Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1573
Parameters: 2 7 7 80 10 50 1000
Length:  40646

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--18860
476
39.6
476
96
0
34443
35
14
17
31
1.91
497--18831
159
115.5
158
64
15
4136
35
14
17
31
1.91
19835--20038
76
2.6
78
80
5
218
28
16
29
25
1.96
19990--20061
28
2.6
28
88
0
99
23
19
34
22
1.96
20050--20219
52
3.3
50
79
11
182
32
12
24
29
1.93
20193--20274
27
3.0
28
82
10
98
26
21
29
21
1.99
22691--22716
13
2.0
13
100
0
52
38
15
15
30
1.88
22670--22736
33
2.0
33
88
0
98
43
16
14
25
1.86
23324--24166
55
15.3
54
91
3
1223
20
20
29
29
1.98
23757--23844
26
3.3
26
65
20
63
21
18
31
28
1.97
24030--24119
26
3.3
26
68
14
83
21
17
32
28
1.96
25148--25191
1
44.0
1
81
0
52
0
4
4
90
0.53
25132--25191
7
7.8
8
80
10
63
0
10
3
86
0.67
25148--25192
15
3.0
15
86
0
63
0
4
6
88
0.61
37598--37801
76
2.6
78
80
5
218
28
16
29
25
1.96
37753--37824
28
2.6
28
88
0
99
23
19
34
22
1.96
37813--37982
52
3.3
50
79
11
182
32
12
24
29
1.93
37956--38037
27
3.0
28
82
10
98
26
21
29
21
1.99
40459--40484
13
2.0
13
100
0
52
38
15
15
30
1.88

Tables:   1

The End!