Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1592
Parameters: 2 7 7 80 10 50 1000
Length:  20322

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1201--1231
5
6.2
5
100
0
62
80
0
0
19
0.71
4515--4549
15
2.3
15
90
0
52
40
0
11
48
1.39
4673--4722
21
2.3
21
82
3
64
46
0
2
52
1.12
4702--4736
17
2.1
17
88
0
52
62
0
0
37
0.95
5248--5276
7
4.1
7
100
0
58
44
0
13
41
1.44
5487--5532
14
3.2
14
81
6
56
45
0
0
54
0.99
5718--5770
18
2.9
18
77
8
63
52
0
0
47
1.00
6513--6586
34
2.1
35
90
5
114
40
0
1
58
1.07
14395--14438
18
2.7
16
80
16
54
61
4
4
29
1.36
17359--17385
14
1.9
14
100
0
54
29
0
25
44
1.54
19092--19116
11
2.3
11
100
0
50
28
0
0
72
0.86
20020--20050
15
2.0
16
93
6
55
51
0
0
48
1.00

Tables:   1

The End!