-ATT
* ** * * * * *
242429 TTTG-TAAATTCAAA-TT-TCTTGCCCCAAATGTGACAAGCGTGGATTCTAGT--TAGGATCTTC
64 ATTGATAAA-TCAAAGTTGTC-T--CTTAAATGAGACAAACAT-GATTCTCGTACTA--ATCTCC
** * * *
242489 ATTCAATTCATGATTAGGCACTACA-AAACACATTCT
122 ATTCTTTTCAGGATTAGGCAC--CATAAACATATCCT
* * * * ** * ** **
242525 TCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCGTG-GAAATCTTTTCTTTGCC-TTATT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAA-CTTTTCTTT-CCACCATT
** ** * * *
242588 -TTCCTTAAAATCAAAGTTTGTACT-TTAAATGAGACACGCGTTGATTCTCGCA-AAAGTCTCCA
64 ATT-GAT-AAATCAAAG-TTGT-CTCTTAAATGAGACAAAC-ATGATTCTCGTACTAA-TCTCCA
* * * * *
242650 TTCTTTTGAAGATTAGGAACCAAAAACAAATTCC-
123 TTCTTTTCAGGATTAGGCACCATAAACATA-TCCT
* * *
242684 TTTCATTAGGATACATGACATTGACGCTTTGGTGTT-GCAAGAGAAGCTTTTCTTTCCACCGTTA
1 TTTCATTAGGATACATGACATTGATGCTTTGGT-TTCGCAAGAGAAACTTTTCTTTCCACCATTA
* * * * *
242748 CTGATAGAATCAAAGTTGTCTCTTAAATAATACAAACATGAATACTCATACTAATC-CCTATTCT
65 TTGATA-AATCAAAGTTGTCTCTTAAATGAGACAAACATG-ATTCTCGTACTAATCTCC-ATTCT
*** *
242812 TTTCAGGATTAGGCGTTATAAACATAGCCT
127 TTTCAGGATTAGGCACCATAAACATATCCT
* * * *
242842 TTTCATAAGGATACATGATC-TTGATGCTTTGG-TTCGC-AG-GATACGCTTTCTTCCCACCAAT
1 TTTCATTAGGATACATGA-CATTGATGCTTTGGTTTCGCAAGAGAAAC-TTTTCTTTCCACC-AT
* ** * * * * * *** *
242903 TTTTG-TGAGGT-ATGAGTTCAT-TGCTCAAATGAGACAAACATGGATTCTTGCAAGGATCTTCA
63 TATTGAT-AAATCA-AAGTT-GTCT-CTTAAATGAGACAAACAT-GATTCTCGTACTAATCTCCA
* ** * *
242965 TTCATTTC-GTGATTAGGCATTATAAACACATTCT
123 TTCTTTTCAG-GATTAGGCACCATAAACATATCCT
** * * * * * ** * * **
242999 CCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATG-GAAATCTTTTCTGTGT-C-TTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAA-CTTTTCT-T-TCCACCAT
** * ** * *
243061 T-TTCCTTAAAATTAAAGTTTGTACT-TTAAATGAGACATGCATTGATTCTCGTA-AAAGTCTCT
63 TATT-GAT-AAATCAAAG-TTGT-CTCTTAAATGAGACAAACA-TGATTCTCGTACTAA-TCTCC
** * * * * * *
243123 ATTCTTTTCAACATTGGGAATCAAAAACACATTCCC
122 ATTCTTTTCAGGATTAGGCACCATAAACATA-TCCT
* * ** * *
243159 TTT-ATTAGGATACAAGACATTGATG-TTTTGTTGTAACAAGAGAAGCTTTTCTTTCCACTATTA
1 TTTCATTAGGATACATGACATTGATGCTTTGGTT-TCGCAAGAGAAACTTTTCTTTCCACCATTA
* * * * * * * *
243222 TTGATAGAATGAAAGTCTATCTCTCAAATAAGATAAACATTAATACTCATACTAATC-CACATTC
65 TTGATA-AATCAAAGT-TGTCTCTTAAATGAGACAAACA-TGATTCTCGTACTAATCTC-CATTC
* *
243286 TTTTCTGGATTAGGCACCATAAACAAAGT-CT
126 TTTTCAGGATTAGGCACCATAAACATA-TCCT
* * * * *
243317 TCT-AATAGTGATACATGATATTGATGCTTTGGTTTCAC-A-AGAAACATTTTCTTCCCACCAAT
1 TTTCATTAG-GATACATGACATTGATGCTTTGGTTTCGCAAGAGAAAC-TTTTCTTTCCACC-AT
* * ** * * * *
243379 TTTTG-TAAATTCAAATTTCGTGC-CGCAAATGAGACAACCGTGGATTCTAGT--TAGGATCTTC
63 TATTGATAAA-TCAAAGTT-GT-CTCTTAAATGAGACAAACAT-GATTCTCGTACTA--ATCTCC
** * * *
243440 ATTCAATTCATGATTAGGCACTACA-AAACACATTCT
122 ATTCTTTTCAGGATTAGGCAC--CATAAACATATCCT
* * * * * ** * * **
243476 TCTCATTAGGATAAATGATATTTATGGTTTTCTTTTGC--GTCGAAATCTTTTCTTTGCC-TTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAG-AGAAA-CTTTTCTTT-CCACCAT
** ** *
243538 T-TTCCTTAAAATCAAAGTT-TCTACTTTAAATGAGACATGCATTGATTCTCG--CAAAGGTCTC
63 TATT-GAT-AAATCAAAGTTGTCT-C-TTAAATGAGACAAACA-TGATTCTCGTACTAA--TCTC
* * *
243599 CATTCTTTCCAAGATT-GGCAACCAAAAACACGT-TCC-
121 CATTCTTTTCAGGATTAGGC-ACCATAAACA--TATCCT
* * *
243635 TTTCACTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAACTTTTCTTTCCACCGTTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACCATTAT
* ** *
243700 TGATAGAATCAAAGTTGTCTCTTAAATAAGACAAACATGAAAACTCATACTAATC-CCATTCTTT
66 TGATA-AATCAAAGTTGTCTCTTAAATGAGACAAACATG-ATTCTCGTACTAATCTCCATTCTTT
* *
243764 TCAGGATTAGGTACCATAAACATAGCCT
129 TCAGGATTAGGCACCATAAACATATCCT
* * ** * * ** * *
243792 TCTCATAAGGATACATGATTTTGATGCTTTGGTTTCACAAGATACGC-TTTCTTCCCACCAATTT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACC-ATTA
* * * * * * * *** *
243856 TTG-TAAGGT-ATGAGTTCAT-TGCTCAAATAAGACAAACATGGATTTTTGTAGGGATCTTCATT
65 TTGATAA-ATCA-AAGTT-GTCT-CTTAAATGAGACAAACAT-GATTCTCGTACTAATCTCCATT
* * * * *
243918 CATTTCGGGATTAGGCACTATAAGCATATTCT
125 CTTTTCAGGATTAGGCACCATAAACATATCCT
** * * * * * ** * * * *
243950 GCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATG-GAAATCTTTTCTTTGTCA-TATT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAA-CTTTTCTTT-CCACCATT
** * * ** * *
244013 -TTCCTTAAAATCAAAGTTTGTACT-TTAAATTAGATATGCATTGATTCTCGCA-AAAGTCTCCA
64 ATT-GAT-AAATCAAAG-TTGT-CTCTTAAATGAGACAAACA-TGATTCTCGTACTAA-TCTCCA
* * * * ** ***
244075 TTCTTTTCAAGATTGGGAACCAAAAACACCTTAA
123 TTCTTTTCAGGATTAGGCACCATAAACATATCCT
* * * *
244109 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCATCATTGT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACCATTAT
* * * * * *
244174 TGATAGAATCAAAGTTGTCGCTTAAATAAGACAAATATGAATTATCATACTAATC-CACATTCCT
66 TGATA-AATCAAAGTTGTCTCTTAAATGAGACAAACATG-ATTCTCGTACTAATCTC-CATTCTT
*
244238 TTCAGGATTAAGCACCATAAACATAGT-CT
128 TTCAGGATTAGGCACCATAAACATA-TCCT
* * * * ** *
244267 TCTCATAAGGATACATGATC-TTGATGCTTTGGTTTTGCAAGATACGC-TTTCTTCCCACCAATT
1 TTTCATTAGGATACATGA-CATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACC-ATT
* * * * * * * *** **
244330 TTTG-TAAAGCATGAGTT-TATTGCTCAAATGAGACAAACATCGATTCTTGCAAGGATCTTTATT
64 ATTGATAAATCA-AAGTTGT-CT-CTTAAATGAGACAAACAT-GATTCTCGTACTAATCTCCATT
* * * *
244393 CATTTC-GTGATTAGGCACTATAAACACATTCT
125 CTTTTCAG-GATTAGGCACCATAAACATATCCT
** * * * * * ** * * **
244425 CCTCTTTAGGATAAATGATATTTATGATTTTCTTTTC-CATG-GAAATCTTTTCTTTGTC-TTAT
1 TTTCATTAGGATACATGACATTGATG-CTTTGGTTTCGCAAGAGAAA-CTTTTCTTT-CCACCAT
** * * ** * *
244487 T-TTCCTTAAAATCAAAGTT-TATACTTTATATGAGACATGCATTGATTCTCGTA-AAAGTCTCT
63 TATT-GAT-AAATCAAAGTTGTCT-C-TTAAATGAGACAAACA-TGATTCTCGTACTAA-TCTCC
** * * * * * *
244549 ATTCTTTTCAACATTGGGAATCAAAAACACATTCCC
122 ATTCTTTTCAGGATTAGGCACCATAAACATA-TCCT
* * ** * *
244585 TTT-ATTAGGATACAAGACATTGATG-TTTTGTTGTAACAAGAGAAGCTTTTCTTTCCACTATTA
1 TTTCATTAGGATACATGACATTGATGCTTTGGTT-TCGCAAGAGAAACTTTTCTTTCCACCATTA
* * *
244648 TTGATAGAATCAAAGTT-TCTCTCTCAAATAAGACAAACATGAATACTCATACTAATC-CACATT
65 TTGATA-AATCAAAGTTGTCTCT-T-AAATGAGACAAACATG-ATTCTCGTACTAATCTC-CATT
* * *
244711 CTTTTCTGGACTAGGCACCATAAACA-A--AT
125 CTTTTCAGGATTAGGCACCATAAACATATCCT
* * * * * *
244740 TCTAATAAGGATACATGATATTGATGCTTTGGTTTCAC-A-AGAAACATTTTCTTCCCACCAATT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAAC-TTTTCTTTCCACC-ATT
* ** * * * * *
244803 TTTG-TAAATTCAAA-TT-TCTTGCCCCAAATGTGACAAGCGTGGATTCTAGT--TAGGATCTTC
64 ATTGATAAA-TCAAAGTTGTC-T--CTTAAATGAGACAAACAT-GATTCTCGTACTA--ATCTCC
** * * *
244863 ATTCAATTCATGATTAGGCACTACA-AAACACATTCT
122 ATTCTTTTCAGGATTAGGCAC--CATAAACATATCCT
* * * * ** * ** **
244899 TCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCGTG-GAAATCTTTTCTTTGCC-TTATT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAA-CTTTTCTTT-CCACCATT
** ** * * *
244962 -TTCCTTAAAATCAAAGTTTGTACT-TTAAATGAGACACGCGTTGATTCTCGCA-AAAGTCTCCA
64 ATT-GAT-AAATCAAAG-TTGT-CTCTTAAATGAGACAAAC-ATGATTCTCGTACTAA-TCTCCA
* * * * *
245024 TTCTTTTGAAGATTAGGAACCAAAAACAAATTCC-
123 TTCTTTTCAGGATTAGGCACCATAAACATA-TCCT
* * *
245058 TTTCATTAGGATACATGACATTGACGCTTTGGTGTT-GCAAGAGAAGCTTTTCTTTCCACCGTTA
1 TTTCATTAGGATACATGACATTGATGCTTTGGT-TTCGCAAGAGAAACTTTTCTTTCCACCATTA
* * * *
245122 TTGATAGAATCAAAGTTGTCTCTTAAATAATACAAACATGAATACTCATACTAATC-CCTATTCT
65 TTGATA-AATCAAAGTTGTCTCTTAAATGAGACAAACATG-ATTCTCGTACTAATCTCC-ATTCT
*** *
245186 TTTCAGGATTAGGCGTTATAAACATAGCCT
127 TTTCAGGATTAGGCACCATAAACATATCCT
* * * *
245216 TTTCATAAGGATACATGATC-TTGATGCTTTGG-TTCGC-AG-GATACGCTTTCTTCCCACCAAT
1 TTTCATTAGGATACATGA-CATTGATGCTTTGGTTTCGCAAGAGAAAC-TTTTCTTTCCACC-AT
* ** * * * * * *** *
245277 TTTTG-TGAGGT-ATGAGTTCAT-TGCTCAAATGAGACAAACATGGATTCTTGCAAGGATCTTCA
63 TATTGAT-AAATCA-AAGTT-GTCT-CTTAAATGAGACAAACAT-GATTCTCGTACTAATCTCCA
* ** * *
245339 TTCATTTC-GTGATTAGGCATTATAAACACATTCT
123 TTCTTTTCAG-GATTAGGCACCATAAACATATCCT
** * * * * * ** * * **
245373 CCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATG-GAAATCTTTTCTGTGT-C-TTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAA-CTTTTCT-T-TCCACCAT
** * ** * *
245435 T-TTCCTTAAAATTAAAGTTTGTACT-TTAAATGAGACATGCATTGATTCTCGTA-AAAGTCTCT
63 TATT-GAT-AAATCAAAG-TTGT-CTCTTAAATGAGACAAACA-TGATTCTCGTACTAA-TCTCC
** * * * * * *
245497 ATTCTTTTCAACATTGGGAATCAAAAACACATTCCC
122 ATTCTTTTCAGGATTAGGCACCATAAACATA-TCCT
* * ** * *
245533 TTT-ATTAGGATACAAGACATTGATG-TTTTGTTGTAACAAGAGAAGCTTTTCTTTCCACTATTA
1 TTTCATTAGGATACATGACATTGATGCTTTGGTT-TCGCAAGAGAAACTTTTCTTTCCACCATTA
* * * * * * * *
245596 TTGATAGAATGAAAGTCTATCTCTCAAATAAGATAAACATTAATACTCATACTAATC-CACATTC
65 TTGATA-AATCAAAGT-TGTCTCTTAAATGAGACAAACA-TGATTCTCGTACTAATCTC-CATTC
* *
245660 TTTTCTGGATTAGGCACCATAAACAAAGT-CT
126 TTTTCAGGATTAGGCACCATAAACATA-TCCT
* * * * *
245691 TCT-AATAGTGATACATGATATTGATGCTTTGGTTTCAC-A-AGAAACATTTTCTTCCCACCAAT
1 TTTCATTAG-GATACATGACATTGATGCTTTGGTTTCGCAAGAGAAAC-TTTTCTTTCCACC-AT
* * ** * * * * *
245753 TTTTG-TAAATTCAAATTTCGTGC-CGCAAATAAGACAACCGTGGATTCTAGT--TAGGATCTTC
63 TATTGATAAA-TCAAAGTT-GT-CTCTTAAATGAGACAAACAT-GATTCTCGTACTA--ATCTCC
** * * *
245814 ATTCAATTCATGATTAGGCACTACA-AAACACATTCT
122 ATTCTTTTCAGGATTAGGCAC--CATAAACATATCCT
* * * * * ** * * **
245850 TCTCATTAGGATAAATGATATTTATGGTTTTCTTTTGC--GTCGAAATCTTTTCTTTGCC-TTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAG-AGAAA-CTTTTCTTT-CCACCAT
** ** *
245912 T-TTCCTTAAAATCAAAGTT-TCTACTTTAAATGAGACATGCATTGATTCTCG--CAAAGGTCTC
63 TATT-GAT-AAATCAAAGTTGTCT-C-TTAAATGAGACAAACA-TGATTCTCGTACTAA--TCTC
* * *
245973 CATTCTTTCCAAGATT-GGCAACCAAAAACACGT-TCC-
121 CATTCTTTTCAGGATTAGGC-ACCATAAACA--TATCCT
* * *
246009 TTTCACTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAACTTTTCTTTCCACCGTTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACCATTAT
* ** *
246074 TGATAGAATCAAAGTTGTCTCTTAAATAAGACAAACATGAAAACTCATACTAATC-CCATTCTTT
66 TGATA-AATCAAAGTTGTCTCTTAAATGAGACAAACATG-ATTCTCGTACTAATCTCCATTCTTT
* *
246138 TCAGGATTAGGTACCATAAACATAGCCT
129 TCAGGATTAGGCACCATAAACATATCCT
* * ** * * ** * *
246166 TCTCATAAGGATACATGATTTTGATGCTTTGGTTTCACAAGATACGC-TTTCTTCCCACCAATTT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACC-ATTA
* * * * * * * *** *
246230 TTG-TAAGGT-ATGAGTTCAT-TGCTCAAATAAGACAAACATGGATTTTTGTAGGGATCTTCATT
65 TTGATAA-ATCA-AAGTT-GTCT-CTTAAATGAGACAAACAT-GATTCTCGTACTAATCTCCATT
* * * * *
246292 CATTTCGGGATTAGGCACTATAAGCATATTCT
125 CTTTTCAGGATTAGGCACCATAAACATATCCT
** * * * * * ** * * * *
246324 GCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATG-GAAATCTTTTCTTTGTCA-TATT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAA-CTTTTCTTT-CCACCATT
** * ** * *
246387 -TTCCTTAAAATCAAAGTTTGTACT-TTAAATGAGATATGCATTGATTCTCGCA-AAAGTCTCCA
64 ATT-GAT-AAATCAAAG-TTGT-CTCTTAAATGAGACAAACA-TGATTCTCGTACTAA-TCTCCA
* * * *
246449 TTCTTTTCAAGATTGGGAACCAAAAAGACAT-TCC-
123 TTCTTTTCAGGATTAGGCACC-ATAA-ACATATCCT
* * * * *
246483 CTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCATCGTTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACCATTAT
* * * *
246548 TGATAGAATCAAAGTTGTCTCTTAAATAAGGCAAA-ATTGAATACTCATACTAATC-CCTATTCC
66 TGATA-AATCAAAGTTGTCTCTTAAATGAGACAAACA-TG-ATTCTCGTACTAATCTCC-ATT-C
246611 TTTT-AGGATTAGGCACCATAAACATAGT-CT
126 TTTTCAGGATTAGGCACCATAAACATA-TCCT
* * * * * *
246641 TCTCATAAGGATACATGATC-TTGATGCTTTGGTTTCGC-AG-GATACGCTTTCTTCCCCACAAT
1 TTTCATTAGGATACATGA-CATTGATGCTTTGGTTTCGCAAGAGAAAC-TTTTCTT-TCCACCAT
* * * * * * * *** *
246703 TTTTG-TAAAGT-ATGAGTTAAT-TGCTCAAATGAGACAAACACAGATTCTTGCAGGGATCTTCA
63 TATTGATAAA-TCA-AAGTT-GTCT-CTTAAATGAGACAAACA-TGATTCTCGTACTAATCTCCA
* * * *
246765 TTCATTTT--GTGATTAGGCACTATATACACATTCT
123 TTC-TTTTCAG-GATTAGGCACCATAAACATATCCT
** * * * * * ** * * * ** *
246799 CCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATG-GAAATCTTCTCTTT--GTCATTT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAA-CTTTTCTTTCCACCATTA
** * ** * * *
246861 TTCCTTAATATCAAAGTTTGTACT-TTAAACGAGACATGCGTTGATTCTCGCA-AAAGTCTCCAT
65 TT-GATAA-ATCAAAG-TTGT-CTCTTAAATGAGACAAAC-ATGATTCTCGTACTAA-TCTCCAT
* * * * * * * *
246924 TCTTTTAAAGATTGGGAACCAAAAACACATTCA
124 TCTTTTCAGGATTAGGCACCATAAACATATCCT
* * * * **
246957 TTTCATTAGGATACATGACATTGAGGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCGTTGC
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACCATTAT
* * * * *
247022 TGATAGAATCAAAGTTGTCTCTT-AATGAACACAAATATGAATACTCATACTAATC-CACATTCC
66 TGATA-AATCAAAGTTGTCTCTTAAATG-AGACAAACATG-ATTCTCGTACTAATCTC-CATTCT
* *
247085 ATTCAGGTTTAGGCACCATAAACATAGT-CT
127 TTTCAGGATTAGGCACCATAAACATA-TCCT
* * * ** * * ** * *
247115 TCTCATAAGGATACATGATC-TTGTTGCTTTCATTTCGCAACATACGC-TTTCTTCCCCCCAATT
1 TTTCATTAGGATACATGA-CATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACC-ATT
* * * * * * * *** *
247178 TTTG-TAAAGT-ATGAGTT-TATTCCTCAAAAGAGAC-AACATGGATTGTTGTAGGGATCTTCAT
64 ATTGATAAA-TCA-AAGTTGT-CT-CTTAAATGAGACAAACAT-GATTCTCGTACTAATCTCCAT
* * * * *
247239 TCATTTC-GTGATTAGGCACTATAAATACATTCT
124 TCTTTTCAG-GATTAGGCACCATAAACATATCCT
** * * * * * ** * * * * **
247272 CCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATG-GAAATTTTTGCTTTGTC-TTATT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAACTTTT-CTTT-CCACCATT
** * ** *
247335 -TTCCTTAAAATCAAAGTTTGTAC-ATTAAATGAGACATGCATTGATTCTCGTA-AAAGTCTCCA
64 ATT-GAT-AAATCAAAG-TTGT-CTCTTAAATGAGACAAACA-TGATTCTCGTACTAA-TCTCCA
** * * * * * *
247397 TT-TTTTCAACATTGGGAATCAAAAACACATTCT
123 TTCTTTTCAGGATTAGGCACCATAAACATATCCT
* * * * **** * * **
247430 CTTT-ATTAGGATACAAGACAATGATGTTTTAGTGGAACAAGAGAAGCTTTTCCTTCCATTATTA
1 -TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACCATTA
* * * *
247494 TTGATAGAATCAAAGTTCCTCTCTTAAATAAGACAAACATGAATACTCATACTAATC-CACATTC
65 TTGATA-AATCAAAGTT-GTCTCTTAAATGAGACAAACATG-ATTCTCGTACTAATCTC-CATTC
* *
247558 TTTTCAGGATTAGGCACGATAAACAAAGT-CT
126 TTTTCAGGATTAGGCACCATAAACATA-TCCT
* * * * * *
247589 TCTAATAAGGATACATGATATTGATGCTTTGGTTTCAC-A-AGAAACATTTTCTTCCCACCAATT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAAC-TTTTCTTTCCACC-ATT
* * ** * * * *
247652 TTTG-TAAATTCAAATTTCGTGC-CCCAAATGGGACAAGCGTGGATTC-CAGT--TAGGATCTTC
64 ATTGATAAA-TCAAAGTT-GT-CTCTTAAATGAGACAAACAT-GATTCTC-GTACTA--ATCTCC
** * * *
247712 ATTCAATTCATGATTAGGCACTACA-AAACACATTCT
122 ATTCTTTTCAGGATTAGGCAC--CATAAACATATCCT
** * * * * ** * ** * **
247748 TCCCATTAGGAAAAATGATATTGATGGTTTTCTTTTGCGTG-GTAATCTTTTCTTTGCC-TTATT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAG-AAACTTTTCTTT-CCACCATT
** ** * * *
247811 -TTCCTTAAAATCAAAGTTTGTACT-TTAAATGAGACACGCGTTGATTCTCGCA-AAAGTCTCCA
64 ATT-GAT-AAATCAAAG-TTGT-CTCTTAAATGAGACAAAC-ATGATTCTCGTACTAA-TCTCCA
* * * *
247873 TTCTTTTCAAGATTAGGAACCA-AGAACAAATTCT
123 TTCTTTTCAGGATTAGGCACCATA-AACATATCCT
* *
247907 TTTCATTAGGATACATGACATTGATGCTTTGGTGTT-GCAAGAGAAGCTTTTCTTTCCACCGTTA
1 TTTCATTAGGATACATGACATTGATGCTTTGGT-TTCGCAAGAGAAACTTTTCTTTCCACCATTA
* * * *
247971 TTGATAGAATCAAAATTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATC-CCTATTCT
65 TTGATA-AATCAAAGTTGTCTCTTAAATGAGACAAACATG-ATTCTCGTACTAATCTCC-ATTCT
* *
248035 TTTCAGGATTAGGCATCATAAACATAGCCT
127 TTTCAGGATTAGGCACCATAAACATATCCT
* * * *
248065 TTTCATAAGGATACATGATC-TTGATGCTTTGG-TTCGC-AG-GATACGCTTTCTTCCCACCAAT
1 TTTCATTAGGATACATGA-CATTGATGCTTTGGTTTCGCAAGAGAAAC-TTTTCTTTCCACC-AT
* * * * * * *** *
248126 TTTTG-TAAGGT-ATGAGTTCAT-TGCTCAAATGAGACAAACATGGATTCTTC-CAGGGATCTTC
63 TATTGATAA-ATCA-AAGTT-GTCT-CTTAAATGAGACAAACAT-GATTC-TCGTACTAATCTCC
* * * * *
248187 ATTCATATC-GTGATTAGGCACTATAAACACATTCT
122 ATTCTTTTCAG-GATTAGGCACCATAAACATATCCT
** * * * * * ** * * * **
248222 CCTCTTTAGAATAAATGATATTTATTG-TTTTCTTTTGCATG-GAAATCTTTTCTTTGTC-TTAT
1 TTTCATTAGGATACATGACATTGA-TGCTTTGGTTTCGCAAGAGAAA-CTTTTCTTT-CCACCAT
** * ** * * *
248284 T-TTCCTTAAAATCAAAGTT-TATACTTTAAATGAGACATGCGTCGATTCTCGCA-AAAGTCTCC
63 TATT-GAT-AAATCAAAGTTGTCT-C-TTAAATGAGACAAACAT-GATTCTCGTACTAA-TCTCC
* * * * ** ***
248346 ATTCTTTTCAAGATTGGGAACCAAAAACACCTTAA
122 ATTCTTTTCAGGATTAGGCACCATAAACATATCCT
* * * *
248381 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCATCATTGT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACCATTAT
* * * * * *
248446 TGATAGAATCAAAGTTGTCGCTTAAATAAGACAAATATGAATTATCATACTAATC-CACATTCCT
66 TGATA-AATCAAAGTTGTCTCTTAAATGAGACAAACATG-ATTCTCGTACTAATCTC-CATTCTT
*
248510 TTCAGGATTAAGCACCATAAACATAGT-CT
128 TTCAGGATTAGGCACCATAAACATA-TCCT
* * * * ** *
248539 TCTCATAAGGATACATGATC-TTGATGCTTTGGTTTTGCAAGATACGC-TTTCTTCCCACCAATT
1 TTTCATTAGGATACATGA-CATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACC-ATT
* * * * * * * *** **
248602 TTTG-TAAAGCATGAGGTTAT-TGCTCAAATGAGACAAACATCGATTCTTGCAAGGATCTTTATT
64 ATTGATAAATCA--AAGTTGTCT-CTTAAATGAGACAAACAT-GATTCTCGTACTAATCTCCATT
* * * *
248665 CATTTC-GTGATTAGGCACTATAAACACATTCT
125 CTTTTCAG-GATTAGGCACCATAAACATATCCT
** * * * * * ** * * **
248697 CCTCTTTAGGATAAATGATATTTATGATTTTCTTTTC-CATG-GAAATCTTTTCTTTGTC-TTAT
1 TTTCATTAGGATACATGACATTGATG-CTTTGGTTTCGCAAGAGAAA-CTTTTCTTT-CCACCAT
** * * ** * *
248759 T-TTCCTTAAAATCAAAGTT-TATACTTTATATGAGACATGCATTGATTCTCGTA-AAAGTCTCT
63 TATT-GAT-AAATCAAAGTTGTCT-C-TTAAATGAGACAAACA-TGATTCTCGTACTAA-TCTCC
** * * * * * *
248821 ATTCTTTTCAACATTGGGAATCAAAAACACATTCCC
122 ATTCTTTTCAGGATTAGGCACCATAAACATA-TCCT
* * ** * *
248857 TTT-ATTAGGATACAAGACATTGATG-TTTTGTTGTAACAAGAGAAGCTTTTCTTTCCACTATTA
1 TTTCATTAGGATACATGACATTGATGCTTTGGTT-TCGCAAGAGAAACTTTTCTTTCCACCATTA
* * * * * * * * *
248920 TTGATAGAATCAAATTTTATCTCTCAAATAAGATAAACATTAATACTCATACTAATC-CATATTC
65 TTGATA-AATCAAA-GTTGTCTCTTAAATGAGACAAACA-TGATTCTCGTACTAATCTC-CATTC
* *
248984 TTTTCTGGATTAGGCACCATAAACAAAGT-CT
126 TTTTCAGGATTAGGCACCATAAACATA-TCCT
* * * * * * *
249015 TCTAATAATGATACATGATATTGATGCTTTGGTTTCAC-A-AGAAACATTTTCTTCCCACCAATT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAAC-TTTTCTTTCCACC-ATT
* * ** * * ** * *
249078 TTTG-TAAATTCAAATTTTGTGC-CCCAAATGAAACAAGCATGGATTCAAGTA-AAGATCTTCAT
64 ATTGATAAA-TCAAA-GTTGT-CTCTTAAATGAGACAAACAT-GATTCTCGTACTA-ATCTCCAT
* * * *
249140 TCATTTCATGATTAGGCACTACA-AAACACATTCT
124 TCTTTTCAGGATTAGGCAC--CATAAACATATCCT
* * * * * ** * * * **
249174 TCTCGTTAGGATAAATGATATTAATAG-TTTTCTTTTGC--GTTGAAATCTTTTTTTTGCC-TTA
1 TTTCATTAGGATACATGACATTGAT-GCTTTGGTTTCGCAAG-AGAAA-CTTTTCTTT-CCACCA
** * ** * * *
249235 TT-TTCCTTAAAATCAATGTTTGTACT-TTAAATGAGACACGCGTTGATTCTCGCA-AAAGTCTC
62 TTATT-GAT-AAATCAAAG-TTGT-CTCTTAAATGAGACAAAC-ATGATTCTCGTACTAA-TCTC
* * * *
249297 CATTCTTTTCAAGATTAGGAACCAAAAACAAATTCC-
121 CATTCTTTTCAGGATTAGGCACCATAAACATA-TCCT
* * * *
249333 CTTCATTATGATACATGACATTGATGCTTTGGTGTT-GCAAGAGAAGCTTTTCTTTCCACCGTTA
1 TTTCATTAGGATACATGACATTGATGCTTTGGT-TTCGCAAGAGAAACTTTTCTTTCCACCATTA
* * *
249397 TTGATAGAATCAAAGTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATC-CCTATTCT
65 TTGATA-AATCAAAGTTGTCTCTTAAATGAGACAAACATG-ATTCTCGTACTAATCTCC-ATTCT
* ** *
249461 TTTCAGGAATAGGCATTATAAACATAGCCT
127 TTTCAGGATTAGGCACCATAAACATATCCT
* * * * *
249491 TTTCATAAGGATACATGATC-TTGATGCTTTGG-TTCAC-AG-GATACGCTTTCTTCCCACCAAT
1 TTTCATTAGGATACATGA-CATTGATGCTTTGGTTTCGCAAGAGAAAC-TTTTCTTTCCACC-AT
* * * * * * * *** *
249552 T-TTCG-TAAGGT-ATGACTTCAT-TGCTCAAATAAGACAAACATGGATTCTTGTAGGGATCTTC
63 TATT-GATAA-ATCA-AAGTT-GTCT-CTTAAATGAGACAAACAT-GATTCTCGTACTAATCTCC
* * * *
249613 ATTCATTTC-GTGATTAGGCACTATAAACACATTCT
122 ATTCTTTTCAG-GATTAGGCACCATAAACATATCCT
** * * * * * ** * * * **
249648 CCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATG-GAAATCTTTTCTTTGTC-TTATT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAA-CTTTTCTTT-CCACCATT
** * ** * *
249711 -TTCCTTAAAATCAAAGTTTGTACTAC--AGATGAGACATGCATTGATTCTCGTA-AAAGTCTCT
64 ATT-GAT-AAATCAAAG-TTGT-CT-CTTAAATGAGACAAACA-TGATTCTCGTACTAA-TCTCC
* * ** * * * * *
249772 TTTCTTTTTAACATTAGGAATCAAAAACACATTCCC
122 ATTCTTTTCAGGATTAGGCACCATAAACATA-TCCT
* * * * ** * *
249808 TTT-ATTAGGATACAAGATATTGATGTTTTAG-TGGGACAAGAGAAGCTTTTCTTTCCACTATTA
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCG-CAAGAGAAACTTTTCTTTCCACCATTA
* * *
249871 TTGATAGAATCAAAGTT-TCTCTCTCAAATAAGACAAACATGAATACTCATACTAATC-CACATT
65 TTGATA-AATCAAAGTTGTCTCT-T-AAATGAGACAAACATG-ATTCTCGTACTAATCTC-CATT
* * * *
249934 CTTTTCTGGATTACGCACCGTAAACAAAGT-CT
125 CTTTTCAGGATTAGGCACCATAAACATA-TCCT
* * * * * *
249966 TCTAATAAGGATGCATGATATTGATGCTTTGGTTT--C-AGAAGAAACATTTTCTTCCCACCAAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAG-AGAAAC-TTTTCTTTCCACC-AT
* * ** * * *** *
250028 TTTTG-TAAATTCAAATTTCGTGC-CCCAAATGAGACAAGCATGGA-T-TAGTAAGGATCTTCAT
63 TATTGATAAA-TCAAAGTT-GT-CTCTTAAATGAGACAAACAT-GATTCTCGTACTAATCTCCAT
* * * *
250089 TCATTTCATGATTAGGCACTACA-AAACACATTCT
124 TCTTTTCAGGATTAGGCAC--CATAAACATATCCT
* * * * * **
250123 TCTCATTAGGATAAATGATATTGATACAAGACATTGATGCTTTTGCGTTGCATGAGACGCTTTTC
1 TTTCATTAGGATACATGACATTGAT----G-C-TT--TG-GTTT-C---GCAAGAGAAACTTTTC
* * * * * * * * * *
250188 TTTCCACTAGTAATGATAAGATCAAAATTTGTCCCTCAAATAAGAGAAACATGAATACTCATACT
53 TTTCCACCATTATTGATAA-ATC-AAAGTTGTCTCTTAAATGAGACAAACATG-ATTCTCGTACT
* *
250253 AATC-CCTATTCTTTTTAGGATTAGGCACCCTAAACATAGT-CT
115 AATCTCC-ATTCTTTTCAGGATTAGGCACCATAAACATA-TCCT
* * * * * * * * *
250295 TCTCA-TATGGATACAAGATATTGATGATTTAGTTTTGGAAGA-AACGCTTTTC-TCCCACCAAT
1 TTTCATTA-GGATACATGACATTGATGCTTTGGTTTCGCAAGAGAA-ACTTTTCTTTCCACC-AT
* * * * * *** * *
250357 TTTTG-TAAATTCTAAGTTCGTGC-CTCAAGTGAGACAAACATGGATTCTAGTAAGGATGTTCAT
63 TATTGATAAA-TCAAAGTT-GT-CTCTTAAATGAGACAAACAT-GATTCTCGTACTAATCTCCAT
* ** * * * *
250420 TCATTTCTTGATTAGGCACTATGAACACATTCT
124 TCTTTTCAGGATTAGGCACCATAAACATATCCT
* * * * ** * **
250453 CCTT-ATTAGGATAAATGATATTGATGGTTTTCATTT-GCAGGA-AAATCTTTTCTTTGCC-TTA
1 -TTTCATTAGGATACATGACATTGAT-GCTTTGGTTTCGCAAGAGAAA-CTTTTCTTT-CCACCA
** * * * * * * *
250514 TT-TTCTTTAAAATCAAAATATTGATGGT-TTCAA-GTG------TTGATTCTCATA-AAAGTCT
62 TTATT-GAT-AAATC-AAA-GTTG-T-CTCTTAAATGAGACAAACATGATTCTCGTACTAA-TCT
* * * * *
250569 CCATTCTTTCCATGG-CTGGGAACCA-AAAGCACATTCC-
120 CCATTCTTTTCA-GGATTAGGCACCATAAA-CATA-TCCT
* * * * * * * * *
250606 CTTCATTAGGATACATGACTTTGATGCTTTGGTGTCGCAAGAGTAGCTTCTCTTGCCAGCGTTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACCATTAT
