Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: Scaffold161
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 434478
ACGTcount: A:0.30, C:0.14, G:0.14, T:0.30
Warning! 56201 characters in sequence are not A, C, G, or T
File 3 of 4
Found at i:264288 original size:14 final size:15
Alignment explanation
Indices: 264263--264291 Score: 51
Period size: 14 Copynumber: 2.0 Consensus size: 15
264253 GGATAATATA
264263 TATTTCATATTCATT
1 TATTTCATATTCATT
264278 TATTT-ATATTCATT
1 TATTTCATATTCATT
264292 AATTAATCTA
Statistics
Matches: 14, Mismatches: 0, Indels: 1
0.93 0.00 0.07
Matches are distributed among these distances:
14 9 0.64
15 5 0.36
ACGTcount: A:0.28, C:0.10, G:0.00, T:0.62
Consensus pattern (15 bp):
TATTTCATATTCATT
Found at i:268853 original size:2 final size:2
Alignment explanation
Indices: 268846--268873 Score: 56
Period size: 2 Copynumber: 14.0 Consensus size: 2
268836 AGCATTTATT
268846 TA TA TA TA TA TA TA TA TA TA TA TA TA TA
1 TA TA TA TA TA TA TA TA TA TA TA TA TA TA
268874 AGCCTAAAAG
Statistics
Matches: 26, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 26 1.00
ACGTcount: A:0.50, C:0.00, G:0.00, T:0.50
Consensus pattern (2 bp):
TA
Found at i:269848 original size:36 final size:36
Alignment explanation
Indices: 269799--269874 Score: 143
Period size: 36 Copynumber: 2.1 Consensus size: 36
269789 TTAAAGAAAC
*
269799 AAGCAAAGGCGATTGCAGTAGGGGACCGAAGGGGGA
1 AAGCAAAGACGATTGCAGTAGGGGACCGAAGGGGGA
269835 AAGCAAAGACGATTGCAGTAGGGGACCGAAGGGGGA
1 AAGCAAAGACGATTGCAGTAGGGGACCGAAGGGGGA
269871 AAGC
1 AAGC
269875 TGTAAAAATT
Statistics
Matches: 39, Mismatches: 1, Indels: 0
0.98 0.03 0.00
Matches are distributed among these distances:
36 39 1.00
ACGTcount: A:0.36, C:0.14, G:0.42, T:0.08
Consensus pattern (36 bp):
AAGCAAAGACGATTGCAGTAGGGGACCGAAGGGGGA
Found at i:270086 original size:74 final size:74
Alignment explanation
Indices: 269965--270130 Score: 264
Period size: 74 Copynumber: 2.2 Consensus size: 74
269955 TAGTTGGTAC
*
269965 TAAATTTTC-AGCTAGGCCCTCCAAGTCAAGAAAGCATGGCTTGTGTTGTGACCAATTGTTGGGC
1 TAAATTTTCGA-CCAGGCCCTCCAAGTCAAGAAAGCATGGCTTGTGTTGTGACCAATTGTTGGGC
*
270029 ATGAATGGCT
65 ATGAATGCCT
*
270039 TAAATTTTCGACCAGGCCCTCGC-AGTCAAGAAAGCATTGCTTGTGTTGTGACCAATTGTTGGGC
1 TAAATTTTCGACCAGGCCCTC-CAAGTCAAGAAAGCATGGCTTGTGTTGTGACCAATTGTTGGGC
270103 ATGAATGCCT
65 ATGAATGCCT
*
270113 TAAATTTTCGGCCAGGCC
1 TAAATTTTCGACCAGGCC
270131 AGTTCAAATC
Statistics
Matches: 86, Mismatches: 4, Indels: 4
0.91 0.04 0.04
Matches are distributed among these distances:
74 84 0.98
75 2 0.02
ACGTcount: A:0.25, C:0.21, G:0.25, T:0.30
Consensus pattern (74 bp):
TAAATTTTCGACCAGGCCCTCCAAGTCAAGAAAGCATGGCTTGTGTTGTGACCAATTGTTGGGCA
TGAATGCCT
Found at i:270637 original size:18 final size:16
Alignment explanation
Indices: 270590--270640 Score: 54
Period size: 18 Copynumber: 3.2 Consensus size: 16
270580 GATATTTAAA
270590 AAATTTATAT-AATAT
1 AAATTTATATAAATAT
270605 AAA-TTAT-TAACATAT
1 AAATTTATATAA-ATAT
270620 CAATATTTATATAAATAT
1 -AA-ATTTATATAAATAT
270638 AAA
1 AAA
270641 ATATAATAAA
Statistics
Matches: 30, Mismatches: 0, Indels: 11
0.73 0.00 0.27
Matches are distributed among these distances:
13 1 0.03
14 5 0.17
15 7 0.23
16 3 0.10
17 3 0.10
18 8 0.27
19 3 0.10
ACGTcount: A:0.55, C:0.04, G:0.00, T:0.41
Consensus pattern (16 bp):
AAATTTATATAAATAT
Found at i:271494 original size:49 final size:50
Alignment explanation
Indices: 271299--271507 Score: 276
Period size: 50 Copynumber: 4.2 Consensus size: 50
271289 AGGTCTTGTC
* * * **
271299 ATTGTTGACTATTCTTTACCAACCATTAACAATCGAGAAAGGTGACTATA
1 ATTGTTGACTATTCTTCACCAACCTTTGACAATCGAGAAAGGTGACCGTA
* * * **
271349 ATTGTTGGCTATTCTTCACCAACTTTTGACAATCGAGAGAGGTGGTCGTA
1 ATTGTTGACTATTCTTCACCAACCTTTGACAATCGAGAAAGGTGACCGTA
* * *
271399 ATTGTTGGCTATTATTCACCAACCTTTGACAATCGAGAGAGGTGACCGTA
1 ATTGTTGACTATTCTTCACCAACCTTTGACAATCGAGAAAGGTGACCGTA
* *
271449 ATTGTTGACTATTCTTCACCAA-CTTTGACAATAGAAAAAGGTGACCGTA
1 ATTGTTGACTATTCTTCACCAACCTTTGACAATCGAGAAAGGTGACCGTA
271498 ATTGTTGACT
1 ATTGTTGACT
271508 CTAAGCATCT
Statistics
Matches: 140, Mismatches: 19, Indels: 1
0.88 0.12 0.01
Matches are distributed among these distances:
49 34 0.24
50 106 0.76
ACGTcount: A:0.30, C:0.18, G:0.19, T:0.33
Consensus pattern (50 bp):
ATTGTTGACTATTCTTCACCAACCTTTGACAATCGAGAAAGGTGACCGTA
Found at i:275935 original size:50 final size:50
Alignment explanation
Indices: 275880--276088 Score: 301
Period size: 50 Copynumber: 4.2 Consensus size: 50
275870 CAAAGGTGTT
* * * *
275880 GTAATTGTTGATTATTCTTCACCAATCTTTGACAATCAAGAGAGGTGGCC
1 GTAATTGTTGACTATTCTTCACCAACCTTTGACAATCGAGAGAGGTGACC
* * * *
275930 ATAATTGTTGACTATTCTTTATCAACCTTTGACAATCGAGAGAGATGACC
1 GTAATTGTTGACTATTCTTCACCAACCTTTGACAATCGAGAGAGGTGACC
*
275980 GTAATTGTTGACTATTCTTCACCAATCTTTGACAATCGAGAGAGGTGACC
1 GTAATTGTTGACTATTCTTCACCAACCTTTGACAATCGAGAGAGGTGACC
* * **
276030 GTAATTGTTGACTATTCTTCACCAACCTTTGACAATAGAGAAAGGTGATT
1 GTAATTGTTGACTATTCTTCACCAACCTTTGACAATCGAGAGAGGTGACC
276080 GTAATTGTT
1 GTAATTGTT
276089 AACTTTAAGT
Statistics
Matches: 141, Mismatches: 18, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
50 141 1.00
ACGTcount: A:0.30, C:0.17, G:0.19, T:0.34
Consensus pattern (50 bp):
GTAATTGTTGACTATTCTTCACCAACCTTTGACAATCGAGAGAGGTGACC
Found at i:277533 original size:14 final size:14
Alignment explanation
Indices: 277488--277539 Score: 52
Period size: 15 Copynumber: 3.5 Consensus size: 14
277478 GTGATGCAAT
277488 TAAATATAGAAAAGAA
1 TAAATATA-AAAA-AA
*
277504 -AATATAGAAAATAAA
1 TAA-ATATAAAA-AAA
277519 TAAATATAAAAAAA
1 TAAATATAAAAAAA
277533 TAAATAT
1 TAAATAT
277540 TTAAAGCACA
Statistics
Matches: 31, Mismatches: 2, Indels: 8
0.76 0.05 0.20
Matches are distributed among these distances:
14 10 0.32
15 14 0.45
16 7 0.23
ACGTcount: A:0.71, C:0.00, G:0.06, T:0.23
Consensus pattern (14 bp):
TAAATATAAAAAAA
Found at i:278418 original size:3 final size:3
Alignment explanation
Indices: 278412--278442 Score: 62
Period size: 3 Copynumber: 10.3 Consensus size: 3
278402 TTTTTTTGTC
278412 ATT ATT ATT ATT ATT ATT ATT ATT ATT ATT A
1 ATT ATT ATT ATT ATT ATT ATT ATT ATT ATT A
278443 ATATAAATTT
Statistics
Matches: 28, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
3 28 1.00
ACGTcount: A:0.35, C:0.00, G:0.00, T:0.65
Consensus pattern (3 bp):
ATT
Found at i:278697 original size:28 final size:28
Alignment explanation
Indices: 278637--278703 Score: 77
Period size: 27 Copynumber: 2.5 Consensus size: 28
278627 GATCGGACTT
* * *
278637 ATATATAATTTGATTTAATTTATAAATA
1 ATATTTAATTTTAATTAATTTATAAATA
278665 A-ATTTAATTTTAATTAATATTATAAA-A
1 ATATTTAATTTTAATTAAT-TTATAAATA
278692 ATATTT-ATTTTA
1 ATATTTAATTTTA
278704 GAGTTTATTT
Statistics
Matches: 34, Mismatches: 3, Indels: 5
0.81 0.07 0.12
Matches are distributed among these distances:
27 22 0.65
28 12 0.35
ACGTcount: A:0.46, C:0.00, G:0.01, T:0.52
Consensus pattern (28 bp):
ATATTTAATTTTAATTAATTTATAAATA
Found at i:279301 original size:10 final size:10
Alignment explanation
Indices: 279288--279319 Score: 50
Period size: 9 Copynumber: 3.4 Consensus size: 10
279278 TTTTAGTTTT
279288 TTTTTTCTCA
1 TTTTTTCTCA
279298 TTTTTTCT-A
1 TTTTTTCTCA
279307 TTTTTTC-CA
1 TTTTTTCTCA
279316 TTTT
1 TTTT
279320 AACGTGTTAT
Statistics
Matches: 21, Mismatches: 0, Indels: 3
0.88 0.00 0.12
Matches are distributed among these distances:
9 13 0.62
10 8 0.38
ACGTcount: A:0.09, C:0.16, G:0.00, T:0.75
Consensus pattern (10 bp):
TTTTTTCTCA
Found at i:279388 original size:13 final size:13
Alignment explanation
Indices: 279370--279396 Score: 54
Period size: 13 Copynumber: 2.1 Consensus size: 13
279360 ATTTGATCGA
279370 TGAACATTTTAAG
1 TGAACATTTTAAG
279383 TGAACATTTTAAG
1 TGAACATTTTAAG
279396 T
1 T
279397 AAAAAAAGAC
Statistics
Matches: 14, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 14 1.00
ACGTcount: A:0.37, C:0.07, G:0.15, T:0.41
Consensus pattern (13 bp):
TGAACATTTTAAG
Found at i:279998 original size:27 final size:27
Alignment explanation
Indices: 279968--280092 Score: 75
Period size: 27 Copynumber: 4.7 Consensus size: 27
279958 ACACACTTAA
279968 AAAATATTTAAAAATAATATAAATAAT
1 AAAATATTTAAAAATAATATAAATAAT
** *
279995 AAAA-ATTTTATATTATTATATAAATAATTT
1 AAAATA-TTTA-AAAATAATATAAATAA--T
* *
280025 AAAAT-TTT---TATAATATAAATTAT
1 AAAATATTTAAAAATAATATAAATAAT
* * *
280048 -TAATATATTAAAATTTATATAAAT-AT
1 AAAATAT-TTAAAAATAATATAAATAAT
280074 AAAATATATTAAAAATAAT
1 AAAATAT-TTAAAAATAAT
280093 TATGATACGA
Statistics
Matches: 75, Mismatches: 12, Indels: 22
0.69 0.11 0.20
Matches are distributed among these distances:
22 3 0.04
23 2 0.03
24 2 0.03
25 12 0.16
26 3 0.04
27 32 0.43
28 13 0.17
29 3 0.04
30 5 0.07
ACGTcount: A:0.58, C:0.00, G:0.00, T:0.42
Consensus pattern (27 bp):
AAAATATTTAAAAATAATATAAATAAT
Found at i:280035 original size:22 final size:21
Alignment explanation
Indices: 279993--280045 Score: 52
Period size: 22 Copynumber: 2.4 Consensus size: 21
279983 AATATAAATA
* *
279993 ATAAAAATTTTATATTATTAT
1 ATAAAAATTTAAAATTATTAT
*
280014 ATAAATAATTTAAAATTTTTAT
1 ATAAA-AATTTAAAATTATTAT
*
280036 AATATAAATT
1 -ATAAAAATT
280046 ATTAATATAT
Statistics
Matches: 26, Mismatches: 4, Indels: 3
0.79 0.12 0.09
Matches are distributed among these distances:
21 5 0.19
22 17 0.65
23 4 0.15
ACGTcount: A:0.51, C:0.00, G:0.00, T:0.49
Consensus pattern (21 bp):
ATAAAAATTTAAAATTATTAT
Found at i:280043 original size:16 final size:16
Alignment explanation
Indices: 280018--280078 Score: 54
Period size: 17 Copynumber: 3.8 Consensus size: 16
280008 TATTATATAA
*
280018 ATAATTTAAAATTTTT
1 ATAATATAAAATTTTT
*
280034 ATAATAT-AAATTATT
1 ATAATATAAAATTTTT
*
280049 A-ATATATTAAAATTTAT
1 ATA-ATA-TAAAATTTTT
280066 ATAAATATAAAAT
1 AT-AATATAAAAT
280079 ATATTAAAAA
Statistics
Matches: 36, Mismatches: 4, Indels: 9
0.73 0.08 0.18
Matches are distributed among these distances:
14 1 0.03
15 11 0.31
16 7 0.19
17 13 0.36
18 3 0.08
19 1 0.03
ACGTcount: A:0.54, C:0.00, G:0.00, T:0.46
Consensus pattern (16 bp):
ATAATATAAAATTTTT
Found at i:280413 original size:25 final size:24
Alignment explanation
Indices: 280385--280441 Score: 64
Period size: 25 Copynumber: 2.4 Consensus size: 24
280375 AATAATTATT
280385 TAAATATAAATAAAAT-ATAAATTAA
1 TAAATATAAATAAAATCATAAA-T-A
* *
280410 TAAATAT-ATTAAAATCTTAAATA
1 TAAATATAAATAAAATCATAAATA
280433 TAAATATAA
1 TAAATATAA
280442 TGTATATTAA
Statistics
Matches: 28, Mismatches: 2, Indels: 5
0.80 0.06 0.14
Matches are distributed among these distances:
23 8 0.29
24 9 0.32
25 11 0.39
ACGTcount: A:0.63, C:0.02, G:0.00, T:0.35
Consensus pattern (24 bp):
TAAATATAAATAAAATCATAAATA
Found at i:280466 original size:24 final size:22
Alignment explanation
Indices: 280426--280476 Score: 59
