Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1585
Parameters: 2 7 7 80 10 50 1000
Length:  26276

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1521--1546
13
2.0
13
100
0
52
30
15
15
38
1.88
1585--1660
21
3.7
21
80
3
100
28
17
11
42
1.84
1606--1678
20
3.6
20
81
3
101
31
19
13
35
1.91
1585--1678
41
2.3
41
98
0
179
29
18
12
39
1.88
4116--4154
13
3.0
13
96
0
69
35
15
17
30
1.91
4140--4218
20
3.7
20
75
18
70
45
15
13
25
1.83
6233--6263
15
2.1
15
93
0
53
12
22
16
48
1.80
10320--10345
13
2.0
13
100
0
52
30
15
15
38
1.88
10384--10459
21
3.7
21
80
3
100
28
17
11
42
1.84
10405--10477
20
3.6
20
81
3
101
31
19
13
35
1.91
10384--10477
41
2.3
41
98
0
179
29
18
12
39
1.88
12204--12253
20
2.5
20
87
6
66
34
18
12
36
1.87
12221--12267
20
2.3
20
88
3
67
31
14
12
40
1.84
21912--21965
20
2.7
20
77
11
58
37
16
12
33
1.87
21994--22051
19
3.0
20
82
7
75
36
17
13
32
1.89
22016--22080
33
2.0
33
88
8
98
41
15
12
30
1.84
22632--22676
23
2.0
23
87
8
67
42
20
4
33
1.72
24431--24480
21
2.4
21
83
9
59
48
0
20
32
1.50
24438--24480
21
2.0
22
86
4
61
51
0
20
27
1.48
24595--24627
13
2.5
13
90
0
57
42
12
15
30
1.83

Tables:   1

The End!