** * * * **
250671 TGATAAAATCAAAGTTTGTCTCTTAAAAAAGGCAAACTTGAATACTAATACTAATC-CACATTCT
66 TGAT-AAATCAAAG-TTGTCTCTTAAATGAGACAAACATG-ATTCTCGTACTAATCTC-CATTCT
250735 TTTCAGGATTAGGCACCATAAACATAGT-CT
127 TTTCAGGATTAGGCACCATAAACATA-TCCT
* * * ** * * *
250765 TTTCATAAGGATACATGATATTGATGCTTTGGTATCATAATA-AACAC-TTTCTTCCCACTAATT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAA-ACTTTTCTTTCCAC-CATT
* * * ** * * * *** *
250828 TTTG-TAAATTTAAATTTCGTGC-CCCAAATGAGACAAGCATTGATTTTAGTAAGGATCTTCATT
64 ATTGATAAA-TCAAAGTT-GT-CTCTTAAATGAGACAAACA-TGATTCTCGTACTAATCTCCATT
* * * * *
250891 CATTTCATGATTAGGCACTATAAACACATTCT
125 CTTTTCAGGATTAGGCACCATAAACATATCCT
* * * * ** * * * * * ** *
250923 TCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATG-GAAATCTTTGCCTTGC-CTTTTT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAA-CTTTTCTTTCCACCATTA
** ** * * *
250986 TTCCTTAAAATCAAAGCTTGTACT-TTAAATGAGACATGCGTTGATTCTCGCA-AAAGTCTCCAT
65 TT-GAT-AAATCAAAG-TTGT-CTCTTAAATGAGACAAAC-ATGATTCTCGTACTAA-TCTCCAT
* * * * * * * *
251049 TCTTCTCAAGATTGGGAACCAAAAACACATTCA
124 TCTTTTCAGGATTAGGCACCATAAACATATCCT
* *
251082 TTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCACCATTAT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACCATTAT
* * ** *
251147 TGATAGAATCAAAGTTGTCTCTTAAATAAGACAGACATGAAAACTCATACTAATC-CCATTCTTT
66 TGATA-AATCAAAGTTGTCTCTTAAATGAGACAAACATG-ATTCTCGTACTAATCTCCATTCTTT
*
251211 TCAGGATTAGGCACCATAAACATAGCCT
129 TCAGGATTAGGCACCATAAACATATCCT
* * * * * * * ** *
251239 TCTCATAAAGG-CACATGATC-TTGATGCTTTAGTTTTGCAGGATATGC-TTTCTTCCCACCAAT
1 TTTCAT-TAGGATACATGA-CATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACC-AT
* * * * * * ** *** *
251301 TTTTG-TAAGGT-ATGAGTTCAT-TGGTCAAATGAGACAAACATGGATTCTTATAGGGATCTTCA
63 TATTGATAA-ATCA-AAGTT-GTCT-CTTAAATGAGACAAACAT-GATTCTCGTACTAATCTCCA
* * * *
251363 TTCATTTC-GTGATTAGGCACTATAAACACATTCT
123 TTCTTTTCAG-GATTAGGCACCATAAACATATCCT
** * * * * * ** * * * *
251397 CCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATGA-AAATCTTTTCTTTGTCA-TATT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAA-CTTTTCTTT-CCACCATT
** * ** * *
251460 -TTCCTTAAAATCAAAGTTTGTACT-TTAAACGAGACATGCGTTGATTCTCGTA-AAAGTCTCCA
64 ATT-GAT-AAATCAAAG-TTGT-CTCTTAAATGAGACAAAC-ATGATTCTCGTACTAA-TCTCCA
* * * * * *
251522 TTCTTTTCAAGATTGGGAACCA-AAAGCACATTCA
123 TTCTTTTCAGGATTAGGCACCATAAA-CATATCCT
* * *
251556 TTTCATTAGGGTACATGACATTGATGCTTTGGTGTCG-ACAGAGAAGCTTTTCTTTCCACCATTA
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCA-AGAGAAACTTTTCTTTCCACCATTA
* * * ** *
251620 TTGATAGAATCAAAGTTGTCTCTTAAATAAGACAAATATGAATACTCAAACTAATC-CCTATTCC
65 TTGATA-AATCAAAGTTGTCTCTTAAATGAGACAAACATG-ATTCTCGTACTAATCTCC-ATTCT
251684 TTTCAGGATTAGGCACCATAAACATAGT-CT
127 TTTCAGGATTAGGCACCATAAACATA-TCCT
* * * * * *
251714 TCTCATAAGGATACATGATC-TTGATGCTTTGGTTTTGC-AG-GATACGCTTTCTTCCCACCAAT
1 TTTCATTAGGATACATGA-CATTGATGCTTTGGTTTCGCAAGAGAAAC-TTTTCTTTCCACC-AT
* * * ** ** * * *** * *
251776 TTTTG-TAAAGCATGAGTACAT-TACACAAATGAGATAAACATGGATTCTTGTAGGGATCTTCAG
63 TATTGATAAATCA-AAGT-TGTCT-CTTAAATGAGACAAACAT-GATTCTCGTACTAATCTCCAT
* ** * * *
251839 TCATTTCTTGATTAGGCACTATAAACACATTCT
124 TCTTTTCAGGATTAGGCACCATAAACATATCCT
** * * * * * ** * * * **
251872 CCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATGA-AAATCTTTTCTTTGTC-TTATT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAA-CTTTTCTTT-CCACCATT
** ** *
251935 -TTCCTTAAAATCAAAGTTTGTACT-TTAAATGAGACATGCATTGATTCTCGTA-AAAGTCTCCA
64 ATT-GAT-AAATCAAAG-TTGT-CTCTTAAATGAGACAAACA-TGATTCTCGTACTAA-TCTCCA
** * * * *
251997 TTCTTTTCAACATTAGGAACCAAAAACACATTCCC
123 TTCTTTTCAGGATTAGGCACCATAAACATA-TCCT
* * * * ** * * *
252032 TTT-ATTAGGATAAAAGACAATGATGCTTTGGTGTAACAAGAGGAGCTTTTTCTTTCCACTATTA
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAAC-TTTTCTTTCCACCATTA
* * ** * *
252096 TTGATAGGATCAAAGTTTATCTCTTAAAAAAGACAAACATGAATACTCATACTAATC-CACATTC
65 TTGATA-AATCAAAG-TTGTCTCTTAAATGAGACAAACATG-ATTCTCGTACTAATCTC-CATTC
* *
252160 TTTTCTGGATTAGGCACCATAAACAAAGT-CT
126 TTTTCAGGATTAGGCACCATAAACATA-TCCT
* * * * * *
252191 TCTAATAAGGATACATGATATTGATGCTTTGGTTTCAC-A-AGAAACATTTTCTTCCCACCAATT
1 TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAAC-TTTTCTTTCCACC-ATT
*
252254 TTTG-TAAATTCAAA
64 ATTGATAAA-TCAAA
252268 TTTTGTGCCC
Statistics
Matches: 18375, Mismatches: 5635, Indels: 4080
0.65 0.20 0.15
Matches are distributed among these distances:
150 1 0.00
151 5 0.00
152 21 0.00
153 73 0.00
154 40 0.00
155 218 0.01
156 587 0.03
157 2301 0.13
158 7149 0.39
159 6014 0.33
160 1602 0.09
161 222 0.01
162 10 0.00
163 11 0.00
164 4 0.00
165 2 0.00
166 5 0.00
168 1 0.00
170 6 0.00
171 36 0.00
172 41 0.00
173 26 0.00
ACGTcount: A:0.30, C:0.18, G:0.15, T:0.37
Consensus pattern (156 bp):
TTTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAGAGAAACTTTTCTTTCCACCATTAT
TGATAAATCAAAGTTGTCTCTTAAATGAGACAAACATGATTCTCGTACTAATCTCCATTCTTTTC
AGGATTAGGCACCATAAACATATCCT
Found at i:250228 original size:329 final size:330
Alignment explanation
Indices: 249847--250477 Score: 905
Period size: 329 Copynumber: 1.9 Consensus size: 330
249837 AGTGGGACAA
* * * *
249847 GAGAAGCTTTTCTTTCCACTATTATTGATAGAATCAAAGTTTCTCTCTCAAATAAGACAAACATG
1 GAGAAGCTTTTCTTTCCACTAGTAATGATAGAATCAAAATTTCTCCCTCAAATAAGACAAACATG
*
249912 AATACTCATACTAATCCAC-ATTCTTTTCT-GGATTACGCACCGTAAACAAAGTCTTCTAATAAG
66 AATACTCATACTAATCC-CTATTCTTTT-TAGGATTACGCACCCTAAACAAAGTCTTCTAATAAG
* * * *
249975 GATGCATGATATTGATGCTTTGGTTTCAGAAGAAAC-ATTTTCTTCCCACCAATTTTTGTAAATT
129 GATACAAGATATTGATGATTTAGTTTCAGAAGAAACGATTTTC-TCCCACCAATTTTTGTAAATT
* *
250039 CAAATTTCGTGCCCCAAATGAGACAAGCATGGA-T-TAGTAAGGATCTTCATTCATTTCATGATT
193 CAAAGTTCGTGCCCCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCATGATT
*
250102 AGGCACTACAAAACACATTCTTCTCATTAGGATAAATGATATTGATACAAGACATTGATGCTTTT
258 AGGCACTA-AAAACACATTCTCCTCATTAGGATAAATGATATTGATACAAGACATTGATGCTTTT
250167 GCGTTGCAT
322 GCGTTGCAT
* * *
250176 GAGACGCTTTTCTTTCCACTAGTAATGATA-AGATCAAAATTTGTCCCTCAAATAAGAGAAACAT
1 GAGAAGCTTTTCTTTCCACTAGTAATGATAGA-ATCAAAATTTCTCCCTCAAATAAGACAAACAT
* * * *
250240 GAATACTCATACTAATCCCTATTCTTTTTAGGATTAGGCACCCTAAACATAGTCTTCTCATATGG
65 GAATACTCATACTAATCCCTATTCTTTTTAGGATTACGCACCCTAAACAAAGTCTTCTAATAAGG
** * *
250305 ATACAAGATATTGATGATTTAGTTTTGGAAGAAACGCTTTTCTCCCACCAATTTTTGTAAATTCT
130 ATACAAGATATTGATGATTTAGTTTCAGAAGAAACGATTTTCTCCCACCAATTTTTGTAAATTCA
* * * *
250370 AAGTTCGTGCCTCAAGTGAGACAAACATGGATTCTAGTAAGGATGTTCATTCATTTCTTGATTAG
195 AAGTTCGTGCCCCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCATGATTAG
** *
250435 GCACTATGAACACATTCTCCTTATTAGGATAAATGATATTGAT
260 GCACTAAAAACACATTCTCCTCATTAGGATAAATGATATTGAT
250478 GGTTTTCATT
Statistics
Matches: 266, Mismatches: 30, Indels: 11
0.87 0.10 0.04
Matches are distributed among these distances:
328 3 0.01
329 189 0.71
330 39 0.15
331 35 0.13
ACGTcount: A:0.32, C:0.18, G:0.15, T:0.34
Consensus pattern (330 bp):
GAGAAGCTTTTCTTTCCACTAGTAATGATAGAATCAAAATTTCTCCCTCAAATAAGACAAACATG
AATACTCATACTAATCCCTATTCTTTTTAGGATTACGCACCCTAAACAAAGTCTTCTAATAAGGA
TACAAGATATTGATGATTTAGTTTCAGAAGAAACGATTTTCTCCCACCAATTTTTGTAAATTCAA
AGTTCGTGCCCCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCATGATTAGG
CACTAAAAACACATTCTCCTCATTAGGATAAATGATATTGATACAAGACATTGATGCTTTTGCGT
TGCAT
Found at i:253439 original size:476 final size:474
Alignment explanation
Indices: 252350--253956 Score: 1978
Period size: 476 Copynumber: 3.4 Consensus size: 474
252340 GATTTCATTG
* ***
252350 CTCAAATGAGACAAACATGGATTCTTGCGGGGATCTTCATTCATTTCGTGATTAGGCACTATAAA
1 CTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAA
* * * * *
252415 CACATTCTCCTCTTTAGGATAAATGATATTTATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGT
66 CACATT-TCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCCTAGAAATCTTTTCTTTGC
* * * *
252480 CATATTTTCCTTAAAATCAAAGTTTGTACTTTAAATGAGATAGGCATTGATTCTCGTAAAAGTCT
130 CTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAAAGAGACATGCATTGATTCTCGTAAAAGTCT
* * * * * *
252545 CCATTCATTTCAACATTGGGAAACAAAAACACATTCCCCTCATTAGGACACATTACATTGATGCT
195 CCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCT
* * *
252610 TTGGTGTCG-CA-AGAAAGGCTTTTCTGTCCAACGTTATCGATAAAATCAAAATTTGTCTCTTAA
260 TTGGTGTCGCCAGAGAAA--CTTTTCTCTCCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAA
* * * * * * * *
252673 ATAAGATAAAGTTGAATACTCTTAGTGAT-C-CTATT-TTTTCAGGGTTTGGCACCATTAACATA
323 ATAAGACAAACTTGAATACTCATACTAATCCACT-TTCTTTTCAGGATTAGGCACCATAAACATA
* * * * * ** * *
252735 GTCTTCTTATATGGATGCAGGATATTTATGAATTGGTTTTGCT-AGGAATGCTTT-TTCCCA-TA
387 GTCTTCTCATAAGGATACATGATATTGATGCTTTGG-TTT-CTAAGAAATGCTTTCTTCCCACCA
*
252797 ACTTTTGTAAATTCTAAGTTCATGC
450 AATTTTGTAAATTCTAAGTTCATGC
* * *
252822 CTCAAATGAGACAAACAAGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTCTAAC
1 CTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAA
* * * * *
252887 CACATACTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCGTGGACATCTTTTCTTTGA
66 CACAT-TTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCCTAGAAATCTTTTCTTTGC
* *
252952 CTTGTTTTCCTTAAAATCAAAGTTTGTACTTTAAAAGAGACATGCATTGATTCCCGTAAAAGTCT
130 CTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAAAGAGACATGCATTGATTCTCGTAAAAGTCT
* * * * * * *
253017 ACATTCTTTTCAAGATTGCGAACCAAAAACACTTTCCCTTCGTTAGGATGCATGACGTTGACGCT
195 CCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCT
* * * * * *
253082 TTGGTGTCGCCAGAGAAACTGTTCTCCCCACCGTTATTAATAGAATCAAAGTTTGTCTTTTAAAT
260 TTGGTGTCGCCAGAGAAACTTTTCTCTCCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAAT
* * *
253147 AAGACAAACATGAAT-CGTCATACTAATCCACTTTCTTTTCTGGATTAGGCACCATAAATATAGT
325 AAGACAAACTTGAATAC-TCATACTAATCCACTTTCTTTTCAGGATTAGGCACCATAAACATAGT
* *
253211 CTTCTCATAAGGATACATGATATCGACGCTTTGGTTTCATAAGAAATGCTTTCTTCCCACCAAAT
389 CTTCTCATAAGGATACATGATATTGATGCTTTGGTTTC-TAAGAAATGCTTTCTTCCCACCAAAT
* * * * *
253276 TTTGAAAAGTATAAGTACATTC
453 TTTGTAAATTCTAAGTTCATGC
* * * * *
253298 CTCAAATGAGCCAAACATGAATTCTAGTAAGGATCTTCATTCTTTTCGTGGTTAGGCACTGTAAA
1 CTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAA
* *
253363 CACATTTTCTCGAATAGGATAAATGATATTGATGGTTTTCTTTTGCCTAGAAATCTTTTCTTTGC
66 CACATTTCCTC-ATTAGGATAAATGATATTGATGGTTTTCTTTTGCCTAGAAATCTTTTCTTTGC
* * * * *
253428 CTCACTTTCCTTAAAATCAAAGTTTGTACTTTAAATA-AGATAAGCATTGATTCTCGTAAAAGTT
130 CTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAA-AGAGACATGCATTGATTCTCGTAAAAGTC
* * * * * *
253492 TCCATTCTTTCCAAGGTTGGGAACCAAAAACACATTCTCTTCATTAGGATACAAGACTTTGATTC
194 TCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGC
* * * * *
253557 TTTGGTGTCGCAAGAGAAGCTTTTCTTTCCAGCGTTATTGATAAAATCAAAGTTTGTCTCTTAGA
259 TTTGGTGTCGCCAGAGAAACTTTTCTCTCCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAA
* * *
253622 TAAGGCAAACTTGAATACTCATACTAATCCACATTCTTTTCAAGATTAGGCACCATAAACATAGT
324 TAAGACAAACTTGAATACTCATACTAATCCACTTTCTTTTCAGGATTAGGCACCATAAACATAGT
* * * ** *
253687 CTTTTCATAAGGATACATGATATTGATGCTTTGGTATCGTAATAAACACTTTCTTCCCACCAATT
389 CTTCTCATAAGGATACATGATATTGATGCTTTGGTTTC-TAAGAAATGCTTTCTTCCCACCAAAT
253752 TTTGTAAATTCTAAGTTCATGC
453 TTTGTAAATTCTAAGTTCATGC
* *
253774 CTCAAATAAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTTGTG-TTAGGCACTATAAA
1 CTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAA
* * * *
253838 CACTTTCTCCTCGTTAGGATAAATGATATTGATGGTTTTCTTTTGCGCGA-AAATCTTTTCATTG
66 CACATT-TCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGC-CTAGAAATCTTTTCTTTG
* * *
253902 CCTTATTTTCCTTAAAACCAAAGTTTGTACTTTAAATGAGGCATGCATTGATTCT
129 CCTTATTTTCCTTAAAATCAAAGTTTGTACTTTAAAAGAGACATGCATTGATTCT
253957 GTTAGCTCAA
Statistics
Matches: 967, Mismatches: 151, Indels: 31
0.84 0.13 0.03
Matches are distributed among these distances:
471 1 0.00
472 294 0.30
473 9 0.01
474 66 0.07
475 120 0.12
476 475 0.49
477 2 0.00
ACGTcount: A:0.30, C:0.18, G:0.15, T:0.37
Consensus pattern (474 bp):
CTCAAATGAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCACTATAAA
CACATTTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCCTAGAAATCTTTTCTTTGCC
TTATTTTCCTTAAAATCAAAGTTTGTACTTTAAAAGAGACATGCATTGATTCTCGTAAAAGTCTC
CATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTT
TGGTGTCGCCAGAGAAACTTTTCTCTCCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATA
AGACAAACTTGAATACTCATACTAATCCACTTTCTTTTCAGGATTAGGCACCATAAACATAGTCT
TCTCATAAGGATACATGATATTGATGCTTTGGTTTCTAAGAAATGCTTTCTTCCCACCAAATTTT
GTAAATTCTAAGTTCATGC
Found at i:254243 original size:34 final size:35
Alignment explanation
Indices: 254205--254271 Score: 102
Period size: 37 Copynumber: 1.9 Consensus size: 35
254195 CCTTACAACA
254205 CTATC-TTTC-AAGGCTAAGATAGAAACCTCTCTCT
1 CTATCTTTTCAAAGGCTAAGATAG-AACCTCTCTCT
254239 CTATCTTTTTCAAAGGCTAAGATAGAACCTCTC
1 CTATC-TTTTCAAAGGCTAAGATAGAACCTCTC
254272 AATCATTTAG
Statistics
Matches: 30, Mismatches: 0, Indels: 4
0.88 0.00 0.12
Matches are distributed among these distances:
34 5 0.17
36 12 0.40
37 13 0.43
ACGTcount: A:0.30, C:0.25, G:0.12, T:0.33
Consensus pattern (35 bp):
CTATCTTTTCAAAGGCTAAGATAGAACCTCTCTCT
Found at i:254850 original size:21 final size:22
Alignment explanation
Indices: 254796--254874 Score: 105
Period size: 21 Copynumber: 3.8 Consensus size: 22
254786 CATGAATAGT
* *
254796 GATACATGAACAGT-ATGAATA
1 GATACATGAACAGTGATGTATC
254817 G-T--ATGAACAGTGATGTATC
1 GATACATGAACAGTGATGTATC
254836 GATACATGAA-AGTGATGTATC
1 GATACATGAACAGTGATGTATC
254857 GATACATGAACAGTGATG
1 GATACATGAACAGTGATG
254875 AATAGTGATG
Statistics
Matches: 51, Mismatches: 2, Indels: 9
0.82 0.03 0.15
Matches are distributed among these distances:
18 9 0.18
19 6 0.12
20 2 0.04
21 22 0.43
22 12 0.24
ACGTcount: A:0.39, C:0.10, G:0.24, T:0.27
Consensus pattern (22 bp):
GATACATGAACAGTGATGTATC
Found at i:254881 original size:10 final size:10
Alignment explanation
Indices: 254862--254892 Score: 53
Period size: 10 Copynumber: 3.1 Consensus size: 10
254852 GTATCGATAC
254862 ATGAACAGTG
1 ATGAACAGTG
*
254872 ATGAATAGTG
1 ATGAACAGTG
254882 ATGAACAGTG
1 ATGAACAGTG
254892 A
1 A
254893 ATATGAGATT
Statistics
Matches: 19, Mismatches: 2, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
10 19 1.00
ACGTcount: A:0.42, C:0.06, G:0.29, T:0.23
Consensus pattern (10 bp):
ATGAACAGTG
Found at i:254982 original size:53 final size:53
Alignment explanation
Indices: 254916--255052 Score: 238
Period size: 53 Copynumber: 2.6 Consensus size: 53
254906 CTACTGCCAA
254916 TGTATCGATACATATTTTGTGTATCGATACAAATTTGGCTACTGCCAATGACC
1 TGTATCGATACATATTTTGTGTATCGATACAAATTTGGCTACTGCCAATGACC
* * *
254969 TGTATTGATACATATTGTGTGTATCGATACAAATTTGGCTACTGCCAATGTCC
1 TGTATCGATACATATTTTGTGTATCGATACAAATTTGGCTACTGCCAATGACC
255022 TGTATCGATACATATTTGTGTGTATCGATAC
1 TGTATCGATACATATTT-TGTGTATCGATAC
255053 TATGCAATCT
Statistics
Matches: 78, Mismatches: 5, Indels: 1
0.93 0.06 0.01
Matches are distributed among these distances:
53 65 0.83
54 13 0.17
ACGTcount: A:0.27, C:0.17, G:0.18, T:0.38
Consensus pattern (53 bp):
TGTATCGATACATATTTTGTGTATCGATACAAATTTGGCTACTGCCAATGACC
Found at i:255085 original size:20 final size:20
Alignment explanation
Indices: 255022--255092 Score: 74
Period size: 20 Copynumber: 3.5 Consensus size: 20
255012 GCCAATGTCC
**
255022 TGTATCGATACATATTTGTG
1 TGTATCGATACATATTAATG
* *
255042 TGTATCGATAC-TATGCAATC
1 TGTATCGATACATAT-TAATG
255062 TGTATCGATACAT-TTAAATG
1 TGTATCGATACATATT-AATG
255082 TGTATCGATAC
1 TGTATCGATAC
255093 TTTTCAGGGT
Statistics
Matches: 42, Mismatches: 6, Indels: 6
0.78 0.11 0.11
Matches are distributed among these distances:
19 3 0.07
20 38 0.90
21 1 0.02
ACGTcount: A:0.30, C:0.14, G:0.17, T:0.39
Consensus pattern (20 bp):
TGTATCGATACATATTAATG
Found at i:256083 original size:476 final size:476
Alignment explanation
Indices: 255180--257067 Score: 2408
Period size: 476 Copynumber: 4.0 Consensus size: 476
255170 TATTTTTACT
* *
255180 TAGAA-AAATGATATTGATGGTTTTCTTTTGCATGGAAATCTTTTCTTTGCTTTATTTTCCTTAA
1 TAGAATAAATGATATTGATGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAA
* * * *
255244 AATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCATAAAAGTTTCCATTCTTTCCACG
66 AATCAAAGTTTGCACTTTAAATGAGACATGCATTGATTCTCATAAAAGTCTCCATTCTTTTCAAG
* *
255309 ATTGGGAACC-AAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTTGCAAGA
131 ATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGA
* * * *
255373 GAAGCTTTTCTTTCCAACATTATTTATAGAATCAATGTTTGTTTCTTAAATAAGACAAACTTAAA
196 GAAGCTTTTCTTTCCAACATTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACTTGAA
* * * *
255438 TAGTCTTACTAATCCACATTATTTTTTA-GATTAGGCACCAAAAACATAGTCTTGTCATAAGAAT
261 TACTCATACTAATCCACATT-CTTTTTAGGATTAGGCACCAAAAACATAGTCTTCTCATAAGAAT
* * * *
255502 ACATGATATTGATGCTTTGGTTTTGTAAGAAACGCTCTGTTCCCACCAATTTTTGAAAAGTATAA
325 ACAAGATATTGATGATTTGGTTTCGTAAGAAACGCTCTTTTCCCACCAATTTTTGAAAAGTATAA
* * * * ** *
255567 GTTTATTCCTCAAATGAGACAAATATGGATTCTGGTAAGGATCTTTGTTCATTTCGTGATTAGTC
390 GTTCATTCCTCAAATAAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGC
*
255632 ACTATAAACACATTCTCCTCAC
455 ACTATAAACACATTCTCCTCAA
* ** *
255654 TAGAATAAATGATATTGGTGGTTTTCTTTTGTGTTAAAATCTTTTCTTTGCCTTATTTTCCTTAA
1 TAGAATAAATGATATTGATGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAA
* * * * * * * *
255719 AACCAAACTTTACACTTTGAATGAGGCATGCACTGATTCTCGTAAAAGTCCCCATTCTTTTCAAG
66 AATCAAAGTTTGCACTTTAAATGAGACATGCATTGATTCTCATAAAAGTCTCCATTCTTTTCAAG
* * * *
255784 ATTGGGAACCAAAAGCACATGCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGA
131 ATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGA
* * * * *
255849 GAAGCTGTTCTTTCCATCGTTATTTATAGAATCATAGTTTGTCTCTTAAATAAGACAAACTTGAA
196 GAAGCTTTTCTTTCCAACATTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACTTGAA
* * * *
255914 TAGTCATACTAATCCACATTCTTTTCTA-GATTAGGCTCTAGAAACATAGTCTTCTCATAAGAAT
261 TACTCATACTAATCCACATTCTTTT-TAGGATTAGGCACCAAAAACATAGTCTTCTCATAAGAAT
* * * * *
255978 ACATGATATTGATGCTTTGGTTTCATAAAAAACGCTCTTTTCCCACTAATTTTTGAAAAGTATAA
325 ACAAGATATTGATGATTTGGTTTCGTAAGAAACGCTCTTTTCCCACCAATTTTTGAAAAGTATAA
* * * *
256043 GTTCATTCCTCAAATGAGACAAACATAGCTTCTAGTAAGGATCTTTATTCATTTCGTGATTAGGC
390 GTTCATTCCTCAAATAAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGC
* *
256108 ACAATAAACACATTTTGCC-CAA
455 ACTATAAACACATTCT-CCTCAA
* * *
256130 TAGGATAAATGATATTGATGGTTTTCTTTTGC-TAGGAAATCTTTTCTTTGCCTTATTTTCATTA
1 TAGAATAAATGATATTGATGGTTTTCTTTTGCAT-GAAAATCTTTTCTTTGCCTTATTTTCCTTA
* *
256194 AAATCAAAGTTTGTACTTTAAATGAGACATGCATTGATTCTCATAAAAGT-T---TTTTTTTCCA
65 AAATCAAAGTTTGCACTTTAAATGAGACATGCATTGATTCTCATAAAAGTCTCCATTCTTTT-CA
* * *
256255 AGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTTGCGTTGCAA
129 AGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAA
* * *
256320 GAGAAGCTTTTCTTTCC-ACTATTAATGATA-AGATCAAAATTTGTC-CTTTAAATAAGAGAAAC
194 GAGAAGCTTTTCTTTCCAAC-ATTATTGATAGA-ATCAAAGTTTGTCTC-TTAAATAAGACAAAC
* * * ** *
256382 ATGAATACTCATACTAATCCCCGTTCTTTTTAGGATTAGGCACCCCAAACATAGTCTTCTCATAT
256 TTGAATACTCATACTAATCCACATTCTTTTTAGGATTAGGCACCAAAAACATAGTCTTCTCATAA
* * * * * * * *
256447 GGATAGAAGATATTAATGATTTAGCTTT-GCAAGAAACGCTTTTTTCCCACCAATTTTTGTAAAT
321 GAATACAAGATATTGATGATTT-GGTTTCGTAAGAAACGCTCTTTTCCCACCAATTTTTGAAAAG
* * * * *
256511 TCTAAGTTCGTGCCTCAAGTAAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCCTGAT
385 TATAAGTTCATTCCTCAAATAAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGAT
* *
256576 TAGGCACTATTAACACATTCTCCTCAT
450 TAGGCACTATAAACACATTCTCCTCAA
* * * *
256603 TAGGATAAATGATATTGATGGTTTTCCTTTGCATGAAAATCTTTTCTTTGCCTTATTTTTCGTAA
1 TAGAATAAATGATATTGATGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAA
* * *** *
256668 AATCAAAGTTTGCACTTTAAATGGGACATGCATTGATTCTCGTAAAAGTCTTTTTTCTTTTGAAG
66 AATCAAAGTTTGCACTTTAAATGAGACATGCATTGATTCTCATAAAAGTCTCCATTCTTTTCAAG
* * * *
256733 ATTAGGAACTAAAAACACATTCTCTTCGTTAGGATGCATGACATTGATGCTTTGGTGTCGCAAGA
131 ATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGA
* * * *
256798 GAAGCTTCTCTTTCCAACGTTATTGATAAAATCAAAGTTTGTCTCTTAAATAAGGCAAACTTGAA
196 GAAGCTTTTCTTTCCAACATTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACTTGAA
* ** * *
256863 TACTCATACTAATCCACATTCTATTTAGGATTAGGCACCCTAAACATAGTCTTCTCATACGGATA
261 TACTCATACTAATCCACATTCTTTTTAGGATTAGGCACCAAAAACATAGTCTTCTCATAAGAATA
* * * * * *
256928 CAAGATATTGATGATTTAGTTTTGCAAGAAACG--C--TTCCCACCAATTTTTGTAAATTCTAAG
326 CAAGATATTGATGATTTGGTTTCGTAAGAAACGCTCTTTTCCCACCAATTTTTGAAAAGTATAAG
* * * *
256989 TTCGTACCTCAAATAAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCATGATTAGGCC
391 TTCATTCCTCAAATAAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCA
257054 CTATAAACACATTC
456 CTATAAACACATTC
257068 CCGTTATTAG
Statistics
Matches: 1238, Mismatches: 155, Indels: 44
0.86 0.11 0.03
Matches are distributed among these distances:
472 114 0.09
473 387 0.31
474 11 0.01
475 124 0.10
476 590 0.48
477 12 0.01
ACGTcount: A:0.31, C:0.17, G:0.14, T:0.37
Consensus pattern (476 bp):
TAGAATAAATGATATTGATGGTTTTCTTTTGCATGAAAATCTTTTCTTTGCCTTATTTTCCTTAA
AATCAAAGTTTGCACTTTAAATGAGACATGCATTGATTCTCATAAAAGTCTCCATTCTTTTCAAG
ATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGA
GAAGCTTTTCTTTCCAACATTATTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACTTGAA
TACTCATACTAATCCACATTCTTTTTAGGATTAGGCACCAAAAACATAGTCTTCTCATAAGAATA
CAAGATATTGATGATTTGGTTTCGTAAGAAACGCTCTTTTCCCACCAATTTTTGAAAAGTATAAG
TTCATTCCTCAAATAAGACAAACATGGATTCTAGTAAGGATCTTCATTCATTTCGTGATTAGGCA
CTATAAACACATTCTCCTCAA
Found at i:263856 original size:22 final size:22
Alignment explanation
Indices: 263831--263873 Score: 86
Period size: 22 Copynumber: 2.0 Consensus size: 22
263821 AATTTTGGCA
263831 TTTGACAAAGGGGGAGAAATTT
1 TTTGACAAAGGGGGAGAAATTT
263853 TTTGACAAAGGGGGAGAAATT
1 TTTGACAAAGGGGGAGAAATT
263874 ATTGAAAAAT
Statistics
Matches: 21, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