Period size: 22 Copynumber: 2.2 Consensus size: 22
280416 TATTAAAATC
280426 TTAAATATAAATATAAT-GTAT
1 TTAAATATAAATATAATCGTAT
*
280447 ATTAAATATATCATACTAATCGTAT
1 -TTAAATATA-AATA-TAATCGTAT
280472 TTAAA
1 TTAAA
280477 CATTTTATTT
Statistics
Matches: 25, Mismatches: 1, Indels: 4
0.83 0.03 0.13
Matches are distributed among these distances:
22 9 0.36
23 3 0.12
24 9 0.36
25 4 0.16
ACGTcount: A:0.49, C:0.06, G:0.04, T:0.41
Consensus pattern (22 bp):
TTAAATATAAATATAATCGTAT
Found at i:280532 original size:24 final size:23
Alignment explanation
Indices: 280504--280610 Score: 61
Period size: 24 Copynumber: 4.3 Consensus size: 23
280494 ACTATATTGT
*
280504 TTTTATGTTTATTAAGTATGTTA
1 TTTTATGTTTATTAAGTATGTCA
* *
280527 TATTTATATTTTATTTTTATATTATGTCA
1 T-TTTAT-GTTTA---TTA-AGTATGTCA
* * * * *
280556 TTTTATTTTGTGTTAATTATATTA
1 TTTTATGTT-TATTAAGTATGTCA
280580 TTTTTATGTTTATTAAGTATGTCA
1 -TTTTATGTTTATTAAGTATGTCA
280604 TGTTTAT
1 T-TTTAT
280611 ATTATATTTT
Statistics
Matches: 64, Mismatches: 11, Indels: 17
0.70 0.12 0.18
Matches are distributed among these distances:
23 2 0.03
24 27 0.42
25 15 0.23
27 3 0.05
28 9 0.14
29 8 0.12
ACGTcount: A:0.25, C:0.02, G:0.09, T:0.64
Consensus pattern (23 bp):
TTTTATGTTTATTAAGTATGTCA
Found at i:280563 original size:77 final size:77
Alignment explanation
Indices: 280477--280628 Score: 259
Period size: 77 Copynumber: 2.0 Consensus size: 77
280467 CGTATTTAAA
* * *
280477 CATTTTATTTTGTGTTAACTATATTGTTTTTATGTTTATTAAGTATGTTATATTTATATTTTATT
1 CATTTTATTTTGTGTTAACTATATTATTTTTATGTTTATTAAGTATGTCATATTTATATTATATT
280542 TTTATATTATGT
66 TTTATATTATGT
* *
280554 CATTTTATTTTGTGTTAATTATATTATTTTTATGTTTATTAAGTATGTCATGTTTATATTATATT
1 CATTTTATTTTGTGTTAACTATATTATTTTTATGTTTATTAAGTATGTCATATTTATATTATATT
280619 TTTATATTAT
66 TTTATATTAT
280629 ATTTAAAATT
Statistics
Matches: 70, Mismatches: 5, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
77 70 1.00
ACGTcount: A:0.26, C:0.03, G:0.09, T:0.63
Consensus pattern (77 bp):
CATTTTATTTTGTGTTAACTATATTATTTTTATGTTTATTAAGTATGTCATATTTATATTATATT
TTTATATTATGT
Found at i:280589 original size:20 final size:19
Alignment explanation
Indices: 280496--280594 Score: 53
Period size: 20 Copynumber: 5.1 Consensus size: 19
280486 TTGTGTTAAC
*
280496 TATATTGTTTTTATGTTTAT
1 TATATTATTTTTATG-TTAT
* *
280516 TA-AGTATGTTATAT-TTA-
1 TATATTAT-TTTTATGTTAT
* *
280533 TATTTTATTTTTATATTAT
1 TATATTATTTTTATGTTAT
* *
280552 GTCATTTTA-TTTTGTGTTAAT
1 -T-ATATTATTTTTATGTT-AT
280573 TATATTATTTTTATGTTTAT
1 TATATTATTTTTATG-TTAT
280593 TA
1 TA
280595 AGTATGTCAT
Statistics
Matches: 60, Mismatches: 10, Indels: 18
0.68 0.11 0.20
Matches are distributed among these distances:
17 7 0.12
18 9 0.15
19 8 0.13
20 26 0.43
21 10 0.17
ACGTcount: A:0.25, C:0.01, G:0.08, T:0.66
Consensus pattern (19 bp):
TATATTATTTTTATGTTAT
Found at i:280624 original size:13 final size:13
Alignment explanation
Indices: 280606--280632 Score: 54
Period size: 13 Copynumber: 2.1 Consensus size: 13
280596 GTATGTCATG
280606 TTTATATTATATT
1 TTTATATTATATT
280619 TTTATATTATATT
1 TTTATATTATATT
280632 T
1 T
280633 AAAATTATTA
Statistics
Matches: 14, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 14 1.00
ACGTcount: A:0.30, C:0.00, G:0.00, T:0.70
Consensus pattern (13 bp):
TTTATATTATATT
Found at i:280866 original size:16 final size:16
Alignment explanation
Indices: 280845--280898 Score: 56
Period size: 16 Copynumber: 3.4 Consensus size: 16
280835 ATAATATGAA
*
280845 TATATATTTTAAAATT
1 TATATATTATAAAATT
*
280861 TATATAATAT-AAATT
1 TATATATTATAAAATT
* *
280876 TTTACTATTATAAAATC
1 TATA-TATTATAAAATT
280893 TATATA
1 TATATA
280899 AATATAAAAA
Statistics
Matches: 30, Mismatches: 6, Indels: 4
0.75 0.15 0.10
Matches are distributed among these distances:
15 8 0.27
16 15 0.50
17 7 0.23
ACGTcount: A:0.46, C:0.04, G:0.00, T:0.50
Consensus pattern (16 bp):
TATATATTATAAAATT
Found at i:280926 original size:20 final size:21
Alignment explanation
Indices: 280898--280938 Score: 57
Period size: 20 Copynumber: 2.0 Consensus size: 21
280888 AAATCTATAT
*
280898 AAATATAAAAAATTTTAAATA
1 AAATATAAAAAATATTAAATA
*
280919 AAAT-TAAAATATATTAAATA
1 AAATATAAAAAATATTAAATA
280939 TATGAACATA
Statistics
Matches: 18, Mismatches: 2, Indels: 1
0.86 0.10 0.05
Matches are distributed among these distances:
20 14 0.78
21 4 0.22
ACGTcount: A:0.66, C:0.00, G:0.00, T:0.34
Consensus pattern (21 bp):
AAATATAAAAAATATTAAATA
Found at i:281261 original size:20 final size:20
Alignment explanation
Indices: 281227--281296 Score: 72
Period size: 21 Copynumber: 3.5 Consensus size: 20
281217 CATATTTATA
281227 ATATTTT-TATATTATAATT
1 ATATTTTATATATTATAATT
* *
281246 ATATTTTATGTATTATATATA
1 ATATTTTATATATTATA-ATT
* *
281267 ATATTTGATAAATTAATAATT
1 ATATTTTATATATT-ATAATT
281288 A-ATTTTATA
1 ATATTTTATA
281297 CATATTTTGA
Statistics
Matches: 41, Mismatches: 7, Indels: 5
0.77 0.13 0.09
Matches are distributed among these distances:
19 7 0.17
20 15 0.37
21 16 0.39
22 3 0.07
ACGTcount: A:0.41, C:0.00, G:0.03, T:0.56
Consensus pattern (20 bp):
ATATTTTATATATTATAATT
Found at i:281267 original size:40 final size:39
Alignment explanation
Indices: 281192--281295 Score: 113
Period size: 40 Copynumber: 2.6 Consensus size: 39
281182 ATTTTTTTAT
* * *
281192 TTTTTATATTCTAA-AAATTTTATGTCATATTTATAATA
1 TTTTTATATTATAATTAATTTTATGTCATATATATAATA
281230 TTTTTATATTATAATTATATTTTATGT-ATTATATATAATA
1 TTTTTATATTATAATTA-ATTTTATGTCA-TATATATAATA
* *
281270 TTTGATAAATTAATAATTAATTTTAT
1 TTT-TTATATT-ATAATTAATTTTAT
281296 ACATATTTTG
Statistics
Matches: 56, Mismatches: 5, Indels: 7
0.82 0.07 0.10
Matches are distributed among these distances:
38 13 0.23
39 2 0.04
40 22 0.39
41 12 0.21
42 7 0.12
ACGTcount: A:0.38, C:0.02, G:0.03, T:0.57
Consensus pattern (39 bp):
TTTTTATATTATAATTAATTTTATGTCATATATATAATA
Found at i:282271 original size:19 final size:19
Alignment explanation
Indices: 282247--282290 Score: 70
Period size: 19 Copynumber: 2.3 Consensus size: 19
282237 TTTGTGTTAG
*
282247 AATTAAGTGATATTAACTC
1 AATTAAGTGACATTAACTC
*
282266 AATTAAGTGACATTAACTT
1 AATTAAGTGACATTAACTC
282285 AATTAA
1 AATTAA
282291 AAAAATTATA
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
19 23 1.00
ACGTcount: A:0.45, C:0.09, G:0.09, T:0.36
Consensus pattern (19 bp):
AATTAAGTGACATTAACTC
Found at i:282385 original size:13 final size:13
Alignment explanation
Indices: 282367--282391 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
282357 TATTTTAACT
282367 AAAAACTATTCAA
1 AAAAACTATTCAA
282380 AAAAACTATTCA
1 AAAAACTATTCA
282392 TTACTTTTTA
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.60, C:0.16, G:0.00, T:0.24
Consensus pattern (13 bp):
AAAAACTATTCAA
Found at i:282497 original size:19 final size:18
Alignment explanation
Indices: 282454--282500 Score: 58
Period size: 19 Copynumber: 2.5 Consensus size: 18
282444 ATTTTTAATT
* *
282454 TAATATTCTTTTTAGAATA
1 TAATATT-TTTTTAAAAAA
282473 TAATATTTTTTTAAAAAA
1 TAATATTTTTTTAAAAAA
282491 TATATATTTT
1 TA-ATATTTT
282501 CATCTACTTT
Statistics
Matches: 25, Mismatches: 2, Indels: 2
0.86 0.07 0.07
Matches are distributed among these distances:
18 11 0.44
19 14 0.56
ACGTcount: A:0.40, C:0.02, G:0.02, T:0.55
Consensus pattern (18 bp):
TAATATTTTTTTAAAAAA
Found at i:282692 original size:20 final size:19
Alignment explanation
Indices: 282655--282692 Score: 58
Period size: 19 Copynumber: 1.9 Consensus size: 19
282645 GGCTCAGGAT
*
282655 GAAGGGAAATTGCCTTCTG
1 GAAGGGAAATTCCCTTCTG
282674 GAAGGGAAATTTCCCTTCT
1 GAAGGGAAA-TTCCCTTCT
282693 TCCGAACCAT
Statistics
Matches: 17, Mismatches: 1, Indels: 1
0.89 0.05 0.05
Matches are distributed among these distances:
19 9 0.53
20 8 0.47
ACGTcount: A:0.26, C:0.18, G:0.26, T:0.29
Consensus pattern (19 bp):
GAAGGGAAATTCCCTTCTG
Found at i:283321 original size:32 final size:32
Alignment explanation
Indices: 283244--283328 Score: 86
Period size: 32 Copynumber: 2.6 Consensus size: 32
283234 TTTAAGGTAT
* * *
283244 TATATATATATATATAAATTTTGATAAGTTAA
1 TATATATATTTATATATATTTTGATAAATTAA
283276 TA-AT-TCATGTTATATATATTTTGA-AATATTAA
1 TATATAT-AT-TTATATATATTTTGATAA-ATTAA
283308 TATATATATTTATATTATATT
1 TATATATATTTATA-TATATT
283329 CGTATTATTT
Statistics
Matches: 44, Mismatches: 3, Indels: 11
0.76 0.05 0.19
Matches are distributed among these distances:
30 1 0.02
31 6 0.14
32 26 0.59
33 10 0.23
34 1 0.02
ACGTcount: A:0.42, C:0.01, G:0.05, T:0.52
Consensus pattern (32 bp):
TATATATATTTATATATATTTTGATAAATTAA
Found at i:284111 original size:3 final size:3
Alignment explanation
Indices: 284098--284131 Score: 59
Period size: 3 Copynumber: 11.0 Consensus size: 3
284088 TGTGTTTTCG
284098 ATT ATTT ATT ATT ATT ATT ATT ATT ATT ATT ATT
1 ATT A-TT ATT ATT ATT ATT ATT ATT ATT ATT ATT
284132 TATGTATAAA
Statistics
Matches: 30, Mismatches: 0, Indels: 2
0.94 0.00 0.06
Matches are distributed among these distances:
3 27 0.90
4 3 0.10
ACGTcount: A:0.32, C:0.00, G:0.00, T:0.68
Consensus pattern (3 bp):
ATT
Found at i:284197 original size:10 final size:9
Alignment explanation
Indices: 284167--284221 Score: 53
Period size: 8 Copynumber: 6.2 Consensus size: 9
284157 ATATATGTAC
*
284167 TAATATTAA
1 TAATATAAA
284176 TAATAT-AA
1 TAATATAAA
284184 TAATATAGAA
1 TAATATA-AA
*
284194 TAATATATA
1 TAATATAAA
284203 -AATAATAAA
1 TAAT-ATAAA
284212 TAA-ATAAA
1 TAATATAAA
284220 TA
1 TA
284222 TGTATTATAT
Statistics
Matches: 40, Mismatches: 2, Indels: 9
0.78 0.04 0.18
Matches are distributed among these distances:
8 18 0.45
9 11 0.28
10 11 0.28
ACGTcount: A:0.64, C:0.00, G:0.02, T:0.35
Consensus pattern (9 bp):
TAATATAAA
Found at i:284218 original size:32 final size:32
Alignment explanation
Indices: 284173--284240 Score: 77
Period size: 32 Copynumber: 2.1 Consensus size: 32
284163 GTACTAATAT
284173 TAATAATATAAT-AATATAGAATAATATATAAA
1 TAATAATATAATAAATAT-GAATAATATATAAA
* * *
284205 TAATAA-ATAAATAAATATGTATTATATATAAG
1 TAATAATAT-AATAAATATGAATAATATATAAA
284237 TAAT
1 TAAT
284241 TGTGTACTTA
Statistics
Matches: 31, Mismatches: 3, Indels: 4
0.82 0.08 0.11
Matches are distributed among these distances:
31 2 0.06
32 24 0.77
33 5 0.16
ACGTcount: A:0.59, C:0.00, G:0.04, T:0.37
Consensus pattern (32 bp):
TAATAATATAATAAATATGAATAATATATAAA
Found at i:290564 original size:29 final size:29
Alignment explanation
Indices: 290505--290564 Score: 66
Period size: 29 Copynumber: 2.1 Consensus size: 29
290495 TTTCATTCAA
* ** **
290505 TTTTTTTTTCAATTTTCCTTTCGTTTTTT
1 TTTTTTTTTCAATTTTCCGTTCCATACTT
*
290534 TTTTTTTTTGAATTTTCCGTTCCATACTT
1 TTTTTTTTTCAATTTTCCGTTCCATACTT
290563 TT
1 TT
290565 ACATTATGAT
Statistics
Matches: 25, Mismatches: 6, Indels: 0
0.81 0.19 0.00
Matches are distributed among these distances:
29 25 1.00
ACGTcount: A:0.10, C:0.15, G:0.05, T:0.70
