Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1602
Parameters: 2 7 7 80 10 50 1000
Length:  73913

Tables:   1   

This is table  1  of  1  ( 45 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2266--2305
16
2.6
16
92
4
64
27
22
15
35
1.94
2733--2857
15
8.4
16
68
25
69
40
0
0
60
0.97
2726--2847
14
8.5
15
75
19
93
39
0
0
60
0.97
2723--2856
53
2.5
53
82
8
141
41
0
0
58
0.98
3633--3658
13
2.0
13
100
0
52
7
23
7
61
1.49
7676--7766
27
3.5
26
81
8
105
24
7
21
46
1.78
8249--8313
23
3.1
23
66
25
70
26
0
16
56
1.40
8222--8313
40
2.3
40
96
0
166
25
1
18
55
1.49
8234--8297
17
3.4
17
69
22
56
23
0
23
53
1.47
8364--8404
21
2.0
20
85
4
55
26
2
4
65
1.25
9790--10286
154
3.2
155
77
7
417
28
15
15
40
1.88
12358--12392
16
2.2
16
100
0
70
34
28
5
31
1.81
12779--12804
13
2.0
13
100
0
52
38
15
7
38
1.76
15169--15284
51
2.2
52
82
7
139
31
22
12
34
1.91
15274--15349
27
2.8
27
88
6
100
26
31
19
22
1.98
15170--15712
52
10.4
51
66
11
195
29
26
12
31
1.92
15170--15822
210
3.1
210
91
0
1011
28
27
12
31
1.93
21059--21097
21
1.9
20
94
5
69
35
12
15
35
1.86
23403--23452
22
2.4
22
80
6
59
40
12
16
32
1.84
26117--26156
21
1.9
21
100
0
80
22
10
25
42
1.84
26436--26473
16
2.4
16
86
8
51
39
2
0
57
1.12
28005--28036
15
2.1
15
100
0
64
31
6
6
56
1.49
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
28720--28760
2
20.5
2
94
0
73
48
0
2
48
1.14
30036--30068
2
16.5
2
100
0
66
51
0
0
48
1.00
48266--48350
29
3.2
25
79
19
75
37
0
1
61
1.04
48584--48753
25
6.2
27
71
21
97
39
0
1
58
1.10
48551--48711
68
2.4
65
80
10
159
37
0
1
60
1.09
48605--48732
9
13.3
10
75
18
89
38
0
0
60
1.02
48609--48728
20
5.8
20
71
20
79
37
0
0
61
1.02
49780--49826
23
2.0
24
87
4
69
38
0
2
59
1.09
50257--50310
14
3.5
14
76
18
54
83
0
16
0
0.65
50332--50376
19
2.6
17
83
16
58
40
0
0
60
0.97
52027--52071
17
2.5
18
85
7
56
46
0
0
53
1.00
52209--52263
28
2.0
29
82
7
69
52
1
0
45
1.11
56334--56643
48
6.6
48
86
4
416
35
17
25
20
1.95
56334--56643
95
3.3
94
88
3
428
35
17
25
20
1.95
56331--56649
143
2.3
140
88
3
478
35
17
25
21
1.95
56714--57722
32
33.1
28
79
9
296
22
19
28
29
1.98
56714--57188
56
8.1
55
77
10
279
23
19
28
28
1.98
56737--56903
84
2.0
84
83
4
212
23
20
27
28
1.99
56890--57734
32
27.2
32
83
4
923
21
19
28
30
1.98
68527--68564
2
19.0
2
94
0
67
52
0
0
47
1.00
70915--70948
18
1.9
17
88
5
50
58
0
0
41
0.98
72136--72192
12
4.9
11
77
16
53
52
0
0
47
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
73450--73494
22
2.0
22
87
8
65
64
0
0
35
0.94

Tables:   1

The End!