Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1589
Parameters: 2 7 7 80 10 50 1000
Length:  31518

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
155--194
21
1.9
22
90
10
66
37
20
12
30
1.89
6685--6786
42
2.4
43
85
4
136
34
19
13
32
1.91
7211--7260
27
1.9
26
88
8
75
24
36
16
24
1.94
14499--14528
13
2.2
14
94
5
53
40
0
0
60
0.97
16811--16915
53
2.0
54
94
1
185
56
11
10
21
1.65
17655--17759
45
2.3
45
82
6
124
30
4
0
64
1.14
17679--17759
22
3.7
21
73
14
65
32
3
0
64
1.11
18498--18552
27
2.0
27
100
0
110
27
25
21
25
2.00
19481--19533
20
2.7
20
100
0
106
26
15
15
43
1.85
27719--27761
21
2.0
23
86
9
63
34
4
20
39
1.74
28344--28400
19
2.9
19
89
2
87
31
15
17
35
1.92
30703--30780
40
2.0
40
86
0
111
35
10
12
41
1.77

Tables:   1

The End!