Consensus pattern (29 bp):
TTTTTTTTTCAATTTTCCGTTCCATACTT
Found at i:292855 original size:3 final size:3
Alignment explanation
Indices: 292847--292890 Score: 81
Period size: 3 Copynumber: 15.0 Consensus size: 3
292837 TTACTAATCA
292847 TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TA- TAT TAT TAT TAT
1 TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT
292891 CTCAATAATA
Statistics
Matches: 40, Mismatches: 0, Indels: 2
0.95 0.00 0.05
Matches are distributed among these distances:
2 2 0.05
3 38 0.95
ACGTcount: A:0.34, C:0.00, G:0.00, T:0.66
Consensus pattern (3 bp):
TAT
Found at i:293268 original size:20 final size:20
Alignment explanation
Indices: 293243--293282 Score: 62
Period size: 20 Copynumber: 2.0 Consensus size: 20
293233 ACATAAAACA
293243 ATATTTTTAATTAAAATTAT
1 ATATTTTTAATTAAAATTAT
* *
293263 ATATTTTTATTTAAATTTAT
1 ATATTTTTAATTAAAATTAT
293283 TTATAAAATA
Statistics
Matches: 18, Mismatches: 2, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
20 18 1.00
ACGTcount: A:0.40, C:0.00, G:0.00, T:0.60
Consensus pattern (20 bp):
ATATTTTTAATTAAAATTAT
Found at i:294199 original size:2 final size:2
Alignment explanation
Indices: 294192--294222 Score: 62
Period size: 2 Copynumber: 15.5 Consensus size: 2
294182 AATTGAAATT
294192 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA T
1 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA T
294223 GCTTTTGAAA
Statistics
Matches: 29, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 29 1.00
ACGTcount: A:0.48, C:0.00, G:0.00, T:0.52
Consensus pattern (2 bp):
TA
Found at i:296162 original size:13 final size:13
Alignment explanation
Indices: 296141--296179 Score: 53
Period size: 13 Copynumber: 3.0 Consensus size: 13
296131 GTTTTTTATA
*
296141 AAAATATAATTTT
1 AAAAGATAATTTT
296154 AAAAGATAATTATT
1 AAAAGATAATT-TT
296168 -AAAGATAATTTT
1 AAAAGATAATTTT
296180 TTATATTTAA
Statistics
Matches: 24, Mismatches: 1, Indels: 3
0.86 0.04 0.11
Matches are distributed among these distances:
12 2 0.08
13 20 0.83
14 2 0.08
ACGTcount: A:0.54, C:0.00, G:0.05, T:0.41
Consensus pattern (13 bp):
AAAAGATAATTTT
Found at i:296169 original size:14 final size:14
Alignment explanation
Indices: 296136--296177 Score: 52
Period size: 13 Copynumber: 3.1 Consensus size: 14
296126 ATATAGTTTT
* *
296136 TTATAAAAATATAA
1 TTATTAAAAGATAA
296150 TT-TTAAAAGATAA
1 TTATTAAAAGATAA
296163 TTATT-AAAGATAA
1 TTATTAAAAGATAA
296176 TT
1 TT
296178 TTTTATATTT
Statistics
Matches: 25, Mismatches: 2, Indels: 3
0.83 0.07 0.10
Matches are distributed among these distances:
13 21 0.84
14 4 0.16
ACGTcount: A:0.55, C:0.00, G:0.05, T:0.40
Consensus pattern (14 bp):
TTATTAAAAGATAA
Found at i:297164 original size:2 final size:2
Alignment explanation
Indices: 297159--297187 Score: 51
Period size: 2 Copynumber: 15.0 Consensus size: 2
297149 TATTTTTTAA
297159 AT AT AT AT AT AT AT AT AT AT AT -T AT AT AT
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
297188 TAAAAAAAAG
Statistics
Matches: 26, Mismatches: 0, Indels: 2
0.93 0.00 0.07
Matches are distributed among these distances:
1 1 0.04
2 25 0.96
ACGTcount: A:0.48, C:0.00, G:0.00, T:0.52
Consensus pattern (2 bp):
AT
Found at i:298448 original size:27 final size:27
Alignment explanation
Indices: 298410--298484 Score: 105
Period size: 27 Copynumber: 2.8 Consensus size: 27
298400 AAATAATATG
*
298410 CCACCATTTTTGACAAATAAAAAGAAA
1 CCACCATTTTTGACAAACAAAAAGAAA
* * * *
298437 CCACTATTTTTGACAAACACAGAGTAA
1 CCACCATTTTTGACAAACAAAAAGAAA
298464 CCACCATTTTTGACAAACAAA
1 CCACCATTTTTGACAAACAAA
298485 GGGTGGCTTT
Statistics
Matches: 41, Mismatches: 7, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
27 41 1.00
ACGTcount: A:0.45, C:0.23, G:0.08, T:0.24
Consensus pattern (27 bp):
CCACCATTTTTGACAAACAAAAAGAAA
Found at i:302964 original size:24 final size:24
Alignment explanation
Indices: 302937--303028 Score: 76
Period size: 27 Copynumber: 3.6 Consensus size: 24
302927 TAGCCACAAA
*
302937 TTTTGACAAATAATATGCCACCAT
1 TTTTGACAAATAAAATGCCACCAT
* * *
302961 TTTTTATAAATAAAAAGAAACCACCAT
1 TTTTGACAAATAAAATG---CCACCAT
* *
302988 TTTTGACAAACACAAAGTAACCACCAT
1 TTTTGACAAATA-AAA-T-GCCACCAT
303015 TTTTGACAAATAAA
1 TTTTGACAAATAAA
303029 GGGTGGCTTT
Statistics
Matches: 52, Mismatches: 10, Indels: 10
0.72 0.14 0.14
Matches are distributed among these distances:
24 13 0.25
26 2 0.04
27 34 0.65
28 3 0.06
ACGTcount: A:0.46, C:0.18, G:0.07, T:0.29
Consensus pattern (24 bp):
TTTTGACAAATAAAATGCCACCAT
Found at i:302990 original size:27 final size:27
Alignment explanation
Indices: 302954--303028 Score: 105
Period size: 27 Copynumber: 2.8 Consensus size: 27
302944 AAATAATATG
* *
302954 CCACCATTTTTTATAAATAAAAAGAAA
1 CCACCATTTTTGACAAATAAAAAGAAA
* * *
302981 CCACCATTTTTGACAAACACAAAGTAA
1 CCACCATTTTTGACAAATAAAAAGAAA
303008 CCACCATTTTTGACAAATAAA
1 CCACCATTTTTGACAAATAAA
303029 GGGTGGCTTT
Statistics
Matches: 41, Mismatches: 7, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
27 41 1.00
ACGTcount: A:0.47, C:0.21, G:0.05, T:0.27
Consensus pattern (27 bp):
CCACCATTTTTGACAAATAAAAAGAAA
Found at i:306003 original size:123 final size:123
Alignment explanation
Indices: 305784--306033 Score: 482
Period size: 123 Copynumber: 2.0 Consensus size: 123
305774 CCTTGGTAAT
305784 CTAAATTTTTTCTTGGGAGTTAAGGTTATCTCTACAGCATCTGGTTTTGTTCTATCTCAATATAA
1 CTAAATTTTTTCTTGGGAGTTAAGGTTATCTCTACAGCATCTGGTTTTGTTCTATCTCAATATAA
305849 AAATAGTAGAAATCTTTTAAAAAATTTTGATATATCCAATGCAAAATATAACATTATG
66 AAATAGTAGAAATCTTTTAAAAAATTTTGATATATCCAATGCAAAATATAACATTATG
*
305907 CTAAATTTTTTCTTGGGAGTTGAGGTTATCTCTACAGCATCTGGTTTTGTTCTATCTCAATATAA
1 CTAAATTTTTTCTTGGGAGTTAAGGTTATCTCTACAGCATCTGGTTTTGTTCTATCTCAATATAA
*
305972 AAATAGTAGAAATCTTTTAGAAAATTTTGATATATCCAATGCAAAATATAACATTATG
66 AAATAGTAGAAATCTTTTAAAAAATTTTGATATATCCAATGCAAAATATAACATTATG
306030 CTAA
1 CTAA
306034 TTGCTAGAAG
Statistics
Matches: 125, Mismatches: 2, Indels: 0
0.98 0.02 0.00
Matches are distributed among these distances:
123 125 1.00
ACGTcount: A:0.35, C:0.12, G:0.13, T:0.40
Consensus pattern (123 bp):
CTAAATTTTTTCTTGGGAGTTAAGGTTATCTCTACAGCATCTGGTTTTGTTCTATCTCAATATAA
AAATAGTAGAAATCTTTTAAAAAATTTTGATATATCCAATGCAAAATATAACATTATG
Found at i:307002 original size:41 final size:42
Alignment explanation
Indices: 306937--307017 Score: 119
Period size: 41 Copynumber: 2.0 Consensus size: 42
306927 CATTTTCAAC
*
306937 TGTAAACTTAAGACTAGGATTAAGTTTTGTAAAATGATAAAA
1 TGTAAACTTAAGACTAGGATTAAGTTTGGTAAAATGATAAAA
* * *
306979 TGTAAACTTAATATTAGGA-TAAGTTTGGTAAAGTGATAA
1 TGTAAACTTAAGACTAGGATTAAGTTTGGTAAAATGATAA
307018 GCATGAGAAG
Statistics
Matches: 35, Mismatches: 4, Indels: 1
0.88 0.10 0.03
Matches are distributed among these distances:
41 18 0.51
42 17 0.49
ACGTcount: A:0.43, C:0.04, G:0.19, T:0.35
Consensus pattern (42 bp):
TGTAAACTTAAGACTAGGATTAAGTTTGGTAAAATGATAAAA
Found at i:309141 original size:4 final size:4
Alignment explanation
Indices: 309134--309160 Score: 54
Period size: 4 Copynumber: 6.8 Consensus size: 4
309124 TAGCCTGCAA
309134 AAAT AAAT AAAT AAAT AAAT AAAT AAA
1 AAAT AAAT AAAT AAAT AAAT AAAT AAA
309161 ATGGAAAAAA
Statistics
Matches: 23, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
4 23 1.00
ACGTcount: A:0.78, C:0.00, G:0.00, T:0.22
Consensus pattern (4 bp):
AAAT
Found at i:310086 original size:201 final size:199
Alignment explanation
Indices: 309676--310198 Score: 712
Period size: 201 Copynumber: 2.6 Consensus size: 199
309666 TTTAAATATT
309676 GAGATTATTTTATCAAACTTTTTAACCTAATCTTTATGAAAACATCAATATAAGGTGTCATAGAC
1 GAGATTATTTTATCAAACTTTTTAACCTAATCTTTATGAAAACAT-AATATAAGGTGTCATAGAC
* * *
309741 AATCATATACGACTATCTTTGTTTTTAAGGTATATGATTATAGAATTAATTTAAAAAAACAAAGA
65 AATCAAATACGCCTATCTTTGTTTTTAAGGTATATGATTATAGAATTAATTAAAAAAAACAAAGA
* * *
309806 AAAACATATATAATATATCTGAGTAAGAATTGTTCCATAAAAATTGATCCTTTAAAAAAAAAAAA
130 AAAACATATATAATATACCTCAGTAAGAATTGTTCCATAAAAAATGATCCTTTAAAAAAAAAAAA
*
309871 CTTTT
195 CTTTG
* *
309876 GAGATTATTTTATCAAACTTTTTAACCTAATCTTTATGACAACACTAATATAAGATTGTCATAGA
1 GAGATTATTTTATCAAACTTTTTAACCTAATCTTTATGAAAACA-TAATATAAG-GTGTCATAGA
* * *
309941 CAATCAAATACGCCTATCTTTGTTTTTTAGGTATATGATTATAGAATTACTTAAAAAATAAACAG
64 CAATCAAATACGCCTATCTTTGTTTTTAAGGTATATGATTATAGAATTAATT-AAAAA-AAACAA
**
310006 AGAAAAACATATATAATATACCTCAGTAAGAATTGTTCCATAAAAAAT-AT-CTTTTGAAAAAAA
127 AGAAAAACATATATAATATACCTCAGTAAGAATTGTTCCATAAAAAATGATCCTTTAAAAAAAAA
310069 AAACTTTG
192 AAACTTTG
* * ** *
310077 GATATTATTTAATCAAACTTTTTAACCTAATCTTTATGAAAACATTTTTATAAGGTGTCATAGAA
1 GAGATTATTTTATCAAACTTTTTAACCTAATCTTTATGAAAACA-TAATATAAGGTGTCATAGAC
* * * * * * *
310142 AATTAAATATGCTTATCATTGTTTTTGAGCGGT-T-TGATTTTTGAATTAATTAAAAAA
65 AATCAAATACGCCTATCTTTGTTTTT-A-AGGTATATGATTATAGAATTAATTAAAAAA
310199 TCCAATATAT
Statistics
Matches: 286, Mismatches: 31, Indels: 14
0.86 0.09 0.04
Matches are distributed among these distances:
198 1 0.00
199 5 0.02
200 96 0.34
201 125 0.44
202 9 0.03
203 50 0.17
ACGTcount: A:0.42, C:0.11, G:0.10, T:0.37
Consensus pattern (199 bp):
GAGATTATTTTATCAAACTTTTTAACCTAATCTTTATGAAAACATAATATAAGGTGTCATAGACA
ATCAAATACGCCTATCTTTGTTTTTAAGGTATATGATTATAGAATTAATTAAAAAAAACAAAGAA
AAACATATATAATATACCTCAGTAAGAATTGTTCCATAAAAAATGATCCTTTAAAAAAAAAAAAC
TTTG
Found at i:310208 original size:2 final size:2
Alignment explanation
Indices: 310203--310236 Score: 61
Period size: 2 Copynumber: 17.5 Consensus size: 2
310193 AAAAAATCCA
310203 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT -T AT A
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT A
310237 CCTGAGAGAG
Statistics
Matches: 31, Mismatches: 0, Indels: 2
0.94 0.00 0.06
Matches are distributed among these distances:
1 1 0.03
2 30 0.97
ACGTcount: A:0.50, C:0.00, G:0.00, T:0.50
Consensus pattern (2 bp):
AT
Found at i:311263 original size:10 final size:11
Alignment explanation
Indices: 311225--311294 Score: 56
Period size: 12 Copynumber: 6.3 Consensus size: 11
311215 CTTATGAGTC
311225 AAATTATAATTT
1 AAATT-TAATTT
*
311237 AAAATT--TTT
1 AAATTTAATTT
*
311246 AAATATTTATTT
1 AAAT-TTAATTT
311258 AAATTTAATTT
1 AAATTTAATTT
311269 -AATTTAATTCGT
1 AAATTTAATT--T
*
311281 AAATTTTATTT
1 AAATTTAATTT
311292 AAA
1 AAA
311295 AAATATTAAA
Statistics
Matches: 48, Mismatches: 4, Indels: 13
0.74 0.06 0.20
Matches are distributed among these distances:
9 6 0.12
10 11 0.23
11 11 0.23
12 12 0.25
13 8 0.17
ACGTcount: A:0.44, C:0.01, G:0.01, T:0.53
Consensus pattern (11 bp):
AAATTTAATTT
Found at i:312371 original size:14 final size:14
Alignment explanation
Indices: 312352--312379 Score: 56
Period size: 14 Copynumber: 2.0 Consensus size: 14
312342 AAGTAGTAGA
312352 TTTTAAATATATAT
1 TTTTAAATATATAT
312366 TTTTAAATATATAT
1 TTTTAAATATATAT
312380 ATATATATAT