22 21 1.00
ACGTcount: A:0.37, C:0.05, G:0.33, T:0.26
Consensus pattern (22 bp):
TTTGACAAAGGGGGAGAAATTT
Found at i:263878 original size:21 final size:22
Alignment explanation
Indices: 263832--263878 Score: 78
Period size: 22 Copynumber: 2.2 Consensus size: 22
263822 ATTTTGGCAT
*
263832 TTGACAAAGGGGGAGAAATTTT
1 TTGACAAAGGGGGAGAAATTTA
263854 TTGACAAAGGGGGAGAAA-TTA
1 TTGACAAAGGGGGAGAAATTTA
263875 TTGA
1 TTGA
263879 AAAATTATTT
Statistics
Matches: 24, Mismatches: 1, Indels: 1
0.92 0.04 0.04
Matches are distributed among these distances:
21 6 0.25
22 18 0.75
ACGTcount: A:0.38, C:0.04, G:0.32, T:0.26
Consensus pattern (22 bp):
TTGACAAAGGGGGAGAAATTTA
Found at i:265596 original size:477 final size:476
Alignment explanation
Indices: 264304--269499 Score: 6206
Period size: 477 Copynumber: 10.9 Consensus size: 476
264294 TTTGTTCTAC
* * * * * *
264304 AATCAAAGTTCATGCCATAAATAAGCCAAGCATCGATTCTTGTAACAGGCTCCAATCTTTTCAAG
1 AATCAAAGTTCATACCTTAAATAAGACAAGCATCGATTCTTGTAACTGTCTCCATTCTTTTCAAG
* * *
264369 ACTAGGAAGCCAACAA-CACATTCCCTTCATTAGGATACATCAAATTGCTGCTTTGGTGTCGCAA
66 ACTAGGAAGCCAA-AAGCACATTCCCTTCATTAGGA-ACATGACATTGATGCTTTGGTGTCGCAA
* * * * * * * * *
264433 GAAAAGCTTTTCTTTCCATCG-ATTTGATAGAGTCACAGTTTGTCTCTTAAAAACGACAAA-ATT
129 GAAAAGCTTTTCTTTTCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGAAAAACATG
* * *
264496 AACACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGA
194 AATACTCATACTAATGCCCATCCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGA
* * * *
264561 TACATGATATTGATGCTTTGGTCTCGCAAGAAAGGCAATTTTT-CCATCAATTTTAGTAAAGTCT
259 TACACGATATTGATGCTTTGGTTTCGCAAGAAAGGC-ATTTTTCCCACCAATTTTTGTAAAGTCT
* * *
264625 AAGTTCATGCGTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGGGATTAG
323 AAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAG
* * * * *
264690 GTACTGTAAACACATTCTCCTCATCAGGATAAATGATATTGATGATTTT-TTTTACTTGGAAATC
388 GCACTGTAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGGAATC
* *
264754 ATTTCTTTGCCCTATTTTCCTTTA
453 TTTTCTTTGCCCTATTTTCCTTCA
* * *
264778 AATCAAAGTTCATACCTTAAATAAGGCAAGCATCGATTCTTGTAATTTTCTCCATTCTTTTCAAG
1 AATCAAAGTTCATACCTTAAATAAGACAAGCATCGATTCTTGTAACTGTCTCCATTCTTTTCAAG
* * ***
264843 ACTAGGAAGCCAAAAGCACAATCCCTTCATTAGGATACTTGACATTGATGCTTTGGTGTCATGAG
66 ACTAGGAAGCCAAAAGCACATTCCCTTCATTAGGA-ACATGACATTGATGCTTTGGTGTCGCAAG
* * *
264908 AAATGCTTTTC-TTTCGACCGTATTTT-ATAGAATCAAAGTTTGTCCCTTAAATATGAAAAACAA
130 AAAAGCTTTTCTTTTC-ACCGT-TTTTGATAGAATCAAAGTTTGTCTCTTAAATATGAAAAACAT
* * * * *
264971 GAATACTCACACTGATGCCCATCCTTTTCAAGATTACGCACCATAAACATAGTCTTCTTC-CTAG
193 GAATACTCATACTAATGCCCATCCTTTTCAGGATTAGGCACCATAAACATAGTCTTC-TCATTAG
* * *
265035 GATACACGATATTGATGCTTTCGTTTCGCAACAAAGGTATTTTTCCCACCAATTTTTGTAAAGTC
257 GATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGTC
* * * * *
265100 TATGTTCGTGCCTCAAATGAAACAAACATTGATTCTAGCAATGATCTTCATCCATTTTGTGATTA
322 TAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTA
* * *
265165 AGCACTGTAAACACATTCTCCTCATTAGGATAGATGAAATTGATGATTTTCTTTTGCATGGGAAT
387 GGCACTGTAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGGAAT
* * *
265230 GTTTTCTTTACCCTATTTTTCTTCA
452 CTTTTCTTTGCCCTATTTTCCTTCA
*
265255 AATCAAAGTTCATACCTTAAATAAGACAAGCATCGATTCTTGTAACTGTCTCTATTCTTTTCAAG
1 AATCAAAGTTCATACCTTAAATAAGACAAGCATCGATTCTTGTAACTGTCTCCATTCTTTTCAAG
* * * *
265320 ACTAGGAAGCCAAAAGCACATTCCCTTCCTTAGG-A-A-GACAATGAAGCTTTGGTGTCGTAAGA
66 ACTAGGAAGCCAAAAGCACATTCCCTTCATTAGGAACATGACATTGATGCTTTGGTGTCGCAAGA
* ** *
265382 AATGCTTTTCTTTTCACCGTTTTTTTTAGAATCAAAGTTTGCCTCTTAAATATGAAAAACATGAA
131 AAAGCTTTTCTTTTCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGAAAAACATG--
* * * * *
265447 TAATACTCACACTGATGCCCATCCTTTTCAGGATTAGGCATCGTAAACATAGTCTTCTCATTAGA
194 -AATACTCATACTAATGCCCATCCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGG
* * * *
265512 ATACACAACATTAATGCTTTGGTTTCGCAAGAAAGGTAATTTTTCCCACCAATTTTTGTAAAGTC
258 ATACACGATATTGATGCTTTGGTTTCGCAAGAAAGG-CATTTTTCCCACCAATTTTTGTAAAGTC
** * * *
265577 TTTGTTCGTGCCCCAAATGAAACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTG
322 TAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTA
** *
265642 GGCACAATAAACACATTCTCCTCATTAGGATAAAT-AGTATTCATGATTTTCTTTTGCATGGGAA
387 GGCACTGTAAACACATTCTCCTCATTAGGATAAATGA-TATTGATGATTTTCTTTTGCATGGGAA
265706 TCTTTTCTTTGCCCTATTTTCCTTCA
451 TCTTTTCTTTGCCCTATTTTCCTTCA
* * * * ** *
265732 ATTCTAAGTTCATACCTTATATAAGGCAAGCATCGATTCTCATAA-TAGTCTCCACTCTTTTCAA
1 AATCAAAGTTCATACCTTAAATAAGACAAGCATCGATTCTTGTAACT-GTCTCCATTCTTTTCAA
* * * **
265796 GACTAAGAAGCCAAAAACACATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGGGTTACAA
65 GACTAGGAAGCCAAAAGCACATTCCCTTCATTAGG-AACATGACATTGATGCTTTGGTGTCGCAA
* * * *
265861 GAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAACTACGACAAACATG
129 GAAAAGCTTTTCTTTTCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGAAAAACATG
* * * * * * *
265926 AATACTCATACTAATGCTCACCCTTTTCAAGATTAGGCAGCATAAACATAGTCTTTTAATTATGA
194 AATACTCATACTAATGCCCATCCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGA
** * * * * * *
265991 TATGCGATATTCATGCTTTAGTTTCACAAGAAAGGCATTTTTCCCACCAAATTTCGTAAAGTTTA
259 TACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGTCTA
* * * * *
266056 AGTTTGTGCCTCAAATGAGACAAACATAGAATCTAGTAATGATTTTCATTCAATTTGTGATTA-G
324 AGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGG
266120 CACTGTAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGGAATCT
389 CACTGTAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGGAATCT
*
266185 TTTCTTTGCCCTGTTTTCCTTCA
454 TTTCTTTGCCCTATTTTCCTTCA
* ** * *
266208 AATCAAAGTTCATACCTTAAATAAGACAAGCATTGATTCTCATAACAGTCTCCTTTCTTTTCAAG
1 AATCAAAGTTCATACCTTAAATAAGACAAGCATCGATTCTTGTAACTGTCTCCATTCTTTTCAAG
* * * * * * *
266273 ATTGGGAAGCCCAAAA-CACTTTCCCTCCATTGGGATAAATGACATTGATGCTTTGGTATCGCAA
66 ACTAGGAAG-CCAAAAGCACATTCCCTTCATTAGGA-ACATGACATTGATGCTTTGGTGTCGCAA
* * * * *
266337 GAAAAGCTTTTCTTTTCAGCATTTTTGATAGAATCAAAGTTTGTCTTTTAACTA-CAACAAACAT
129 GAAAAGCTTTTCTTTTCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGAA-AAACAT
* * * * * *
266401 GTAATGTATACTCATACTAAT-CCCTGTTCC-TTTCAGGATTAGACGCCATAAAAATAGCCTTGT
193 G--A---ATACTCATACTAATGCCC--ATCCTTTTCAGGATTAGGCACCATAAACATAGTCTTCT
*
266464 CATTAGGATACATC-ATATTGATGCTTTGGTTAT-GCAAGAAAGGCA-TTTTCCCACCAATTTTA
251 CATTAGGATACA-CGATATTGATGCTTTGGTT-TCGCAAGAAAGGCATTTTTCCCACCAATTTTT
* * *
266526 GTAAAGTCTAAGTTCATGCCTTAAATGAGACAAACATGGATTCTCGTAATGATCTTCATTCA---
314 GTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTT
* *
266588 -ATGATTAGGCACTGTAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTTTTTTTG
379 TGTGATTAGGCACTGTAAACACATTCTCCTCATTAGGATAAATGATATTGATGA-TTTTCTTTTG
** * * * *
266652 CATGAAAATCCTTTCTTTGCCCAATTTTCATTTA
443 CATGGGAATCTTTTCTTTGCCCTATTTTCCTTCA
* * * ** *
266686 AATCAAAGTTCATAGCTTAAGTAAGGCAAGCATCGATTCTTGTAACAATCTCCATTGTTTTCAAG
1 AATCAAAGTTCATACCTTAAATAAGACAAGCATCGATTCTTGTAACTGTCTCCATTCTTTTCAAG
* * *
266751 ACTAGGAAGCCAAAAGCACATTCACTTCATTAGGATACATGACATTGATGCTTTAGTGTCGCGAG
66 ACTAGGAAGCCAAAAGCACATTCCCTTCATTAGGA-ACATGACATTGATGCTTTGGTGTCGCAAG
* * * * * *
266816 AAATGCTTTT-TTTCCCACCATTTTTAATAGAATCAAAGTTTGCCTCTTAAATATGAAAAACTTG
130 AAAAGCTTTTCTTT-TCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGAAAAACATG
* ** ** * * *
266880 AAGACAGACGCTGATGCCCATCCTTTTCAGGATTGGGCACCATAAACATAGTCTTCTCATTAAGA
194 AATACTCATACTAATGCCCATCCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGA
* * *
266945 TACACGATATTGATGCTTTGGTTTTGCAAGAAAAGTATTTTTCCCACCAATTTTTGTAAAGTCTA
259 TACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGTCTA
* * * * *
267010 TGTTCGTGCTTCAAATGAAACAAACAAGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGA
324 AGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGG
* * * *
267075 CACTGTAAACACATTCTCCTCATTACGATAAATGATATTGATGATTTTTTTTTTGCTTGGAAATC
389 CACTGTAAACACATTCTCCTCATTAGGATAAATGATATTGATGA-TTTTCTTTTGCATGGGAATC
* * * *
267140 ATTTATTTGCCTTATTTTCCTTTA
453 TTTTCTTTGCCCTATTTTCCTTCA
*
267164 AATCAAAGTTCATACCTTAAATAAGGCAAGCATCGATTCTTGTAA-TAGTCTCCATTCTTTTCAA
1 AATCAAAGTTCATACCTTAAATAAGACAAGCATCGATTCTTGTAACT-GTCTCCATTCTTTTCAA
* * * *
267228 GACTAGGAAGCCAAAAGCATATTCCCTTCCTTAGG---AGGACATTGAAGCTTTGGTGTCGCAAG
65 GACTAGGAAGCCAAAAGCACATTCCCTTCATTAGGAACATGACATTGATGCTTTGGTGTCGCAAG
* *
267290 AAATGCTTTTCTTTTCACCGTTTTTGATAGAATCAAAGTTTGCCTCTTAAATATGAAAAACATGA
130 AAAAGCTTTTCTTTTCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGAAAAACATG-
* * *
267355 ATAATACTCACACTGATGCCCATCCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCATTAG
194 --AATACTCATACTAATGCCCATCCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAG
* * *
267420 GATACACGACATCGATGCTTTGGTTTCGCAAGAAAGGTAATTTTTCCCACCAATTTTTGTAAAGT
257 GATACACGATATTGATGCTTTGGTTTCGCAAGAAAGG-CATTTTTCCCACCAATTTTTGTAAAGT
** * *
267485 CTTTGTTCGTGCCCCAAATGAAACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATT
321 CTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATT
* ** * * *
267550 GGGCACAATAAACACATTCTCCTCATTAGGATAAATAATATTCATGATTTTTTTTTGCATGGGAA
386 AGGCACTGTAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGGAA
267615 T-TTTTCTTTGCCCTATTTTCCTTCA
451 TCTTTTCTTTGCCCTATTTTCCTTCA
** * * ** *
267640 TTTCAAAGTTCATACCTTATATAA-AGCAAGCATAGATTCTCATAA-TAGTCTCCATTCTTTTTA
1 AATCAAAGTTCATACCTTAAATAAGA-CAAGCATCGATTCTTGTAACT-GTCTCCATTCTTTTCA
* * * * * *
267703 AGACTGGGAAGCTAAAAACACATTCCCTTCCTTAGGAAGCATGACATTGATGCTTTGGGGTCACA
64 AGACTAGGAAGCCAAAAGCACATTCCCTTCATTAGGAA-CATGACATTGATGCTTTGGTGTCGCA
* ** *
267768 AGAAAAGCTTTT-TTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATGCGACAAACA
128 AGAAAAGCTTTTCTTTT-CACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGAAAAACA
* * * * *
267832 CGAATACTCATACTAAT-CCTCACCCTTTTCAGGATTAGGCACCAAAAACATAGTCTTGTAATTA
192 TGAATACTCATACTAATGCC-CATCCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTA
* * * * * * * * **
267896 CGATACGC-ATTTTTCATGCTCTAGTTTTGCAAGAAAGGCATTTTTCCCACCAAATTTCATAAAG
256 GGATACACGA-TATTGATGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAG
* * * * * *
267960 TTTAAGTTCGTGCCTCAAATGAGGCAAACATAGAATCTAGTAATGATTTTCATTCAATTTGTGAT
320 TCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGAT
268025 TA-GCACTGTAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGGA
385 TAGGCACTGTAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGGA
*
268089 ATCTTTTCTTTGCCCTGTTTTCCTTCA
450 ATCTTTTCTTTGCCCTATTTTCCTTCA
** * *
268116 AATCAAAGTTCATACCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCCTTTCTTTTCAAG
1 AATCAAAGTTCATACCTTAAATAAGACAAGCATCGATTCTTGTAACTGTCTCCATTCTTTTCAAG
* * * * * ***
268181 ATTGGGAAGCCCAAAA-CACTTTCCC-TCAATTGGGATAAATGACATTGATGCTTTGGTAAAGCA
66 ACTAGGAAG-CCAAAAGCACATTCCCTTC-ATTAGGA-ACATGACATTGATGCTTTGGTGTCGCA
* * * * * *
268244 AGAAAAGCTTTTCTTTTCACCATTTTTGACAGAATCAAAGCTTGTCTTTTAAATA-CAACAAATA
128 AGAAAAGCTTTTCTTTTCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGAA-AAACA
* * * * * *
268308 TGTAGTGCATACTCATACTAAT-CCCTGTACTTTTCAGGATTAGACACCCTAAACATAGCCTTGT
192 TG-A----ATACTCATACTAATGCCC-ATCCTTTTCAGGATTAGGCACCATAAACATAGTCTTCT
* * * * *
268372 CATTAGGATATATC-ATATTGATACTTTGGTTACGCAAGAAAGGCA-TTTTCCCACTAATTTTAG
251 CATTAGGATACA-CGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTG
* * *
268435 TAAAGTCTAAGTTCATGCCTCAAATGAGATAAACATGGATTCTAGTAATGATCCTCATTCA---T
315 TAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTT
* *
268497 -TGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTTTTTTTTG
380 GTGATTAGGCACTGTAAACACATTCTCCTCATTAGGATAAATGATATTGATGA--TTTTCTTTTG
* * *
268561 CATGGAAATCCTTTCTTTGCCCTATTTTCCTTTA
443 CATGGGAATCTTTTCTTTGCCCTATTTTCCTTCA
* * *
268595 AATCAAAGTTCATAGCTTAAATAAGGCAAGCATCGATTCTTGTAA-TAGTCTCTATTCTTTTCAA
1 AATCAAAGTTCATACCTTAAATAAGACAAGCATCGATTCTTGTAACT-GTCTCCATTCTTTTCAA
* *
268659 GACTAGGAAGCCAAAAGCACATTCGCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCGA
65 GACTAGGAAGCCAAAAGCACATTCCCTTCATTAGGA-ACATGACATTGATGCTTTGGTGTCGCAA
* * * *
268724 GAAATGCTTTT-TTTCCCACCGTTTTTAATAGAATCAAAGTTTGTCTCTTAAATATAAAAAACAT
129 GAAAAGCTTTTCTTT-TCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGAAAAACAT
* ** * * * *
268788 GAATACTGACCCTGATGCCCATCCTTTTCAGGATTGGGCACCATAAACATAGTCTTATCATTAAG
193 GAATACTCATACTAATGCCCATCCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGG
* * * *
268853 ATACACGATATTGATGCTTTGGTTTCGCAAGAAAAGTATTTTTCCCACGAATTTTTGTAAAGTGT
258 ATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGTCT
* * * * *
268918 ATGTTCGTGCTTGAAATGAAACAAACAAGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAG
323 AAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAG
* * * * * * *
268983 ACACTGTAAATACATTCTCTTCGTTAGGATAAATGATATTTATGATTTTCTTTTGCACGAGAATC
388 GCACTGTAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGGAATC
269048 TTTTCTTTGCCCTATTTTCCTTCA
453 TTTTCTTTGCCCTATTTTCCTTCA
* *
269072 AATCAAAGTTCA-AGCCTTAAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAA
1 AATCAAAGTTCATA-CCTTAAATAAGACAAGCATCGATTCTTGTAACTGTCTCCATTCTTTTCAA
* * * * *
269136 GACTGGGAAGCCAAAAACACATTCCCTTCTTTAGGAATCATGACATTGATGCTTTGGGGTCACAA
65 GACTAGGAAGCCAAAAGCACATTCCCTTCATTAGGAA-CATGACATTGATGCTTTGGTGTCGCAA
* * * * *
269201 GAAAAGCTTTTCTTTTCACCATTTTTCATAGAATCAAAGTTTGTCTCTTAAATGTGACAAACTTG
129 GAAAAGCTTTTCTTTTCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGAAAAACATG
* * * * * *
269266 AATACTCATACTAAT-CCTCGA-CTTTTTCAGGATTAGGCAGCATAAACGTAGTGTTTTAATTAG
194 AATACTCATACTAATGCC-C-ATCCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAG
* *
269329 GATACACGATATTGATGCTTTAGTTTCGC----AAGGCATTTTTCCCACCAAATTTCT-TAAAGT
257 GATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACC-AATTTTTGTAAAGT
* *
269389 CTAAGTTCGTGCCTCAAATGAGACAAATATGGATTCCA-TAAATGATCTTCATTCATTTTGTGAT
321 CTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGT-AATGATCTTCATTCATTTTGTGAT
**
269453 TAGGCACTGTAAACACATTCTCCTCATTAACATAAATGATATTGATG
385 TAGGCACTGTAAACACATTCTCCTCATTAGGATAAATGATATTGATG
269500 CTTTAGTGTC
Statistics
Matches: 4046, Mismatches: 575, Indels: 203
0.84 0.12 0.04
Matches are distributed among these distances:
472 10 0.00
473 264 0.07
474 365 0.09
475 175 0.04
476 911 0.23
477 1036 0.26
478 591 0.15
479 242 0.06
480 219 0.05
481 227 0.06
482 6 0.00
ACGTcount: A:0.31, C:0.19, G:0.15, T:0.35
Consensus pattern (476 bp):
AATCAAAGTTCATACCTTAAATAAGACAAGCATCGATTCTTGTAACTGTCTCCATTCTTTTCAAG
ACTAGGAAGCCAAAAGCACATTCCCTTCATTAGGAACATGACATTGATGCTTTGGTGTCGCAAGA
AAAGCTTTTCTTTTCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGAAAAACATGAA
TACTCATACTAATGCCCATCCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATA
CACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGTCTAAG
TTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCA
CTGTAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGGAATCTTT
TCTTTGCCCTATTTTCCTTCA
Found at i:269812 original size:158 final size:156
Alignment explanation
Indices: 269324--269816 Score: 363
Period size: 159 Copynumber: 3.1 Consensus size: 156
269314 TAGTGTTTTA
* * ** * *
269324 ATTAGGATACACGATATTGATGCTTTAGTTTCGCAAG----GCATTTTTCCCACCAAATTTCT-T
1 ATTAGGATAAATGATATTGATGCTTTAGGGTCGAAAGAAAAGCATTTTTCCCACC-AATTTTTGT
* * *
269384 AAAGTCTAAGTTCGTGCCTCAAATGAGACAAA-TATGGATTCCATAAATGATCTTCATTCATTTT
65 AAAGTCTAAGTTC-TGCCTTAAATGAGACAAACT-TGGATTCTAT-AACGATCTTCATTCATTTT
*
269448 GTGATTAGGCACTGTAAACACATTCTCCTC
127 GTGATTAGGCACTATAAACACATTCTCCTC
** * * ** ** *
269478 ATTAACATAAATGATATTGATGCTTTAGTGTCGCAAGAAAAGTTTTTCTTTTCACC-GTTTTTGA
1 ATTAGGATAAATGATATTGATGCTTTAGGGTCGAAAGAAAAGCATTT-TTCCCACCAATTTTTG-
* * * * * * *
269542 TAGAA-T-TAAAGTT-TGTCTCTTAAAT-ACGATAAGCATGTATACTCAT-ACTAATC-CCAGTT
64 TA-AAGTCT-AAGTTCTG-C-CTTAAATGA-GACAAACTTGGATTCT-ATAAC-GATCTTCA-TT
* * * *
269601 -ATTTTCAG-GATTACGCACCATAAACATC-GTCTTCTC
121 CATTTT--GTGATTAGGCACTATAAACA-CATTCTCCTC
* * * * *
269637 ATTAGGACACATCATATTGATGC-TTAGGGTTTGAAAGAAAAGCATTTTTCCCGCCAATTTTTGT
1 ATTAGGATAAATGATATTGATGCTTTAGGG-TCGAAAGAAAAGCATTTTTCCCACCAATTTTTGT
269701 AAAGTCTAAGTTCATGCCTTAAATGAGACAAACTTGGATTCTAGTAACGATCTTCATTCATTTTG
65 AAAGTCTAAGTTC-TGCCTTAAATGAGACAAACTTGGATTCTA-TAACGATCTTCATTCATTTTG
269766 TGATTAGGCACTATAAACACATTCTCCTC
128 TGATTAGGCACTATAAACACATTCTCCTC
*
269795 ATTTGGATAAATGATATTGATG
1 ATTAGGATAAATGATATTGATG
269817 ATTTTCTTTT
Statistics
Matches: 252, Mismatches: 55, Indels: 60
0.69 0.15 0.16
Matches are distributed among these distances:
154 32 0.13
157 11 0.04
158 97 0.38
159 104 0.41
160 8 0.03
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.36
Consensus pattern (156 bp):
ATTAGGATAAATGATATTGATGCTTTAGGGTCGAAAGAAAAGCATTTTTCCCACCAATTTTTGTA
AAGTCTAAGTTCTGCCTTAAATGAGACAAACTTGGATTCTATAACGATCTTCATTCATTTTGTGA
TTAGGCACTATAAACACATTCTCCTC
Found at i:269816 original size:317 final size:313
Alignment explanation
Indices: 269175--269816 Score: 814
Period size: 313 Copynumber: 2.0 Consensus size: 313
269165 TTTAGGAATC
* *
269175 ATGACATTGATGCTTTGGGGTCACAAGAAAAGCTTTTCTTTTCACCATTTTTCATAGAATCAAAG
1 ATGATATTGATGCTTTAGGGTCACAAGAAAAGCTTTTCTTTTCACCATTTTTCATAGAATCAAAG
** * *
269240 TTTGTCTCTTAAATGTGACAAACTTGAATACTCATACTAATCCTCGACTTTTTCAGGATTAGGCA
66 TTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCTCGACTTTTTCAGGATTACGCA
* * * * * *
269305 GCATAAACGTAGTGTTTTAATTAGGATACACGATATTGATGCTTTAGTTTCGCAAGGCATTTTTC
131 CCATAAACATAGTCTTCTAATTAGGACACACGATATTGATGCTTTAGTTTCGAAAGGCATTTTTC
* *
269370 CCACCAAATTTCTTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATATGGATTCCATAAATGAT
196 CCACCAAATTTCTTAAAGTCTAAGTTCATGCCTCAAATGAGACAAATATGGATTCCATAAACGAT
*
269435 CTTCATTCATTTTGTGATTAGGCACTGTAAACACATTCTCCTCATTAACATAA
261 CTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAACATAA
* * * * * *
269488 ATGATATTGATGCTTTAGTGTCGCAAGAAAAGTTTTTCTTTTCACCGTTTTTGATAGAATTAAAG
1 ATGATATTGATGCTTTAGGGTCACAAGAAAAGCTTTTCTTTTCACCATTTTTCATAGAATCAAAG
* * * *
269553 TTTGTCTCTTAAATACGATAAGCATGTATACTCATACTAATCC-C-AGTTATTTTCAGGATTACG
66 TTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCTCGA-CT-TTTTCAGGATTACG
* *
269616 CACCATAAACATCGTCTTCTCATTAGGACACATC-ATATTGATGC-TTAGGGTTT-GAAAGAAAA
129 CACCATAAACATAGTCTTCTAATTAGGACACA-CGATATTGATGCTTTA--GTTTCGAAAG----
* * *
269678 GCATTTTTCCCGCC-AATTTTTGTAAAGTCTAAGTTCATGCCTTAAATGAGACAAACT-TGGATT
187 GCATTTTTCCCACCAAATTTCT-TAAAGTCTAAGTTCATGCCTCAAATGAGACAAA-TATGGATT
* ***
269741 CTAGT-AACGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTTGGATAA
250 CCA-TAAACGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAACATAA
269805 ATGATATTGATG
1 ATGATATTGATG
269817 ATTTTCTTTT
Statistics
Matches: 283, Mismatches: 34, Indels: 20
0.84 0.10 0.06
Matches are distributed among these distances:
311 1 0.00
312 5 0.02
313 146 0.52
314 5 0.02
316 6 0.02
317 118 0.42
318 2 0.01
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.36
Consensus pattern (313 bp):
ATGATATTGATGCTTTAGGGTCACAAGAAAAGCTTTTCTTTTCACCATTTTTCATAGAATCAAAG
TTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCTCGACTTTTTCAGGATTACGCA
CCATAAACATAGTCTTCTAATTAGGACACACGATATTGATGCTTTAGTTTCGAAAGGCATTTTTC
CCACCAAATTTCTTAAAGTCTAAGTTCATGCCTCAAATGAGACAAATATGGATTCCATAAACGAT
CTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAACATAA
Found at i:270774 original size:477 final size:477
Alignment explanation
Indices: 269463--278750 Score: 10864
Period size: 477 Copynumber: 19.7 Consensus size: 477
269453 TAGGCACTGT
** * * * *
269463 AAACACATTCTCC-TCATTAACATAAATGATATTGATGCTTTAGTGTCGCAAGAAAAGTTTTTCT
1 AAACACATTC-CCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCT
* * * * * * *
269527 TTTCACCGTTTTTGATAGAATTAAAGTTTGTCTCTTAAATACGATAAGCATGTATACTCATACTA
65 TTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTA
* * * *
269592 ATCCCAGTTATTTTC-AGGATTACGCACCATAAACATCGTCTTCTCATTAGGACACATC-ATATT
130 ATCCCA-TTCTTTTCAAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACA-CGATATT
* * * *
269655 GATGCTTAGGGTTT-GAAAGAAAAGCATTTTTCCCGCCAATTTTTGTAAAGTCTAAGTTCATGCC
193 GATGCTT-TGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCC
* * * *
269719 TTAAATGAGACAAACTTGGATTCTAGTAACGATCTTCATTCATTTTGTGATTAGGCACTATAAAC
257 TCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTGTAAAC
* * *
269784 ACATTCTCCTCATTTGGATAAATGATATTGATGATTTTCTTTTGCATGCAAATCCTTTCTTTGCC
322 ACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCC
** * * * *
269849 CTATTTTCCTTTACGTCAAAGTTCATGCCATAAATAAGCCAAGCATCGATTCTTGTAACAGACTC
387 CTATTTTCCTTTAAATCAAAGTTCATACCTTAAATAAGACAAGCATCGATTCTTGTAACAGTCTC
269914 CATTCTTTTCAAGACTAGGAAGCCAA
452 CATTCTTTTCAAGACTAGGAAGCCAA
* *
269940 AAACACATTCCCTTTATTAGGATACATCACATTGCA-GCTTTGGTGTCGCAAGAAAAGCTTTTCT
1 AAACACATTCCCTTCATTAGGATACATGACATTG-ATGCTTTGGTGTCGCAAGAAAAGCTTTTCT
* * * * *
270004 TTCCATCGA--TTTGATAGAGTCAAAGTTTGTCTCTTAAAAATGACAAACATTAGTACTCATACT
65 TTCCA-CCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACT
* * * * *
270067 AATCCCCGTTCTTTTC-AGGATTAGACACTATAAACATAGTCTTCTCATTAAGATACATGATATT
129 AAT-CCCATTCTTTTCAAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATT
* * * * **
270131 GATGCTTTGGTCTAGCAAGAAAGGCATTTTTGCCATCAATTTCAGTAAAGTCTAAGTTCATGCCT
193 GATGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCT
* *
270196 CAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGGGATTAGGTACTGTAAACA
258 CAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTGTAAACA
* * * *
270261 CATTCTCCTCACTAGGATAAATGATATTGATGATTTTTTTTTGCTTGGAAATCATTTCTTTGCCC
323 CATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCC
* * *
270326 TATTTTCCTTTCAATCAAAGTTCATACCTTAAATAAGGCAAGCATCGATTCTTGTAATAGTCTCC
388 TATTTTCCTTTAAATCAAAGTTCATACCTTAAATAAGACAAGCATCGATTCTTGTAACAGTCTCC
270391 ATTCTTTTCAAGACTAGGAAGCCAA
453 ATTCTTTTCAAGACTAGGAAGCCAA
* * * * **
270416 AAGCACATTCCCTTCATTAGGATACTTGACATTGATGCTTCGGTGTCGCGAGAAATCCTTTTCTT
1 AAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTT
** * * * * *
270481 TTGACCATTTCTT-ACAGAATCAAAGTTTGTCTCTTAAATATGAAAAACAAGAATACTCACACTG
66 TCCACCATTT-TTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTA
* * * * *
270545 ATGCCCATCCTTTTCTA-GATTAGGCACCATAAACGTACTTTTCTCATTAGGATACACGATATTG
130 AT-CCCATTCTTTTCAAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTG
* * * *
270609 TTGCTTTGGTTTCGCAAGAAAGGTAGTTTTCCCACCAATTTTTGTAGAA-TCTATGTTCATGCCT
194 ATGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTA-AAGTCTAAGTTCATGCCT
* * * *
270673 CAAATGAAACAAACATAGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGAACTGAAAACA
258 CAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTGTAAACA
* * *
270738 CATTCTCCTCATTAAGATAAATGATATTGGTGATTTTCTTTTGCATGGGAATCTTTTCTTTGCCC
323 CATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCC
*
270803 TATTTT-CTTTGAAATCAAAGTTCATACCTTAAATAAGACAAGCATCGATTCTCGTAACAGTCTC
388 TATTTTCCTTT-AAATCAAAGTTCATACCTTAAATAAGACAAGCATCGATTCTTGTAACAGTCTC
* * * *
270867 CATTTTTTTCAGGGCTAGGAAGCCCA
452 CATTCTTTTCAAGACTAGGAAGCCAA
* * * * * *
270893 AAACACTTTCCCTTCATTAGGATAAATGACATTGGTGCTTTAGTGTCACAAGAAAAGCTTTTATT
1 AAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTT
* * * ** * *
270958 TTCACCATTTTTGATAGAATCAAAGTTTGTCTGTTAAATA-CACCAAACCCGTATACTCGTACTA
66 TCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGA-CAAACATGAATACTCATACTA
* * * *
271022 ATCCCCATTCTTTTCAA-GATTAGGCACTATAAACATAGTCTTCTTATTCGAATACATC-ATATT
130 AT-CCCATTCTTTTCAAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACA-CGATATT
* * *
271085 GATGCTTTGGTTAT-GCAAGAAAGGCA-TTTTCCCTCAAATTTTTGTAAAGTCTAAGATCATGCC
193 GATGCTTTGGTT-TCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCC
* * * * * ** *
271148 TCAAATGAAACAAACGTGGATTCTAATAATGATCTTCATTTAATTTGCAATTAGGCATTGTAAAC
257 TCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTGTAAAC
* *
271213 ACATTCTCCTCATTAGGATAAATGATA-T--TGA--TT-ATTTGC-T-----T-TTGTC--TGCC
322 ACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCC
* * * *
271263 CTATTTTCCTTCATATCAAAGTTCATACCTTAAATAAGACAAGCGTTGATTCTTGTAACAGTCTC
387 CTATTTTCCTTTAAATCAAAGTTCATACCTTAAATAAGACAAGCATCGATTCTTGTAACAGTCTC
271328 CATTCTTTTCAAGACTAGGAAGCCAA
452 CATTCTTTTCAAGACTAGGAAGCCAA
* * ** * *
271354 AATCAC-TATCCCTTCATTAGGATA-ATTGACTTTGATGCTTTTATGCCGCAAGAAAAGCTTTTA
1 AAACACAT-TCCCTTCATTAGGATACA-TGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTC
* * * **
271417 TTTTCACCATTTTTGATAGAATCATAGTTTGTCTCTTGAAA-ACGACAAATGTGAATACTCATAC
64 TTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTT-AAATATGACAAACATGAATACTCATAC
* * * *
271481 TAGTCCCTGTTCTTTTC-AGGATTAGGCACCATAACCATAGTCTCCTCATTAGGATACATC-ATG
128 TAATCCC-ATTCTTTTCAAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACA-CGAT-
* *
271544 A-TGATGCTTTGGGTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGTCTAAG-TAATG
190 ATTGATGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCATG
* * * * *
271607 CCTCAAATGAGACAAACCTGGATTCTAGTAATAATGTTCATTCATTTTGTGATTAAGCACTATAA
255 CCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTGTAA
* * * *
271672 ACAGATTCTCCTCATTAGGATAAATGATATT-AAGTATTTTCTTTTGCACGGAAATCCTTTCTTT
320 ACACATTCTCCTCATTAGGATAAATGATATTGATG-ATTTTCTTTTGCATGGAAATCTTTTCTTT
* * *
271736 ACCCTATTTTCCCTTAAATCAAAGTTCAT-CGC----ATAA-ATAAG---C----C----AA-A-
384 GCCCTATTTTCCTTTAAATCAAAGTTCATAC-CTTAAATAAGACAAGCATCGATTCTTGTAACAG
271782 -CTCCATTCTTTTCAAGACTAGGAAGCCAA
448 TCTCCATTCTTTTCAAGACTAGGAAGCCAA
* * *
271811 AAACACATTCCCTTAACTAGGATACATGACATTGATGCTTTGGTGTTGCAAGAAAAGCTTTTCTT
1 AAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTT
* * * *
271876 TCCACCGTTTTTGATAGAGTC-AAGTTTATCTCTTGAATATGACAAACATGAATACTCATACTAA
66 TCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAA
* *
271940 TCCCTGTTCTTTTC-AGGATTAGGCACCATAAA-ATAGTCTACTCATTAGGATACACGATATTGA
131 TCCC-ATTCTTTTCAAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGA
** * * *
272003 TGCTTTGGTTTCATAAGAAAGGCATTTTTTCCACCAATTTTAGTGAAGTCTAAGTTCATGCCTCA
195 TGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCA
* *
272068 AATGAGACAAACATGGATTCTAGTAATGATTTTCATTTATTTTGTGATTAGGCACTGTAAACACA
260 AATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTGTAAACACA
* * ** * * *
272133 TTCTCGTAATTAGGATAAATGATATTGAT--TTTT-TTTTTAACGGAAATCCTTTCTTTGCACTA
325 TTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTA
* * * *
272195 TTTTCC---AAATCAAAGTTCATACCATAAATAAGGCAAGCATTGATTCTTGTAACAATCTCCAT
390 TTTTCCTTTAAATCAAAGTTCATACCTTAAATAAGACAAGCATCGATTCTTGTAACAGTCTCCAT
* *
272257 TTTTTTCAAGATTAGGAAGCCAA
455 TCTTTTCAAGACTAGGAAGCCAA
* * *
272280 AACCACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCGAGAAATA-CTTTTTT
1 AAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAA-AGC-TTTTC
** * * * * *
272344 TTTCCACTGTTGTTGATAGAATCAAAGTTTGTCTCTTAAATATGAAAAACATGAACACTCACACC
64 TTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACT
* * * * * **
272409 GATGCCCATCCTTTT-TAGGATTAGGCACCATAAACATAGCCTTCTCATTAAGATACATAATATT
129 AAT-CCCATTCTTTTCAAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATT
* * ** *
272473 GATGCTTTGGTTTCGCAAGAAAGGTATTTTTCCCACCAATTTTTGTAAAGTCTATGTTTGTACCT
193 GATGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCT
* * * * *
272538 CAAATGAAACAAACGTCGATGCTAAG-AATGATCTTCATTCAATTTGTGATTAGGCACTGTAAAC
258 CAAATGAGACAAACATGGATTCT-AGTAATGATCTTCATTCATTTTGTGATTAGGCACTGTAAAC
* * *
272602 ACATTCTCCTCATTATGATAAATGATATTGATGATTTTCTATTGCATGGGAATCTTTTCTTTGCC
322 ACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCC
* * * * *
272667 CTATTTTCCTTCAAATCAAAATTCATACCTTAAATAAGACAAGCATCAATTCTTGTAATAGTCCC
387 CTATTTTCCTTTAAATCAAAGTTCATACCTTAAATAAGACAAGCATCGATTCTTGTAACAGTCTC
* *
272732 CAATT-TTTTCAGGACTGGGAAGCCAAA
452 C-ATTCTTTTCAAGACTAGGAAGCC-AA
* * * * * *
272759 AAACACATTCCTTTCATTAGGATACAGGACATTGGTGCTTTAGTGTCACAAGAAAAGCTTTTATT
1 AAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTT
* * * * * *
272824 TTCACCATTTTTGATAGAATCAAAGTTTGTCTATTAAATA-CACCAAACCTGTATACTCGTACTA
66 TCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGA-CAAACATGAATACTCATACTA
* * *
272888 ATCCCCATTCTTTTCAA-GATTAGGCACTATAAACATAGTCTTCTTATTCGGATACATC-ATATT
130 AT-CCCATTCTTTTCAAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACA-CGATATT
* * * *
272951 GATGCTTTGGTTAT-GCAAGAAAGGCA-TTTTCCCTCAAATTTTTGAAAAGTCTAAGATCATGCC
193 GATGCTTTGGTT-TCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCC
* * * * * ** *
273014 TCAAATGAAACAAACGTGGATTCTAATAATGATCTTCATTTAATTTGCAATTAGGCATTGTAAAC
257 TCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTGTAAAC
*
273079 ACATTCTCCTCATTAGGATAAATGATATTGATGA------TTTGC-T-----T-TTGTC--TGCC
322 ACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCC
* * * * * **
273129 CTATTTTCCTTCATATCAAAGTTCATACCTTAAATAAGACAAACGTAGATTCTCATAACAGTCTC
387 CTATTTTCCTTTAAATCAAAGTTCATACCTTAAATAAGACAAGCATCGATTCTTGTAACAGTCTC
* * *
273194 CATTCTTTTCAGGACTGGGAAGCCCA
452 CATTCTTTTCAAGACTAGGAAGCCAA
* * * *
273220 AAACACTTTCCCTTCATTAGGATAAATGACGTTGGTGCTTTGGTGTCGCAAGAAAAGCTTTTCTT
1 AAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTT
* * **
273285 TTCACCATTTTTGATAGAATCAAAGTTTGTCTTTTAAATACAACAAACAT-ATATACTCATACTA
66 TCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGA-ATACTCATACTA
* **
273349 ATCCCGTTACTTTTCAA-GATTAGGCACCATAAACATAGTCTTCTTTTTAGGATACATCG-TATT
130 ATCCCATT-CTTTTCAAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACA-CGATATT
* * * * * *
273412 GATGCTTTGGTTACACAAGAAAGGCATTTTTCCCTCAAATTTTTGTAAAGTCTAAGATAATGCCT
193 GATGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCT
* * * ** *
273477 CAAATGTGACAAACATGGATTCTAGTATTGATCTTAATTCATTTCATGATTAGGCACTATAAACA
258 CAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTGTAAACA
* * * *
273542 CATTCTCCTCCTTAGGATAAATGATATTTATGATTTTCTTTTGCATGGGAATCTTTTCTCTGCCC
323 CATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCC
* * * *
273607 TATTTTCCTTCAAATCAAAGTTCATACCTTAAATAAGACAAGCGTTGATTCTCGTAACAGTCTCC
388 TATTTTCCTTTAAATCAAAGTTCATACCTTAAATAAGACAAGCATCGATTCTTGTAACAGTCTCC
273672 ATTCTTTTCAAGACTAGGAAGCCAA
453 ATTCTTTTCAAGACTAGGAAGCCAA
* * **
273697 AATCAC-TATCCCTTCATTAGGATA-ATTGACTTTGATGCTTTTATG-CTGCAAGAAAAGCTTTT
1 AAACACAT-TCCCTTCATTAGGATACA-TGACATTGATGCTTTGGTGTC-GCAAGAAAAGCTTTT
* * * * * **
273759 ATTTTCACCATTTTTGATAGAATCATAGTTTGTCTCTTGAGA-ACGACAAATGTGAATACTCATA
63 CTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTT-AAATATGACAAACATGAATACTCATA
* * * * * *
273823 CTAGTCCCTGTTCTTTT-AAGGACTAGGCACCATAACCATAGTCTCCTCATGAGGATACATC-AT
127 CTAATCCC-ATTCTTTTCAAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACA-CGAT
* *
273886 GA-TGATGCTTTGGGTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGTCTAAG-TAAT
190 -ATTGATGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCAT
* * * * *
273949 GCCTCAAATGAGACAAACTTGGATTCTAGTAATAATGTTCATTCATTTTGTGATTAAGCACTATA
254 GCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTGTA
* * * *
274014 AACAGATTCTCCTCATTAGGATAAATGATATT-AAGTATTTTCTTTTGCACGGAAATCCTTTCTT
319 AACACATTCTCCTCATTAGGATAAATGATATTGATG-ATTTTCTTTTGCATGGAAATCTTTTCTT
* * * *
274078 TACCCTATTTTCCCTGAAATCAAAGTTCAT-CGC----ATAA-ATAAG---C----C----AA-A
383 TGCCCTATTTTCCTTTAAATCAAAGTTCATAC-CTTAAATAAGACAAGCATCGATTCTTGTAACA
274125 --CTCCATTCTTTTCAAGACTAGGAAGCCAA
447 GTCTCCATTCTTTTCAAGACTAGGAAGCCAA
* * * *
274154 AAACACATTCCCTTAACTAGGATACATGACATTGATGCTTTGGTGTTGCAAGAAAAGCTTCTCTT
1 AAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTT
* * *
274219 TCCACCATTTTTGATAGAGTC-AAGTTTATCTCTTGAATATGACAAACATGAATACTCATACTAA
66 TCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAA
* *
274283 TCCCTGTTCTTTTC-AGGATTAGGCACCATAAA-ATAGTCTACTCATTAGGATACACGATATTGA
131 TCCC-ATTCTTTTCAAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGA
* * * *
274346 TGCTTTGGTTTCGTAAGAAAGGCATTTTTTCCACCAATTTTAGTGAAGTCTAAGTTCATGCCTCA
195 TGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCA
* *
274411 AATGAGACAAACATGGATTCTAGTAATGATTTTCATTTATTTTGTGATTAGGCACTGTAAACACA
260 AATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTGTAAACACA
* * * * *
274476 TTCTCGTAATTAGGATAAATGATATTGAT--TTTT-TTTTGAATGGAAATCCTTTCTTTGCACTA
325 TTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTA
* * * *
274538 TTTTCC---AAATCAAAGTTCATACCATAAATAAGGCAAGCATTGATTCTTGTAACAATCTCCAT
390 TTTTCCTTTAAATCAAAGTTCATACCTTAAATAAGACAAGCATCGATTCTTGTAACAGTCTCCAT
* *
274600 TTTTTTCAAGATTAGGAAGCCAA
455 TCTTTTCAAGACTAGGAAGCCAA
* * * * *
274623 AAGCACATTCCCTTCATTAGGATATATGACATTGATGCTTTGGTGTCGCGAGCAATA-CTTTTTT
1 AAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAG-AAAAGC-TTTTC
** * * * * *
274687 TTTCCACTGTTGTTGATAGAATCAAAGTTTGTCTCTTAAATATGAAAAACATGAACACTCACACC
64 TTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACT
* * * * * **
274752 GATGCCCATCCTTTT-TAGGATTAGGCACCATAAACATAGCCTTCTCATTAAGATACATAATATT
129 AAT-CCCATTCTTTTCAAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATT
* * ** *
274816 GATGCTTTGGTTTCGCAAGAAAGGTATTTTTCCCACCAATTTTTGTAAAGTCTATGTTTGTACCT
193 GATGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCT
* * * * *
274881 CAAATGAAACAAACGTCGATGCTAAG-AATGATCTTCATTCAATTTGTGATTAGGCACTGTAAAC
258 CAAATGAGACAAACATGGATTCT-AGTAATGATCTTCATTCATTTTGTGATTAGGCACTGTAAAC
* * *
274945 ACATTCTCCTCATTATGATAAATGATATTGATGATTTTCTATTGCATGGGAATCTTTTCTTTGCC
322 ACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCC
* * *
275010 CTATTTTCCTTCAAATCAAAATTCATACCTTAAATAAGACAAGCATCGATTCTTGTAATAGTCTC
387 CTATTTTCCTTTAAATCAAAGTTCATACCTTAAATAAGACAAGCATCGATTCTTGTAACAGTCTC
* *
275075 CAATT-TTTTCAGGACTGGGAAGCCAAA
452 C-ATTCTTTTCAAGACTAGGAAGCC-AA
* * *
275102 AAACACATTCCTTTCATTAGGATACAGGACATTGAAGCTTTGGTGTCGCAAGAAAAGCTTTTCTT
1 AAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTT
* * * *
275167 TCCACCATTTTTGATAGAGTCAAAGTTTGTCTCTTAAATATGACAAACATTAATACTTATAATAA
66 TCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAA
* * * *
275232 TCCCCGTTCTTTT-TAGGATTAGGCACCATAAACATAGTTTTCTCATTAGGGTACATC-ATATTG
131 T-CCCATTCTTTTCAAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACA-CGATATTG
* * * * * * *
275295 ATGCTTTGGTTAT-GTAGGACATGCACTTTTCCCCCCAATTTTTGTAAAGTCTAAGTTCTTGCCT
194 ATGCTTTGGTT-TCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCT
* **
275359 CAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGAGTAGGCACTACAAACA
258 CAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTGTAAACA
* *
275424 CATTCTCCTCATTAGGATAAATGATACT-A-GTATTTTCTTTTGCATGGAAATCCTTTCTTTGCC
323 CATTCTCCTCATTAGGATAAATGATATTGATG-ATTTTCTTTTGCATGGAAATCTTTTCTTTGCC
* * * * *
275487 TTACTTTCCTTTAAATCAAAGTTCATATCTTAAATAA-AGCAAGCATTGATTCTTGTAACAATCT
387 CTATTTTCCTTTAAATCAAAGTTCATACCTTAAATAAGA-CAAGCATCGATTCTTGTAACAGTCT
* * *
275551 CCATTCTTTTCAGGACTGGGAGGCCAA
451 CCATTCTTTTCAAGACTAGGAAGCCAA
** * * *
275578 AAACACATTCTTTTCATTAGGATACAGGACATTGAAT-CTTTGGTATTGCAAGAAAAGCTTTTCT
1 AAACACATTCCCTTCATTAGGATACATGACATTG-ATGCTTTGGTGTCGCAAGAAAAGCTTTTCT
** * * *
275642 TTCCACTGTTTTTTATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATTAATACTCATACTA
65 TTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTA
*
275707 ATCCCCATTCTTTTC-AGGATTAGGCACCATAAACATAG-CTTTCTCATTAGGATACGCGATATT
130 AT-CCCATTCTTTTCAAGGATTAGGCACCATAAACATAGTC-TTCTCATTAGGATACACGATATT
* * * ** * *
275770 GATGCTTTGGTTTCTCAAGATAGGCATTTTTCCTATGAATTTTAGTAAATTCTAAGTTCATGCCT
193 GATGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCT
* * * *
275835 TAAATGAGACAAACATGGAATCTAGTAATGATCTTCTTTCATTTTGTGATTAGGCACTATAAACA
258 CAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTGTAAACA
* * *
275900 CATTCTCCTCATTAGGATAAATGATATTGATGATTTT-TTTGGCATTGAAATCCTTTCTTTGCCC
323 CATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCC
* * * * *
275964 TATTTTCCTATAAATCAAAGTTCATACCTTAAATATGGCCAGCATCGATTCTTGTAATAGTCTCC
388 TATTTTCCTTTAAATCAAAGTTCATACCTTAAATAAGACAAGCATCGATTCTTGTAACAGTCTCC
*
276029 ATTATTTTCAAGACTAGGAAGCCAA
453 ATTCTTTTCAAGACTAGGAAGCCAA
** * * *
276054 AAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTAACGAGAAATGCCTTTCTT
1 AAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTT
* * * ** * *
276119 TCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGAAAAACATAAACGCTCACACTGA
66 TCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAA
* * * *
276184 TGCCCATCCTTTT-TAGGATTAGGCACCATAAACATAGTCTTCTCATTAAGATACACAATATTGA
131 T-CCCATTCTTTTCAAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGA
* * * * ** * *
276248 TGCTTTGGTTACGCAACAAAGACATTTTTCCCACCAAGTTTTGTAAAGTCTCTGGTT-GTGCCTT
195 TGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGTCT-AAGTTCATGCCTC
* * * * * *
276312 ATATGAAACAAACATGGATTCTAATAATGATCTTCATTCAATTTGTGATTAGGCATTGTAAACAG
259 AAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTGTAAACAC
* **
276377 ATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGGAATCTTTTCTTCACCCT
324 ATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCT
* * *
276442 ATTTTCCTTCAAATCAAAGTTCATACCTTAAATAAGACAAGCATCTATTCTCGTAACAGTCTCCA
389 ATTTTCCTTTAAATCAAAGTTCATACCTTAAATAAGACAAGCATCGATTCTTGTAACAGTCTCCA
* *
276507 TTCTTTTCAAGACTGGGAAGCCCA
454 TTCTTTTCAAGACTAGGAAGCCAA
* * * *
276531 AAACACTTTCCCTTCATTGGGATAAATGACATTGATGCTTTGGTGTCACAAGAAAAGCTTTTCTT
1 AAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTT
* * * *
276596 TTCACCATTTTCGATTGAATCAAAGTTTGCCTCTTAAATATGACAAACATGAATACTCATACTAA
66 TCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAA
* * * *
276661 T-CCTTATCTTTTTCAA-GATTAAGCACCATAAATATAGTCTTCTCTTTAGGATACACGATATTG
131 TCCCAT-TC-TTTTCAAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTG
* * * * * * * *
276724 ATGGCTTTAGTTTTGCAAGAATGGCCTTTTTCTCACCAATTTTTGTAATGTCCAAGTTCGTGCCT
194 AT-GCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCT
* * * * *
276789 CGAATGAGACAAACACGGATTCTAGTAATGATCTTCGTTCTTTTTGTCATTAGGCACTGTAAACA
258 CAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTGTAAACA
* * * *
276854 CATTCTCCTCATTATGATAAATGATATTGATGATCTTT-TTTTGTATGGGAATTTTTTCTTTGCC
323 CATTCTCCTCATTAGGATAAATGATATTGATGAT-TTTCTTTTGCATGGAAATCTTTTCTTTGCC
* * * *
276918 CTATTTTCCTTTAAATCATAGTTCATACCTTAAATAAGACAAGCATCGATTCTCGAAATAGTCTC
387 CTATTTTCCTTTAAATCAAAGTTCATACCTTAAATAAGACAAGCATCGATTCTTGTAACAGTCTC
* *
276983 CATTCTTTTCAAGATTGGGAAGCCAA
452 CATTCTTTTCAAGACTAGGAAGCCAA
* * * *
277009 AAACACATTCCCTTTATTAGGAAACCTGACATTGATGCTTTGGTGTCACAAGAAAAGCTTTTCTT
1 AAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTT
** * * *
277074 TCCACTGTTTTTGATAGAATC-AATTTTGCCTCTTAAATACGACAAACATGAATACTCATACTAA
66 TCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAA
* * * *
277138 TCCTCGTCCTTTTCAA-GATTAAGCACCATAAACATAGTCTTCTCTTTAGGATACACGATATTGA
131 TCC-CATTCTTTTCAAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGA
* * * * * * * * * *
277202 CGGCTTTGGTTTCGTAAGAATGGCCTTTTTCTCACCAATTTTTGTAATGTCCAAGTTCGTTCTTC
195 -TGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTC
* * *
277267 AAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCTTTTTGTCATTAGGCATTGTAAACAC
259 AAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTGTAAACAC
* *
277332 ATTCTCCTCATTAGGATAAATGATATTGATGATCTTT-TTTTGTAT-GAGAATTTTTTCTTTGCC
324 ATTCTCCTCATTAGGATAAATGATATTGATGAT-TTTCTTTTGCATGGA-AATCTTTTCTTTGCC
* *
277395 CTATTTTCCTTTAAATCAAAGTTCATACCTTAAATAAGACAAGCATCGATTCTCGAAACAGTCTC
387 CTATTTTCCTTTAAATCAAAGTTCATACCTTAAATAAGACAAGCATCGATTCTTGTAACAGTCTC
*
277460 CATTCTTTTCAAGACTGGGAAGCCAA
452 CATTCTTTTCAAGACTAGGAAGCCAA
* * * * * *
277486 AAACACATTCCCTTTATTAGGAAACCTGACATTGAAGCTTTGGTATCACAAGAAAAGCTTTTCTT
1 AAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTT
* * *
277551 TCCACCATTTTTGATTA-AATCAAAGTTTGTTTCTTGAAA-ATGACGAACATGAATACTTATACT
66 TCCACCATTTTTGA-TAGAATCAAAGTTTGTCTCTT-AAATATGACAAACATGAATACTCATACT
* * * * ***
277614 AATCCTTATCCTTTTCAA-GATTATGCCCCATAAACATAGTCTTCTCATTAGGATAGTTGATATT
129 AATCC-CATTCTTTTCAAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATT
* * * *
277678 GATGCTTTGGTTTCGCAAGAAAGGCATTTTTCTCACCAATTTTTATAAAGTCCAAGTTCGTGCCT
193 GATGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCT
* * * *
277743 CGAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCTTTTTGTCATTAGGCACTGTAAACG
258 CAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTGTAAACA
* ** * *
277808 CATTCTCCTCATTACGATAAATGATATTGATGAACTTCTTTTGCAT-AAGAAT-TTTTTTTTGCC
323 CATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGA-AATCTTTTCTTTGCC
*
277871 CTATTTTCCTTTAAATCAAAGTTCATACCTTAAATAAGACAAGCATCGATTCTTGAAACAGTCTC
387 CTATTTTCCTTTAAATCAAAGTTCATACCTTAAATAAGACAAGCATCGATTCTTGTAACAGTCTC
* *
277936 AATTCTTTTCAAGACTAGGTAGCCAA
452 CATTCTTTTCAAGACTAGGAAGCCAA
* * * * *
277962 AAACACATTTCCTTCATTAGGAAATATGACATTGATGCTTTGATGTCACAAGAAAAGCTTTT-TT
1 AAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTT
** *
278026 TCCCACCATTTTTGATAGAATCAAAGTTTAACTCTTAAATATGATAAACATGAATACTCATACTA
66 T-CCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTA
*** * *
278091 ATCCTCGCGCTTTTCAA-GATTA---AGCATAAACATAGTCTTCTCA-T----TACACGATATTT
130 ATCC-CATTCTTTTCAAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTG
* * * ** *
278147 ATGCTTTGGTTTCACAAGAAAGGCATTTTTCTCACCAATTTTTGTAAAGTCCAAGTTTGTGCCTT
194 ATGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTC
* * * *
278212 GAATGAGACAAACATGGATTCTGGTAATGATCTTCATTCTTTTTGTCATTAGGCACTGT-AACAC
259 AAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTGTAAACAC
* ** *
278276 ATTCTCCTCATTAAGATAAATGATATTGATGATCATCTTTTGCATAGG-AATTTTTTCTTTGCCC
324 ATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCAT-GGAAATCTTTTCTTTGCCC
* * * * *
278340 TATTTTCCTTTAAATCAAAGTTCATACCTTAAATAAGACGAGCATCAATTCTCGAAATAGTCTCC
388 TATTTTCCTTTAAATCAAAGTTCATACCTTAAATAAGACAAGCATCGATTCTTGTAACAGTCTCC
* *
278405 ATTCTTTTCAAAACTAGGAAGCCAC
453 ATTCTTTTCAAGACTAGGAAGCCAA
* * *
278430 AAACACATTCCCTTCATTAGGAAATATGACATTGATGCTTTGGTGTCACAAGAAAAGCTTTTCTT
1 AAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTT
* * *
278495 TCCACCGTTTTTGATAAAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAA
66 TCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAA
* * *
278560 TCCTCA-TCTTTTTAAAGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTAA
131 TCC-CATTCTTTTCAAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGA
** ** * * * * *
278624 TTTTTTTATTTCACAAGAAAGGCA-TTTTCCCACCAAATTTCGTAAAGTCTAAGTCCGTGCCTCA
195 TGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCA
* * *
278688 AATGAGGCAAACATGGATTTTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACA
260 AATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTGTAAACA
278751 GATCTTTTCT
Statistics
Matches: 7614, Mismatches: 977, Indels: 441
0.84 0.11 0.05
Matches are distributed among these distances:
450 30 0.00
451 2 0.00
453 62 0.01
454 20 0.00
455 157 0.02
456 308 0.04
457 200 0.03
458 4 0.00
459 2 0.00
460 16 0.00
461 533 0.07
462 236 0.03
463 5 0.00
464 8 0.00
465 1 0.00
466 6 0.00
467 63 0.01
468 353 0.05
469 157 0.02
470 56 0.01
471 156 0.02
472 341 0.04
473 27 0.00
474 12 0.00
475 175 0.02
476 1676 0.22
477 1966 0.26
478 925 0.12
479 117 0.02
ACGTcount: A:0.31, C:0.19, G:0.14, T:0.36
Consensus pattern (477 bp):
AAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTT
TCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAA
TCCCATTCTTTTCAAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGAT
GCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCAA
ATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTGTAAACACAT
TCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTAT
TTTCCTTTAAATCAAAGTTCATACCTTAAATAAGACAAGCATCGATTCTTGTAACAGTCTCCATT
CTTTTCAAGACTAGGAAGCCAA
Found at i:277435 original size:159 final size:154
Alignment explanation
Indices: 276319--278002 Score: 423
Period size: 159 Copynumber: 10.6 Consensus size: 154
276309 CTTATATGAA
* * *** *** *
