Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1606
Parameters: 2 7 7 80 10 50 1000
Length:  34041

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
744--786
3
14.3
3
100
0
86
32
0
0
67
0.91
1283--1320
20
1.9
20
88
0
58
65
13
18
2
1.37
2068--2104
3
12.3
3
100
0
74
64
0
35
0
0.94
2717--2844
62
2.1
62
100
0
256
52
6
12
28
1.63
2736--2860
62
2.1
60
86
7
175
56
4
13
24
1.56
2905--2973
16
4.3
15
78
14
66
40
5
0
53
1.25
2901--2962
32
1.9
32
84
12
83
38
4
0
56
1.21
2970--3010
20
2.1
19
86
9
55
56
2
0
41
1.13
2898--2998
49
2.1
49
81
3
114
42
4
0
52
1.23
3084--3162
24
3.3
24
73
15
65
43
7
0
49
1.31
3149--3207
16
3.7
16
82
8
75
45
16
0
37
1.48
14640--14697
18
3.2
18
100
0
116
32
12
22
32
1.91
26657--26692
15
2.2
17
90
9
58
63
2
0
33
1.08
31291--31344
27
2.0
27
82
7
65
62
3
7
25
1.38

Tables:   1

The End!