Statistics
Matches: 14, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
14 14 1.00
ACGTcount: A:0.43, C:0.00, G:0.00, T:0.57
Consensus pattern (14 bp):
TTTTAAATATATAT
Found at i:313047 original size:19 final size:20
Alignment explanation
Indices: 313025--313065 Score: 57
Period size: 20 Copynumber: 2.1 Consensus size: 20
313015 ATTCATTATT
*
313025 ATTAATTT-TTTTAAAAAAA
1 ATTAATTTATTTCAAAAAAA
*
313044 ATTAATTTATTTCAATAAAA
1 ATTAATTTATTTCAAAAAAA
313064 AT
1 AT
313066 ATTTAATAAA
Statistics
Matches: 19, Mismatches: 2, Indels: 1
0.86 0.09 0.05
Matches are distributed among these distances:
19 8 0.42
20 11 0.58
ACGTcount: A:0.51, C:0.02, G:0.00, T:0.46
Consensus pattern (20 bp):
ATTAATTTATTTCAAAAAAA
Found at i:315680 original size:28 final size:28
Alignment explanation
Indices: 315648--315705 Score: 82
Period size: 28 Copynumber: 2.1 Consensus size: 28
315638 TTAAATTACG
* *
315648 TAATTATAAATAATTA-TATATTTTTTTA
1 TAATTATAAAT-ATTATTATAATTATTTA
315676 TAATTATAAATATTATTATAATTATTTA
1 TAATTATAAATATTATTATAATTATTTA
315704 TA
1 TA
315706 TTAAACATTA
Statistics
Matches: 27, Mismatches: 2, Indels: 2
0.87 0.06 0.06
Matches are distributed among these distances:
27 4 0.15
28 23 0.85
ACGTcount: A:0.45, C:0.00, G:0.00, T:0.55
Consensus pattern (28 bp):
TAATTATAAATATTATTATAATTATTTA
Found at i:315706 original size:18 final size:18
Alignment explanation
Indices: 315657--315708 Score: 68
Period size: 18 Copynumber: 2.9 Consensus size: 18
315647 GTAATTATAA
* *
315657 ATAATTATATATTTTTTT
1 ATAATTATATATATTATT
*
315675 ATAATTATAAATATTATT
1 ATAATTATATATATTATT
*
315693 ATAATTATTTATATTA
1 ATAATTATATATATTA
315709 AACATTAATA
Statistics
Matches: 29, Mismatches: 5, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
18 29 1.00
ACGTcount: A:0.42, C:0.00, G:0.00, T:0.58
Consensus pattern (18 bp):
ATAATTATATATATTATT
Found at i:317442 original size:14 final size:14
Alignment explanation
Indices: 317423--317467 Score: 60
Period size: 14 Copynumber: 3.4 Consensus size: 14
317413 ATTCAAAATT
317423 TTTTAAAAATATAA
1 TTTTAAAAATATAA
317437 TTTT-AAAA-ATAA
1 TTTTAAAAATATAA
317449 TTATTAAAAATAT-A
1 TT-TTAAAAATATAA
317463 TTTTA
1 TTTTA
317468 TTTTTAAAAT
Statistics
Matches: 28, Mismatches: 0, Indels: 7
0.80 0.00 0.20
Matches are distributed among these distances:
12 6 0.21
13 9 0.32
14 11 0.39
15 2 0.07
ACGTcount: A:0.53, C:0.00, G:0.00, T:0.47
Consensus pattern (14 bp):
TTTTAAAAATATAA
Found at i:317455 original size:13 final size:12
Alignment explanation
Indices: 317423--317467 Score: 54
Period size: 13 Copynumber: 3.4 Consensus size: 12
317413 ATTCAAAATT
317423 TTTTAAAAATATAA
1 TTTT-AAAA-ATAA
317437 TTTTAAAAATAA
1 TTTTAAAAATAA
317449 TTATTAAAAATATA
1 TT-TTAAAAATA-A
317463 TTTTA
1 TTTTA
317468 TTTTTAAAAT
Statistics
Matches: 29, Mismatches: 0, Indels: 5
0.85 0.00 0.15
Matches are distributed among these distances:
12 6 0.21
13 16 0.55
14 7 0.24
ACGTcount: A:0.53, C:0.00, G:0.00, T:0.47
Consensus pattern (12 bp):
TTTTAAAAATAA
Found at i:317841 original size:35 final size:35
Alignment explanation
Indices: 317795--317868 Score: 148
Period size: 35 Copynumber: 2.1 Consensus size: 35
317785 CAACTATTGC
317795 TTGAGTTATATAATAATAAGGATGTTCATTGAACT
1 TTGAGTTATATAATAATAAGGATGTTCATTGAACT
317830 TTGAGTTATATAATAATAAGGATGTTCATTGAACT
1 TTGAGTTATATAATAATAAGGATGTTCATTGAACT
317865 TTGA
1 TTGA
317869 AATAAGACGA
Statistics
Matches: 39, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
35 39 1.00
ACGTcount: A:0.36, C:0.05, G:0.18, T:0.41
Consensus pattern (35 bp):
TTGAGTTATATAATAATAAGGATGTTCATTGAACT
Found at i:318200 original size:21 final size:21
Alignment explanation
Indices: 318166--318205 Score: 64
Period size: 21 Copynumber: 1.9 Consensus size: 21
318156 TATTTTTATT
318166 TAAATTTAATTATAAAATATA
1 TAAATTTAATTATAAAATATA
318187 TAAATATTAA-TATAAAATA
1 TAAAT-TTAATTATAAAATA
318206 AATTTTTAAT
Statistics
Matches: 18, Mismatches: 0, Indels: 2
0.90 0.00 0.10
Matches are distributed among these distances:
21 14 0.78
22 4 0.22
ACGTcount: A:0.60, C:0.00, G:0.00, T:0.40
Consensus pattern (21 bp):
TAAATTTAATTATAAAATATA
Found at i:320220 original size:22 final size:24
Alignment explanation
Indices: 320195--320240 Score: 78
Period size: 22 Copynumber: 2.0 Consensus size: 24
320185 TTATTTCTAC
320195 ATAAAAAAATTAT-AAT-TTAAAA
1 ATAAAAAAATTATAAATATTAAAA
320217 ATAAAAAAATTATAAATATTAAAA
1 ATAAAAAAATTATAAATATTAAAA
320241 TTTAAATTTA
Statistics
Matches: 22, Mismatches: 0, Indels: 2
0.92 0.00 0.08
Matches are distributed among these distances:
22 13 0.59
23 3 0.14
24 6 0.27
ACGTcount: A:0.70, C:0.00, G:0.00, T:0.30
Consensus pattern (24 bp):
ATAAAAAAATTATAAATATTAAAA
Found at i:323875 original size:2 final size:2
Alignment explanation
Indices: 323868--323899 Score: 64
Period size: 2 Copynumber: 16.0 Consensus size: 2
323858 ATTAAAAAGA
323868 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
323900 TAATGTATTG
Statistics
Matches: 30, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 30 1.00
ACGTcount: A:0.50, C:0.00, G:0.00, T:0.50
Consensus pattern (2 bp):
AT
Found at i:328172 original size:13 final size:13
Alignment explanation
Indices: 328154--328178 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
328144 CATAAAGTGT
328154 TGTATCGATACAA
1 TGTATCGATACAA
328167 TGTATCGATACA
1 TGTATCGATACA
328179 TATTTTTTTG
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.36, C:0.16, G:0.16, T:0.32
Consensus pattern (13 bp):
TGTATCGATACAA
Found at i:328176 original size:33 final size:33
Alignment explanation
Indices: 328134--328200 Score: 98
Period size: 33 Copynumber: 2.0 Consensus size: 33
328124 TTCAACGATT
328134 TGTATCGATACATAAAGTGTTGTATCGATACAA
1 TGTATCGATACATAAAGTGTTGTATCGATACAA
*** *
328167 TGTATCGATACATATTTTTTTGTATCGATACAA
1 TGTATCGATACATAAAGTGTTGTATCGATACAA
328200 T
1 T
328201 TTAAGCTACT
Statistics
Matches: 30, Mismatches: 4, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
33 30 1.00
ACGTcount: A:0.33, C:0.12, G:0.15, T:0.40
Consensus pattern (33 bp):
TGTATCGATACATAAAGTGTTGTATCGATACAA
Found at i:328259 original size:13 final size:13
Alignment explanation
Indices: 328241--328265 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
328231 ATCACTTAAA
328241 TGTATCGATACAT
1 TGTATCGATACAT
328254 TGTATCGATACA
1 TGTATCGATACA
328266 CTGATCTTTG
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.32, C:0.16, G:0.16, T:0.36
Consensus pattern (13 bp):
TGTATCGATACAT
Found at i:331533 original size:20 final size:20
Alignment explanation
Indices: 331437--331535 Score: 101
Period size: 20 Copynumber: 4.8 Consensus size: 20
331427 AAAAACCTAG
* * *
331437 AATGTATCGATACAATGAGA
1 AATGTATCAATACATTTAGA
*
331457 AATGTATCTATACAATTGTA-A
1 AATGTATCAATAC-ATT-TAGA
*
331478 ATATGTATCAATACATTTAGT
1 A-ATGTATCAATACATTTAGA
*
331499 AATGTATCAATACATTTAGT
1 AATGTATCAATACATTTAGA
*
331519 AATGTATCGATACATTT
1 AATGTATCAATACATTT
331536 CCTTGGTAGT
Statistics
Matches: 69, Mismatches: 6, Indels: 8
0.83 0.07 0.10
Matches are distributed among these distances:
20 49 0.71
21 8 0.12
22 12 0.17
ACGTcount: A:0.40, C:0.10, G:0.12, T:0.37
Consensus pattern (20 bp):
AATGTATCAATACATTTAGA
Found at i:336026 original size:21 final size:23
Alignment explanation
Indices: 336002--336045 Score: 65
Period size: 21 Copynumber: 2.0 Consensus size: 23
335992 TTATTTTTGC
336002 ATAAAAAAATAT-AAT-TTAAAA
1 ATAAAAAAATATAAATATTAAAA
*
336023 ATAAAAAATTATAAATATTAAAA
1 ATAAAAAAATATAAATATTAAAA
336046 TTTAAATTTA
Statistics
Matches: 20, Mismatches: 1, Indels: 2
0.87 0.04 0.09
Matches are distributed among these distances:
21 11 0.55
22 3 0.15
23 6 0.30
ACGTcount: A:0.70, C:0.00, G:0.00, T:0.30
Consensus pattern (23 bp):
ATAAAAAAATATAAATATTAAAA
Found at i:338400 original size:21 final size:20
Alignment explanation
Indices: 338376--338418 Score: 50
Period size: 21 Copynumber: 2.1 Consensus size: 20
338366 TTTTTAAAAT
* *
338376 ATTTTATAAATTTATAATTTA
1 ATTTAATAAATTAAT-ATTTA
*
338397 ATTTAATTAATTAATATTTA
1 ATTTAATAAATTAATATTTA
338417 AT
1 AT
338419 AAATTTAAAA
Statistics
Matches: 19, Mismatches: 3, Indels: 1
0.83 0.13 0.04
Matches are distributed among these distances:
20 7 0.37
21 12 0.63
ACGTcount: A:0.44, C:0.00, G:0.00, T:0.56
Consensus pattern (20 bp):
ATTTAATAAATTAATATTTA
Found at i:338508 original size:21 final size:21
Alignment explanation
Indices: 338462--338513 Score: 52
Period size: 21 Copynumber: 2.4 Consensus size: 21
338452 TTTTTATCTT
*
338462 TAAATTATAATTTTTAATTAA
1 TAAATTATAATTTTAAATTAA
* *
338483 AAAATTA-AATTTTAAATATAC
1 TAAATTATAATTTTAAAT-TAA
338504 TAAATGTATA
1 TAAAT-TATA
338514 CCTACACATT
Statistics
Matches: 24, Mismatches: 4, Indels: 4
0.75 0.12 0.12
Matches are distributed among these distances:
20 9 0.38
21 12 0.50
22 2 0.08
23 1 0.04
ACGTcount: A:0.52, C:0.02, G:0.02, T:0.44
Consensus pattern (21 bp):
TAAATTATAATTTTAAATTAA
Found at i:338949 original size:15 final size:16
Alignment explanation
Indices: 338931--338963 Score: 50
Period size: 15 Copynumber: 2.1 Consensus size: 16
338921 GGCAAAATAC
*
338931 AAAATACAAAAAA-AA
1 AAAAAACAAAAAACAA
338946 AAAAAACAAAAAACAA
1 AAAAAACAAAAAACAA
338962 AA
1 AA
338964 CTTAAACAAA
Statistics
Matches: 16, Mismatches: 1, Indels: 1
0.89 0.06 0.06
Matches are distributed among these distances:
15 12 0.75
16 4 0.25
ACGTcount: A:0.88, C:0.09, G:0.00, T:0.03
Consensus pattern (16 bp):
AAAAAACAAAAAACAA
Found at i:340970 original size:2 final size:2
Alignment explanation
Indices: 340963--341008 Score: 83
Period size: 2 Copynumber: 23.0 Consensus size: 2
340953 TGGTAGGATA
*
340963 AT AT AT AT AT AT AT AT AT AT AT AC AT AT AT AT AT AT AT AT AT
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
341005 AT AT
1 AT AT
341009 CAATGTGTTG
Statistics
Matches: 42, Mismatches: 2, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
2 42 1.00
ACGTcount: A:0.50, C:0.02, G:0.00, T:0.48
Consensus pattern (2 bp):
AT
Found at i:344227 original size:32 final size:32
Alignment explanation
Indices: 344191--344359 Score: 115
Period size: 32 Copynumber: 5.2 Consensus size: 32
344181 ATAGACTTTG
* *
344191 AAAAGGTTGCCATTAACTCATGTGGGCTTTTA
1 AAAAGGTTACCATCAACTCATGTGGGCTTTTA
* * * * * *
344223 AAAAGG-TAGCTTCCAACTCGTGTGGACGTTTG
1 AAAAGGTTACCAT-CAACTCATGTGGGCTTTTA
* * * *
344255 AAAAGGTTATCACCAACTCATGTGAGCTTTGGA
1 AAAAGGTTACCATCAACTCATGTGGGCTTT-TA
* * * *
344288 AAAAAGTTACCATCAATTCATGTAGACTTTTA
1 AAAAGGTTACCATCAACTCATGTGGGCTTTTA
* * * * *
344320 AAAAAGTTACCACCAACTCGTGTGAGCTTTTG
1 AAAAGGTTACCATCAACTCATGTGGGCTTTTA
*
344352 TAAAGGTT
1 AAAAGGTT
344360 GCCACAAACT
Statistics
Matches: 100, Mismatches: 34, Indels: 6
0.71 0.24 0.04
Matches are distributed among these distances:
31 3 0.03
32 71 0.71
33 26 0.26
ACGTcount: A:0.32, C:0.17, G:0.20, T:0.31
Consensus pattern (32 bp):
AAAAGGTTACCATCAACTCATGTGGGCTTTTA
Found at i:344437 original size:31 final size:31
Alignment explanation
Indices: 344124--344987 Score: 522
Period size: 31 Copynumber: 27.8 Consensus size: 31
344114 GACTTGTGAG
* * *
344124 CTTTGAAAAGGCTGCCACCAACTCTTATGGA
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGA
* * * *
344155 CTTT-AACTATGG-TGTCACCAACTCGTATAGA
1 CTTTGAA--AAGGTTGCCACCAACTCGTGTGGA
** * *
344186 CTTTGAAAAGGTTGCCATTAACTCATGTGGG
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGA
* * **
344217 CTTTTAAAAAGGTAGCTTCCAACTCGTGTGGA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGA
** *
344249 CGTTTGAAAAGGTTATCACCAACTCATGT-GA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGA
* * * * * *
344280 GCTTTGGAAAAAAGTTACCATCAATTCATGTAGA
1 -CTTT-G-AAAAGGTTGCCACCAACTCGTGTGGA
* * *
344314 CTTTTAAAAAAGTTACCACCAACTCGTGT-GA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGA
* * *
344345 GCTTTTGTAAAGGTTGCCACAAACTTGTGTGGA
1 -C-TTTGAAAAGGTTGCCACCAACTCGTGTGGA
** * * **
344378 CTTTGACTATGATGCCACCAACTTATGTGGA
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGA
* * * *
344409 CTTTGAAAAGGTTACCACTAACTCATGTGGGT
1 CTTTGAAAAGGTTGCCACCAACTCGTGT-GGA
* ** * *
344441 TTTTGAAAATATTGCCACCAACTTGTATGGA
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGA
** * * *
344472 CTTTG-ACTGTGCTACCACCAACTCATGTGGA
1 CTTTGAAAAG-GTTGCCACCAACTCGTGTGGA
* *
344503 CTTTGAAAGGGTTGCCACCAACTCGTGTAGA
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGA
* * *
344534 CTTTGAAAAGGTTACCACCAACTCATGTAGA
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGA
*
344565 CTTTGAAAAAGGTTACCACCAACTCGTGTGGA
1 CTTTG-AAAAGGTTGCCACCAACTCGTGTGGA
* * *
344597 CTTTGAAAAGGTTGTCACCAACTCGTATAG-
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGA
* * * * *
344627 CTTTGAAAATGTTGGCACCGACTCGTGCGAGT
1 CTTTGAAAAGGTTGCCACCAACTCGTGTG-GA
* * * *
344659 TTTTGAAAAAGTTACCACCAACTTGTGTGGA
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGA
** *
344690 CTTTG-ACTGTGGTGCCACCAACTCGTGTGGA
1 CTTTGAAAAG-GTTGCCACCAACTCGTGTGGA
* * * * *
344721 CTTT-AAAAGGTTACCACCTACTCTTATGAA
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGA
* * * *
344751 CTTTGAAAATGTTGTCACCAACTTGTGTGGG
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGA
* * *
344782 CTTTTGAAAAGGTTGCCACTAACTCATGTGAA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGA
* *
344814 C--T---ATGG-TGCCACCAACTCGTGTGAA
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGA
* * *
344839 CTTTAAAAAGATTGCCACGAACTCGTGTGGA
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGA
* * * * * * *
344870 -TTTTAAATATGTTACCACTAACTTGTATGGG
1 CTTTGAAA-AGGTTGCCACCAACTCGTGTGGA
* *
344901 CTTTTGAAAAAGTAGCCACCAACTCGTGTGGA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGA
* * *
344933 CTTTGACTACGG-TGCCACCAACTC--ATGGA
1 CTTTGA-AAAGGTTGCCACCAACTCGTGTGGA
*
344962 CTTTGAAAAGGTTGCCACTAACTCGT
1 CTTTGAAAAGGTTGCCACCAACTCGT
344988 AAGTTGCCAT
Statistics
Matches: 631, Mismatches: 167, Indels: 70
0.73 0.19 0.08
Matches are distributed among these distances:
25 18 0.03
26 3 0.00
27 1 0.00
28 3 0.00
29 22 0.03
30 57 0.09
31 282 0.45
32 212 0.34
33 28 0.04
34 5 0.01
ACGTcount: A:0.29, C:0.21, G:0.21, T:0.30
Consensus pattern (31 bp):
CTTTGAAAAGGTTGCCACCAACTCGTGTGGA
Found at i:344445 original size:94 final size:94
Alignment explanation
Indices: 344295--344620 Score: 300
Period size: 94 Copynumber: 3.5 Consensus size: 94
344285 GGAAAAAAGT
* * * * * * * *
344295 TACCATCAATTCATGTAGACTTTTAAAAAAGTTACCACCAACTCGTGTGAGCTTTTGTAAAGGTT
1 TACCACCAACTCATGTGGAC-TTTGAAAAGGTTACCACCAACTCATGTGAGCTTTTGAAAAGATT
*
344360 GCCACAAACTTGTGTGGACTTTGACTATGA
65 GCCACAAACTTGTATGGACTTTGACTATGA
* * * * * *
344390 TGCCACCAACTTATGTGGACTTTGAAAAGGTTACCACTAACTCATGTGGGTTTTTGAAAATATTG
1 TACCACCAACTCATGTGGACTTTGAAAAGGTTACCACCAACTCATGTGAGCTTTTGAAAAGATTG
* * *
344455 CCACCAACTTGTATGGACTTTGACTGTGC
66 CCACAAACTTGTATGGACTTTGACTATGA
* * * *
344484 TACCACCAACTCATGTGGACTTTGAAAGGGTTGCCACCAACTCGTGT-AGAC-TTTGAAAAGGTT
1 TACCACCAACTCATGTGGACTTTGAAAAGGTTACCACCAACTCATGTGAG-CTTTTGAAAAGATT
* * ** * *
344547 ACCACCAACTCATGTA--GACTTTGAAAAAGGT
65 GCCACAAACT--TGTATGGACTTTG-ACTATGA
* **
344578 TACCACCAACTCGTGTGGACTTTGAAAAGGTTGTCACCAACTC
1 TACCACCAACTCATGTGGACTTTGAAAAGGTTACCACCAACTC
344621 GTATAGCTTT
Statistics
Matches: 190, Mismatches: 37, Indels: 9
0.81 0.16 0.04
Matches are distributed among these distances:
93 27 0.14
94 144 0.76
95 19 0.10
ACGTcount: A:0.29, C:0.21, G:0.19, T:0.30
Consensus pattern (94 bp):
TACCACCAACTCATGTGGACTTTGAAAAGGTTACCACCAACTCATGTGAGCTTTTGAAAAGATTG
CCACAAACTTGTATGGACTTTGACTATGA
Found at i:344606 original size:63 final size:62
Alignment explanation
Indices: 344124--348583 Score: 879
Period size: 63 Copynumber: 71.2 Consensus size: 62
344114 GACTTGTGAG
* * * * * *
344124 CTTTGAAAAGGCTGCCACCAACTCTTATGGACTTT-AACTATGGTGT--CACCAACTCGTATAGA
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGACTTTGAA--AAGGT-TACCACCAACTCATGTAGA
** * * * ** * *
344186 CTTTGAAAAGGTTGCCATTAACTCATGTGGGCTTTTAAAAAGG-TAGCTTCCAACTCGTGTGGA
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGAC-TTTGAAAAGGTTA-CCACCAACTCATGTAGA
** * * * *
344249 CGTTTGAAAAGGTTATCACCAACTCATGT-GAGCTTTGGAAAAAAGTTACCATCAATTCATGTAG
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGA-CTTT-G-AAAAGGTTACCACCAACTCATGTAG
344313 A
62 A
* * * * * * ** *
344314 CTTTTAAAAAAGTTACCACCAACTCGTGT-GAGCTTTTGTAAAGGTTGCCACAAACTTGTGTGGA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGA-C-TTTGAAAAGGTTACCACCAACTCATGTAGA
** * * ** * * *
344378 CTTTGACTATGATGCCACCAACTTATGTGGACTTTGAAAAGGTTACCACTAACTCATGTGGGT
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGACTTTGAAAAGGTTACCACCAACTCATGT-AGA
* ** * * ** * *
344441 TTTTGAAAATATTGCCACCAACTTGTATGGACTTTG-ACTGTGCTACCACCAACTCATGTGGA
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGACTTTGAAAAG-GTTACCACCAACTCATGTAGA
* *
344503 CTTTGAAAGGGTTGCCACCAACTCGTGTAGACTTTGAAAAGGTTACCACCAACTCATGTAGA
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGACTTTGAAAAGGTTACCACCAACTCATGTAGA
* ** * *
344565 CTTTGAAAAAGGTTACCACCAACTCGTGTGGACTTTGAAAAGGTTGTCACCAACTCGTATAG-
1 CTTTG-AAAAGGTTGCCACCAACTCGTGTGGACTTTGAAAAGGTTACCACCAACTCATGTAGA
* * * * ** * ** *
344627 CTTTGAAAATGTTGGCACCGACTCGTGCGAGTTTTTGAAAAAGTTACCACCAACTTGTGTGGA
1 CTTTGAAAAGGTTGCCACCAACTCGTGTG-GACTTTGAAAAGGTTACCACCAACTCATGTAGA
** * *
344690 CTTTG-ACTGTGGTGCCACCAACTCGTGTGGACTTT-AAAAGGTTACCACCTACTC-T-TATGAA
1 CTTTGAAAAG-GTTGCCACCAACTCGTGTGGACTTTGAAAAGGTTACCACCAACTCATGTA-G-A
* * * * * *
344751 CTTTGAAAATGTTGTCACCAACTTGTGTGGGCTTTTGAAAAGGTTGCCACTAACTCATGT-GAA
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGAC-TTTGAAAAGGTTACCACCAACTCATGTAG-A
* * * * * * * *
344814 C--T---ATGG-TGCCACCAACTCGTGTGAACTTTAAAAAGATTGCCACGAACTCGTGTGGA
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGACTTTGAAAAGGTTACCACCAACTCATGTAGA
* * * * * * * * * *
344870 -TTTTAAATATGTTACCACTAACTTGTATGGGCTTTTGAAAAAG-TAGCCACCAACTCGTGTGGA
1 CTTTGAAA-AGGTTGCCACCAACTCGTGTGGAC-TTTGAAAAGGTTA-CCACCAACTCATGTAGA
* * * * *
344933 CTTTGACTACGG-TGCCACCAACTC--ATGGACTTTGAAAAGGTTGCCACTAACTC--GTA-A
1 CTTTGA-AAAGGTTGCCACCAACTCGTGTGGACTTTGAAAAGGTTACCACCAACTCATGTAGA
* ** * * * *** ** * ** * * * * *
344990 -GTTG-CCA---T-CAACTC--GT-GT-AGATTTTGAAAAGGTTGCCATCAAC-TCGT-GTG-GG
1 CTTTGAAAAGGTTGCCAC-CAACTCGTGTGGACTTTGAAAAG--GTTACCACCAAC-TCATGTAG
*
345042 C
62 A
* * ** * * * * * *
345043 TTTTAAAAATATTGCCATCAACTCGTGTAGACTTTGAAAAGGATACCACCAAAC-CGTGTGGG
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGACTTTGAAAAGGTTACCACC-AACTCATGTAGA
* ** * * * ** ** *
345105 CTTTTAAAACGGTTGCCACCAACTAATGTGGGCTTTGAAAAGGTTATCACCAATTTGTGCGGG
1 CTTTGAAAA-GGTTGCCACCAACTCGTGTGGACTTTGAAAAGGTTACCACCAACTCATGTAGA
* * * * ** *
345168 CTTTTGAAAAGGTTGCCACCAATTCTTGTAGG-CTTTGAGAAGGTTGCCACCAACTTGTATAGA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGT-GGACTTTGAAAAGGTTACCACCAACTCATGTAGA
* * * * * * * *
345231 CTTTTGCAAAGGTTGCCACCAACTTGTGTGGGCTTTTGAAAAGGTTGCTACCAAGTCGTGCGAGA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGAC-TTTGAAAAGGTTACCACCAACTCATG-TAGA
* * * * * * * * * * *
345296 TTTTGAAAAGGTTGCCATCAACTCTTATGGGATTTTGAAAAGGTTGCTACCAGCTCGTGTGGG
1 CTTTGAAAAGGTTGCCACCAACTCGTGT-GGACTTTGAAAAGGTTACCACCAACTCATGTAGA
* * * * * ** ** *
345359 CTTTTGAAAAGGTTGCCAACAACTTGTGTGGACTCTAAAAAAGTTGTCACCAACTTGTGTGGGA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGACTTTGAAAAGGTTACCACCAACTCATGT-AGA
* * * * * * * * * *
345423 TTTTAAAAAGGCTGCCACCAACTCGTGTGGGATTTTGAAAATGTTGCTAACAACAT-GTGTGGA
1 CTTTGAAAAGGTTGCCACCAACTCGTGT-GGACTTTGAAAAGGTTACCACCAAC-TCATGTAGA
* * * * * * *
345486 CTTTGAAAAGGTTGTCACCTACTCATGTGGGATTTTGAAAAGTTTGCCACCAACGT-ATTTAGGA
1 CTTTGAAAAGGTTGCCACCAACTCGTGT-GGACTTTGAAAAGGTTACCACCAAC-TCATGTA-GA
* * * * * * ** *
345550 TTTTGAAAAGGTTACCACCAACTCATATAGG-CTTTTGAAAATGTTACCAACAACTTGTGTGGA
1 CTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC-TTTGAAAAGGTTACCACCAACTCATGTAGA
** * * * ** * *
345613 CTTTGAAAAGGTTGTTACCAACTC-TGTGGATTTTTGAAAAAGTTGCTGCCAACTCGTGTGCGA
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGA-CTTTGAAAAGGTTACCACCAACTCATGT-AGA
* * * * * * * ** *
345676 TTTTGAAAAGGTTACCATCAACTCGTGTGGGCTTTTGAAAAGGTTGCCAACAATTTGTGTTGA
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGAC-TTTGAAAAGGTTACCACCAACTCATGTAGA
* ** * * *
345739 CTTTGAAAAAGTTAACACCAACTCGTGTGGGCTTTTGAAAAGG-TAGCGACCAACTC-TCATAGA
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGAC-TTTGAAAAGGTTA-CCACCAACTCAT-GTAGA
* * * * *
345802 CTTTTGAAAAGGTTGTCACCAACTCGTGCGGGGCTTTTGAAAAGGTTATCACCAACTCGTGTGGA
1 C-TTTGAAAAGGTTGCCACCAACTCGTG-TGGAC-TTTGAAAAGGTTACCACCAACTCATGT--A
*
345867 CTTTTGGG
61 ------GA
* * ** * * * * *
345875 CTTTTGAAAATGTTGCAACCAACTCACGTGGACTTTGAAAAGGTTGCCATCAACTCGTGTGGG
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGACTTTGAAAAGGTTACCACCAACTCATGTAGA
* * * * * * * ** * * * *
345938 CTTTAAAAAAGGCTGCCACTAGCTCATGTGGGCTTTTGAAAAAGTGGCCATCAACTTATGTGCGG
1 CTTT-GAAAAGGTTGCCACCAACTCGTGTGGAC-TTTGAAAAGGTTACCACCAACTCATGT-AGA
* * * * ** * * ** *
346003 TTTTGAAAATGTTGCCACCAACTCATGTTGACTTTGACTATGTTGCCACCAACTTTTATAGA
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGACTTTGAAAAGGTTACCACCAACTCATGTAGA
* * * ** * * * * * *
346065 CTTTGAAAAAGTTCCCACCACCTCACGTGGGCTTCTAAAAATGTT---GCCAACTCGTGTGGA
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGACTT-TGAAAAGGTTACCACCAACTCATGTAGA
* * * * ** * * *
346125 CTTTGGATATGG-TACCACAAACTCGTGTAAACTTTGAAAAGGTTGCCACAAACTCATGTAGG
1 CTTT-GAAAAGGTTGCCACCAACTCGTGTGGACTTTGAAAAGGTTACCACCAACTCATGTAGA
* * ** * * * * * * *
346187 CTTTTAAAAAGGTTGCTACCAAGACATATGGATTTTTGAAATGGTTACCACCAACTCGTGTGGG