276319 ACAAACATGGATTCTAATAATGATCTTCATTCAATTT-GTGATTAGGCATTGTAAACAGATTCTC
1 ACAAACATGGATTCTAGTAATGATCTTCATTC-TTTTCAACATTAGGCACCATAAACACATTCTC
* * * *
276383 CTCATTAGGATAAATGATATTGATGAT-TTTCTTTTGCATGGGAATCTTTTCTTCACCCTATTTT
65 CTCATTAGGATAAATGATATTGATG-TCTTT-TTTTGTATGAGAATTTTTTCTT-TCCCTATTTT
*
276447 CCTTCAAATCAAAGTTCATACCTTAAATAAG
127 --TTTAAATCAAAGTTCAT-CCTTAAATAAG
* ** * * * * * * * *
276478 ACAAGCATCTATTCTCGTAA-CAGTCTCCATTCTTTTCAAGACTGGGAAGCCCA-AAACACTTTC
1 ACAAACATGGATTCTAGTAATGA-TCTTCATTCTTTTCAACATTAGGCA--CCATAAACACATTC
* * ** * * **
276541 -CCTTCATTGGGATAAATGACATTGATG-C-TTTGGTGTCACAAGAAAAGCTTTTCTTTTCACC-
63 TCC-TCATTAGGATAAATGATATTGATGTCTTTTTTTGT---ATGAGAATTTTTTC-TTTC-CCT
* * * *
276602 ATTTTCGATTGAATCAAAGTTTGCCT-CTTAAATATG
122 ATTTT--TTTAAATCAAAG-TT-CATCCTTAAATAAG
* * * * * * * * *
276638 ACAAACATGAATACTCA-TACTAATCCTT-A-TCTTTTTCAAGATTAAGCACCATAAATATAGTC
1 ACAAACATGGATTCT-AGTAATGAT-CTTCATTC-TTTTCAACATTAGGCACCATAAACACATTC
* * * * * *
276700 TTCTCTTTAGGATACACGATATTGATGGCTTTAGTTTTGCA--AGAATGGCCTTTTTC--TCACC
63 TCCTCATTAGGATAAATGATATTGATGTCTTT--TTTTGTATGAGAAT----TTTTTCTTTC-CC
* * * * * ** *
276761 AATTTTTGTAATGTCCAAGTTCGTGCCTCGAATGAG
121 TATTTTTTTAA-ATCAAAGTTCAT-CCTTAAATAAG
* * *** **
276797 ACAAACACGGATTCTAGTAATGATCTTCGTTCTTTTTGTCATTAGGCACTGTAAACACATTCTCC
1 ACAAACATGGATTCTAGTAATGATCTTCATTCTTTTCAACATTAGGCACCATAAACACATTCTCC
* *
276862 TCATTATGATAAATGATATTGATGATCTTTTTTTGTATGGGAATTTTTTCTTTGCCCTATTTTCC
66 TCATTAGGATAAATGATATTGATG-TCTTTTTTTGTATGAGAATTTTTTCTTT-CCCTATTTT--
*
276927 TTTAAATCATAGTTCATACCTTAAATAAG
127 TTTAAATCAAAGTTCAT-CCTTAAATAAG
* * * * * * * * *
276956 ACAAGCATCGATTCTCGAAAT-AGTCTCCATTCTTTTCAAGATTGGGAAGCCAAAAACACATTC-
1 ACAAACATGGATTCTAGTAATGA-TCTTCATTCTTTTCAACATTAGGCA-CCATAAACACATTCT
* * * ** * * ** *
277019 CCTTTATTAGGA-AACCTGACATTGATG-C-TTTGGTGTCACAAGAAAAGCTTTTCTTTCCACTG
64 CC-TCATTAGGATAA-ATGATATTGATGTCTTTTTTTGT---ATGAGAATTTTTTCTTTCC-CTA
* ** * *
277081 TTTTTGATAGAATCAATTTTGCCT-CTTAAATACG
123 TTTTT-TTA-AATCAAAGTT-CATCCTTAAATAAG
* * * * * * * * * * * *
277115 ACAAACATGAATACTCA-TACTAATCCTCGTCCTTTTCAAGATTAAGCACCATAAACATAGTCTT
1 ACAAACATGGATTCT-AGTAATGATCTTCATTCTTTTCAACATTAGGCACCATAAACACATTCTC
* * * * * * *
277179 CTCTTTAGGATACACGATATTGACGGCTTTGGTTTCGTA--AGAATGGCCTTTTTC--TCACCAA
65 CTCATTAGGATAAATGATATTGATGTCTTT--TTTTGTATGAGAAT----TTTTTCTTTC-CCTA
* * * * * *
277240 TTTTTGTAATGTCCAAGTTCGTTCTTCAAATGAG
123 TTTTTTTAA-ATCAAAGTTCATCCTT-AAATAAG
*** ***
277274 ACAAACATGGATTCTAGTAATGATCTTCATTCTTTTTGTCATTAGGCATTGTAAACACATTCTCC
1 ACAAACATGGATTCTAGTAATGATCTTCATTCTTTTCAACATTAGGCACCATAAACACATTCTCC
277339 TCATTAGGATAAATGATATTGATGATCTTTTTTTGTATGAGAATTTTTTCTTTGCCCTATTTTCC
66 TCATTAGGATAAATGATATTGATG-TCTTTTTTTGTATGAGAATTTTTTCTTT-CCCTATTTT--
277404 TTTAAATCAAAGTTCATACCTTAAATAAG
127 TTTAAATCAAAGTTCAT-CCTTAAATAAG
* * * ** * * * * * *
277433 ACAAGCATCGATTCTCG-AAACAGTCTCCATTCTTTTCAAGACTGGGAAGCCAAAAACACATTC-
1 ACAAACATGGATTCTAGTAATGA-TCTTCATTCTTTTCAACATTAGGCA-CCATAAACACATTCT
* * * * * *** * * ** *
277496 CCTTTATTAGGA-AACCTGACATTGAAG-CTTTGGTATCACAAGAAAAGCTTTTCTTTCCACCAT
64 CC-TCATTAGGATAA-ATGATATTGATGTCTTT--TTTTGTATGAGAATTTTTTCTTTCC-CTAT
** * *
277559 TTTTGATTAAATCAAAGTTTGTTTCTTGAAA-ATG
124 TTTT--TTAAATCAAAG-TTCATCCTT-AAATAAG
* * * * * * * * * * *
277593 ACGAACATGAATACTTA-TACTAATCCTT-ATCCTTTTCAAGATTATGCCCCATAAACATAGTCT
1 ACAAACATGGATTC-TAGTAATGAT-CTTCATTCTTTTCAACATTAGGCACCATAAACACATTCT
* ** * * * * *
277656 TCTCATTAGGATAGTTGATATTGATG-CTTTGGTTTCGCAAGA-AAGGCATTTTTC--TCACCAA
64 CCTCATTAGGATAAATGATATTGATGTCTTT--TTTTGTATGAGAA---TTTTTTCTTTC-CCTA
* * * ** *
277717 TTTTTATAAAGTCCAAGTTCGTGCCTCGAATGAG
123 TTTTTTTAAA-TCAAAGTTCAT-CCTTAAATAAG
*** ** *
277751 ACAAACATGGATTCTAGTAATGATCTTCATTCTTTTTGTCATTAGGCACTGTAAACGCATTCTCC
1 ACAAACATGGATTCTAGTAATGATCTTCATTCTTTTCAACATTAGGCACCATAAACACATTCTCC
* * * * *
277816 TCATTACGATAAATGATATTGATGAACTTCTTTTGCATAAGAATTTTTT-TTTGCCCTATTTTCC
66 TCATTAGGATAAATGATATTGATG-TCTTTTTTTGTATGAGAATTTTTTCTTT-CCCTATTTT--
277880 TTTAAATCAAAGTTCATACCTTAAATAAG
127 TTTAAATCAAAGTTCAT-CCTTAAATAAG
* * * ** * * * *
277909 ACAAGCATCGATTCTTG-AAACAGTC-TCAATTCTTTTCAAGACTAGGTAGCCAAAAACACATT-
1 ACAAACATGGATTCTAGTAATGA-TCTTC-ATTCTTTTCAACATTAGGCA-CCATAAACACATTC
*
277971 TCCTTCATTAGGA-AATATGACATTGATG-CTTT
63 TCC-TCATTAGGATAA-ATGATATTGATGTCTTT
278003 GATGTCACAA
Statistics
Matches: 1071, Mismatches: 337, Indels: 236
0.65 0.20 0.14
Matches are distributed among these distances:
156 17 0.02
157 47 0.04
158 227 0.21
159 452 0.42
160 281 0.26
161 34 0.03
162 10 0.01
163 3 0.00
ACGTcount: A:0.30, C:0.19, G:0.14, T:0.37
Consensus pattern (154 bp):
ACAAACATGGATTCTAGTAATGATCTTCATTCTTTTCAACATTAGGCACCATAAACACATTCTCC
TCATTAGGATAAATGATATTGATGTCTTTTTTTGTATGAGAATTTTTTCTTTCCCTATTTTTTTA
AATCAAAGTTCATCCTTAAATAAG
Found at i:278025 original size:158 final size:156
Alignment explanation
Indices: 277389--278025 Score: 343
Period size: 158 Copynumber: 4.0 Consensus size: 156
277379 GAATTTTTTC
*
277389 TTTGCCCTATTTTCCTTTAAATCAAAGTTCATACCTTAAATAAGACAAGCATCGATTCTCGAAAC
1 TTTGCCCTATTTTCCTTTAAATCAAAGTTCATACCTTAAATAAGACAAGCATCGATTCTTGAAAC
* * * **
277454 AGTCTCCATTCTTTTCAAGACTGGGAAGCCAAAAACACATTCCCTTTATTAGGA-AACCTGACAT
66 AGTCT-CATTCTTTTCAAGACTAGG-AGCCAAAAACACATTTCC-TCATTAGGATAATATGACAT
* *
277518 TGAAGCTTTGGTATCACAAGAAAAGCTTT
128 TGATGCTTTGGTGTCACAAGAAAAGCTTT
* * *** ** ** * *
277547 TCTTTCCACCATTTTTGATTAAATCAAAGTTTGTTTCTTGAAA-ATGACGAA-CAT-GAATACTT
1 T-TTGCC-CTATTTTCCTTTAAATCAAAGTTCATACCTT-AAATAAGAC-AAGCATCG-ATTCTT
* * * * * * ** * * *
277609 -ATACTAATCCTTATCCTTTTCAAGATTATGCCCCATAAACATAGTCTT-CTCATTAGGATAGT-
61 GAAAC-AGT-CTCATTCTTTTCAAGACTAGGAGCCAAAAACACA-T-TTCCTCATTAGGATAATA
* * * *
277671 TGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTT
122 TGACATTGATGCTTTGGTGTCACAAGAAAAGC-TTT
* * * * * ** * * * * *
277707 TTCT-CACCAATTTT--TATAAAGTCCAAGTTCGTGCCTCGAATGAGACAAACATGGATTCTAGT
1 TT-TGC-CCTATTTTCCTTTAAA-TCAAAGTTCATACCTTAAATAAGACAAGCATCGATTCTTGA
* **** * *** * *
277769 AA-TGATCTTCATTCTTTTTGTCATTAGGCA-CTGTAAACGCATTCTCCTCATTACGATAA-ATG
63 AACAG-TC-TCATTCTTTTCAAGACTAGG-AGCCAAAAACACATT-TCCTCATTAGGATAATATG
* ** * ***
277831 ATATTGATGAACTTCTTTTG-CATAAG-AATTTTTT
124 ACATTGATG--CTT-TGGTGTCACAAGAAAAGCTTT
277865 TTTGCCCTATTTTCCTTTAAATCAAAGTTCATACCTTAAATAAGACAAGCATCGATTCTTGAAAC
1 TTTGCCCTATTTTCCTTTAAATCAAAGTTCATACCTTAAATAAGACAAGCATCGATTCTTGAAAC
277930 AGTCTCAATTCTTTTCAAGACTAGGTAGCCAAAAACACATTTCCTTCATTAGGA-AATATGACAT
66 AGTCTC-ATTCTTTTCAAGACTAGG-AGCCAAAAACACATTTCC-TCATTAGGATAATATGACAT
*
277994 TGATGCTTTGATGTCACAAGAAAAGCTTT
128 TGATGCTTTGGTGTCACAAGAAAAGCTTT
278023 TTT
1 TTT
278026 TCCCACCATT
Statistics
Matches: 340, Mismatches: 102, Indels: 74
0.66 0.20 0.14
Matches are distributed among these distances:
156 4 0.01
157 29 0.09
158 133 0.39
159 98 0.29
160 66 0.19
161 10 0.03
ACGTcount: A:0.32, C:0.19, G:0.13, T:0.36
Consensus pattern (156 bp):
TTTGCCCTATTTTCCTTTAAATCAAAGTTCATACCTTAAATAAGACAAGCATCGATTCTTGAAAC
AGTCTCATTCTTTTCAAGACTAGGAGCCAAAAACACATTTCCTCATTAGGATAATATGACATTGA
TGCTTTGGTGTCACAAGAAAAGCTTT
Found at i:287842 original size:13 final size:13
Alignment explanation
Indices: 287824--287849 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
287814 TACACCAAGT
287824 ATGTATCGATACA
1 ATGTATCGATACA
287837 ATGTATCGATACA
1 ATGTATCGATACA
287850 CAAAAAATTG
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.38, C:0.15, G:0.15, T:0.31
Consensus pattern (13 bp):
ATGTATCGATACA
Found at i:287847 original size:32 final size:33
Alignment explanation
Indices: 287806--287869 Score: 94
Period size: 32 Copynumber: 2.0 Consensus size: 33
287796 TAGCCAAACT
* **
287806 TGTATCGATACACCAAGTA-TGTATCGATACAA
1 TGTATCGATACACAAAAAATTGTATCGATACAA
287838 TGTATCGATACACAAAAAATTGTATCGATACA
1 TGTATCGATACACAAAAAATTGTATCGATACA
287870 TTGGCTTGTA
Statistics
Matches: 28, Mismatches: 3, Indels: 1
0.88 0.09 0.03
Matches are distributed among these distances:
32 16 0.57
33 12 0.43
ACGTcount: A:0.41, C:0.17, G:0.14, T:0.28
Consensus pattern (33 bp):
TGTATCGATACACAAAAAATTGTATCGATACAA
Found at i:293478 original size:13 final size:13
Alignment explanation
Indices: 293460--293498 Score: 69
Period size: 13 Copynumber: 3.0 Consensus size: 13
293450 ACATTTTTCT
293460 TTGTATCGATACA
1 TTGTATCGATACA
293473 TTGTATCGATACA
1 TTGTATCGATACA
*
293486 CTGTATCGATACA
1 TTGTATCGATACA
293499 GGGGGATTAT
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
13 25 1.00
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.36
Consensus pattern (13 bp):
TTGTATCGATACA
Found at i:293662 original size:20 final size:19
Alignment explanation
Indices: 293621--293663 Score: 52
Period size: 20 Copynumber: 2.2 Consensus size: 19
293611 ATCTTTTACA
293621 AAATACTTGTTTTTCACTTC
1 AAATACTTGTTTTTCAC-TC
293641 AAATCACTTCGTTTTTCA-TC
1 AAAT-ACTT-GTTTTTCACTC
293661 AAA
1 AAA
293664 ACCAGCATCA
Statistics
Matches: 21, Mismatches: 0, Indels: 4
0.84 0.00 0.16
Matches are distributed among these distances:
20 9 0.43
21 4 0.19
22 8 0.38
ACGTcount: A:0.30, C:0.21, G:0.05, T:0.44
Consensus pattern (19 bp):
AAATACTTGTTTTTCACTC
Found at i:295977 original size:20 final size:21
Alignment explanation
Indices: 295954--296010 Score: 71
Period size: 21 Copynumber: 2.8 Consensus size: 21
295944 ACAATTCAAA
**
295954 GTATCGATACATGTTGCA-AT
1 GTATCGATACATGTTAAAGAT
**
295974 GTATCGATACATGAAAAAGAT
1 GTATCGATACATGTTAAAGAT
295995 GTATCGATACATGTTA
1 GTATCGATACATGTTA
296011 TTGGGATTTC
Statistics
Matches: 30, Mismatches: 6, Indels: 1
0.81 0.16 0.03
Matches are distributed among these distances:
20 14 0.47
21 16 0.53
ACGTcount: A:0.37, C:0.12, G:0.19, T:0.32
Consensus pattern (21 bp):
GTATCGATACATGTTAAAGAT
Found at i:296918 original size:17 final size:18
Alignment explanation
Indices: 296891--296924 Score: 52
Period size: 17 Copynumber: 1.9 Consensus size: 18
296881 GGGATAACAA
296891 AAAGTGGGAGTAATGATT
1 AAAGTGGGAGTAATGATT
*
296909 AAAG-GGGAGTACTGAT
1 AAAGTGGGAGTAATGAT
296925 GAAAACCAAG
Statistics
Matches: 15, Mismatches: 1, Indels: 1
0.88 0.06 0.06
Matches are distributed among these distances:
17 11 0.73
18 4 0.27
ACGTcount: A:0.38, C:0.03, G:0.35, T:0.24
Consensus pattern (18 bp):
AAAGTGGGAGTAATGATT
Found at i:298567 original size:12 final size:11
Alignment explanation
Indices: 298548--298623 Score: 79
Period size: 12 Copynumber: 6.9 Consensus size: 11
298538 AGAGAAAGAA
298548 GAGATAGGAGG
1 GAGATAGGAGG
298559 GATGATAGGAGG
1 GA-GATAGGAGG
298571 AGAGATAGGA--
1 -GAGATAGGAGG
*
298581 GAGATAGTA--
1 GAGATAGGAGG
298590 GAGATAGGAGG
1 GAGATAGGAGG
298601 GATGATAGGAGG
1 GA-GATAGGAGG
298613 AGAGATAGGAG
1 -GAGATAGGAG
298624 AGATAATAGA
Statistics
Matches: 57, Mismatches: 2, Indels: 11
0.81 0.03 0.16
Matches are distributed among these distances:
9 16 0.28
11 4 0.07
12 33 0.58
13 4 0.07
ACGTcount: A:0.39, C:0.00, G:0.47, T:0.13
Consensus pattern (11 bp):
GAGATAGGAGG
Found at i:298582 original size:9 final size:9
Alignment explanation
Indices: 298568--298628 Score: 65
Period size: 9 Copynumber: 7.1 Consensus size: 9
298558 GGATGATAGG
298568 AGGAGAGAT
1 AGGAGAGAT
298577 AGGAGAGAT
1 AGGAGAGAT
*
298586 AGTAGAGAT
1 AGGAGAGAT
*
298595 AGGAGGGAT
1 AGGAGAGAT
* *
298604 --GATAG-G
1 AGGAGAGAT
298610 AGGAGAGAT
1 AGGAGAGAT
298619 AGGAGAGAT
1 AGGAGAGAT
298628 A
1 A
298629 ATAGAGAGAG
Statistics
Matches: 41, Mismatches: 8, Indels: 6
0.75 0.15 0.11
Matches are distributed among these distances:
7 3 0.07
8 4 0.10
9 34 0.83
ACGTcount: A:0.43, C:0.00, G:0.44, T:0.13
Consensus pattern (9 bp):
AGGAGAGAT
Found at i:298597 original size:42 final size:42
Alignment explanation
Indices: 298538--298656 Score: 193
Period size: 42 Copynumber: 2.8 Consensus size: 42
298528 TAGCCCTCAA
* *
298538 AGAGAAAGAAGAGATAGGAGGGATGATAGGAGGAGAGATAGG
1 AGAGATAGTAGAGATAGGAGGGATGATAGGAGGAGAGATAGG
298580 AGAGATAGTAGAGATAGGAGGGATGATAGGAGGAGAGATAGG
1 AGAGATAGTAGAGATAGGAGGGATGATAGGAGGAGAGATAGG
* * *
298622 AGAGATAATAGAGAGAGGAGGGATGACAGGAGGAG
1 AGAGATAGTAGAGATAGGAGGGATGATAGGAGGAG
298657 GAGAGAAGAA
Statistics
Matches: 72, Mismatches: 5, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
42 72 1.00
ACGTcount: A:0.43, C:0.01, G:0.45, T:0.11
Consensus pattern (42 bp):
AGAGATAGTAGAGATAGGAGGGATGATAGGAGGAGAGATAGG
Found at i:298632 original size:12 final size:12
Alignment explanation
Indices: 298550--298637 Score: 59
Period size: 12 Copynumber: 7.9 Consensus size: 12
298540 AGAAAGAAGA
*
298550 GATAGGAGGGAT
1 GATAGGAGAGAT
298562 GATAGGAGGAGA-
1 GATAGGA-GAGAT
298574 GATA-G-GAGA-
1 GATAGGAGAGAT
*
298583 GATA-G-TAGA-
1 GATAGGAGAGAT
*
298592 GATAGGAGGGAT
1 GATAGGAGAGAT
298604 GATAGGAGGAGA-
1 GATAGGA-GAGAT
298616 GATAGGAGAGAT
1 GATAGGAGAGAT
*
298628 AATA-GAGAGA
1 GATAGGAGAGA
298638 GGAGGGATGA
Statistics
Matches: 64, Mismatches: 6, Indels: 13
0.77 0.07 0.16
Matches are distributed among these distances:
9 16 0.25
10 1 0.02
11 13 0.20
12 28 0.44
13 6 0.09
ACGTcount: A:0.42, C:0.00, G:0.44, T:0.14
Consensus pattern (12 bp):
GATAGGAGAGAT
Found at i:306840 original size:12 final size:12
Alignment explanation
Indices: 306820--306854 Score: 54
Period size: 12 Copynumber: 2.9 Consensus size: 12
306810 GAGACATAGT
306820 AGAGATAGGAGG
1 AGAGATAGGAGG
306832 -GATGATAGGAGG
1 AGA-GATAGGAGG
306844 AGAGATAGGAG
1 AGAGATAGGAG
306855 AGATAATAGA
Statistics
Matches: 21, Mismatches: 0, Indels: 4
0.84 0.00 0.16
Matches are distributed among these distances:
11 2 0.10
12 17 0.81
13 2 0.10
ACGTcount: A:0.40, C:0.00, G:0.49, T:0.11
Consensus pattern (12 bp):
AGAGATAGGAGG
Found at i:306847 original size:24 final size:24
Alignment explanation
Indices: 306778--306863 Score: 76
Period size: 24 Copynumber: 3.8 Consensus size: 24
306768 AAGAGAAAGA
*
306778 AGAGATAGGAGGGATGATAAGAGG
1 AGAGATAGGAGGGATGATAGGAGG
* * *
306802 GGAGATAGGA--GA-CAT---AGT
1 AGAGATAGGAGGGATGATAGGAGG
306820 AGAGATAGGAGGGATGATAGGAGG
1 AGAGATAGGAGGGATGATAGGAGG
* *
306844 AGAGATAGGAGAGATAATAG
1 AGAGATAGGAGGGATGATAG
306864 AGAGAGGAGG
Statistics
Matches: 48, Mismatches: 8, Indels: 12
0.71 0.12 0.18
Matches are distributed among these distances:
18 11 0.23
20 2 0.04
21 4 0.08
22 2 0.04
24 29 0.60
ACGTcount: A:0.42, C:0.01, G:0.43, T:0.14
Consensus pattern (24 bp):
AGAGATAGGAGGGATGATAGGAGG
Found at i:306863 original size:12 final size:12
Alignment explanation
Indices: 306823--306868 Score: 51
Period size: 12 Copynumber: 3.9 Consensus size: 12
306813 ACATAGTAGA
*
306823 GATAGGAGGGAT
1 GATAGGAGAGAT
306835 GATAGGAGGAGA-
1 GATAGGA-GAGAT
306847 GATAGGAGAGAT
1 GATAGGAGAGAT
*
306859 AATA-GAGAGA
1 GATAGGAGAGA
306869 GGAGGGATGA
Statistics
Matches: 30, Mismatches: 2, Indels: 5
0.81 0.05 0.14
Matches are distributed among these distances:
11 10 0.33
12 17 0.57
13 3 0.10
ACGTcount: A:0.43, C:0.00, G:0.43, T:0.13
Consensus pattern (12 bp):
GATAGGAGAGAT
Found at i:306884 original size:42 final size:42
Alignment explanation
Indices: 306778--306891 Score: 165
Period size: 42 Copynumber: 2.7 Consensus size: 42
306768 AAGAGAAAGA
* * *
306778 AGAGATAGGAGGGATGATAAGAGGGGAGATAGGAGACATAGT
1 AGAGATAGGAGGGATGATAGGAGGAGAGATAGGAGACATAAT
*
306820 AGAGATAGGAGGGATGATAGGAGGAGAGATAGGAGAGATAAT
1 AGAGATAGGAGGGATGATAGGAGGAGAGATAGGAGACATAAT
* *
306862 AGAGAGAGGAGGGATGACAGGAGGAAGAGA
1 AGAGATAGGAGGGATGATAGGAGG-AGAGA
306892 GAAGAAGATG
Statistics
Matches: 65, Mismatches: 6, Indels: 1
0.90 0.08 0.01
Matches are distributed among these distances:
42 60 0.92
43 5 0.08
ACGTcount: A:0.42, C:0.02, G:0.45, T:0.11
Consensus pattern (42 bp):
AGAGATAGGAGGGATGATAGGAGGAGAGATAGGAGACATAAT
Found at i:313989 original size:461 final size:458
Alignment explanation
Indices: 313114--314304 Score: 1509
Period size: 461 Copynumber: 2.5 Consensus size: 458
313104 TCTTTTCAAG
* * *
313114 ACTAGGAAGCCAAAAACACATTCCCTTGATTAGGAAACATGACATTGATGCTTTGGTGTCAGAAG
1 ACTAGGAAGCCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTC-GCAG
* * * * * *
313179 AGAAGCTTTTCTTTCCACCATTTTCGATAGAATCAAAGTTTATGTCTTAAATACAACAAAAAAGA
65 A-AAGCTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGA
* * *
313244 ATACTCTTACTAATCCTCATCCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTACAGT
129 ATACTCATACTAATCCCCATCTTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATT--AG-
* * * *
313309 AATACATGATATTGATGCTTTAGTTTCGTAAGAAAGGCA-TTTTCCCACCAATTTTCGTAAGGTC
191 GATACATCATATTGATGCTTTAGTTTCGCAAGAAAGG-ATTTTTCCCACCAATTTTTGTAAGGTC
*
313373 TAAGTTCGGGCCTCAAATGAGACAAACATAGATTCTAGTAATGATCTTCATTCATTTTCTGAATA
255 TAAGTTCAGGCCTCAAATGAGACAAACATAGATTCTAGTAATGATCTTCATTCATTTTCTGAATA
* * * * *
313438 GGTATTATAAACACATTTTCCTCACAGGGATAAAATGATATTGATGATTTTTTTGCATGGAAATC
320 GGTACTATAAACACATTCTCCTCACAAGGATAAAATGATATTAATGATTTTTTTGCATGAAAATC
* *
313503 TTTCCTTTGCCCTATTTTCCTTTAAATCAATGTTCATACCTTAAATAAGACAAACATCGATTCTC
385 TTTCCTTTGCCCTATTTTCCTTTAAATCAAAGTTCATAACTTAAATAAGACAAACATCGATTCTC
*
313568 GTAACAG-T
450 ATAACAGTT
* * * *
313576 -CTAGGAAGCCAAAAACACTTTCCCTTCTTTAGGATGCATGACGTTGATGCTTTGGTGTCGCGAG
1 ACTAGGAAGCCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGC-AG
* * *
313640 AAAGGCTTTTCTTTCCTCCATTTTTTGGTAGAATCAAAGATTGTCTCTTAAATACGACAAACATG
65 AAA-GCTTTTCTTTCCACCA-TTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATG
*
313705 AATACTCATACTAATCCCCGTCTTTTTCAGGATTAGGCACCATAAACATAGTCTT-TTAATTAGG
128 AATACTCATACTAATCCCCATCTTTTTCAGGATTAGGCACCATAAACATAGTCTTCTT-ATTAGG
*
313769 ATACATCATATTGATGCTTTCGTTTCGCAAGAAATGGATTTTTCCCACCAATTTTTGTAAGGTCT
192 ATACATCATATTGATGCTTTAGTTTCGCAAGAAA-GGATTTTTCCCACCAATTTTTGTAAGGTCT
* * * * * *
313834 AAGTTCATGCCTCAAATGAGGCAAGCATGGATTCTAGTAATGATCTTCATTCATTTTGTGAGTAG
256 AAGTTCAGGCCTCAAATGAGACAAACATAGATTCTAGTAATGATCTTCATTCATTTTCTGAATAG
* *
313899 GTACTATAAACACATTCTCCTCATAAGGAT-AAATGGTATTAATGATTTTCTTTTGCATGAAAAT
321 GTACTATAAACACATTCTCCTCACAAGGATAAAATGATATTAATGA-TTT-TTTTGCATGAAAAT
* *
313963 CTGTT-CTTTGCCCTATTTTTCTTTAAATCAAAGTTCATAACTTAAATAAGACAAGCATCGATTC
384 CT-TTCCTTTGCCCTATTTTCCTTTAAATCAAAGTTCATAACTTAAATAAGACAAACATCGATTC
314027 TCATAACAGTCTCCATTCTTTT
448 TCATAACAG-----------TT
314049 CAAGACTAGGAAGCCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCG
1 ----ACTAGGAAGCCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCG
* *
314114 CAGGAAATGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTC-TAAGTACGACAAAC
62 CA-GAAA-GCTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAAC
* **
314178 ATGAATACTCATACTAATCCCTATTCTTTTT-AGGATTAAACACCATAAACATAGTCTTCTTATT
125 ATGAATACTCATACTAATCCCCA-TCTTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATT
** * * ** *
314242 AGGATACATCATA-ACATAGCTTTGGTTTCGCAAGAAAGGCTTTCTTCTTACAAATTTTTGTAA
189 AGGATACATCATATTGAT-GCTTTAGTTTCGCAAGAAAGGATTT-TTCCCACCAATTTTTGTAA
314305 ACTCTAAAAA
Statistics
Matches: 633, Mismatches: 65, Indels: 48
0.85 0.09 0.06
Matches are distributed among these distances:
459 45 0.07
460 119 0.19
461 151 0.24
462 92 0.15
473 1 0.00
475 7 0.01
476 109 0.17
477 34 0.05
478 75 0.12
ACGTcount: A:0.31, C:0.19, G:0.15, T:0.35
Consensus pattern (458 bp):
ACTAGGAAGCCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAGA
AAGCTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAAT
ACTCATACTAATCCCCATCTTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAGGATAC
ATCATATTGATGCTTTAGTTTCGCAAGAAAGGATTTTTCCCACCAATTTTTGTAAGGTCTAAGTT
CAGGCCTCAAATGAGACAAACATAGATTCTAGTAATGATCTTCATTCATTTTCTGAATAGGTACT
ATAAACACATTCTCCTCACAAGGATAAAATGATATTAATGATTTTTTTGCATGAAAATCTTTCCT
TTGCCCTATTTTCCTTTAAATCAAAGTTCATAACTTAAATAAGACAAACATCGATTCTCATAACA
GTT
Found at i:314757 original size:158 final size:157
Alignment explanation
Indices: 314584--315744 Score: 441
Period size: 158 Copynumber: 7.3 Consensus size: 157
314574 TTTTTTTCAG
* * * *
314584 GATTAGGCGCTATAAACATAGTCTTCTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAAG
1 GATTAGGCACTATAAACACA-TCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCACAAG
** * * *
314649 AAAGGGATTTTTCCCAAAAATATTTGTAAAGTCTAAGTTCGTGCCTCAAATTAGACAAACATGGA
65 AAAGGTTTTTTTTCC-AAAATTTTTGTAAAGTCTAAATTCGTGCCTCAAATTAGACAAACATGGA
*
314714 TTCTAATAATGA-TCTTCATTCATTTTGT
129 TTCTAATAATGAGTCTCCATTCATTTTGT
* * * * ** * *
314742 GATTAGGCACTATAAACACATTTTC-CTATTAGGATAAATGATATTAATGATTTTCTTTTACATG
1 GATTAGGCACTATAAACACATCTTCTC-ATTAGGATACATGATATTGATGCTTTGGTTTCACA-A
** * * * * * * * * * *
314806 GAAATCTTTTCTTTGCC-ATATTTTTCTTAAAATC-AAATATCATCCCTTAAATAAGACAAGCGT
64 GAAAGGTTTT-TTTTCCAAAATTTTT-GTAAAGTCTAAAT-TCGTGCCTCAAATTAGACAAACAT
*** * * * *
314869 CTTTTCTCAA-AA-CATTCTCCATTCTTTTTTGAA
126 GGATTCT-AATAATGAGTCTCCATTC-ATTTTG-T
* * * * * *
314902 GATTGGGAAGCCA-AAACACAT-TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACA
1 GATTAGGCA-CTATAAACACATCT-TC-TCATTAGGATACATGATATTGATGCTTTGGTTTCACA
* * ** * ** *
314965 AGAAATGCTTTTCTTTCCACCATTTTTGATAGAA-TC-AAAGTT--TGTCTCATAAGTGCGACGA
63 AGAAA-GGTTTTTTTTCCAAAATTTTTG-TA-AAGTCTAAA-TTCGTGCCTCA-AA-TTAGACAA
* * * * *
315026 ACATGAATACTTATACT-AGTC-CCAATT-TTTTTAG-
122 ACATGGATTCTAATAATGAGTCTCC-ATTCATTTT-GT
* * * * * *
315060 GATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATCATATTAATGCTTTGGTTTCGCAAC
1 GATTAGGCACTATAAACACA-TCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCACAAG
* *
315125 AAAGGTTTTTTTTCCACCAATTTTTTGTAAAGTCTAAATTTGTGCCTCAAATTAGACAAACATGG
65 AAAGGTTTTTTTTCCA--AAATTTTTGTAAAGTCTAAATTCGTGCCTCAAATTAGACAAACATGG
*
315190 ATTCTAATAATGA-TCTTCATTCATTTTGT
128 ATTCTAATAATGAGTCTCCATTCATTTTGT
* * * ** * *
315219 GATTAGGCACTATAAACACATTTTC-CTATTAGGATAAATGATATTGATGGTTTTCTTTTACATG
1 GATTAGGCACTATAAACACATCTTCTC-ATTAGGATACATGATATTGATGCTTTGGTTTCACA-A
* * * * * * * * *
315283 GAAA-TTTTTTCTTTGCC-ATATTTTTCTTAAAATC-AAATATCGTCCCTTAAATAAGACAAGCG
64 GAAAGGTTTTT-TTT-CCAAAATTTTT-GTAAAGTCTAAAT-TCGTGCCTCAAATTAGACAAACA
*** * * * * *
315345 TCTTTTCTCAA-AA-CATTATCCATTCTTTTTTGAA
125 TGGATTCT-AATAATGAGTCTCCATTC-ATTTTG-T
