Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1581
Parameters: 2 7 7 80 10 50 1000
Length:  16408

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
387--416
15
2.0
15
93
0
51
46
16
13
23
1.82
3093--3148
26
2.0
28
83
10
71
48
0
0
51
1.00
3099--3173
36
2.2
33
79
16
80
45
0
0
54
0.99
5620--5649
2
15.0
2
100
0
60
50
0
0
50
1.00
5937--5989
26
2.1
27
82
10
76
45
0
0
54
0.99
5910--5977
21
3.3
21
74
25
65
45
0
0
54
0.99
5964--6043
36
2.2
36
80
14
94
57
0
0
42
0.98
6125--6199
27
2.8
27
79
15
68
56
0
0
44
0.99
11380--11635
50
5.2
50
90
3
378
31
18
21
29
1.97
11380--11635
99
2.6
98
92
4
408
31
18
21
29
1.97
16042--16296
49
5.2
49
92
5
419
29
20
21
29
1.98

Tables:   1

The End!