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGA-CTTTGAAAAGGTTACCACCAACTCATGTAGA
* * * * * * * * *
346251 CTTTCAAAAAGGTTACTACCAACTTGTGTCAGATTTTGAAAAGGTTGCCACCAACTCGTTTAGGA
1 CTTT-GAAAAGGTTGCCACCAACTCGTGT-GGACTTTGAAAAGGTTACCACCAACTCATGTA-GA
* * * * * * * **
346316 TTTTGAAAACGTTGCCACCAACACGTGTGGGCTTTTGAAAAGGTTGCTAACAACTTGTGTAGA
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGAC-TTTGAAAAGGTTACCACCAACTCATGTAGA
** * * * ** ** *
346379 CTTTGAAAAGGTTATCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAATTTTTACAAA
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGAC-TTTGAAAAGGTTACCACCAACTCATGTAGA
* * * *
346442 CTTTTGAAAAGGTAT-CCATCAACTTGTGTGGACTTTGAAATGGTTACCACCTACTTGTGTGGGC
1 C-TTTGAAAAGGT-TGCCACCAACTCGTGTGGACTTTGAAAAGGTTACCACCAAC-----T---C
* * * *
346506 TTTTGGG
56 ATGTAGA
* * * * * ** *
346513 CTTTTGAAAAGGTTGACACCAACTCTTATGGACTTTTG-AACGGTTGCCATTAACTCATGTGGA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGAC-TTTGAAAAGGTTACCACCAACTCATGTAGA
* * * * * * * ** *
346576 CTTTGAAATGGTTACCACTAATTCATGTGGATTTTTGAAAAGGTTGCCACCAACTTGTGTGGA
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGA-CTTTGAAAAGGTTACCACCAACTCATGTAGA
* * * * * * * * ** * * *
346639 TTTTTGAAAATGCTGCCACCAACTCCTATGGGCTTTTAAAAAGGTTACCAACAACTTGTTTGGG
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGAC-TTTGAAAAGGTTACCACCAACTCATGTAGA
* * * *
346703 CTTTCAAAAGGTTGCCACCAACTCGTGTGGACATTTGCAAAGCTTACCACTAACT-AGTGTA-A
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGAC-TTTGAAAAGGTTACCACCAACTCA-TGTAGA
* * * * * * * * *
346765 GCTTTTAAAAATGCTGCTACCAACTTGTGTGGGATTTTG-AAAGGTTGCCACCAACTCGTGTGGA
1 -C-TTTGAAAAGGTTGCCACCAACTCGTGT-GGACTTTGAAAAGGTTACCACCAACTCATGTAG-
346829 A
62 A
* * * * * * **
346830 TTTTGAAAAGGTTGCCACCAACTCGTATGGGCTTTTGAAAAGGTTGCCAACAGCTTGTGTAGA
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGAC-TTTGAAAAGGTTACCACCAACTCATGTAGA
* * * * *
346893 CTTTGAAACGGTTGTCACCAACTCATGTAGG--GTT-------TTA--A-CAA-TGCATGTGGGA
1 CTTTGAAAAGGTTGCCACCAACTCGTGT-GGACTTTGAAAAGGTTACCACCAACT-CATGT-AGA
* * * * ** * * * * * *
346945 TTTTGAAAATGTTACCACCAATTTATGTGGGCTTCTAAAAAGGTTGCCCCCCAACTCATTTGGA
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGACTT-TGAAAAGGTT-ACCACCAACTCATGTAGA
* * * * * * * * * *
347009 CTTTGACTATGG-TGCCACCAACTCGTATAGACGTTGGAAAGTTTGCCACAAACTCGTGTAGA
1 CTTTGA-AAAGGTTGCCACCAACTCGTGTGGACTTTGAAAAGGTTACCACCAACTCATGTAGA
*** * * * *
347071 CTTTGAAAAGGTTATTACCAATTCCTGTGGACTTTTGAAAAGGCTT-CCACTAACTCATGTGGA
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGAC-TTTGAAAAGG-TTACCACCAACTCATGTAGA
* * * * **
347134 CTTTGACTATA-G-TGCCACCAACACGTGTGGACTTTAAAAAGATTACCACCAACTCGGGT-GA
1 CTTTGA--AAAGGTTGCCACCAACTCGTGTGGACTTTGAAAAGGTTACCACCAACTCATGTAGA
* * * ** * * * * *
347195 CTTTGAAAAGGTTACGACTAACT--TGT--TTTTTGAAAAAGCTACCACTAACTCGTGTGGA
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGACTTTGAAAAGGTTACCACCAACTCATGTAGA
* * * * *
347253 CTTTGATAATGG-TGCCACTAACTCATGTGGACTTTAAAAAGGTTACCACTAACTC--GTA-A
1 CTTTGA-AAAGGTTGCCACCAACTCGTGTGGACTTTGAAAAGGTTACCACCAACTCATGTAGA
* ** * * *** ** *** ** * * * *
347312 -GTTG-CCA-----CCAAC-TCGT-GTG-GATTTTGAAAAGTTTGCCTCA-AACTCGT-GTG-GG
1 CTTTGAAAAGGTTGCCACCAAC-TCGTGTGGACTTTGAAAAGGTTAC-CACCA-AC-TCATGTAG
*
347364 C
62 A
* * ** * * * * *** ** * * * * *
347365 TTTTTAAAATATTACAC-CAACTCGT-GT-AGACTTTGAAAAGGTTACCACCAAC-A-T-GTGTA
1 CTTTGAAAAGGTTGC-CACCA-AC-TCGTGTGGACTTTGAAAAGGT--TACCACCAACTCATGTA
*
347424 GG
61 GA
* * * ** * * * *
347426 CTTTTGAAACGATTGCCACCAAATCAAGT-GAGCTTTGAAAAGGTTACCACCAATTCGTGTGGG
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGA-CTTTGAAAAGGTTACCACCAACTCATGTAGA
** * * * ** * * * *
347489 CTTTTGAAAAGGTTGCCATAAATTCCTGTAGG-CTATTGAAAAGGTTGCCAATAACTCGTTTGGG
1 C-TTTGAAAAGGTTGCCACCAACTCGTGT-GGACT-TTGAAAAGGTTACCACCAACTCATGTAGA
* * * * *
347553 CTTTGAAAAGGTTGCGACCAACTCGTATGGACTTTTGCAAAGGTTGCCACCAACTCATGTGGGA
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGAC-TTTGAAAAGGTTACCACCAACTCATGT-AGA
* * * * * ** *
347617 TTTTGAAAAGGTTGCCACCAACTAGTGTGGGCTTCTGAAAAGGTTGCCAACAACTTGTGTTGA
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGACTT-TGAAAAGGTTACCACCAACTCATGTAGA
* * * * * * * * *
347680 CTCTAAAAAGGTTGCCACTAATTTGTGTGGGATTTTAAAAAGGCTACCACCAACTCATGTGGGA
1 CTTTGAAAAGGTTGCCACCAACTCGTGT-GGACTTTGAAAAGGTTACCACCAACTCATGT-AGA
* * * * * ** * * *
347744 TTTTGAAAAAGTTGCTAACAACAT-GTGTGGACTTTGAAAATGTTGTCACCTACTCGTGTGGGA
1 CTTTGAAAAGGTTGCCACCAAC-TCGTGTGGACTTTGAAAAGGTTACCACCAACTCATGT-AGA
* * * * * * * * * *
347807 TTTTGAAATGTTTGCCACCAACGCATTTGGGATTTTGAAAAGGTTGCTACCAACTCATGTAGG
1 CTTTGAAAAGGTTGCCACCAACTCGTGT-GGACTTTGAAAAGGTTACCACCAACTCATGTAGA
* * * * * *** * * *
347870 CTTTTGAAAACGTTACCAACAACTTGTGTGGACTTTGAAAAAGTTGTTACCAACT-TTGTGGG
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGACTTTGAAAAGGTTACCACCAACTCATGTAGA
* * ** * * * * *
347932 TTTTGAAAAAGTTGCTGCCAACTCGTGTGCGATTTTGAAAAGGTTGCCATCAACTCGTGTTTG-
1 CTTTGAAAAGGTTGCCACCAACTCGTGTG-GACTTTGAAAAGGTTACCACCAACTCATG-TAGA
* * * * * * * * ** * *
347995 CTTTTAAAAAGGTTGTCACCAACTTGTGTTGACTTTGAAAAAGTTATCACTAATTCGCGTGGG
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGACTTTGAAAAGGTTACCACCAACTCATGTAGA
* * * * ** *
348058 CTTTTGAAAAGGTTGCGACCAACTC-TCATAGACTTTTGAAAAGGTTGCCACCAACTCATGCGGG
1 C-TTTGAAAAGGTTGCCACCAACTCGT-GTGGAC-TTTGAAAAGGTTACCACCAACTCATGTAGA
* ** * * *
348122 CTTTTAAAAAGGTTATCACCAACTCGTGTGGACTTTTGGGCTTTTAAAAATGTTGCAACCAACTC
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGAC-TTT--G------AAAAGGTTACCACCAACTC
*
348187 ATGTGGA
56 ATGTAGA
* ** * * * * * * *
348194 C-TTGAAAAGGTTGCCATCAACTTATGTGGGCTTTAGAAAAGGCTGCCATCAACTTATGTCGGG
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGACTTT-GAAAAGGTTACCACCAACTCATGT-AGA
* * * * * * ** *
348257 TTTTGAAAATGTTGCCACTAACTCATGTGGACTTTGATTATGGTGT--CACCAACTTTTATAGA
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGACTTTGA-AAAGGT-TACCACCAACTCATGTAGA
* * ** * * * ** * * *
348319 CTTTGAAAAGATTCCCACCAACTCACGTGGGCTTCTAAAAATGTT---GGCAACTCGTCTGGA
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGACTT-TGAAAAGGTTACCACCAACTCATGTAGA
** * * * * ** * *
348379 CTTTGGCTACGG-TGCTACAAACTCGTGTGAACTTTGAAAAGGTTGTCACAAACTCATGTAGG
1 CTTT-GAAAAGGTTGCCACCAACTCGTGTGGACTTTGAAAAGGTTACCACCAACTCATGTAGA
* * * * * * * * * *
348441 CTTTTAAAAAGGTTGCTACAAACACATGTGGATTTTTGAAATGGTTACCACCAACTCGTGTGGG
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGA-CTTTGAAAAGGTTACCACCAACTCATGTAGA
* * ** * * *
348505 CTTTTAAAAAGGTTGCTACCAACTCGTGTTAAATTTTGAAAAGGTTGCCACCAACTCGTGTAGGA
1 C-TTTGAAAAGGTTGCCACCAACTCGTG-TGGACTTTGAAAAGGTTACCACCAACTCATGTA-GA
*
348570 TTTTGAAAAGGTTG
1 CTTTGAAAAGGTTG
348584 TTGTAGACAC
Statistics
Matches: 3195, Mismatches: 961, Indels: 482
0.69 0.21 0.10
Matches are distributed among these distances:
50 19 0.01
51 17 0.01
52 35 0.01
53 3 0.00
54 7 0.00
55 2 0.00
56 27 0.01
57 40 0.01
58 26 0.01
59 29 0.01
60 101 0.03
61 132 0.04
62 481 0.15
63 1102 0.34
64 905 0.28
65 111 0.03
66 11 0.00
67 1 0.00
68 2 0.00
69 3 0.00
70 24 0.01
71 63 0.02
72 30 0.01
73 24 0.01
ACGTcount: A:0.28, C:0.19, G:0.22, T:0.31
Consensus pattern (62 bp):
CTTTGAAAAGGTTGCCACCAACTCGTGTGGACTTTGAAAAGGTTACCACCAACTCATGTAGA
Found at i:345451 original size:95 final size:94
Alignment explanation
Indices: 344998--348583 Score: 544
Period size: 95 Copynumber: 38.0 Consensus size: 94
344988 AAGTTGCCAT
* * * * * * * * ** *
344998 CAACTCGTGTAGATTTTGAAAAGGTTGCCATCAACTCGTGTGGGCTTTTAAAAATATTGCCATCA
1 CAACTTGTGTGGACTTTGAAAAGGTTGTCACCAACT-TTGTGGGATTTTGAAAAGGTTGCCACCA
* * * * * *
345063 ACTCGTGTAGAC-TTTGAAAAGGATACCAC
65 ACTCGTGTGGGCTTTTGAAAAGGTTGCTAA
* * * * * * **
345092 CAAAC-CGTGTGGGCTTTTAAAACGGTTGCCACCAACTAATGTGGG-CTTTGAAAAGGTTATCAC
1 C-AACTTGTGTGGACTTTGAAAA-GGTTGTCACCAACT-TTGTGGGATTTTGAAAAGGTTGCCAC
* * * * *
345155 CAATTTGTGCGGGCTTTTGAAAAGGTTGCCAC
63 CAACTCGTGTGGGCTTTTGAAAAGGTTGCTAA
* * * ** *
345187 CAATTCTTGT-AGG-CTTTGAGAAGGTTGCCACCAAC-TTGTATAGACTTTTGCAAAGGTTGCCA
1 CAA--CTTGTGTGGACTTTGAAAAGGTTGTCACCAACTTTGT-GGGA-TTTTGAAAAGGTTGCCA
* *
345249 CCAACTTGTGTGGGCTTTTGAAAAGGTTGCTAC
62 CCAACTCGTGTGGGCTTTTGAAAAGGTTGCTAA
* * * * * * * *
345282 CAAGTCGTGCGAGATTTTGAAAAGGTTGCCATCAACTCTTATGGGATTTTGAAAAGGTTGCTACC
1 CAACTTGTGTG-GACTTTGAAAAGGTTGTCACCAACT-TTGTGGGATTTTGAAAAGGTTGCCACC
* *
345347 AGCTCGTGTGGGCTTTTGAAAAGGTTGCCAA
64 AACTCGTGTGGGCTTTTGAAAAGGTTGCTAA
* * * * *
345378 CAACTTGTGTGGACTCTAAAAAAGTTGTCACCAACTTGTGTGGGATTTTAAAAAGGCTGCCACCA
1 CAACTTGTGTGGACTTTGAAAAGGTTGTCACCAACTT-TGTGGGATTTTGAAAAGGTTGCCACCA
* *
345443 ACTCGTGTGGGATTTTGAAAATGTTGCTAA
65 ACTCGTGTGGGCTTTTGAAAAGGTTGCTAA
* * * *
345473 CAACATGTGTGGACTTTGAAAAGGTTGTCACCTACTCATGTGGGATTTTGAAAAGTTTGCCACCA
1 CAACTTGTGTGGACTTTGAAAAGGTTGTCACCAACT-TTGTGGGATTTTGAAAAGGTTGCCACCA
* * * * * * *
345538 ACGT-ATTTAGGATTTTGAAAAGGTTACCAC
65 AC-TCGTGTGGGCTTTTGAAAAGGTTGCTAA
** * * ** * * **
345568 CAACTCATATAGG-CTTTTGAAAATGTTACCAACAAC-TTGTGTGGACTTTGAAAAGGTTGTTAC
1 CAACTTGTGT-GGAC-TTTGAAAAGGTTGTCACCAACTTTGTG-GGATTTTGAAAAGGTTGCCAC
** * **
345631 CAACTC-TGTGGATTTTTGAAAAAGTTGCTGC
63 CAACTCGTGTGGGCTTTTGAAAAGGTTGCTAA
* * ** * * * *
345662 CAACTCGTGTGCGATTTTGAAAAGGTTACCATCAACTCGTGTGGGCTTTTGAAAAGGTTGCCAAC
1 CAACTTGTGTG-GACTTTGAAAAGGTTGTCACCAACT-TTGTGGGATTTTGAAAAGGTTGCCACC
* * * * * * *
345727 AATTTGTGTTGAC-TTTGAAAAAGTTAAC-AC
64 AACTCGTGTGGGCTTTTGAAAAGGTT-GCTAA
* * * ** * *
345757 CAACTCGTGTGGGCTTTTGAAAAGGTAG-CGACCAACTCTCAT-AGACTTTTGAAAAGGTTGTCA
1 CAACTTGTGTGGAC-TTTGAAAAGGTTGTC-ACCAACT-TTGTGGGA-TTTTGAAAAGGTTGCCA
* * *
345820 CCAACTCGTGCGGGGCTTTTGAAAAGGTT-ATCAC
62 CCAACTCGTG-TGGGCTTTTGAAAAGGTTGCT-AA
* * ** *
345854 CAACTCGTGTGGACTTTTGGGCTTTTGAAAATGTTG-CAACCAACTCACGT-GGACTTTGAAAAG
1 CAACT--TGT-G-----TGGAC-TTTGAAAAGGTTGTC-ACCAACT-TTGTGGGATTTTGAAAAG
* ** * *
345917 GTTGCCATCAACTCGTGTGGGCTTTAAAAAAGGCTGC-CA
55 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCTAA
* ** * * * * * *
345956 CTAGCTCATGTGGGCTTTTGAAAAAGTGGCCATCAACTTATGTGCGG-TTTTGAAAATGTTGCCA
1 C-AACTTGTGTGGAC-TTTGAAAAGGTTGTCACCAACTT-TGTG-GGATTTTGAAAAGGTTGCCA
* * * ** * * *
346020 CCAACTCATGTTGAC-TTTGACTATGTTGCCAC
62 CCAACTCGTGTGGGCTTTTGAAAAGGTTGCTAA
* * * * ** * ** * * * *
346052 CAACTTTTATAGACTTTGAAAAAGTTCCCACCACCTCACGTGGGCTTCTAAAAATGTTG---CCA
1 CAACTTGTGTGGACTTTGAAAAGGTTGTCACCAACT-TTGTGGGATTTTGAAAAGGTTGCCACCA
* * * * * *
346114 ACTCGTGTGGACTTTGGATATGG-TAC-CA
65 ACTCGTGTGGGCTTTTGAAAAGGTTGCTAA
* ** * * * * * * *
346142 CAAACTCGTGTAAACTTTGAAAAGGTTGCCACAAACTCATGTAGGCTTTTAAAAAGGTTGCTACC
1 C-AACTTGTGTGGACTTTGAAAAGGTTGTCACCAACT-TTGTGGGATTTTGAAAAGGTTGCCACC
** * * ** * * * *
346207 AAGACATATGGATTTTTGAAATGGTTACCAC
64 AACTCGTGTGGGCTTTTGAAAAGGTTGCTAA
* * * * **
346238 CAACTCGTGTGGGCTTTCAAAAAGGTT-ACTACCAACTTGTGTCAGATTTTGAAAAGGTTGCCAC