* * * * * *
315379 GATTGGGAAGCCA-AAACACAT-TCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCACA
1 GATTAGGCA-CTATAAACACATCT-TC-TCATTAGGATACATGATATTGATGCTTTGGTTTCACA
* * ** * * ** *
315442 AGAAATGCTTTTCTTTCCACCATTTTTCATAGAA-TC-AAAGTT--TGTCTCATAAGTGCGACGA
63 AGAAA-GGTTTTTTTTCCAAAATTTTT-GTA-AAGTCTAAA-TTCGTGCCTCA-AA-TTAGACAA
* * * * * * ** **
315503 ACAAGAATACTTATACT-AATC-CC-TGTTTTTTTCA
122 ACATGGATTCTAATAATGAGTCTCCAT-TCATTTTGT
* * * * *
315537 GAATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATCATATTAATGCTTTGGTTTCGCAA
1 G-ATTAGGCACTATAAACACA-TCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCACAA
* * * * *
315602 CAAAGGTTTTTTTTCCACCAATTTTTTGTAAAGTCTAAGTTTGTGCCTCAAATGAGACAAACATG
64 GAAAGGTTTTTTTTCCA--AAATTTTTGTAAAGTCTAAATTCGTGCCTCAAATTAGACAAACATG
* * * **
315667 GATTTTAGTAAAGA-TCTTAACTT-ATTTTGT
127 GATTCTAATAATGAGTCTCCA-TTCATTTTGT
* * *
315697 GATTAGGCACTAT--ACATATTCTCCTCATTAGGATAAATGATATTGATG
1 GATTAGGCACTATAAACACA-TCTTCTCATTAGGATACATGATATTGATG
315745 ATTTTCTTTT
Statistics
Matches: 727, Mismatches: 201, Indels: 151
0.67 0.19 0.14
Matches are distributed among these distances:
156 1 0.00
157 99 0.14
158 232 0.32
159 165 0.23
160 84 0.12
161 133 0.18
162 13 0.02
ACGTcount: A:0.31, C:0.17, G:0.14, T:0.38
Consensus pattern (157 bp):
GATTAGGCACTATAAACACATCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCACAAGA
AAGGTTTTTTTTCCAAAATTTTTGTAAAGTCTAAATTCGTGCCTCAAATTAGACAAACATGGATT
CTAATAATGAGTCTCCATTCATTTTGT
Found at i:316072 original size:476 final size:472
Alignment explanation
Indices: 314453--317360 Score: 3649
Period size: 477 Copynumber: 6.2 Consensus size: 472
314443 CCATTCTTTA
* * ** *
314453 ATTAGGATACAAGACATTGATGCTTTGGTGTCATGAGAAAAGCTTTTCTTTCCACTGTTTTTGAT
1 ATTAGGATACATGACATTGATGCTTTGGTGTTACAAGAAAAGCTTTTCTTTCCACCGTTTTTGAT
* ** ** * ***
314518 GGAATCAAAGTTTGTCTCTTAAATTGGACAAACAACAATGCTCATACTAATCTGAGTTTTTTTCA
66 AGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTTTTTT-A
* * * *
314583 GGATTAGGCGCTATAAACATAGTCTTCTCATTAGGATACATGACATTGATGCTTTGGTTTCGCAA
130 GGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAA
* ** *
314648 GAAAGGGATTTTTCCCAAAAATATTTGTAAAGTCTAAGTTCGTGCCTCAAATTAGACAAACATGG
195 GAAAGGCATTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATTAGACAAACATGG
* *
314713 ATTCTAATAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTTTCCTATTAGGATA
260 ATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTAT-AACACATTCTCCTATTAGGATA
* * *
314778 AATGATATTAATGATTTTCTTTTACATGGAAATCTTTTCTTTGCCATATTTTTCTTAAAATCAAA
324 AATGATATTGATGATTTTCTTTTACATGGAAATCTTTTCTTT-CCCTATTTTCCTTAAAATCAAA
* * ** *
314843 TATCATCCCTTAAATAAGACAAGCGTCTTTTCTCAAAACATTCTCCATTCTTTTTTGAAGATTGG
388 GATCATCCCTTAAATAAGACAAGCATCGATTCTCAAAACATTCTCCATTC--TTTTCAAGATTGG
314908 GAAGCCAAAACACATTCCCTTC
451 GAAGCCAAAACACATTCCCTTC
* * *
314930 ATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAAATGCTTTTCTTTCCACCATTTTTGAT
1 ATTAGGATACATGACATTGATGCTTTGGTGTTACAAGAAAAGCTTTTCTTTCCACCGTTTTTGAT
* * * * * * **
314995 AGAATCAAAGTTTGTCTCATAAGTGCGACGAACATGAATACTTATACTAGTCCCAATTTTTTTAG
66 AGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTTTTTTAG
* *
315060 GATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATCATATTAATGCTTTGGTTTCGCAAC
131 GATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAAG
** * * *
315125 AAAGGTTTTTTTTCCACCAATTTTTTGTAAAGTCTAAATTTGTGCCTCAAATTAGACAAACATGG
196 AAAGGCATTTTTCCCACCAA-TTTTTGTAAAGTCTAAGTTCGTGCCTCAAATTAGACAAACATGG
* *
315190 ATTCTAATAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTTTCCTATTAGGATA
260 ATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTAT-AACACATTCTCCTATTAGGATA
* * * *
315255 AATGATATTGATGGTTTTCTTTTACATGGAAATTTTTTCTTTGCCATATTTTTCTTAAAATCAAA
324 AATGATATTGATGATTTTCTTTTACATGGAAATCTTTTCTTT-CCCTATTTTCCTTAAAATCAAA
* * * ** * *
315320 TATCGTCCCTTAAATAAGACAAGCGTCTTTTCTCAAAACATTATCCATTCTTTTTTGAAGATTGG
388 GATCATCCCTTAAATAAGACAAGCATCGATTCTCAAAACATTCTCCATTC--TTTTCAAGATTGG
315385 GAAGCCAAAACACATTCCCTTC
451 GAAGCCAAAACACATTCCCTTC
* * * *
315407 ATTAGGATACATGACATTGATGCTTTGGTGTCACAAGAAATGCTTTTCTTTCCACCATTTTTCAT
1 ATTAGGATACATGACATTGATGCTTTGGTGTTACAAGAAAAGCTTTTCTTTCCACCGTTTTTGAT
* * * * * * *
315472 AGAATCAAAGTTTGTCTCATAAGTGCGACGAACAAGAATACTTATACTAATCCCTGTTTTTTTCA
66 AGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTTTTTT-A
* *
315537 GAATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATCATATTAATGCTTTGGTTTCGCAA
130 GGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAA
* ** * * *
315602 CAAAGGTTTTTTTTCCACCAATTTTTTGTAAAGTCTAAGTTTGTGCCTCAAATGAGACAAACATG
195 GAAAGGCATTTTTCCCACCAA-TTTTTGTAAAGTCTAAGTTCGTGCCTCAAATTAGACAAACATG
* * * *
315667 GATTTTAGTAAAGATCTTAACTT-ATTTTGTGATTAGGCACTAT-ACATATTCTCCTCATTAGGA
259 GATTCTAGTAATGATCTTCA-TTCATTTTGTGATTAGGCACTATAACACATTCTCCT-ATTAGGA
* * * * *
315730 TAAATGATATTGATGATTTTCTTTTGCCTGAAAATCTTTTCTTTACCCT-TTTGTCCTTCAAATA
322 TAAATGATATTGATGATTTTCTTTTACATGGAAATCTTTTCTTT-CCCTATTT-TCCTTAAAATC
* * * * * *
315794 AAAGCTCA-CACCTTAAGTAAGATAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGACT
385 AAAGATCATC-CCTTAAATAAGACAAGCATCGATTCTCAAAACATTCTCCATTCTTTTCAAGATT
315858 GGGAAGCCAAAAACACATTCCCTTC
449 GGGAAGCC-AAAACACATTCCCTTC
* * * *
315883 ATTAGGAAACATAACAGTGATGCTTTGGTGTTGCAAGAAAAGCTTTTCTTTCCACCGTTTTTGAT
1 ATTAGGATACATGACATTGATGCTTTGGTGTTACAAGAAAAGCTTTTCTTTCCACCGTTTTTGAT
* *
315948 AGAATCGAAGTTTGTCTTTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTCTTTTTA
66 AGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTT-TTTTTA
* *
316013 GGATTAGGCGCCATAAACATAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTTGCAA
130 GGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAA
* * * *
316078 GAAAGGCTTTTTTCCCACCAATTATTGTAAAGTCTAAGTTCATGCCTCAAA-T-GACAATCATGG
195 GAAAGGCATTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATTAGACAAACATGG
* * * * *
316141 ATTCTAGTAATTATCGTCATTCATTTTATGATTAGGCACTATATACACATTCTCCCACTAGGATA
260 ATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATA-ACACATTCTCCTATTAGGATA
* * *
316206 AGTGATATTGATGGTTTTCTTTTACATGGAGA---------T--C--TTTT-CTT----T----G
324 AATGATATTGATGATTTTCTTTTACATGGAAATCTTTTCTTTCCCTATTTTCCTTAAAATCAAAG
* *
316249 ------CCTTAAATAAGGCAAGCATCGTTTCT-AACAACATTCTCCATTCTTTTCAAGATTGGGA
389 ATCATCCCTTAAATAAGACAAGCATCGATTCTCAA-AACATTCTCCATTCTTTTCAAGATTGGGA
*
316307 AGCCAAAGCACATTCCCTTC
453 AGCCAAAACACATTCCCTTC
* *
316327 ATTAGGATACATGACATTGATGCTTTGGTGTTGCAAGTAAAGCTTTTCTTTCCACCGTTTTTGAT
1 ATTAGGATACATGACATTGATGCTTTGGTGTTACAAGAAAAGCTTTTCTTTCCACCGTTTTTGAT
* * *
316392 AGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAATA--CGTACTAATCCCCATTCTTTTTA
66 AGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTT-TTTTTA
* * ** * *
316455 GGATTAGGCACTATAAACGTAGTCTTCTCATTAAAATACATGATATTG-TAGCTTTGGTTTTGCA
130 GGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATCATATTGAT-GCTTTGGTTTCGCA
316519 AGAAAGGCATTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTC-AATTAAGACAAACAT
194 AGAAAGGCATTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATT-AGACAAACAT
* *
316583 GGATTCTACTAATGATCTTTATTCATTTTGTGATTAGGCACTATAAACACATTCTCCCT-TTAGG
258 GGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTAT-AACACATTCT-CCTATTAGG
* * * *
316647 ATAAATGATATTGATGATTTTCTTTTACATGGAAATCTTTTGTTTGCCTTATTTTTCGTAAAATC
321 ATAAATGATATTGATGATTTTCTTTTACATGGAAATCTTTTCTTT-CCCTATTTTCCTTAAAATC
* *
316712 AAAGTTCATCCCTTAAATAATG-CAAGCATC-ATT-TCTAACGACATTCTCCATTCTTTTCAAGA
385 AAAGATCATCCCTTAAATAA-GACAAGCATCGATTCTC-AA-AACATTCTCCATTCTTTTCAAGA
* *
316774 TTAGGAAGCCAAAGCACATTCCCTTC
447 TTGGGAAGCCAAAACACATTCCCTTC
*
316800 ATTAGGATACATGACATTGATGCTTTGGTGTTGCAAGAAAAGCTTTTCTTTCCACCGTTTTTGAT
1 ATTAGGATACATGACATTGATGCTTTGGTGTTACAAGAAAAGCTTTTCTTTCCACCGTTTTTGAT
* * *
316865 AGAATCAAAGTTTGTCTCTCAAATACAACAAACATGAATGCTCATACTAATCCCCGTCTTTTTTA
66 AGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGT-TTTTTTA
* * * * *
316930 GAATTAGACACCATAAACATAGTCTTCTCATTAAGATACATCGTATTGATGCTTTGGTTTTGCAA
130 GGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAA
* * * *
316995 GAAAGGCATTTTTTCTCACCAATTTTTGTAAAGTCTAAGTTTGTGCCACAATTTAGACAAACATG
195 GAAAGGCA-TTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATTAGACAAACATG
* *
317060 GATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTTTCCTATTAAGAT
259 GATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTAT-AACACATTCTCCTATTAGGAT
* * *
317125 AAATGATATTGAT-ATTTTCTTTTGCATGGAAATCTTTTCTTTGCCTATTTTCTTTAAAATCAAA
323 AAATGATATTGATGATTTTCTTTTACATGGAAATCTTTTCTTTCCCTATTTTCCTTAAAATCAAA
* * * *
317189 GTTCATCCCATAAATAAGA-AAGGCATCAATTCTCATAAC-TGTCTCCATTCTTTTCAAGATTGG
388 GATCATCCCTTAAATAAGACAA-GCATCGATTCTCAAAACAT-TCTCCATTCTTTTCAAGATTGG
* *
317252 GAAGCCAAAACACATTCCCCTG
451 GAAGCCAAAACACATTCCCTTC
* * * *
317274 ATTAGGATACATGACATTGATGCTTTGGTGTCATAAGAAATGCTTTTCTTTCCACCATTTTTGAT
1 ATTAGGATACATGACATTGATGCTTTGGTGTTACAAGAAAAGCTTTTCTTTCCACCGTTTTTGAT
*
317339 AGAATCAAATTTTGTCTCTTAA
66 AGAATCAAAGTTTGTCTCTTAA
317361 GTATGACATA
Statistics
Matches: 2164, Mismatches: 205, Indels: 127
0.87 0.08 0.05
Matches are distributed among these distances:
441 3 0.00
442 124 0.06
444 206 0.10
445 56 0.03
451 1 0.00
453 1 0.00
455 1 0.00
458 4 0.00
459 5 0.00
460 1 0.00
461 3 0.00
462 1 0.00
463 1 0.00
465 1 0.00
467 1 0.00
471 1 0.00
472 4 0.00
473 215 0.10
474 195 0.09
475 171 0.08
476 414 0.19
477 589 0.27
478 164 0.08
479 2 0.00
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (472 bp):
ATTAGGATACATGACATTGATGCTTTGGTGTTACAAGAAAAGCTTTTCTTTCCACCGTTTTTGAT
AGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAATACTCATACTAATCCCCGTTTTTTTAG
GATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAAG
AAAGGCATTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATTAGACAAACATGGA
TTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAACACATTCTCCTATTAGGATAAA
TGATATTGATGATTTTCTTTTACATGGAAATCTTTTCTTTCCCTATTTTCCTTAAAATCAAAGAT
CATCCCTTAAATAAGACAAGCATCGATTCTCAAAACATTCTCCATTCTTTTCAAGATTGGGAAGC
CAAAACACATTCCCTTC
Found at i:317105 original size:159 final size:159
Alignment explanation
Indices: 316325--317137 Score: 409
Period size: 159 Copynumber: 5.1 Consensus size: 159
316315 CACATTCCCT
* * * * *
316325 TCATTAGGATACATGACATTGATGCTTTGGTGTTGCAAGTAAA-GCTTTTCTTTC-CACC-GTTT
1 TCATTAAGATACATGATATTGATGCTTTGGTTTTGCAAG-AAAGGCATTT-TTTCTCACCAATTT
* * * * * * * * *
316387 TTGATAGAA-TCAAAGTTTGT-CTCTTAAAT-ATGACAAACAT-GA--ATACGTACTAATCCCCA
64 TTG-TA-AAGTCAAAGTTCGTGC-CTCAATTAACGACAAACATGGATTCTAAGTAATGATCTCCA
**
316446 TTCTTTT-TAGGATTAGGCACTATAAACGTAGTCTTC
126 TTCTTTTGT--GATTAGGCACTATAAACACAGTC-TC
* *
316482 TCATTAAAATACATGATATTG-TAGCTTTGGTTTTGCAAGAAAGGCA-TTTTTCCCACCAATTTT
1 TCATTAAGATACATGATATTGAT-GCTTTGGTTTTGCAAGAAAGGCATTTTTTCTCACCAATTTT
* * **
316545 TGTAAAGTCTAAGTTCGTGCCTCAATTAA-GACAAACATGGATTCT-ACTAATGATCTTTATTCA
65 TGTAAAGTCAAAGTTCGTGCCTCAATTAACGACAAACATGGATTCTAAGTAATGATCTCCATTC-
*
316608 TTTTGTGATTAGGCACTATAAACACATTCTC
129 TTTTGTGATTAGGCACTATAAACACAGTCTC
* * * * * ** * * * **
316639 CCTTTAGGATAAATGATATTGATGATTTTCTTTTACATGGAAA-TC-TTTTGTT-TGC-CTTATT
1 TCATTAAGATACATGATATTGATGCTTTGGTTTTGCA-AGAAAGGCATTTT-TTCT-CACCAATT
* * * * * * * *
316700 TTTCGTAAAATCAAAGTTCATCCCTTAAATAATG-CAAGCAT-CATTTCTAACG-ACAT--TCTC
63 TTT-GTAAAGTCAAAGTTCGTGCCTCAATTAACGACAAACATGGA-TTCTAA-GTA-ATGATCTC
** * * * * *
316760 CATTCTTTTCAAGATTAGGAAGCCA-AAGCACATTCCC
124 CATTCTTTT-GTGATTAGGCA-CTATAAACACAGTCTC
* * * * * *
316797 TTCATTAGGATACATGACATTGATGCTTTGGTGTTGCAAGAAAAGCTTTTCTTTC-CACC-GTTT
1 -TCATTAAGATACATGATATTGATGCTTTGGTTTTGCAAGAAAGGCATTT-TTTCTCACCAATTT
* * * * * * * * *
316860 TTGATAGAA-TCAAAGTTTGT-CTCTCAAAT-ACAACAAACATGAATGCTCA-TACTAATC-CCC
64 TTG-TA-AAGTCAAAGTTCGTGC-CTCAATTAACGACAAACATGGATTCTAAGTAATGATCTCCA
* * * * *
316920 GTCTTTTTTAGAATTAGACACCATAAACATAGTCTTC
126 TTCTTTTGT-G-ATTAGGCACTATAAACACAGTC-TC
316957 TCATTAAGATACATCG-TATTGATGCTTTGGTTTTGCAAGAAAGGCATTTTTTCTCACCAATTTT
1 TCATTAAGATACAT-GATATTGATGCTTTGGTTTTGCAAGAAAGGCATTTTTTCTCACCAATTTT
* * * * *
317021 TGTAAAGTCTAAGTTTGTGCCACAATTTA-GACAAACATGGATTCT-AGTAATGATCTTCATTCA
65 TGTAAAGTCAAAGTTCGTGCCTCAATTAACGACAAACATGGATTCTAAGTAATGATCTCCATTC-
* *
317084 TTTTGTGATTAGGCACTATAAACACATTTTC
129 TTTTGTGATTAGGCACTATAAACACAGTCTC
*
317115 -CTATTAAGATAAATGATATTGAT
1 TC-ATTAAGATACATGATATTGAT
317138 ATTTTCTTTT
Statistics
Matches: 493, Mismatches: 109, Indels: 107
0.70 0.15 0.15
Matches are distributed among these distances:
155 6 0.01
156 35 0.07
157 92 0.19
158 142 0.29
159 186 0.38
160 26 0.05
161 6 0.01
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (159 bp):
TCATTAAGATACATGATATTGATGCTTTGGTTTTGCAAGAAAGGCATTTTTTCTCACCAATTTTT
GTAAAGTCAAAGTTCGTGCCTCAATTAACGACAAACATGGATTCTAAGTAATGATCTCCATTCTT
TTGTGATTAGGCACTATAAACACAGTCTC
Found at i:317979 original size:237 final size:236
Alignment explanation
Indices: 317555--317999 Score: 687
Period size: 237 Copynumber: 1.9 Consensus size: 236
317545 TTCTTTTGCG
* * *
317555 TGGAAATCTTTCTTTGCCTTGTTTTCCTTTAAATCAAAGTTCATACTTTAAATAAGACAAGCATC
1 TGGAAATCTTTCTTTGCCTTATTTTACTTTAAATCAAAGTTCATACCTTAAATAAGACAAGCATC
*
317620 GATTCTCGTAACAGTGTCCATTCTTTTCAAGACTAAGAAGCCAAAAACACAATCCCTTCATTAGG
66 GATTCTCGTAACAGTCTCCATTCTTTTCAAGACTAAGAAGCCAAAAACACAATCCCTTCATTAGG
*
317685 ATACATGACATTGATGCTTTGGTGTCGTAAGAAATACTTTTCTTTCCACCATTTTTGATAGAATC
131 ATACATGACATTGATGCTTTGGTGTCATAAGAAATACTTTTCTTTCCACCATTTTTGATAGAATC
317750 AAAGTTTGTCTCTTTGTCCTATTGAGTATTTTTTTTTTGGT
196 AAAGTTTGTCTCTTTGTCCTATTGAGTATTTTTTTTTTGGT
*
317791 TGGAAATCCTTTCTTTGTCC-TATTTTACTTTAAATCAAAGTTCATACCTTAAATAAGGCAAGCA
1 TGGAAAT-CTTTCTTTG-CCTTATTTTACTTTAAATCAAAGTTCATACCTTAAATAAGACAAGCA
* * * * * *
317855 TCGATTCTTGTAATAGTCTCCATTGTTTTCAAGACTAGGTAGCCAAAAACACATTCCCTTCATTA
64 TCGATTCTCGTAACAGTCTCCATTCTTTTCAAGACTAAGAAGCCAAAAACACAATCCCTTCATTA
* * * * *
317920 GGATACATGACATTGATGCTTTTGTGTCATGAGAAA-AGGTTTTCTTTCCATCGTTTTTGATAGA
129 GGATACATGACATTGATGCTTTGGTGTCATAAGAAATA-CTTTTCTTTCCACCATTTTTGATAGA
*
317984 ATGAAAGTTTGTCTCT
193 ATCAAAGTTTGTCTCT
318000 CAAATATGAC
Statistics
Matches: 188, Mismatches: 18, Indels: 5
0.89 0.09 0.02
Matches are distributed among these distances:
236 8 0.04
237 178 0.95
238 2 0.01
ACGTcount: A:0.28, C:0.18, G:0.15, T:0.39
Consensus pattern (236 bp):
TGGAAATCTTTCTTTGCCTTATTTTACTTTAAATCAAAGTTCATACCTTAAATAAGACAAGCATC
GATTCTCGTAACAGTCTCCATTCTTTTCAAGACTAAGAAGCCAAAAACACAATCCCTTCATTAGG
ATACATGACATTGATGCTTTGGTGTCATAAGAAATACTTTTCTTTCCACCATTTTTGATAGAATC
AAAGTTTGTCTCTTTGTCCTATTGAGTATTTTTTTTTTGGT
Found at i:318505 original size:317 final size:312
Alignment explanation
Indices: 318072--318750 Score: 898
Period size: 318 Copynumber: 2.2 Consensus size: 312
318062 CATAGTCTTC
* * *
318072 TCATTAGGATACATCATATTGATGCTTTGGTTTTGCAAGAAAGGCATTTTTTCTCACCAATTTTT
1 TCATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGC-TTTTTTCTCACCAATTTTT
* * *
318137 GTATAGTCTAAGTTCATGCCTCAATTGAGACAAACATGATTCTAGTAATGATCTTCATTCATTTT
65 GTAAAGTCTAAGTTCATGCCTCAATTGAGACAAACATGATTCTAATAATGATCTTCACTCATTTT
* * *
318202 GTGATT-AGGCACTATAAACACATTCTCCTATTA-GGATAAATGATGCTGAAGATTTACTTTTGC
130 GTGATTGA-GCACTATAAACACATTCCCCTACTATGGATAAATGATACTGAAGATTTACTTTTGC
* *
318265 ATGGAAATCTTTTCTTTGCCCTATTTTCCTTTAAATCAAAGTTCATACCTTAAATATGACATGTA
194 ATGGAAATCTTTTCTTTGCCCTATTTTCCTTTAAATCAAAGTTCATACCTTAAATAAGACAAGTA
* *
318330 TCAATTCTCGTAACAGTCTCCATTCTTTTCAAGCCTGGGAAGCCAAAAACACATTCCCT
259 TCAATTCTCATAACAGTCTCCATTC---T-AAGCCTGGGAAG-CAAAAACAAATTCCCT
* *
318389 TCATTAGGATACATGACATTAATGCTTTGGTTTCGCAAGAAAAGCTTTTTTCTCACCAATTTTTG
1 TCATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTTTCTCACCAATTTTTG
** * *
318454 TAAAGTCTAAGTTTGTGCCTCCAA-TGAGATGAAGC-TGGATTCTAATAATGATCTTCACTCATT
66 TAAAGTCTAAGTTCATGCCT-CAATTGAGA-CAAACAT-GATTCTAATAATGATCTTCACTCATT
* * * * * *
318517 TTTTGATTGAGCACTATAAACACATTCCCCTCCTATGGATATATGATATTGATGATTTTCTTTTG
128 TTGTGATTGAGCACTATAAACACATTCCCCTACTATGGATAAATGATACTGAAGATTTACTTTTG
** * * *
318582 CATTTAAATCTTTTCTTTGTCCTATTTTCCTTTATATCAAAGTTCATACCTTAAATAAGGCAAGT
193 CATGGAAATCTTTTCTTTGCCCTATTTTCCTTTAAATCAAAGTTCATACCTTAAATAAGACAAGT
* * * *
318647 ATCGATTCTCATAATAGTCTCCATTCTAAGGCTGGGAAGCAAAAACAAATTCCTT
258 ATCAATTCTCATAACAGTCTCCATTCTAAGCCTGGGAAGCAAAAACAAATTCCCT
* * * *
318702 TCATTAGGATACATGATGTTGATGCTTTGGTGTCACGAGAAAAGCTTTT
1 TCATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTT
318751 CTTTCCACTG
Statistics
Matches: 317, Mismatches: 40, Indels: 14
0.85 0.11 0.04
Matches are distributed among these distances:
313 57 0.18
314 11 0.03
315 1 0.00
316 43 0.14
317 99 0.31
318 106 0.33
ACGTcount: A:0.29, C:0.18, G:0.14, T:0.38
Consensus pattern (312 bp):
TCATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTTTCTCACCAATTTTTG
TAAAGTCTAAGTTCATGCCTCAATTGAGACAAACATGATTCTAATAATGATCTTCACTCATTTTG
TGATTGAGCACTATAAACACATTCCCCTACTATGGATAAATGATACTGAAGATTTACTTTTGCAT
GGAAATCTTTTCTTTGCCCTATTTTCCTTTAAATCAAAGTTCATACCTTAAATAAGACAAGTATC
AATTCTCATAACAGTCTCCATTCTAAGCCTGGGAAGCAAAAACAAATTCCCT
Found at i:319382 original size:477 final size:472
Alignment explanation
Indices: 318389--319496 Score: 1466
Period size: 472 Copynumber: 2.3 Consensus size: 472
318379 CACATTCCCT
* * * * *
318389 TCATTAGGATACATGACATTAATGCTTTGGTTTCGCAAGAAAAGCTTTTTTCTCACCAATTTTTG
1 TCATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTG
* * * * *
318454 TAAAGTCTAAGTTTGTGCCTCCAATGAGATGAAGC-TGGATTCTAATAATGATCTTCACTCATTT
66 TAAAGTCTAAGTTTGTGCCTCAAATGAGA-CAAACATGGATTCTAGTAATGATCTTCATTCATTT
* * * * *
318518 TTTGATT-GAGCACTATAAACACATTCCCCTCCTATGGATATATGATATTGATGATTTTCTTTTG
130 TATGATTAG-GCACTATAAACACATTCTCCTCATAAGGATAAATGATATTGATGATTTTCTTTTG
** * * * * *
318582 CATTTAAATCTTTTCTTTGTCCTATTTTCCTTTATATCAAAGTTCATACCTTAAATAAGGCAAGT
194 CATAGAAATCTTTTCTTTGCCCTATTTTCCTCTAAATCAAAGTTCATACCTTAAATAAGACAAGC
* * *
318647 ATCGATTCTCATAATAGTCTCCATTCTAAGGCTGGGAAGCAAAAACAAATTCCTTTCATTAGGAT
259 ATCGACTCTCATAATAGTCTCCATTCTAAGACTAGGAAGCAAAAACAAATTCCTTTCATTAGGAT
** * **
318712 ACATGATGTTGATGCTTTGGTGTCACGAGAAAAGCTTTTCTTTCCACTGTTTTTGATGGAATCAA
324 ACATGACATTGATGCTTTGGTGTCACAAGAAAAGCTTTTCTTTCCACTGTTTTTGATAAAATCAA
* * * *
318777 ATTTTGTCTCTTAAATACGACAAACAAGAATACTCAAACTAATCCGCGTTCTTTTCAGGATTTGG
389 AGTTTGTCTCTTAAATACGACAAACAAGAATACTCAAACTAATCCCCGTTCTTTTCAGGACTAGG
318842 CACCATAAACATAGTCTTC
454 CACCATAAACATAGTCTTC
* * * * *
318861 TAATTAGGATACATCATATTGATGCTTTGGTTTTGCAAGAAAGGCATTTTCCCCACCAATTTTGG
1 TCATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTG
* * * * *
318926 CAAGGTCTAAGTTCGTGCCTCAAATGATACAAACATGGATTCTAGTAATGATCGTCATTCATTTT
66 TAAAGTCTAAGTTTGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTT
*
318991 ATGATTAGGTACTATAAACACATTCTCCTCATAAGGATAAATGATATTGATGATTTTCTTTTGCA
131 ATGATTAGGCACTATAAACACATTCTCCTCATAAGGATAAATGATATTGATGATTTTCTTTTGCA
*
319056 TAGAAATCTTTTCTTTGCCCTATTTTCCTCTAAATTAAAGTTCATACCTTAAATAAGACAAGCAT
196 TAGAAATCTTTTCTTTGCCCTATTTTCCTCTAAATCAAAGTTCATACCTTAAATAAGACAAGCAT
* * *
319121 CGACTCTCGTAATAGTCTCCATTCTTTTCAAGACTAGGAAGCTAGAAACACATTCCTTTCATTAG
261 CGACTCTCATAATAGTCTCCATTC---T-AAGACTAGGAAGC-AAAAACAAATTCCTTTCATTAG
* * * *
319186 GATACATGGCATTGATGCTTTGGTGTCGCAAGAAATGCTTTTCTTTCGACCT-TTTTTGATAAAA
321 GATACATGACATTGATGCTTTGGTGTCACAAGAAAAGCTTTTCTTTCCA-CTGTTTTTGATAAAA
* ** * * * ** *
319250 TGAAAGTTTGTCTCTTAGGTATGAGAAACATGAATACTCATGCTATTCCCCGTTCTTTTCAGGAC
385 TCAAAGTTTGTCTCTTAAATACGACAAACAAGAATACTCAAACTAATCCCCGTTCTTTTCAGGAC
319315 TAGGCACCATAAACATAGTCTTC
450 TAGGCACCATAAACATAGTCTTC
* * * *
319338 TCATTAGGATACATCTTATTGATGCTTTGGTTTCACAAGAAAGGCTTTTTTCCTATCAATTTTTT
1 TCATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAA--TTTT
* * *
319403 TGTAAAGTCTGAGTTTATGCCTCAAATGAGACAAACATGGATTCTAGTAAAGATCTTCATTCATT
64 TGTAAAGTCTAAGTTTGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATT
* *
319468 TTGTGATTAGGCACTATAAACAGATTCTC
129 TTATGATTAGGCACTATAAACACATTCTC
319497 TTCGTGATGA
Statistics
Matches: 544, Mismatches: 82, Indels: 13
0.85 0.13 0.02
Matches are distributed among these distances:
471 3 0.01
472 242 0.44
473 1 0.00
475 1 0.00
476 11 0.02
477 198 0.36
478 2 0.00
479 86 0.16
ACGTcount: A:0.30, C:0.18, G:0.15, T:0.37
Consensus pattern (472 bp):
TCATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTTG
TAAAGTCTAAGTTTGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTT
ATGATTAGGCACTATAAACACATTCTCCTCATAAGGATAAATGATATTGATGATTTTCTTTTGCA
TAGAAATCTTTTCTTTGCCCTATTTTCCTCTAAATCAAAGTTCATACCTTAAATAAGACAAGCAT
CGACTCTCATAATAGTCTCCATTCTAAGACTAGGAAGCAAAAACAAATTCCTTTCATTAGGATAC
ATGACATTGATGCTTTGGTGTCACAAGAAAAGCTTTTCTTTCCACTGTTTTTGATAAAATCAAAG
TTTGTCTCTTAAATACGACAAACAAGAATACTCAAACTAATCCCCGTTCTTTTCAGGACTAGGCA
CCATAAACATAGTCTTC
Found at i:324502 original size:9 final size:9
Alignment explanation
Indices: 324490--324550 Score: 65
Period size: 9 Copynumber: 7.1 Consensus size: 9
324480 TTCTCTCTAT
324490 TATCTCTCC
1 TATCTCTCC
324499 TATCTCTCC
1 TATCTCTCC
*
324508 T-TCTAT-C
1 TATCTCTCC
* *
324515 -ATCCCTTC
1 TATCTCTCC
*
324523 TATCTCTAC
1 TATCTCTCC
324532 TATCTCTCC
1 TATCTCTCC
324541 TATCTCTCC
1 TATCTCTCC
324550 T
1 T
324551 CATTTCATCC
Statistics
Matches: 43, Mismatches: 6, Indels: 6
0.78 0.11 0.11
Matches are distributed among these distances:
7 4 0.09
8 5 0.12
9 34 0.79
ACGTcount: A:0.13, C:0.41, G:0.00, T:0.46
Consensus pattern (9 bp):
TATCTCTCC
Found at i:324514 original size:42 final size:43
Alignment explanation
Indices: 324462--324580 Score: 147
Period size: 42 Copynumber: 2.8 Consensus size: 43
324452 TTCTTCTTTC
* * *
324462 CTCCTCCTATCATCCCTCT-TCTCTCTATTATCTCTCCTATCT
1 CTCCTTCTATCATCCCTCTCTATCTCTACTATCTCTCCTATCT
324504 CTCCTTCTATCATCCCT-TCTATCTCTACTATCTCTCCTATCT
1 CTCCTTCTATCATCCCTCTCTATCTCTACTATCTCTCCTATCT
* * *
324546 CTCC-TCATTTCATCCCTC-CTATCTCTTCTTTCTCT
1 CTCCTTC-TATCATCCCTCTCTATCTCTACTATCTCT
324581 TTGATGGCTA
Statistics