1 CAACTTGTGTGGACTTT-GAAAAGGTTGTC-ACCAACTT-TGTGGGATTTTGAAAAGGTTGCCAC
* * * * * *
346302 CAACTCGTTTAGGATTTTGAAAACGTTGCCAC
63 CAACTCGTGTGGGCTTTTGAAAAGGTTGCTAA
** * * * * **
346334 CAACACGTGTGGGCTTTTGAAAAGGTTG-CTAACAAC-TTGTGTAGACTTTGAAAAGGTTATCAC
1 CAACTTGTGTGGAC-TTTGAAAAGGTTGTC-ACCAACTTTGTG-GGATTTTGAAAAGGTTGCCAC
* *
346397 CAACTCGTGTGGGCTTTTGAAAAGGTTGCCAC
63 CAACTCGTGTGGGCTTTTGAAAAGGTTGCTAA
* * **** * * * * *
346429 CAATTTTTACAAACTTTTGAAAAGGTAT-CCATCAAC-TTGTGTGGACTTTGAAATGGTTACCAC
1 CAACTTGTGTGGAC-TTTGAAAAGGT-TGTCACCAACTTTGTG-GGATTTTGAAAAGGTTGCCAC
* * *
346492 CTACTTGTGTGGGCTTTTGGGCTTTTGAAAAGGTTGAC-AC
63 CAAC-T-CGT--G----TGGGCTTTTGAAAAGGTTG-CTAA
* * * ** * * * *
346532 CAACTCT-TATGGACTTTTG-AACGGTTGCCATTAACTCATGT-GGACTTTGAAATGGTTACCAC
1 CAACT-TGTGTGGAC-TTTGAAAAGGTTGTCACCAACT-TTGTGGGATTTTGAAAAGGTTGCCAC
* * * ** * *
346594 TAATTCATGTGGATTTTTGAAAAGGTTGCCAC
63 CAACTCGTGTGGGCTTTTGAAAAGGTTGCTAA
* * * * * * * * * *
346626 CAACTTGTGTGGATTTTTGAAAATGCTGCCACCAACTCCTATGGGCTTTTAAAAAGGTTACCAAC
1 CAACTTGTGTGGA-CTTTGAAAAGGTTGTCACCAACT-TTGTGGGATTTTGAAAAGGTTGCCACC
* * * * *
346691 AACTTGTTTGGGC-TTTCAAAAGGTTGCCAC
64 AACTCGTGTGGGCTTTTGAAAAGGTTGCTAA
* * * ** * * ** * * * * *
346721 CAACTCGTGTGGACATTTGCAAAGCTTACCACTAACTAGTGTAAGCTTTTAAAAATGCTGCTACC
1 CAACTTGTGTGGAC-TTTGAAAAGGTTGTCACCAACT-TTGTGGGATTTTGAAAAGGTTGCCACC
* * * *
346786 AACTTGTGTGGGATTTTG-AAAGGTTGCCAC
64 AACTCGTGTGGGCTTTTGAAAAGGTTGCTAA
* * * * * * *
346816 CAACTCGTGTGGAATTTTGAAAAGGTTGCCACCAACTCGTATGGGCTTTTGAAAAGGTTGCCAAC
1 CAACTTGTGTGG-ACTTTGAAAAGGTTGTCACCAACT-TTGTGGGATTTTGAAAAGGTTGCCACC
* * * * * *
346881 AGCTTGTGTAGAC-TTTGAAACGGTTG-TCAC
64 AACTCGTGTGGGCTTTTGAAAAGGTTGCT-AA
** * * * *
346911 CAACTCATGTAGG-GTTTTAACAA---TG----C-A---TGTGGGATTTTGAAAATGTTACCACC
1 CAACTTGTGT-GGACTTTGAA-AAGGTTGTCACCAACTTTGTGGGATTTTGAAAAGGTTGCCACC
* ** * * ***
346964 AATTTATGTGGGCTTCTAAAAAGGTTGCCCCC
64 AACTCGTGTGGGCTTTTGAAAAGGTTG-CTAA
** * * * * * ** ** * * *
346996 CAACTCATTTGGACTTTGACTATGG-TGCCACCAAC-TCGTATAGACGTTGGAAAGTTTGCCACA
1 CAACTTGTGTGGACTTTGA-AAAGGTTGTCACCAACTTTGT-GGGATTTTGAAAAGGTTGCCACC
* * ** *
347059 AACTCGTGTAGAC-TTTGAAAAGGTTATTAC
64 AACTCGTGTGGGCTTTTGAAAAGGTTGCTAA
* * * * * *
347089 CAA-TTCCTGTGGACTTTTGAAAAGGCTT-CCACTAACTCATGT-GGACTTTGACTATA-G-TGC
1 CAACTT-GTGTGGAC-TTTGAAAAGG-TTGTCACCAACT-TTGTGGGATTTTGA--AAAGGTTGC
* * * * * * *
347149 CACCAACACGTGTGGAC-TTTAAAAAGATTACCAC
60 CACCAACTCGTGTGGGCTTTTGAAAAGGTTGCTAA
* * * * * * * * *
347183 CAACTCGGGT-GACTTTGAAAAGGTT-ACGACTAAC-TTGT---TTTTTGAAAAAGCTACCACTA
1 CAACTTGTGTGGACTTTGAAAAGGTTGTC-ACCAACTTTGTGGGATTTTGAAAAGGTTGCCACCA
* * *
347242 ACTCGTGTGGAC-TTTGATAATGG-TGC-CA
65 ACTCGTGTGGGCTTTTGA-AAAGGTTGCTAA
** * ** * *
347270 CTAACTCATGTGGACTTTAAAAAGG-T-T-ACC-AC----T---AACTCG-TAA-GTTGCCACCA
1 C-AACTTGTGTGGACTTTGAAAAGGTTGTCACCAACTTTGTGGGATTTTGAAAAGGTTGCCACCA
* * *
347322 ACTCGTGT-GGATTTTGAAAAGTTTGCCTCA
65 ACTCGTGTGGGCTTTTGAAAAGGTTG-CTAA
* * * ** * * * * *
347352 -AACTCGTGTGGGCTTTTTAAAATATT-ACACCAAC-TCGTGTAGACTTTGAAAAGGTTACCACC
1 CAACTTGTGTGGAC-TTTGAAAAGGTTGTCACCAACTTTGTG-GGATTTTGAAAAGGTTGCCACC
* * * * *
347414 AACAT-GTGTAGGCTTTTGAAACGATTGCCAC
64 AAC-TCGTGTGGGCTTTTGAAAAGGTTGCTAA
* *** ** * *
347445 CAAATCAAGT-GAGCTTTGAAAAGGTTACCACCAA-TTCGTGTGGGCTTTTGAAAAGGTTGCCAT
1 CAACTTGTGTGGA-CTTTGAAAAGGTTGTCACCAACTT--TGTGGGATTTTGAAAAGGTTGCCAC
* * * * * *
347508 AAATTCCTGTAGGCTATTGAAAAGGTTGCCAA
63 CAACTCGTGTGGGCTTTTGAAAAGGTTGCTAA
* * * * * * *
347540 TAACTCGTTTGGGCTTTGAAAAGGTTG-CGACCAAC-TCGTATGGACTTTTGCAAAGGTTGCCAC
1 CAACTTGTGTGGACTTTGAAAAGGTTGTC-ACCAACTTTGT-GGGA-TTTTGAAAAGGTTGCCAC
* * * *
347603 CAACTCATGTGGGATTTTGAAAAGGTTGCCAC
63 CAACTCGTGTGGGCTTTTGAAAAGGTTGCTAA
* * * * * * * * *
347635 CAACTAGTGTGGGCTTCTGAAAAGGTTGCCAACAAC-TTGTGTTGACTCTAAAAAGGTTGCCACT
1 CAACTTGTGTGGACTT-TGAAAAGGTTGTCACCAACTTTGTG-GGATTTTGAAAAGGTTGCCACC
* * * * * * * *
347699 AATTTGTGTGGGATTTTAAAAAGGCTACCAC
64 AACTCGTGTGGGCTTTTGAAAAGGTTGCTAA
* * * * * * *
347730 CAACTCATGTG-GGATTTTGAAAAAGTTG-CTAACAAC-ATGTGTGGACTTTGAAAATGTTGTCA
1 CAACT--TGTGTGGACTTTGAAAAGGTTGTC-ACCAACTTTGTG-GGATTTTGAAAAGGTTGCCA
* * * * * *
347792 CCTACTCGTGTGGGATTTTGAAATGTTTGCCAC
62 CCAACTCGTGTGGGCTTTTGAAAAGGTTGCTAA
* * * * * *
347825 CAACGCATT-TG-GGATTTTGAAAAGGTTG-CTACCAACTCATGTAGGCTTTTGAAAACGTTACC
1 CAA--C-TTGTGTGGACTTTGAAAAGGTTGTC-ACCAACT-TTGTGGGATTTTGAAAAGGTTGCC
* * * * * *
347887 AACAACTTGTGTGGAC-TTTGAAAAAGTTGTTAC
61 ACCAACTCGTGTGGGCTTTTGAAAAGGTTGCTAA
** * * * * *
347920 CAACTT-TGTGGGTTTTGAAAAAGTTG-CTGCCAACTCGTGTGCGATTTTGAAAAGGTTGCCATC
1 CAACTTGTGTGGACTTTGAAAAGGTTGTC-ACCAACT-TTGTGGGATTTTGAAAAGGTTGCCACC
** * *
347983 AACTCGTGTTTGCTTTTAAAAAGGTTG-TCAC
64 AACTCGTGTGGGCTTTTGAAAAGGTTGCT-AA
* * * * * * *
348014 CAACTTGTGTTGACTTTGAAAAAGTTATCACTAA-TTCGCGTGGGCTTTTGAAAAGGTTGCGACC
1 CAACTTGTGTGGACTTTGAAAAGGTTGTCACCAACTT--TGTGGGATTTTGAAAAGGTTGCCACC
* * * * *
348078 AACTC-TCATAGACTTTTGAAAAGGTTGCCAC
64 AACTCGT-GTGGGCTTTTGAAAAGGTTGCTAA
** * * * * * * *
348109 CAACTCATGCGGGCTTTTAAAAAGGTTATCACCAACTCGTGTGGACTTTTGGGCTTTTAAAAATG
1 CAACTTGTGTGGAC-TTTGAAAAGGTTGTCACCAACT--T-T-G-----TGGGATTTTGAAAAGG
* * * * *
348174 TTGCAACCAACTCATGTGGAC--TTGAAAAGGTTGCCAT
56 TTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCTAA
* * * * * *
348211 CAACTTATGTGGGCTTTAGAAAAGGCTGCCATCAACTTATGTCGGG-TTTTGAAAATGTTGCCAC
1 CAACTTGTGTGGACTTT-GAAAAGGTTGTCACCAACTT-TGT-GGGATTTTGAAAAGGTTGCCAC
* * * * * *
348275 TAACTCATGTGGAC-TTTGATTATGG-TG-TCAC
63 CAACTCGTGTGGGCTTTTGA-AAAGGTTGCT-AA
* * * * ** ** * * * * *
348306 CAACTTTTATAGACTTTGAAAAGATTCCCACCAACTCACGTGGGCTTCTAAAAATGTTG---GCA
1 CAACTTGTGTGGACTTTGAAAAGGTTGTCACCAACT-TTGTGGGATTTTGAAAAGGTTGCCACCA
* * * ** *
348368 ACTCGTCTGGACTTTGGCTACGG-TGCT-A
65 ACTCGTGTGGGCTTTTGAAAAGGTTGCTAA
* * * * * * * * *
348396 CAAACTCGTGTGAACTTTGAAAAGGTTGTCACAAACTCATGTAGGCTTTTAAAAAGGTTGCTACA
1 C-AACTTGTGTGGACTTTGAAAAGGTTGTCACCAACT-TTGTGGGATTTTGAAAAGGTTGCCACC
* * ** * * * *
348461 AACACATGTGGATTTTTGAAATGGTTACCAC
64 AACTCGTGTGGGCTTTTGAAAAGGTTGCTAA
* * * * ***
348492 CAACTCGTGTGGGCTTTTAAAAAGGTTG-CTACCAACTCGTGTTAAATTTTGAAAAGGTTGCCAC
1 CAACTTGTGTGGAC-TTTGAAAAGGTTGTC-ACCAACT-TTGTGGGATTTTGAAAAGGTTGCCAC
* *
348556 CAACTCGTGTAGGATTTTGAAAAGGTTG
63 CAACTCGTGTGGGCTTTTGAAAAGGTTG
348584 TTGTAGACAC
Statistics
Matches: 2603, Mismatches: 689, Indels: 398
0.71 0.19 0.11
Matches are distributed among these distances:
79 4 0.00
80 33 0.01
81 10 0.00
82 6 0.00
83 32 0.01
84 14 0.01
85 17 0.01
86 4 0.00
87 6 0.00
88 37 0.01
89 15 0.01
90 5 0.00
91 130 0.05
92 38 0.01
93 111 0.04
94 396 0.15
95 1077 0.41
96 389 0.15
97 39 0.01
98 6 0.00
99 6 0.00
100 5 0.00
101 6 0.00
102 76 0.03
103 51 0.02
104 59 0.02
105 31 0.01
ACGTcount: A:0.28, C:0.19, G:0.22, T:0.31
Consensus pattern (94 bp):
CAACTTGTGTGGACTTTGAAAAGGTTGTCACCAACTTTGTGGGATTTTGAAAAGGTTGCCACCAA
CTCGTGTGGGCTTTTGAAAAGGTTGCTAA
Found at i:345791 original size:32 final size:32
Alignment explanation
Indices: 344990--346916 Score: 1171
Period size: 32 Copynumber: 60.4 Consensus size: 32
344980 TAACTCGTAA
* * *
344990 GTTGCCATCAACTCGTGT-AGATTTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * *
345021 GTTGCCATCAACTCGTGTGGGCTTTTAAAAAT
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * * *
345053 ATTGCCATCAACTCGTGTAGAC-TTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* *
345084 GATACCACCAAAC-CGTGTGGGCTTTT-AAAACG
1 GTTGCCACC-AACTCGTGTGGGCTTTTGAAAA-G
**
345116 GTTGCCACCAACTAATGTGGGC-TTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
** * * *
345147 GTTATCACCAATTTGTGCGGGCTTTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * * *
345179 GTTGCCACCAATTCTTGTAGGC-TTTGAGAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * * * *
345210 GTTGCCACCAACTTGTATAGACTTTTGCAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
*
345242 GTTGCCACCAACTTGTGTGGGCTTTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * * * *
345274 GTTGCTACCAAGTCGTGCGAGATTTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * * *
345306 GTTGCCATCAACTCTTATGGGATTTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* *
345338 GTTGCTACCAGCTCGTGTGGGCTTTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * * * * *
345370 GTTGCCAACAACTTGTGTGGAC-TCTAAAAAA
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * * *
345401 GTTGTCACCAACTTGTGTGGGATTTTAAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * *
345433 GCTGCCACCAACTCGTGTGGGATTTTGAAAAT
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * *
345465 GTTGCTAACAACAT-GTGTGGAC-TTTGAAAAG
1 GTTGCCACCAAC-TCGTGTGGGCTTTTGAAAAG
* * * *
345496 GTTGTCACCTACTCATGTGGGATTTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * * * *
345528 TTTGCCACCAACGT-ATTTAGGATTTTGAAAAG
1 GTTGCCACCAAC-TCGTGTGGGCTTTTGAAAAG
* * * * *
345560 GTTACCACCAACTCATATAGGCTTTTGAAAAT
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * * *
345592 GTTACCAACAACTTGTGTGGAC-TTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
** ** *
345623 GTTGTTACCAACTC-TGTGGATTTTTGAAAAA
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
** * *
345654 GTTGCTGCCAACTCGTGTGCGATTTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* *
345686 GTTACCATCAACTCGTGTGGGCTTTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * * * * *
345718 GTTGCCAACAATTTGTGTTGAC-TTTGAAAAA
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
**
345749 GTTAACACCAACTCGTGTGGGCTTTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * * * *
345781 GTAGCGACCAACTC-TCATAGACTTTTGAAAAG
1 GTTGCCACCAACTCGT-GTGGGCTTTTGAAAAG
* *
345813 GTTGTCACCAACTCGTGCGGGGCTTTTGAAAAG
1 GTTGCCACCAACTCGTG-TGGGCTTTTGAAAAG
** *
345846 GTTATCACCAACTCGTGTGGACTTTTGGGCTTTTGAAAAT
1 GTTGCCACCAACTC--GT-G-----TGGGCTTTTGAAAAG
* ** *
345886 GTTGCAACCAACTCACGTGGAC-TTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* **
345917 GTTGCCATCAACTCGTGTGGGCTTTAAAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * * * *
345949 GCTGCCACTAGCTCATGTGGGCTTTTGAAAAA
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * ** *
345981 GTGGCCATCAACTTATGTGCGG-TTTTGAAAAT
1 GTTGCCACCAACTCGTGTG-GGCTTTTGAAAAG
* * * ** *
346013 GTTGCCACCAACTCATGTTGAC-TTTGACTAT
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
** * * * *
346044 GTTGCCACCAACTTTTATAGAC-TTTGAAAAA
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * ** * * *
346075 GTTCCCACCACCTCACGTGGGCTTCTAAAAAT
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * * *
346107 GTTG---CCAACTCGTGTGGACTTTGGATATG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * ***
346136 G-TACCACAAACTCGTGTAAAC-TTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * * *
346166 GTTGCCACAAACTCATGTAGGCTTTTAAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* ** * * ** *
346198 GTTGCTACCAAGACATATGGATTTTTGAAATG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* **