Matches: 68, Mismatches: 6, Indels: 6
0.85 0.08 0.08
Matches are distributed among these distances:
41 3 0.04
42 65 0.96
ACGTcount: A:0.12, C:0.42, G:0.00, T:0.46
Consensus pattern (43 bp):
CTCCTTCTATCATCCCTCTCTATCTCTACTATCTCTCCTATCT
Found at i:324568 original size:33 final size:33
Alignment explanation
Indices: 324490--324580 Score: 85
Period size: 33 Copynumber: 2.7 Consensus size: 33
324480 TTCTCTCTAT
* * *
324490 TATCTCTCCTATCTCTCCTTCTATCATCCCTTC
1 TATCCCTCCTATCTCTCCTTCTCTCATCACTTC
* * * *
324523 TATCTCTACTATCTCTCCTATCTCTCCTCATTTC
1 TATCCCTCCTATCTCTCCT-TCTCTCATCACTTC
*
324557 -ATCCCTCCTATCTCTTCTTTCTCT
1 TATCCCTCCTATCTC-TCCTTCTCT
324581 TTGATGGCTA
Statistics
Matches: 48, Mismatches: 8, Indels: 4
0.80 0.13 0.07
Matches are distributed among these distances:
33 35 0.73
34 13 0.27
ACGTcount: A:0.12, C:0.41, G:0.00, T:0.47
Consensus pattern (33 bp):
TATCCCTCCTATCTCTCCTTCTCTCATCACTTC
Found at i:327202 original size:34 final size:34
Alignment explanation
Indices: 327164--327231 Score: 136
Period size: 34 Copynumber: 2.0 Consensus size: 34
327154 TAGGCAATAT
327164 TAACATAGTTTTCTCATTAGGATACATCATATTG
1 TAACATAGTTTTCTCATTAGGATACATCATATTG
327198 TAACATAGTTTTCTCATTAGGATACATCATATTG
1 TAACATAGTTTTCTCATTAGGATACATCATATTG
327232 ACGCTTTGGT
Statistics
Matches: 34, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
34 34 1.00
ACGTcount: A:0.32, C:0.15, G:0.12, T:0.41
Consensus pattern (34 bp):
TAACATAGTTTTCTCATTAGGATACATCATATTG
Found at i:328613 original size:476 final size:478
Alignment explanation
Indices: 327199--332301 Score: 6714
Period size: 476 Copynumber: 10.7 Consensus size: 478
327189 ATCATATTGT
* * *
327199 AACATAGTTTTCTCATTAGGATACATCATATTGACGCTTTGGTTTCACAAGAAAGGCTTTTTTCC
1 AACATAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCC
* * *
327264 CACCAATTTTTTGTAAAGTCTAAGTTCGTGCCTAAAATGAGACAAACAAGGATTCTAGTAAAGAT
66 CACCAATTTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAAAGAT
* *
327329 CTTCATTCATTTTGTGATTAGGCACTATAAACACATTCCCCTCCTAAGGATAAATGATATTGATG
131 CTTCATTCATTTTGTGATTAGGCACTATAAACACATTCCCCTCATTAGGATAAATGATATTGATG
* *
327394 ATTTTCTTTTTTGCATGGAAATCTTTTCTTTGCCCTATTTT-CTTTAGAATCAAAGTTCATCCCT
196 A-TTT-TTTTTAGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTTA-AATCAAAGTTCATACCT
* * * *
327458 TAAATAAGA-AAGGCATCAATTCTCATAACAGTCTCCATTTTTTTCAAGATTGGGAAGCC-AAAA
258 TAAATAAGACAA-GCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGACTGGGAAGCCAAAAA
* ** ** * * * *
327521 CACATTCCCTTGATTAGGATATGTGACATTGATGCTTTGGAATTGCAACAAATGCTTTTTTTTCC
322 CACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCC
** * *
327586 ACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAGCATGACAAACATGAATACTCATACTAATCC
387 ACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAAAACTCATACTAATCC
*
327651 TCATTCTTTTCAGGATTAGGCACCATA
452 CCATTCTTTTCAGGATTAGGCACCATA
* *
327678 AACATAGTCTTCTCATT-GAGATACATCA-ATTGATGCTTTGGTTTCGTAAGGAAGGCTTTTTTC
1 AACATAGTCTTCTCATTAG-GATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTC
** * * *
327741 CCATGAATTTTTTGTAAAGTCTATGTTCATGCCTCAATTGAGACAAACATGGATTCTAGTAATGA
65 CCACCAATTTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAAAGA
* * *
327806 TCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCC-AATTAGGA-AGAAAGATATTGA
130 TCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCCCCTCATTAGGATA-AATGATATTGA
*
327869 TGATTTTCTTTT-GCATGGAAATC-TTTCTTTGCCCTATTTTCCTTTAAATTAAAGTTCATACCT
194 TGATTTT-TTTTAGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTTAAATCAAAGTTCATACCT
* * * *
327932 TAAATAAGACAAGCAACGATTCTCGTAACAGTCTCCAATCTTTTCAAGACTAGAAAGCCAAAAAC
258 TAAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGACTGGGAAGCCAAAAAC
* * *
327997 ACATTCCCTTCATTTGGATACATGACACTGATGCTTTGGTGTCGCAAGAAATGCTTTTCTTTCCA
323 ACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCA
* *
328062 CCACTTTTT-ATAGAATCAAAGTTTGTCTCTTAAGTACGACAAACATGAATACTCATACTAATCC
388 CCA-TTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAAAACTCATACTAATCC
* * *
328126 CCATT-TTTTTAGGGTTAGGCATCATA
452 CCATTCTTTTCAGGATTAGGCACCATA
*
328152 AACATAGTCTTCTCATTAGGATACATCATATTGATGCTTTGCTTTCGCAAGAAAGGCTTTTTTCC
1 AACATAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCC
* *
328217 CACCAATTTTTTGAAAAGTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAAAAAT
66 CACCAATTTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAAAGAT
* *
328282 CTTCATTCATTTTGTGATTAGGCACTATAAACGCATTCCCCTCATTAGGATAAATGATATTG-TT
131 CTTCATTCATTTTGTGATTAGGCACTATAAACACATTCCCCTCATTAGGATAAATGATATTGATG
* * * * *
328346 ATTTTTTTTAGCATGGAAATCTTTTCTTTACACTCTTTTCCTTTAATTAAAAGTTCATACCTTAA
196 ATTTTTTTTAGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTTAAATCAAAGTTCATACCTTAA
* * * *
328411 ATAGGATAAGCATCGATTCTCGTAACAATCTCCATTCTTTTCAAGA-TAGGGAAGCCAAAAACAA
261 ATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGACT-GGGAAGCCAAAAACAC
*
328475 ATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCGAGAAAAGCTTTTCTTTCCACC
325 ATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACC
* * * * * * * * *
328540 GTTTTTGATAGAAT-AAAGTTTGTCTTTTAAATACAAGAAATAGGAAAACGCATACTGATCCCCG
390 ATTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAAAACTCATACTAATCCCCA
* * *
328604 TTCTTTTTAGGATTAGGCACTATG
455 TTCTTTTCAGGATTAGGCACCATA
*
328628 AACATAGTCATCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCC
1 AACATAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCC
* * *
328693 CACCAATTTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATAGAGTCTAGTAAAGAT
66 CACCAATTTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAAAGAT
* * * *
328758 CTTCATTCATTTTGTGATTTGGCACTATAAACACATTCTCCTCATTAGGATAAATCATATCGATG
131 CTTCATTCATTTTGTGATTAGGCACTATAAACACATTCCCCTCATTAGGATAAATGATATTGATG
* * *
328823 ATTTCTTCT-GCATGTAAATGC-TTTCTTTGCCCTATTTTCCTTTAAATCAAAGTTCATACACCT
196 ATTTTTTTTAGCATGGAAAT-CTTTTCTTTGCCCTATTTTCCTTTAAATCAAAGTTCAT--ACCT
* * * *
328886 TAAATAA-ACAAGTATCGATTCTCATAATAGTCTCCATTCTTTTCAAGACTGGGAAACCAAAAAC
258 TAAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGACTGGGAAGCCAAAAAC
* * * * * * *
328950 ACATTCCTTTTAATAGGATACATGATATTGATGCTTTGGTGTCACGAGAAAAGCTTTTCTTTCAA
323 ACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCA
* * * * *
329015 CCATTTTTGATAAAATTAAAGTTTGTCTCTTAAATGCGACAAACTTGAATAA-TCATACAAATCC
388 CCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAA-AACTCATACTAATCC
*
329079 CCCTTCTTTTCAGGATTAGGCACCATA
452 CCATTCTTTTCAGGATTAGGCACCATA
*
329106 AACATAGTCATCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCC
1 AACATAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCC
* * * * *
329171 CACCAATTTTTTGTAAAGTCTAAGTTCGTACCTTAAATGAGACAAACTTGAATTCTAGTAAAGAT
66 CACCAATTTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAAAGAT
* * *
329236 CTTCATTCATTTTGTGATTAGGCACTATAAACGCATTCCCTTCAATAGGATAAATGATATTGATG
131 CTTCATTCATTTTGTGATTAGGCACTATAAACACATTCCCCTCATTAGGATAAATGATATTGATG
* * * * * * * * *
329301 ATTTTCTTTAGCCTGGAAATCTTTTCTTTACCTTTTTTTCCTTTAATTAAAAGTTCATACCATAG
196 ATTTTTTTTAGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTTAAATCAAAGTTCATACCTTAA
* * * *
329366 ATAAGACAAGCATCGATTCTCGTAATAGTCTCCCTTCTTTCCAAGACTGGGAAGCCAAAAACAAA
261 ATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGACTGGGAAGCCAAAAACACA
* * * * *
329431 TTCCCTTCACTATGAAACATGACATTGATGCTTTGGTGTCACGAGAAAAGCTTTTCTTTCCACCA
326 TTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCA
* * * * *
329496 TTTTTGATAGAATCAAAGTTTGTCTCTTAAATATGCCAAACATGAATAGTCATGCTAATCCCCAT
391 TTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAAAACTCATACTAATCCCCAT
** *
329561 TCTTTTCAGGATTAGGCAATATT
456 TCTTTTCAGGATTAGGCACCATA
* * * *
329584 AACATAGTTTTCTCATTAGGATACATCATATTGATGCTATCGTTTTGCAAGAAAGGCTTTTTTCC
1 AACATAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCC
* * * * * *
329649 CACCAA-TTTTCGTATAGTCTAATTTCACGCCTCAAATGAGACAAACAAGGATTCTAGTAATGAT
66 CACCAATTTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAAAGAT
* * * * *
329713 CTTCATTCAATTTGTGATTATGCACCATAAACACATTCCCCTCCTAAGGATAAATGATATTGATG
131 CTTCATTCATTTTGTGATTAGGCACTATAAACACATTCCCCTCATTAGGATAAATGATATTGATG
* *
329778 ATTTTTCTTTTTGCATGGAAATCTTTTCTTTGCCCTATTTT-CTTTAAAATCGAAGTTCAT-CTC
196 A-TTTT-TTTTAGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTT-AAATCAAAGTTCATAC-C
* * * *
329841 TTAAAGAAGA-AAGGCATCAATTCTCGTAACAGTCTCCATTTTTTTCAAGATTGGGAAGCC-AAA
257 TTAAATAAGACAA-GCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGACTGGGAAGCCAAAA
* ** * * *
329904 ACACATTCCCTTTATTAGGATACATGACATTGATGCTTTGGAATTGCAATAAATGCTTTT-TTTC
321 ACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTC
* * ** * *
329968 AACCATTTTTGATAGAATTAAAGTTTGTCTCTTAAGCATGACAAACATGAATACTCATACTAATC
386 CACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAAAACTCATACTAATC
*
330033 CTCATTCTTTTCAGGATTAGGCACCATA
451 CCCATTCTTTTCAGGATTAGGCACCATA
330061 AACATAGTCTTCTCATTGAGG-TACATCA-ATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTC
1 AACATAGTCTTCTCATT-AGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTC
** * * * * *
330124 CCATGAATTTTTTGTAAAGTCTACGTTCGTGCCTCAATTAAGACAAACATGGATTCTAGTAATGA
65 CCACCAATTTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAAAGA
* * *
330189 TCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCC-AATTAGGATAAAAGATATTGAT
130 TCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCCCCTCATTAGGATAAATGATATTGAT
* *
330253 GATTTTCTTTT-GCGTGGAAATC-TTTCTTTGCCTTATTTTCCTTTAAATCAAAGTTCATACCTT
195 GATTTT-TTTTAGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTTAAATCAAAGTTCATACCTT
* * *
330316 AAAAAAGACAAGCATCGATTCTCGTAACAGTCTCCAATCTTTTCAAGACTAGGAAGCCAAAAACA
259 AAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGACTGGGAAGCCAAAAACA
* * * ** *
330381 CATTCCCTTCATTTGGATACACGACACTGATGCTTTGGTGTCATAAGAAATGCTTTTCTTTCCAC
324 CATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCAC
* * *
330446 CATTTTTTATATAATCAAAGTTTGTCTCTTAAGTACGACAAACATGAAAACTCATACTAATCCCC
389 CATTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAAAACTCATACTAATCCCC
*
330511 GTTCTTTTCAGGATTAGGCACCATA
454 ATTCTTTTCAGGATTAGGCACCATA
* *
330536 AACATAGTCTGCTCATTTGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCC
1 AACATAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCC
* * *
330601 CACCAATTTTTTGTAAAGTCTAAGTGCATGCCTAAAATGAGACAACCATGGATTCTAGTAAAGAT
66 CACCAATTTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAAAGAT
* * *
330666 CTTCTTTCATTTTGTGATTAGGTACTATAAACACATTCCCCTCATTAGGATAAATAATATTGAT-
131 CTTCATTCATTTTGTGATTAGGCACTATAAACACATTCCCCTCATTAGGATAAATGATATTGATG
* * * * *
330730 ATTTTTTTTAGCATGGAAATCTTTTC-TTACCCTCTTTTCCTTTTATTAAAAGTTCATACCTTAA
196 ATTTTTTTTAGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTTAAATCAAAGTTCATACCTTAA
* * * * *
330794 ATAGGATAAGCATCGATTCTCGTAACAATCACTATTCTTTTCAAGA-TAAGGGAAGCCAAAAACA
261 ATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGACT--GGGAAGCCAAAAACA
* * *
330858 AATTCCCTTCATTAGGGTACATGACATTGATGCTTTGGTGTCGCGAGAAAAGCTTTTCTTTCCAC
324 CATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCAC
** * * * * * *
330923 TGTTTTTGATGGAAT-AAAATTTGTCT-TCTAAATACAACAAACAAGAAAACGCATACAAATCCC
389 CATTTTTGATAGAATCAAAGTTTGTCTCT-TAAATACGACAAACATGAAAACTCATACTAATCCC
*
330986 CCTTCTTTTCAGGATTAGGCACCATA
453 CATTCTTTTCAGGATTAGGCACCATA
* * *
331012 AACATAGTCATCTTATTAGGATACATCATATTGATGCTTTGATTTCGCAAGAAAGGCTTTTTTCC
1 AACATAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCC
* * *
331077 CACGAATTTTTTTGTAAAGTCTAAGTTCGTGCCTGAAATGAGACAAACATGGATTCTAGTAAAGA
66 CACCAA-TTTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAAAGA
* * *
331142 TCTTCATTGATTTTGTGATTAGGCACTATAAACACATTCCTCTCAATAGGATAAATGATATTGAT
130 TCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCCCCTCATTAGGATAAATGATATTGAT
* * * * * * *
331207 GATTTTCTTTAGCCTGGAAATCTTTTCTTTACCCTTTTTTCCTTTAATTAAAAGTTCATACCATA
195 GATTTTTTTTAGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTTAAATCAAAGTTCATACCTTA
* * * *
331272 GATAAGACAAACATCAATTCTCGTAACAGTCT-CAGTTCTTTCCAAGACTGGGAAGCCAAAAACA
260 AATAAGACAAGCATCGATTCTCGTAACAGTCTCCA-TTCTTTTCAAGACTGGGAAGCCAAAAACA
* * * * *
331336 AATTCTCTTCATTAGGATACATAACATTGATGCGTTGGTGTCACAAGAAAAGCTTTTCTTTCCAC
324 CATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCAC
* * *
331401 C-TTTTTGATAGAAT-AAAGTTTGACCCTTAAATACGACAAACAAGAAAA-TGCATACTAATCCC
389 CATTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAAAACT-CATACTAATCCC
* *
331463 CATTCTTTTTAGGATTAGGCACTATA
453 CATTCTTTTCAGGATTAGGCACCATA
* * * *
331489 AACATAGTTTTCTCATTAGGATACATCATATTGATGCTATGGTTTTGCAAGAAAGGCTTTTTTCT
1 AACATAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCC
* *
331554 CACCAA-TTTTTGTATAGTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAATGAT
66 CACCAATTTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAAAGAT
* * * *
331618 CTTCATTCATTTTGTGATTATGCACCATAAACACATTCCCCTCCTAAGGATAAATGATATTGATG
131 CTTCATTCATTTTGTGATTAGGCACTATAAACACATTCCCCTCATTAGGATAAATGATATTGATG
** *
331683 ATTTTTTTTTCCATGGAAATCTTTTCTTTGCCCTATTTT-CTTTAAAATCAAAGTTCATCCCTTA
196 ATTTTTTTTAGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTT-AAATCAAAGTTCATACCTTA
* * *
331747 AATAAGA-AAGGCATCAATTCTCGTAACTGTCTCCATTCTTTTCAAGATTGGG-AGACC-AAAAC
260 AATAAGACAA-GCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGACTGGGAAG-CCAAAAAC
* * * *
331809 ACATTCCCTTGATTAGGATAAATGACATTGATACTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCA
323 ACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCA
* * * * * *
331874 CCGTTCTTGATAAAATGAAAGTTTGTCTCTTAAATATGACAAACATGAATACTCATACTAATCCC
388 CCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAAAACTCATACTAATCCC
*
331939 CATTCTTTTTAGGATTAGGCACCATA
453 CATTCTTTTCAGGATTAGGCACCATA
* * * **
331965 AACGTA-TCTTCTCATTAGGATACATGATATTG-TAGCTTTGGTTTCGCAGGAAAGGCTTTCGTC
1 AACATAGTCTTCTCATTAGGATACATCATATTGAT-GCTTTGGTTTCGCAAGAAAGGCTTTTTTC
** * * * *
332028 CTGCCAA-TTTTAGTAAACTCTAAGTTCATGCCTCAAATGAGACAAATCA-GGATT-TTGTAATG
65 CCACCAATTTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGACAAA-CATGGATTCTAGTAAAG
** * *
332090 ATCTTTGTTCATTTTGTGATGAGGCACTATAAA-AGCATTCTCCC-CACTAGGATAAAT-ATATT
129 ATCTTCATTCATTTTGTGATTAGGCACTATAAACA-CATTC-CCCTCATTAGGATAAATGATATT
* *
332152 GATGATTTTCTTTTA-CATAGAAATCCTTTC-TTGACCCTATTTTCCTTTAAATCAAAGTTCATA
192 GATGATTTT-TTTTAGCATGGAAATCTTTTCTTTG-CCCTATTTTCCTTTAAATCAAAGTTCATA
** * ** *
332215 CCTTAAATAAGGTAAGCATCGATTCTTGTAATGGTCTCTATTCTTTTCAAGACTGGGAAG-CAAA
255 CCTTAAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGACTGGGAAGCCAAA
332279 AATCACATTCCCTTCATTAGGAT
320 AA-CACATTCCCTTCATTAGGAT
332302 TGTCTCTTAA
Statistics
Matches: 4056, Mismatches: 496, Indels: 149
0.86 0.11 0.03
Matches are distributed among these distances:
472 4 0.00
473 183 0.05
474 353 0.09
475 772 0.19
476 903 0.22
477 813 0.20
478 803 0.20
479 224 0.06
480 1 0.00
ACGTcount: A:0.31, C:0.19, G:0.14, T:0.36
Consensus pattern (478 bp):
AACATAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCC
CACCAATTTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAAAGAT
CTTCATTCATTTTGTGATTAGGCACTATAAACACATTCCCCTCATTAGGATAAATGATATTGATG
ATTTTTTTTAGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTTAAATCAAAGTTCATACCTTAA
ATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGACTGGGAAGCCAAAAACACA
TTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCA
TTTTTGATAGAATCAAAGTTTGTCTCTTAAATACGACAAACATGAAAACTCATACTAATCCCCAT
TCTTTTCAGGATTAGGCACCATA
Found at i:328815 original size:159 final size:157
Alignment explanation
Indices: 327210--332155 Score: 1444
Period size: 159 Copynumber: 31.2 Consensus size: 157
327200 ACATAGTTTT
* * * *
327210 CTCATTAGGATACATCATATTGACGCTTTGGTTTCACAAGAAAGGCTTTTTTCCCACCAATTTTT
1 CTCATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTTCCACC-ATTTTT
* * *
327275 TGTAAAGTCTAAGTTCGTGCCTAAAATGAGACAAACA-AGGATTCTAGTAAAGATCTTCATTCAT
65 TGTAAA-TCTAAGTTCATGCCTTAAATGAGACAAACATA-GATTCTAGTAAAGATCTCCATTC-T
* *
327339 TTT-GTGATTAGGCACTATAAACACATTCCC
127 TTTCGTGATTAGGCACCATAAACACATTCTC
* * * * ** * * * *
327369 CTCCTAAGGATAAATGATATTGATGATTTTCTTTTTTGCATGGAAA-TCTTTTCTTTGCC-CTAT
1 CTCATTAGGATACATGATATTGATG-CTTT-GGTTTCGCA-AGAAAGGCTTTT-TTT-CCACCAT
* * * *
327432 TTTCTT-TAGAATCAAAGTTCATCCCTTAAATAAGA-AAGGCATCA-ATTCTCA-TAACAG-TCT
61 TTT-TTGTA-AATCTAAGTTCATGCCTTAAATGAGACAA-ACAT-AGATTCT-AGTAA-AGATCT
* ** * *
327492 CCATTTTTTTCAAGATTGGGAAGCCA-AAACACATTC-C
120 CCATTCTTTTCGTGATTAGGCA-CCATAAACACATTCTC
* ** * * * *
327529 CTTGATTAGGATATGTGACATTGATGCTTTGGAATT-GCAACAAATGCTTTTTTTTCCACCA-TT
1 C-TCATTAGGATACATGATATTGATGCTTTGG-TTTCGCAAGAAAGGC-TTTTTTTCCACCATTT
* * *
327592 TTTGATAGAATCAAAGTT--TGTCTCTT-AA-GCATGACAAACAT-GAATACTCA-TACTA-ATC
63 TTTG-TA-AATCTAAGTTCATG-C-CTTAAATG-A-GACAAACATAG-ATTCT-AGTA-AAGATC
* * *
327650 -CTCATTCTTTTCAG-GATTAGGCACCATAAACATAGTCTT
119 TC-CATTCTTTTC-GTGATTAGGCACCATAAACACATTCTC
* * * * **
327689 CTCATT-GAGATACATCA-ATTGATGCTTTGGTTTCGTAAGGAAGGCTTTTTTCCCATGAATTTT
1 CTCATTAG-GATACATGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTTCCA-CCATTTT
* * * * * *
327752 TTGTAAAGTCTATGTTCATGCCTCAATTGAGACAAACATGGATTCTAGTAATGATCTTCATTCAT
64 TTGTAAA-TCTAAGTTCATGCCTTAAATGAGACAAACATAGATTCTAGTAAAGATCTCCATTC-T
*
327817 TTT-GTGATTAGGCACTATAAACACATTCTC
127 TTTCGTGATTAGGCACCATAAACACATTCTC
* * * * ** * * * * *
327847 C-AATTAGGA-AGAAAGATATTGATGATTTTCTTTTGCATGGAAA-TCTTTCTTTGCC-CTATTT
1 CTCATTAGGATA-CATGATATTGATGCTTTGGTTTCGCA-AGAAAGGCTTT-TTTTCCACCATTT
* * * *
327908 TCCTT-TAAAT-TAAAGTTCATACCTTAAATAAGACAAGCA-ACGATTCTCGTAACAG-TCTCCA
63 T--TTGTAAATCT-AAGTTCATGCCTTAAATGAGACAAACATA-GATTCTAGTAA-AGATCTCCA
* ** * ** *
327969 ATCTTTTCAAGACTAGAAAGCCAAAAACACATTC-C
123 TTCTTTTCGTGATTAGGCA-CCATAAACACATTCTC
* * * * * *
328004 CTTCATTTGGATACATGACACTGATGCTTTGGTGTCGCAAGAAATGCTTTTCTTTCCACCACTTT
1 C-TCATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTT-TTTCCACCATTTT
* * * * * *
328069 TTATAGAATCAAAGTT--TGTCTCTTAAGT-ACGACAAACAT-GAATACTCA-TACTA-ATCCCC
64 TTGTA-AATCTAAGTTCATG-C-CTTAAATGA-GACAAACATAG-ATTCT-AGTA-AAGATCTCC
* * * * * * *
328128 ATTTTTTTAG-GGTTAGGCATCATAAACATAGTCTT
122 ATTCTTTTCGTGATTAGGCACCATAAACACATTCTC
* * *
328163 CTCATTAGGATACATCATATTGATGCTTTGCTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTT
1 CTCATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTTCCACC-ATTTTT
* * * * *
328228 TGAAAAGTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAAAAATCTTCATTCATT
65 TGTAAA-TCTAAGTTCATGCCTTAAATGAGACAAACATAGATTCTAGTAAAGATCTCCATTC-TT
* * *
328293 TT-GTGATTAGGCACTATAAACGCATTCCC
128 TTCGTGATTAGGCACCATAAACACATTCTC
* ** ** * * * *
328322 CTCATTAGGATAAATGATATTG-TTATTTTTTTTAGCATGGAAA-TCTTTTCTTTACACTC-TTT
1 CTCATTAGGATACATGATATTGATGCTTTGGTTTCGCA-AGAAAGGCTTTT-TTTCCAC-CATTT
* ** * * * * *
328384 TCCTT-TAATTAAAAGTTCATACCTTAAAT-AGGATAAGCATCGATTCTCGTAACA-ATCTCCAT
63 T--TTGTAAATCTAAGTTCATGCCTTAAATGA-GACAAACATAGATTCTAGTAA-AGATCTCCAT
** * * *
328446 TCTTTTCAAGA-TAGGGAAGCCAAAAACAAATTC-C
124 TCTTTTCGTGATTA-GGCA-CCATAAACACATTCTC
* * * * *
328480 CTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCGAGAAAAGCTTTTCTTTCCACC-GTTT
1 C-TCATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTT-TTTCCACCATTTT
* * * ** * ** *
328544 TTGATAGAAT-AAAGTT--TGTCTTTTAAAT---ACAAGAAATAGGAAAACGCA-TACTGATCCC
64 TTG-TA-AATCTAAGTTCATG-C-CTTAAATGAGACAA-ACATA-G-ATTC-TAGTAAAGATCTC
* * * * * *
328602 CGTTCTTTTTAG-GATTAGGCACTATGAACATAGTCAT-
121 CATTC-TTTTCGTGATTAGGCACCATAAACACATTC-TC
* *
328639 CTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTT
1 CTCATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTTCCACC-ATTTTT
* * * *
328704 TGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATAGAGTCTAGTAAAGATCTTCATTCATT
65 TGTAAA-TCTAAGTTCATGCCTTAAATGAGACAAACATAGATTCTAGTAAAGATCTCCATTC-TT
* *
328769 TT-GTGATTTGGCACTATAAACACATTCTC
128 TTCGTGATTAGGCACCATAAACACATTCTC
* * * * * * * * *
328798 CTCATTAGGATAAATCATATCGATGATTT--CTTCTGCATGTAAATGCTTTCTTTGCC-CTATTT
1 CTCATTAGGATACATGATATTGATGCTTTGGTTTC-GCAAG-AAAGGCTTT-TTTTCCACCATTT
* * * ** *
328860 TCCTT-TAAATCAAAGTTCATACACCTTAAAT-AAACAAGTATCGATTCTCA-TAATAG-TCTCC
63 T--TTGTAAATCTAAGTTCAT--GCCTTAAATGAGACAAACATAGATTCT-AGTAA-AGATCTCC
** * * * *
328921 ATTCTTTTCAAGACTGGGAAACCAAAAACACATTC-C
122 ATTCTTTTCGTGATTAGG-CACCATAAACACATTCTC
* * * * * * * *
328957 TTTTAATAGGATACATGATATTGATGCTTTGGTGTCACGAGAAAAGCTTTTCTTTCAACCA-TTT
1 -CTCATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTT-TTTCCACCATTTT
* * *
329021 TTGATAAAAT-TAAAGTT--TGTCTCTTAAATGCGACAAAC-TTGAATAATC-A-TACAA-ATCC
64 TTG-T-AAATCT-AAGTTCATG-C-CTTAAATGAGACAAACATAG-AT--TCTAGTA-AAGATCT
* * *
329079 CCCTTCTTTTCAG-GATTAGGCACCATAAACATAGTCAT-
120 CCATTCTTTTC-GTGATTAGGCACCATAAACACATTC-TC
* *
329117 CTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTT
1 CTCATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTTCCACC-ATTTTT
* * * *
329182 TGTAAAGTCTAAGTTCGTACCTTAAATGAGACAAAC-TTGAATTCTAGTAAAGATCTTCATTCAT
65 TGTAAA-TCTAAGTTCATGCCTTAAATGAGACAAACATAG-ATTCTAGTAAAGATCTCCATTC-T
* *
329246 TTT-GTGATTAGGCACTATAAACGCATTC-C
127 TTTCGTGATTAGGCACCATAAACACATTCTC
* * * ** * ** * *
329275 CTTCAATAGGATAAATGATATTGATGATTTTCTTTAGCCTGGAAA-TCTTTTCTTT--ACCTTTT
1 C-TCATTAGGATACATGATATTGATGCTTTGGTTTCG-CAAGAAAGGCTTTT-TTTCCACCATTT
* * * * * * * * * *
329337 TTTCCTTTAAT-TAAAAGTTCATACCATAGATAAGACAAGCATCGATTCTCGTAATAG-TCTCCC
63 TTT--GTAAATCT--AAGTTCATGCCTTAAATGAGACAAACATAGATTCTAGTAA-AGATCTCCA
* ** * * * * *
329400 TTCTTTCCAAGACTGGGAAGCCAAAAACAAATTC-C
123 TTCTTTTCGTGATTAGGCA-CCATAAACACATTCTC
* * * * * * * *
329435 CTTCACTATGAAACATGACATTGATGCTTTGGTGTCACGAGAAAAGCTTTTCTTTCCACCA-TTT
1 C-TCATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTT-TTTCCACCATTTT
* * * * * *
329499 TTGATAGAATCAAAGTT--TGTCTCTTAAAT-ATGCCAAACAT-GA--ATAGTCATGCTAATCCC
64 TTG-TA-AATCTAAGTTCATG-C-CTTAAATGA-GACAAACATAGATTCTAGTAAAG---ATCTC
** * * *
329558 CATTCTTTTCAG-GATTAGGCAATATTAACATAGTT-TT
121 CATTCTTTTC-GTGATTAGGCACCATAAACACA-TTCTC
* * * * * * *
329595 CTCATTAGGATACATCATATTGATGCTATCGTTTTGCAAGAAAGGCTTTTTTCCCACCAATTTTC
1 CTCATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTTCCACCATTTTTT
* * * * * * *
329660 GTATAGTCTAATTTCACGCCTCAAATGAGACAAACA-AGGATTCTAGTAATGATCTTCATTCAAT
66 GTA-AATCTAAGTTCATGCCTTAAATGAGACAAACATA-GATTCTAGTAAAGATCTCCATTC-TT
* *
329724 TT-GTGATTATGCACCATAAACACATTCCC
128 TTCGTGATTAGGCACCATAAACACATTCTC
* * * * ** * * * *
329753 CTCCTAAGGATAAATGATATTGATGATTTTTCTTTTTGCATGGAAA-TCTTTTCTTTGCC-CTAT
1 CTCATTAGGATACATGATATTGATG--CTTTGGTTTCGCA-AGAAAGGCTTTT-TTT-CCACCAT
* * *
329816 TTTCTT-TAAAATCGAAGTTCAT-CTCTTAAA-GAAGA-AAGGCATCA-ATTCTCGTAACAG-TC
61 TTT-TTGT-AAATCTAAGTTCATGC-CTTAAATG-AGACAA-ACAT-AGATTCTAGTAA-AGATC
* ** * *
329875 TCCATTTTTTTCAAGATTGGGAAGCCA-AAACACATTC-C
119 TCCATTCTTTTCGTGATTAGGCA-CCATAAACACATTCTC
* * * * * *
329913 CTTTATTAGGATACATGACATTGATGCTTTGGAATT-GCAATAAATGCTTTTTTTCAACCA-TTT
1 C-TCATTAGGATACATGATATTGATGCTTTGG-TTTCGCAAGAAAGGCTTTTTTTCCACCATTTT
* *
329976 TTGATAGAAT-TAAAGTT--TGTCTCTT-AA-GCATGACAAACAT-GAATACTCA-TACTA-ATC
64 TTG-TA-AATCT-AAGTTCATG-C-CTTAAATG-A-GACAAACATAG-ATTCT-AGTA-AAGATC
* * *
330033 -CTCATTCTTTTCAG-GATTAGGCACCATAAACATAGTCTT
119 TC-CATTCTTTTC-GTGATTAGGCACCATAAACACATTCTC
* * **
330072 CTCATTGAGG-TACATCA-ATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCATGAATTTT
1 CTCATT-AGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTTCCA-CCATTTT
* * * * * * * *
330135 TTGTAAAGTCTACGTTCGTGCCTCAATTAAGACAAACATGGATTCTAGTAATGATCTTCATTCAT
64 TTGTAAA-TCTAAGTTCATGCCTTAAATGAGACAAACATAGATTCTAGTAAAGATCTCCATTC-T
*
330200 TTT-GTGATTAGGCACTATAAACACATTCTC
127 TTTCGTGATTAGGCACCATAAACACATTCTC
* * * * ** * ** * * **
330230 C-AATTAGGATAAAAGATATTGATGATTTTCTTTTGCGTGGAAA-TCTTTCTTTGCC-TTATTTT
1 CTCATTAGGATACATGATATTGATGCTTTGGTTTCGC-AAGAAAGGCTTT-TTTTCCACCATTTT
* * ** * * * *
330292 CCTT-TAAATCAAAGTTCATACCTTAAAAAAGACAAGCATCGATTCTCGTAACAG-TCTCCAATC
64 --TTGTAAATCTAAGTTCATGCCTTAAATGAGACAAACATAGATTCTAGTAA-AGATCTCCATTC
** * * *
330355 TTTTCAAGACTAGGAAGCCAAAAACACATTC-C
126 TTTTCGTGATTAGGCA-CCATAAACACATTCTC
* * * * * ** *
330387 CTTCATTTGGATACACGACACTGATGCTTTGGTGTCATAAGAAATGCTTTTCTTTCCACCATTTT
1 C-TCATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTT-TTTCCACCATTTT
* * * ** * *
330452 TTATATAATCAAAGTT--TGTCTCTTAAGT-ACGACAAACAT-GAAAACTCA-TACTA-ATCCCC
64 TTGTA-AATCTAAGTTCATG-C-CTTAAATGA-GACAAACATAG-ATTCT-AGTA-AAGATCTCC
* * * *
330511 GTTCTTTTCAG-GATTAGGCACCATAAACATAGTCTG
122 ATTCTTTTC-GTGATTAGGCACCATAAACACATTCTC
* * *
330547 CTCATTTGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCCCACCAATTTTT
1 CTCATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTTCCACC-ATTTTT
* * * * * *
330612 TGTAAAGTCTAAGTGCATGCCTAAAATGAGACAACCATGGATTCTAGTAAAGATCTTCTTTCATT
65 TGTAAA-TCTAAGTTCATGCCTTAAATGAGACAAACATAGATTCTAGTAAAGATCTCCATTC-TT
* * *
330677 TT-GTGATTAGGTACTATAAACACATTCCC
128 TTCGTGATTAGGCACCATAAACACATTCTC
* * * ** * * * *
330706 CTCATTAGGATAAATAATATTGAT-ATTTTTTTTAGCATGGAAA-TCTTTTCTTACC-CTC-TTT
1 CTCATTAGGATACATGATATTGATGCTTTGGTTTCGCA-AGAAAGGCTTTT-TTTCCAC-CATTT
* * ** * * * * * * *
330767 TCCTT-TTATTAAAAGTTCATACCTTAAAT-AGGATAAGCATCGATTCTCGTAACA-ATCACTAT
63 T--TTGTAAATCTAAGTTCATGCCTTAAATGA-GACAAACATAGATTCTAGTAA-AGATCTCCAT
** * * * *
330829 TCTTTTCAAGATAAGGGAAGCCAAAAACAAATTC-C
124 TCTTTTCGTGATTA-GGCA-CCATAAACACATTCTC
* * * * *
330864 CTTCATTAGGGTACATGACATTGATGCTTTGGTGTCGCGAGAAAAGCTTTTCTTTCCA-C-TGTT
1 C-TCATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTT-TTTCCACCAT-TT
* * * * * ** * *
330927 TTTGATGGAAT-AAAATT--TGTCTTCTAAAT-ACAACAAACA-AGAAAACGCA-TACAA-ATCC
63 TTTG-T-AAATCTAAGTTCATG-CCT-TAAATGA-GACAAACATAG-ATTC-TAGTA-AAGATCT
* * *
330985 CCCTTCTTTTCAG-GATTAGGCACCATAAACATAGTCAT-
120 CCATTCTTTTC-GTGATTAGGCACCATAAACACATTC-TC
* * * * *
331023 CTTATTAGGATACATCATATTGATGCTTTGATTTCGCAAGAAAGGCTTTTTTCCCACGAATTTTT
1 CTCATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTTCCAC-CA-TTTT
* * * * *
331088 TTGTAAAGTCTAAGTTCGTGCCTGAAATGAGACAAACATGGATTCTAGTAAAGATCTTCATTGAT
64 TTGTAAA-TCTAAGTTCATGCCTTAAATGAGACAAACATAGATTCTAGTAAAGATCTCCATT-CT
*
331153 TTT-GTGATTAGGCACTATAAACACATTC-C
127 TTTCGTGATTAGGCACCATAAACACATTCTC
* * * ** * ** * * *
331182 TCTCAATAGGATAAATGATATTGATGATTTTCTTTAGCCTGGAAA-TCTTTTCTTTAC-CCTTTT
1 -CTCATTAGGATACATGATATTGATGCTTTGGTTTCG-CAAGAAAGGCTTTT-TTTCCACCATTT
* * ** * * * * *
331245 TTCCTTTAATTAAAAGTTCATACCATAGATAAGACAAACATCA-ATTCTCGTAACAG-TCT-CAG
63 TT--TGTAAATCTAAGTTCATGCCTTAAATGAGACAAACAT-AGATTCTAGTAA-AGATCTCCA-
* ** * * * * *
331307 TTCTTTCCAAGACTGGGAAGCCAAAAACAAATTCTC
123 TTCTTTTCGTGATTAGGCA-CCATAAACACATTCTC
* * * * * * *
331343 TTCATTAGGATACATAACATTGATGCGTTGGTGTCACAAGAAAAGCTTTTCTTTCCACC--TTTT
1 CTCATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTT-TTTCCACCATTTTT
* * * *
331406 TGATAGAAT-AAAGTT--TGACCCTTAAAT-ACGACAAACA-AGAAAATGC-A-TACTA-ATCCC
65 TG-TA-AATCTAAGTTCATG--CCTTAAATGA-GACAAACATAG---ATTCTAGTA-AAGATCTC
* * * *
331463 CATTCTTTTTAG-GATTAGGCACTATAAACATAGTT-TT
121 CATTC-TTTTCGTGATTAGGCACCATAAACACA-TTCTC
* * * *
331500 CTCATTAGGATACATCATATTGATGCTATGGTTTTGCAAGAAAGGC-TTTTTTCTCACCAATTTT
1 CTCATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTTC-CACCATTTTT
* * * * *
331564 TGTATAGTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATT
65 TGTA-AATCTAAGTTCATGCCTTAAATGAGACAAACATAGATTCTAGTAAAGATCTCCATTC-TT
* *
331629 TT-GTGATTATGCACCATAAACACATTCCC
128 TTCGTGATTAGGCACCATAAACACATTCTC
* * * * ** * * *
331658 CTCCTAAGGATAAATGATATTGATGATTTTTTTTTC-CATGGAAA-TCTTTTCTTTGCC-CTATT
1 CTCATTAGGATACATGATATTGATG-CTTTGGTTTCGCA-AGAAAGGCTTTT-TTT-CCACCATT
* * * * * *
331720 TTCTT-TAAAATCAAAGTTCATCCCTTAAATAAGA-AAGGCATCA-ATTCTCGTAACTG-TCTCC
62 TT-TTGT-AAATCTAAGTTCATGCCTTAAATGAGACAA-ACAT-AGATTCTAGTAA-AGATCTCC
** * *
331781 ATTCTTTTCAAGATTGGGAGACCA-AAACACATTC-C
122 ATTCTTTTCGTGATTAGG-CACCATAAACACATTCTC
* * * * * *
331816 CTTGATTAGGATAAATGACATTGATACTTTGGTGTCGCAAGAGAA-GCTTTTCTTTCCACC-GTT
1 C-TCATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGA-AAGGCTTTT-TTTCCACCATTT
* ** * * *
331879 CTTGATAAAATGAAAGTT--TGTCTCTTAAAT-ATGACAAACAT-GAATACTCA-TACTA-ATCC
63 TTTG-T-AAATCTAAGTTCATG-C-CTTAAATGA-GACAAACATAG-ATTCT-AGTA-AAGATCT
* ** *
331938 CCATTCTTTTTAG-GATTAGGCACCATAAACGTA-TCTT
120 CCATTC-TTTTCGTGATTAGGCACCATAAACACATTCTC
* ** * *
331975 CTCATTAGGATACATGATATTG-TAGCTTTGGTTTCGCAGGAAAGGC-TTTCGTCCTGCCAATTT
1 CTCATTAGGATACATGATATTGAT-GCTTTGGTTTCGCAAGAAAGGCTTTTTTTCC-ACCATTTT
* * * * * ***
332038 TAGTAAACTCTAAGTTCATGCCTCAAATGAGACAAATCA-GGATT-TTGTAATGATCTTTGTTCA
64 TTGTAAA-TCTAAGTTCATGCCTTAAATGAGACAAA-CATAGATTCTAGTAAAGATCTCCATTC-
* *
332101 TTTT-GTGATGAGGCACTATAAA-AGCATTCTC
126 TTTTCGTGATTAGGCACCATAAACA-CATTCTC
* * *
332132 CCCACTAGGATAAAT-ATATTGATG
1 CTCATTAGGATACATGATATTGATG
332156 ATTTTCTTTT
Statistics
Matches: 3465, Mismatches: 899, Indels: 849
0.66 0.17 0.16
Matches are distributed among these distances:
155 5 0.00
156 80 0.02
157 391 0.11
158 943 0.27
159 1160 0.33
160 613 0.18
161 232 0.07
162 37 0.01
163 4 0.00
ACGTcount: A:0.31, C:0.19, G:0.14, T:0.36
Consensus pattern (157 bp):
CTCATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTTCCACCATTTTTT
GTAAATCTAAGTTCATGCCTTAAATGAGACAAACATAGATTCTAGTAAAGATCTCCATTCTTTTC
GTGATTAGGCACCATAAACACATTCTC
Found at i:332704 original size:407 final size:405
Alignment explanation
Indices: 331896--332707 Score: 994
Period size: 407 Copynumber: 2.0 Consensus size: 405
331886 AAATGAAAGT
* * *
331896 TTGTCTCTTAAATATGACAAACATGAATACTCATACTAATCCCCATTCTTTTTAGGATTAGGCAC
1 TTGTCTCTTAAATATGACAAACAAGAATACTCATACTAATCCACATTCTTTTTAGGATTACGCAC
* ** *
331961 CATAAACGTATCTTCTCATTAGGATACATGATATTGTAGCTTTGGTTTCGCAGGAAAGGCTTTCG
66 CATAAACATATCTTCTCATTAGGATACACAATATTGTAGCTTTGGTTTCGCAAGAAAGGCTTTCG
** * **
332026 TCCTGCCAATTTTAGTAAACTCTAAGTTCATGCCTCAAATGAGACAAATCAGGATTTTGTAATGA
131 TCCCACCAATTTTAGCAAACTCTAAGTTCATGCCTCAAATGAGACAAATCAGGATTTACTAATGA
* *
332091 TCTTTGTTCATTTTGTGATGAGGCACTATAAAAGCATTCTCCCCACTAGGATAAATATATTGATG
196 TCATTATTCATTTTGTGATGAGGCACTATAAAAGCATTCTCCCCACTAGGATAAATATATTGATG
* * *
332156 ATTTTCTTTTACATAGAAATCCTTTCTTGACCCTATTTTCCTTTAAATCAAAGTTCATACCTTAA
261 ATTTTCTTTTACATAGAAATCCTTTCTTGACCATATTTTCATTAAAATCAAAGTTCATACCTTAA
** ** ** * *
332221 ATAAGGTAAGCATCGATTCTTGTAATGGTCTCTATTCTTTTCAAGACTGGGAAGCAAAAATCACA
326 ATAAGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGACTAGGAAGCAAAAATCACA
332286 TTCCCTTCATTAGGA
391 TTCCCTTCATTAGGA
* *
332301 TTGTCTCTTAAATGTGACAAACAAGAATACTCATACTAATCCACGTTCTTTTTAGGATTTACGCA
1 TTGTCTCTTAAATATGACAAACAAGAATACTCATACTAATCCACATTCTTTTTAGGA-TTACGCA
** *
332366 TGATAAACATAGTCTTCTCATTAGGATACACAATATTG-ATGTTTTGGTTTCGCAAGAAA-GCAT
65 CCATAAACATA-TCTTCTCATTAGGATACACAATATTGTA-GCTTTGGTTTCGCAAGAAAGGC-T
* * * * *
332429 TT-TTCCCACCAATATTT-GCAAAGTGTAAGTTCGTGCCTCAATTGAGACAAAT-ATGGATTCTA
127 TTCGTCCCACCAAT-TTTAGCAAACTCTAAGTTCATGCCTCAAATGAGACAAATCA-GGATT-TA
* * * * *
332491 CTAATGATCATTATTCATTTTGTGATTAGGCATTATAAACA-CATT-TCTCCTATTGGGATAAAT
189 CTAATGATCATTATTCATTTTGTGATGAGGCACTATAAA-AGCATTCTC-CCCACTAGGATAAAT
* * * * *
332554 GATATTGATGATTTTCTTTTACTTGGAAATCTTTTCTTTG-CCATATTTTTATTAAAATCAAATT
252 -ATATTGATGATTTTCTTTTACATAGAAATCCTTTC-TTGACCATATTTTCATTAAAATCAAAGT
* * * *
332618 TCATCCCTTAAATAAGACAAGCATCGTTTCTCATAACATTCTCCATTCTTTTCAAGATTAGGAAG
315 TCATACCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGACTAGGAAG
* * *
332683 CTAAAA-CACGTTCCTTTCATTAGGA
380 CAAAAATCACATTCCCTTCATTAGGA
332708 CACATGATAT
Statistics
Matches: 344, Mismatches: 52, Indels: 20
0.83 0.12 0.05
Matches are distributed among these distances:
405 54 0.16
406 62 0.18
407 115 0.33
408 110 0.32
409 3 0.01
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (405 bp):
TTGTCTCTTAAATATGACAAACAAGAATACTCATACTAATCCACATTCTTTTTAGGATTACGCAC
CATAAACATATCTTCTCATTAGGATACACAATATTGTAGCTTTGGTTTCGCAAGAAAGGCTTTCG
TCCCACCAATTTTAGCAAACTCTAAGTTCATGCCTCAAATGAGACAAATCAGGATTTACTAATGA
TCATTATTCATTTTGTGATGAGGCACTATAAAAGCATTCTCCCCACTAGGATAAATATATTGATG
ATTTTCTTTTACATAGAAATCCTTTCTTGACCATATTTTCATTAAAATCAAAGTTCATACCTTAA
ATAAGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGACTAGGAAGCAAAAATCACA
TTCCCTTCATTAGGA
Found at i:333666 original size:476 final size:474
Alignment explanation
Indices: 332301--334175 Score: 2269
Period size: 476 Copynumber: 3.9 Consensus size: 474
332291 TTCATTAGGA
** *
332301 TTGTCTCTTAAATGTGACAAACAAGAATACTCATACTAATCCACGTTCTTTTTAGGATTTACGCA
1 TTGTCTCTTAAATACGACAAACAAGAATACTCATACTAATCCA-GTTCTTTTTAGGA-TTAGGCA
** *
332366 TGATAAACATAGTCTTCTCATTAGGATACA-CAATATTGATGTTTTGGTTTCGCAAGAAA-GCAT
64 CCATAAACATAGTCTTCTCATTAGGATACATC-ATATTGATGCTTTGGTTTCGCAAGAAAGGCAT
* * * * * *
332429 TTTTCCCACCAATATTTGCAAAGTGTAAGTTCGTGCCTCAATTGAGACAAATATGGATTCTACTA
128 TTTTCCCACCAATTTTTGTAAAGTTTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTA
* *
332494 ATGATCATT-ATTCATTTTGTGATTAGGCATTATAAACACATTTCTCCTATTGGGATAAATGATA
193 ATGATC-TTCATTCATTTTGTGATTAGGCACTATAAACACA-TTCTCCTATTAGGATAAATGATA
* * * ** * * *
332558 TTGATGATTTTCTTTTACTTGGAAATCTTTTCTTTGCCATATTTTTATTAAAATCAAATTTCATC
256 TTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTTAAATCAAAGTTCATA
* * * *
332623 CCTTAAATAAGACAAGCATCGTTTCTCATAACATTCTCCATTCTTTTCAAGATTAGGAAG-CTAA
321 CCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGACTAGGAAGCCAAA
* * * * * * **
332687 AACACGTTCCTTTCATTAGGACACATGATATTGATGCTTTGATGTTGCAAGAAAAGCTTTTCTTT
386 AACACATTCCCTTCATTAGGATACATGACATTAATGCTTTGGTGTCACAAGAAAAGCTTTTCTTT
*
332752 CCACCGTTTTTGATAGATTAAAAGT
451 CCACCGTTTTTGATGGA-TAAAAGT
* * * *** *
332777 TTGTCTCTCAAATACGATAAACATGAATACTCATACTAATCCCCATCTTTTTAAGAATTAGGCAC
1 TTGTCTCTTAAATACGACAAACAAGAATACTCATACTAATCCAGTTCTTTTT-AGGATTAGGCAC
* * * * *
332842 CATAAACATAGTTTTCTCACTAAGATACATCATGTTGATGCTTTGGTTTTGCAAGAAAGGCATTT
65 CATAAACATAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCATTT
* * * *
332907 TTCCCACCAATTTTTGTAAAGTTTAAGTTCGCGCCTCAATTAAGACAAATATGGAGATTCTAGTA
130 TTCCCACCAATTTTTGTAAAGTTTAAGTTCGTGCCTCAAATGAGACAAACAT-G-GATTCTAGTA
* * * * *
332972 ATGATCTTCATTCATTTTGTGACTAGGCACTATAAATACATTCTCCTACTAGGATAAACGATACT
193 ATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTATTAGGATAAATGATATT
* * * * * *
333037 AACGATTTACTTTTGCGTGGAAATCTTTTCTTTGCCCTATTTTCTTTTAAATCAAAGCTCATACC
258 GATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTTAAATCAAAGTTCATACC
* * * * * *
333102 TTAAATATGACAAGCATCGATTCTCATAATAGTCTCCATTCTTTTTAAGGCTGGGAATCCAAAAA
323 TTAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGACTAGGAAGCCAAAAA
* * * *
333167 CACATTCCTTTCATTAGGATACATGACGTTGATGCTTTGGTGTCACGAGAAAAGCTTTTCTTTCC
388 CACATTCCCTTCATTAGGATACATGACATTAATGCTTTGGTGTCACAAGAAAAGCTTTTCTTTCC
* *
333232 ACTGTTTTTGATGGGATCAAAGT
453 ACCGTTTTTGAT-GGATAAAAGT
* *
333255 TTGTCTCTTAAATACGACAAACAAGAATACACATACTAATCCGAGTTCTTTTCAGGATTAGGCAC
1 TTGTCTCTTAAATACGACAAACAAGAATACTCATACTAATCC-AGTTCTTTTTAGGATTAGGCAC
* * *
333320 CAT-AAGATAGTCTTCTAATTAGGATACATCATATTGATGCTTTGGTTTCACAAGAAAGGCATTT
65 CATAAACATAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCATTT
* * *
333384 TTCCCACCAATTTTCGTAAGGTTTAAGTTTGTGCCTCAAATGAGACAAACATGGATTCTAGTAAT
130 TTCCCACCAATTTTTGTAAAGTTTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAAT
* ** * * *
333449 GATCTTTATTCATTTTGTGATTAGGTGCTCTAAACACATTCTCCTCATAAGGATAAATGAAATTG
195 GATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCT-ATTAGGATAAATGATATTG
* * * *
333514 ATGATTTTTTTTTGCCTGGAAATCTTTTCTTTACCCTATTTTCCTTTAAATAAAAGTTCATACCT
259 ATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTTAAATCAAAGTTCATACCT
* * * * *
333579 TAAATAAGACAAACATCGATTTTCACAACAGTGTCCCTTCTTTTCAAGACTAGGAAGCCAAAAAC
324 TAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGACTAGGAAGCCAAAAAC
* * * * * **
333644 AAATTCCCTTCATTACGATACATGATATTAAGGCTTTGGTGTCACAAGAAATGCTTTTCTTTCTG
389 ACATTCCCTTCATTAGGATACATGACATTAATGCTTTGGTGTCACAAGAAAAGCTTTTCTTTCCA
* * *
333709 CCATTTTTGATAGAATTAAAGT
454 CCGTTTTTGAT-GGATAAAAGT
* * * * *
333731 TTATCTGTTAAATATGACAAACATA-AATACTCATACTAATCCTTGTTCTTTTTAGGATTAGGTA
1 TTGTCTCTTAAATACGACAAACA-AGAATACTCATACTAATCC-AGTTCTTTTTAGGATTAGGCA
* *
333795 CCAAAAACATAGTCTTCTCATTAGGATACATCATATTGATGCTTTCGTTTCGCAAGAAAGGC-TA
64 CCATAAACATAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCAT-
* * * * *
333859 TTTTCCCACCAATTTTTGTAAA-TTCTATGTTCTTACCTCAAATGAGTC-AACACGGATTCTAGT
128 TTTTCCCACCAATTTTTGTAAAGTT-TAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGT
* * *
333922 AATGATCTTCATTCATTTTATGATTAGGCTCTATAAACACGTTCT-CTAATTAGGATAAATGATA
192 AATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCT-ATTAGGATAAATGATA
* * *
333986 TAGATGATTTTCTTTTGCATAGAAAT-ATTTCTTTGCCCTATTTTCCTTTAAATCAAAGTTCATA
256 TTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTTAAATCAAAGTTCATA
* * * * *
334050 CCTTAAATAAGACAATCATCAATTCTCGTAACAGTCTCCATTCTTTTCAAGGCTGGGAAGCCAAA
321 CCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGACTAGGAAGCCAAA
* * * * * * * *
334115 AATAGATTCCCTTCATTGGGATACATGACGTTAATGCTTTGATTTCGCAAGAAAGGCTTTT
386 AACACATTCCCTTCATTAGGATACATGACATTAATGCTTTGGTGTCACAAGAAAAGCTTTT
334176 TGCCCACCAA
Statistics
Matches: 1193, Mismatches: 192, Indels: 30
0.84 0.14 0.02
Matches are distributed among these distances:
474 141 0.12
475 151 0.13
476 403 0.34
477 316 0.26
478 174 0.15
479 8 0.01
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (474 bp):
TTGTCTCTTAAATACGACAAACAAGAATACTCATACTAATCCAGTTCTTTTTAGGATTAGGCACC
ATAAACATAGTCTTCTCATTAGGATACATCATATTGATGCTTTGGTTTCGCAAGAAAGGCATTTT
TCCCACCAATTTTTGTAAAGTTTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATG
ATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTATTAGGATAAATGATATTGAT
GATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTTAAATCAAAGTTCATACCTTA
AATAAGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGACTAGGAAGCCAAAAACAC
ATTCCCTTCATTAGGATACATGACATTAATGCTTTGGTGTCACAAGAAAAGCTTTTCTTTCCACC
GTTTTTGATGGATAAAAGT
Found at i:334295 original size:316 final size:315
Alignment explanation
Indices: 333833--334809 Score: 1293
Period size: 316 Copynumber: 3.1 Consensus size: 315
333823 CATCATATTG
* *
333833 ATGCTTTCG-TTTCGCAAGAAAGGCTATTTTCCCACCAATTTTTGTAAATTCTATGTTCTTACCT
1 ATGCTTT-GATTTCGCAAGAAAGGCT-TTTTCCCACCAATTTTTGTAAAGTCTATGTTCATACCT
*
333897 CAAATGAGTC-AACACGGATTCTAGTAATGATCTTCATTCATTTTATGATTAGGCTCTATAAACA
64 CAAATGAGACAAACACGGATTCTAGTAATGATCTTCATTCATTTTATGATTAGGCTCTATAAACA
*
333961 CGTTCTCTAATTAGGATAAATGATATAGATGATTTTCTTTTGCATAGAAATATTTCTTTGCCCTA
129 CATTCTCTAATTAGGATAAATGATATAGATGATTTTCTTTTGCATAGAAATATTTCTTTGCCCTA
* *
334026 TTTTCCTTTAAATCAAAGTTCATACCTTAAATAAGACAATCATCAATTCTCGTAACAGTCTCCAT
194 TTTTTCTTTAAATCAAAGTTCATACCTTAAATAAGACAAGCATCAATTCTCGTAACAGTCTCCAT
* *
334091 TCTTTTCAAGGCTGGGAAGCCAAAAATAGATTCCCTTCATTGGGATACATGACGTTA
259 TCTTTTCAAGGCTGGGAAGCCAAAAACACATTCCCTTCATTGGGATACATGACGTTA
*
334148 ATGCTTTGATTTCGCAAGAAAGGCTTTTTGCCCACCAATTTTTGTAAAGTCTATGTTCATACCCC
1 ATGCTTTGATTTCGCAAGAAAGGCTTTTT-CCCACCAATTTTTGTAAAGTCTATGTTCATACCTC
*
334213 AAATGTGACAAACACGGATTCTAGTAATGATCTTCATTCATTTTATGATTAGGCTCTATAAACAC
65 AAATGAGACAAACACGGATTCTAGTAATGATCTTCATTCATTTTATGATTAGGCTCTATAAACAC
* *
334278 ATTCTCTAATTAGGATAAATGATATAGATGATTTTTTTTTGCATAGAAATCTTTCTTTGCCCTAT
130 ATTCTCTAATTAGGATAAATGATATAGATGATTTTCTTTTGCATAGAAATATTTCTTTGCCCTAT
* * * *
334343 TTTTCTTTAAATCAGAGTTTATACCTTAAATAAGACAAGCACCAATTCTCGCAACAGTCTCCATT
195 TTTTCTTTAAATCAAAGTTCATACCTTAAATAAGACAAGCATCAATTCTCGTAACAGTCTCCATT
* *
334408 CTTTTCGAGGCTGAGAAGCCAAAAACACATTCCCTTCATTGGGATACATGACGTTA
260 CTTTTCAAGGCTGGGAAGCCAAAAACACATTCCCTTCATTGGGATACATGACGTTA
* * * * * * *
334464 ATGCTTTGATTTTGCAAGAAAGGCTTTTCACCCACCAATTTTTGTAAAGTCTAAGTCCGTGCTTC
1 ATGCTTTGATTTCGCAAGAAAGGCTTTT-TCCCACCAATTTTTGTAAAGTCTATGTTCATACCTC
* * * *
334529 AATTGAGACAAAC-CTGGATTCTAGTAATGATCTTCATTC-TCTTTGTGA-TAGGCACTATATAC
65 AAATGAGACAAACAC-GGATTCTAGTAATGATCTTCATTCAT-TTTATGATTAGGCTCTATAAAC
* * * * * * *
334591 ACATTCTCCTCATTAAGATAAATGATATTGACGATTTTCTTTTCTGCATGGAAATCTTTTCTTTA
128 ACATTCT-CTAATTAGGATAAATGATATAGATGATTTTC-TTT-TGCATAGAAAT-ATTTCTTTG
** * ** ** ** *
334656 CTTTATTTTTCTTAAAATCAAAGTTCACCCCTTAAATAAGACAAGCATCGTTTCTTATAACATTC
189 CCCTATTTTTCTTTAAATCAAAGTTCATACCTTAAATAAGACAAGCATCAATTCTCGTAACAGTC
* ** * * * * * *
334721 TCCATTGTTTTCAAGATTGGAAAGCC-AAAACACATTTCCTTCATTAGGACACATGACATTG
254 TCCATTCTTTTCAAGGCTGGGAAGCCAAAAACACATTCCCTTCATTGGGATACATGACGTTA
* *
334782 ATGCTTTGGTGTT-GCAAGAAAAGCTTTT
1 ATGCTTTGAT-TTCGCAAGAAAGGCTTTT
334810 CTTTCCACAG
Statistics
Matches: 585, Mismatches: 66, Indels: 19
0.87 0.10 0.03
Matches are distributed among these distances:
314 5 0.01
315 83 0.14
316 351 0.60
317 3 0.01
318 63 0.11
319 80 0.14
ACGTcount: A:0.30, C:0.19, G:0.14, T:0.37
Consensus pattern (315 bp):
ATGCTTTGATTTCGCAAGAAAGGCTTTTTCCCACCAATTTTTGTAAAGTCTATGTTCATACCTCA
AATGAGACAAACACGGATTCTAGTAATGATCTTCATTCATTTTATGATTAGGCTCTATAAACACA
TTCTCTAATTAGGATAAATGATATAGATGATTTTCTTTTGCATAGAAATATTTCTTTGCCCTATT
TTTCTTTAAATCAAAGTTCATACCTTAAATAAGACAAGCATCAATTCTCGTAACAGTCTCCATTC
TTTTCAAGGCTGGGAAGCCAAAAACACATTCCCTTCATTGGGATACATGACGTTA
Found at i:336619 original size:13 final size:13
Alignment explanation
Indices: 336601--336626 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
336591 CAATTTTTTG
336601 TGTATCGATACAT
1 TGTATCGATACAT
336614 TGTATCGATACAT
1 TGTATCGATACAT
336627 ACTTTGTGAA
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.31, C:0.15, G:0.15, T:0.38
Consensus pattern (13 bp):
TGTATCGATACAT
Found at i:336640 original size:32 final size:33
Alignment explanation
Indices: 336581--336644 Score: 94
Period size: 32 Copynumber: 2.0 Consensus size: 33
336571 TACAAGCCAA
** *
336581 TGTATCGATACAATTTTTTGTGTATCGATACAT
1 TGTATCGATACAATACTTTGTGAATCGATACAT
336614 TGTATCGATAC-ATACTTTGTGAATCGATACA
1 TGTATCGATACAATACTTTGTGAATCGATACA
336645 AGTTTGGCTA
Statistics
Matches: 28, Mismatches: 3, Indels: 1
0.88 0.09 0.03
Matches are distributed among these distances:
32 17 0.61
33 11 0.39
ACGTcount: A:0.30, C:0.14, G:0.16, T:0.41
Consensus pattern (33 bp):
TGTATCGATACAATACTTTGTGAATCGATACAT
Found at i:338135 original size:21 final size:20
Alignment explanation
Indices: 338106--338148 Score: 50
Period size: 20 Copynumber: 2.1 Consensus size: 20
338096 AACTAGTGTG
* *
338106 GGGACTGCCCGGTTGGGACCT
1 GGGACTG-CCGGTCGCGACCT
*
338127 GGGAGTGCCGGTCGCGACCT
1 GGGACTGCCGGTCGCGACCT
338147 GG
1 GG
338149 TGGTGCTGCC
Statistics
Matches: 19, Mismatches: 3, Indels: 1
0.83 0.13 0.04
Matches are distributed among these distances:
20 13 0.68
21 6 0.32
ACGTcount: A:0.09, C:0.28, G:0.47, T:0.16
Consensus pattern (20 bp):
GGGACTGCCGGTCGCGACCT
Found at i:338468 original size:21 final size:20
Alignment explanation
Indices: 338422--338468 Score: 51
Period size: 21 Copynumber: 2.3 Consensus size: 20
338412 TTTGATGCTG
338422 GTTTTGATGAAAAACGAAGT
1 GTTTTGATGAAAAACGAAGT
**
338442 AATTTGAAGTGAAAAAC-AAGT
1 GTTTTG-A-TGAAAAACGAAGT
338463 GTTTTG
1 GTTTTG
338469 CAAAAGATTT
Statistics
Matches: 21, Mismatches: 4, Indels: 3
0.75 0.14 0.11
Matches are distributed among these distances:
20 4 0.19
21 9 0.43
22 8 0.38
ACGTcount: A:0.40, C:0.04, G:0.23, T:0.32
Consensus pattern (20 bp):
GTTTTGATGAAAAACGAAGT
Found at i:338599 original size:13 final size:13
Alignment explanation
Indices: 338581--338619 Score: 69
Period size: 13 Copynumber: 3.0 Consensus size: 13
338571 TAATCCCCCC
*
338581 TGTATCGATACAG
1 TGTATCGATACAA
338594 TGTATCGATACAA
1 TGTATCGATACAA
338607 TGTATCGATACAA
1 TGTATCGATACAA
338620 AGAAAAATGT
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
13 25 1.00
ACGTcount: A:0.36, C:0.15, G:0.18, T:0.31
Consensus pattern (13 bp):
TGTATCGATACAA
Done.