346230 GTTACCACCAACTCGTGTGGGCTTTCAAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * * ** *
346262 GTTACTACCAACTTGTGTCAGATTTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * * *
346294 GTTGCCACCAACTCGTTTAGGATTTTGAAAAC
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
*
346326 GTTGCCACCAACACGTGTGGGCTTTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * * * *
346358 GTTGCTAACAACTTGTGTAGAC-TTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
**
346389 GTTATCACCAACTCGTGTGGGCTTTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* ** *****
346421 GTTGCCACCAATTTTTACAAACTTTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * * *
346453 GTAT-CCATCAACTTGTGTGGAC-TTTGAAATG
1 GT-TGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * *
346484 GTTACCACCTACTTGTGTGGGCTTTTGGGCTTTTGAAAAG
1 GTTGCCACCAAC-T-CGT--G----TGGGCTTTTGAAAAG
* * * * *
346524 GTTGACACCAACTCTTATGGACTTTTG-AACG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
** * * *
346555 GTTGCCATTAACTCATGTGGAC-TTTGAAATG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * * * **
346586 GTTACCACTAATTCATGTGGATTTTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* ** *
346618 GTTGCCACCAACTTGTGTGGATTTTTGAAAAT
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * * *
346650 GCTGCCACCAACTCCTATGGGCTTTTAAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * * * *
346682 GTTACCAACAACTTGTTTGGGC-TTTCAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * *
346713 GTTGCCACCAACTCGTGTGGACATTTGCAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * * * ** * *
346745 CTTACCACTAACTAGTGTAAGCTTTTAAAAAT
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * * *
346777 GCTGCTACCAACTTGTGTGGGATTTTG-AAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
**
346808 GTTGCCACCAACTCGTGTGGAATTTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
*
346840 GTTGCCACCAACTCGTATGGGCTTTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * * * * *
346872 GTTGCCAACAGCTTGTGTAGAC-TTTGAAACG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
*
346903 GTTGTCACCAACTC
1 GTTGCCACCAACTC
346917 ATGTAGGGTT
Statistics
Matches: 1442, Mismatches: 402, Indels: 104
0.74 0.21 0.05
Matches are distributed among these distances:
28 1 0.00
29 16 0.01
30 19 0.01
31 445 0.31
32 875 0.61
33 34 0.02
35 3 0.00
36 1 0.00
37 1 0.00
38 1 0.00
39 5 0.00
40 41 0.03
ACGTcount: A:0.28, C:0.19, G:0.22, T:0.31
Consensus pattern (32 bp):
GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
Found at i:345896 original size:40 final size:40
Alignment explanation
Indices: 345832--345910 Score: 106
Period size: 40 Copynumber: 2.0 Consensus size: 40
345822 AACTCGTGCG
* **
345832 GGGCTTTTGAAAAGGTTATCACCAACTCGTGTGGACTTTT
1 GGGCTTTTGAAAAGGTTAGCACCAACTCACGTGGACTTTT
*
345872 GGGCTTTTGAAAATGTT-GCAACCAACTCACGTGGACTTT
1 GGGCTTTTGAAAAGGTTAGC-ACCAACTCACGTGGACTTT
345911 GAAAAGGTTG
Statistics
Matches: 34, Mismatches: 4, Indels: 2
0.85 0.10 0.05
Matches are distributed among these distances:
39 1 0.03
40 33 0.97
ACGTcount: A:0.24, C:0.19, G:0.24, T:0.33
Consensus pattern (40 bp):
GGGCTTTTGAAAAGGTTAGCACCAACTCACGTGGACTTTT
Found at i:346612 original size:102 final size:103
Alignment explanation
Indices: 346406--346612 Score: 249
Period size: 102 Copynumber: 2.0 Consensus size: 103
346396 CCAACTCGTG
* * * **
346406 TGGGCTTTTGAAAAGGTTGCCACCAATTTTTACAAACTTTTGAAAAGGTATCCATCAACTTGTGT
1 TGGGCTTTTGAAAAGGTTGACACCAACTCTTACAAACTTTTGAAAAGGTATCCATCAACTCATGT
* * *
346471 GGACTTTGAAATGGTTACCACCTACTTGTGTGGGCTTT
66 GGACTTTGAAATGGTTACCACCTAATTATGTGGACTTT
*** * *
346509 TGGGCTTTTGAAAAGGTTGACACCAACTCTTATGGACTTTTG-AACGGT-TGCCATTAACTCATG
1 TGGGCTTTTGAAAAGGTTGACACCAACTCTTACAAACTTTTGAAAAGGTAT-CCATCAACTCATG
*
346572 TGGACTTTGAAATGGTTACCA-CTAATTCATGTGGATTTT
65 TGGACTTTGAAATGGTTACCACCTAATT-ATGTGGACTTT
346611 TG
1 TG
346613 AAAAGGTTGC
Statistics
Matches: 88, Mismatches: 14, Indels: 5
0.82 0.13 0.05
Matches are distributed among these distances:
101 6 0.07
102 46 0.52
103 36 0.41
ACGTcount: A:0.25, C:0.17, G:0.22, T:0.36
Consensus pattern (103 bp):
TGGGCTTTTGAAAAGGTTGACACCAACTCTTACAAACTTTTGAAAAGGTATCCATCAACTCATGT
GGACTTTGAAATGGTTACCACCTAATTATGTGGACTTT
Found at i:347056 original size:31 final size:31
Alignment explanation
Indices: 347021--347080 Score: 84
Period size: 31 Copynumber: 1.9 Consensus size: 31
347011 TTGACTATGG
* *
347021 TGCCACCAACTCGTATAGACGTTGGAAAGTT
1 TGCCACAAACTCGTATAGACGTTGAAAAGTT
* *
347052 TGCCACAAACTCGTGTAGACTTTGAAAAG
1 TGCCACAAACTCGTATAGACGTTGAAAAG
347081 GTTATTACCA
Statistics
Matches: 25, Mismatches: 4, Indels: 0
0.86 0.14 0.00
Matches are distributed among these distances:
31 25 1.00
ACGTcount: A:0.32, C:0.22, G:0.22, T:0.25
Consensus pattern (31 bp):
TGCCACAAACTCGTATAGACGTTGAAAAGTT
Found at i:347204 original size:30 final size:31
Alignment explanation
Indices: 347148--347209 Score: 81
Period size: 30 Copynumber: 2.0 Consensus size: 31
347138 GACTATAGTG
*
347148 CCACCAACACGTGTGGACTTTAAAAAGATTA
1 CCACCAACACGGGTGGACTTTAAAAAGATTA
* * *
347179 CCACCAACTCGGGT-GACTTTGAAAAGGTTA
1 CCACCAACACGGGTGGACTTTAAAAAGATTA
347209 C
1 C
347210 GACTAACTTG
Statistics
Matches: 27, Mismatches: 4, Indels: 1
0.84 0.12 0.03
Matches are distributed among these distances:
30 15 0.56
31 12 0.44
ACGTcount: A:0.34, C:0.24, G:0.19, T:0.23
Consensus pattern (31 bp):
CCACCAACACGGGTGGACTTTAAAAAGATTA
Found at i:347271 original size:31 final size:31
Alignment explanation
Indices: 347054--347309 Score: 145
Period size: 31 Copynumber: 8.4 Consensus size: 31
347044 GGAAAGTTTG
* * *
347054 CCACAAACTCGTGTAGACTTTGAAAAGGTTA
1 CCACTAACTCGTGTGGACTTTAAAAAGGTTA
** * * * *
347085 TTACCAATTCCTGTGGACTTTTGAAAAGGCTT-
1 CCACTAACTCGTGTGGAC-TTTAAAAAGG-TTA
* * * *
347117 CCACTAACTCATGTGGACTTTGACTATA-G-TG
1 CCACTAACTCGTGTGGACTTT-A-AAAAGGTTA
* * *
347148 CCACCAACACGTGTGGACTTTAAAAAGATTA
1 CCACTAACTCGTGTGGACTTTAAAAAGGTTA
* * *
347179 CCACCAACTCGGGT-GACTTTGAAAAGGTTA
1 CCACTAACTCGTGTGGACTTTAAAAAGGTTA
* ** *
347209 CGACTAACT--TGT--TTTTTGAAAAA-GCTA
1 CCACTAACTCGTGTGGACTTT-AAAAAGGTTA
* * *
347236 CCACTAACTCGTGTGGACTTTGATAATGG-TG
1 CCACTAACTCGTGTGGACTTT-AAAAAGGTTA
*
347267 CCACTAACTCATGTGGACTTTAAAAAGGTTA
1 CCACTAACTCGTGTGGACTTTAAAAAGGTTA
347298 CCACTAACTCGT
1 CCACTAACTCGT
347310 AAGTTGCCAC
Statistics
Matches: 168, Mismatches: 43, Indels: 28
0.70 0.18 0.12
Matches are distributed among these distances:
27 14 0.08
28 6 0.04
29 5 0.03
30 28 0.17
31 86 0.51
32 25 0.15
33 4 0.02
ACGTcount: A:0.30, C:0.21, G:0.19, T:0.30
Consensus pattern (31 bp):
CCACTAACTCGTGTGGACTTTAAAAAGGTTA
Found at i:347356 original size:49 final size:49
Alignment explanation
Indices: 347265--347358 Score: 116
Period size: 49 Copynumber: 1.9 Consensus size: 49
347255 TTGATAATGG
* *
347265 TGCCACTAACTCATGTGGACTTTAAAAAGGTTACCACTAACTCGTAAGT
1 TGCCACCAACTCATGTGGACTTTAAAAAGGTTACCACAAACTCGTAAGT
* * * * * *
347314 TGCCACCAACTCGTGTGGATTTTGAAAAGTTTGCCTCAAACTCGT
1 TGCCACCAACTCATGTGGACTTTAAAAAGGTTACCACAAACTCGT
347359 GTGGGCTTTT
Statistics
Matches: 37, Mismatches: 8, Indels: 0
0.82 0.18 0.00
Matches are distributed among these distances:
49 37 1.00
ACGTcount: A:0.29, C:0.23, G:0.18, T:0.30
Consensus pattern (49 bp):
TGCCACCAACTCATGTGGACTTTAAAAAGGTTACCACAAACTCGTAAGT
Found at i:347445 original size:32 final size:31
Alignment explanation
Indices: 347316--347681 Score: 128
Period size: 32 Copynumber: 11.6 Consensus size: 31
347306 TCGTAAGTTG
* * * *
347316 CCACCAACTCGTGTGGATTTTGAAAAGTTTG
1 CCACCAACTCGTGTAGACTTTGAAAAGATTA
* * * * * *
347347 CCTCAAACTCGTGTGGGCTTTTTAAAATATTA
1 CCACCAACTCGTGTAGAC-TTTGAAAAGATTA
*
347379 -CACCAACTCGTGTAGACTTTGAAAAGGTTA
1 CCACCAACTCGTGTAGACTTTGAAAAGATTA
* * *
347409 CCACCAACAT-GTGTAGGCTTTTGAAACGATTG
1 CCACCAAC-TCGTGTAGAC-TTTGAAAAGATTA
* *
347441 CCACCAAATCAAGTG-AG-CTTTGAAAAGGTTA
1 CCACCAACTC--GTGTAGACTTTGAAAAGATTA
* * * * *
347472 CCACCAATTCGTGTGGGCTTTTGAAAAGGTTG
1 CCACCAACTCGTGTAGAC-TTTGAAAAGATTA
** * * * * *
347504 CCATAAATTCCTGTAGGCTATTGAAAAGGTTG
1 CCACCAACTCGTGTAGACT-TTGAAAAGATTA
** * * * * *
347536 CCAATAACTCGTTTGGGCTTTGAAAAGGTTG
1 CCACCAACTCGTGTAGACTTTGAAAAGATTA
* * * * * *
347567 CGACCAACTCGTATGGACTTTTGCAAAGGTTG
1 CCACCAACTCGTGTAGAC-TTTGAAAAGATTA
* * * * *
347599 CCACCAACTCATGTGGGATTTTGAAAAGGTTG
1 CCACCAACTCGTGT-AGACTTTGAAAAGATTA
* * * * *
347631 CCACCAACTAGTGTGGGCTTCTGAAAAGGTTG
1 CCACCAACTCGTGTAGACTT-TGAAAAGATTA
* * *
347663 CCAACAACTTGTGTTGACT
1 CCACCAACTCGTGTAGACT
347682 CTAAAAAGGT
Statistics
Matches: 266, Mismatches: 55, Indels: 27
0.76 0.16 0.08
Matches are distributed among these distances:
29 3 0.01
30 11 0.04
31 92 0.35
32 152 0.57
33 5 0.02
34 3 0.01
ACGTcount: A:0.28, C:0.20, G:0.23, T:0.30
Consensus pattern (31 bp):
CCACCAACTCGTGTAGACTTTGAAAAGATTA
Found at i:347656 original size:127 final size:125
Alignment explanation
Indices: 347312--348157 Score: 566
Period size: 127 Copynumber: 6.7 Consensus size: 125
347302 TAACTCGTAA
* * * * * * * **
347312 GTTGCCACCAACTCGTGTGGATTTTGAAAAGTTTGCCTCAAACTCGTGTGGGCTTTTTAAAATAT
1 GTTGCGACCAACTCGTATGGATTTTGAAAAGGTTGCCACCAACTCATGTGGGCTTTTGAAAAGGT
* * * * ** * * * *
347377 T-ACACCAACTCGTGTAGACTTTGAAAAGGTTACCACCAACAT-GTGTAGGCTTTTGAAACG
66 TGCCACCAACTAGTGTGGACTTTGAAAAAGTTGTCACTAAC-TCGTTTGGGC-TTTGAAAAG
* * * * * * * *
347437 ATTGCCACCAAATC--AAGTGAGCTTTGAAAAGGTTACCACCAATTCGTGTGGGCTTTTGAAAAG
1 GTTGCGACCAACTCGTATG-GA-TTTTGAAAAGGTTGCCACCAACTCATGTGGGCTTTTGAAAAG
** * ** * * *
347500 GTTGCCATAAATTCCTGTAGG-CTATTGAAAAGGTTGCCAATAACTCGTTTGGGCTTTGAAAAG
64 GTTGCCACCAACTAGTGT-GGACT-TTGAAAAAGTTGTCACTAACTCGTTTGGGCTTTGAAAAG
* *
347563 GTTGCGACCAACTCGTATGGACTTTTGCAAAGGTTGCCACCAACTCATGTGGGATTTTGAAAAGG
1 GTTGCGACCAACTCGTATGGA-TTTTGAAAAGGTTGCCACCAACTCATGTGGGCTTTTGAAAAGG
* * * * * * *
347628 TTGCCACCAACTAGTGTGGGCTTCTGAAAAGGTTGCCAAC-AACTTGTGTT-GACTCTAAAAAG
65 TTGCCACCAACTAGTGTGGACTT-TGAAAAAGTTGTC-ACTAACTCGT-TTGGGCTTTGAAAAG
* * * * * * * * * *
347690 GTTGCCACTAATTTGTGTGGGATTTTAAAAAGGCTACCACCAACTCATGTGGGATTTTGAAAAAG
1 GTTGCGACCAACTCGTAT-GGATTTTGAAAAGGTTGCCACCAACTCATGTGGGCTTTTGAAAAGG
* * * * * *
347755 TTGCTAACAAC-ATGTGTGGACTTTGAAAATGTTGTCACCT-ACTCGTGTGGGATTTTGAAATG
65 TTGCCACCAACTA-GTGTGGACTTTGAAAAAGTTGTCA-CTAACTCGTTTGGG-CTTTGAAAAG
* * * * * * * *
347817 TTTGCCACCAACGCATTTGGGATTTTGAAAAGGTTGCTACCAACTCATGTAGGCTTTTGAAAACG
1 GTTGCGACCAACTCGTAT-GGATTTTGAAAAGGTTGCCACCAACTCATGTGGGCTTTTGAAAAGG
* * * * * * *
347882 TTACCAACAACTTGTGTGGACTTTGAAAAAGTTGTTACCAACT--TTGTGGGTTTTGAAAAA
65 TTGCCACCAACTAGTGTGGACTTTGAAAAAGTTGTCACTAACTCGTT-TGGGCTTTGAAAAG
* * * ** *
347942 GTTGCTG-CCAACTCGTGTGCGATTTTGAAAAGGTTGCCATCAACTCGTGTTTGCTTTTAAAAAG
1 GTTGC-GACCAACTCGTATG-GATTTTGAAAAGGTTGCCACCAACTCATGTGGGCTTTTGAAAAG
* * * * * **
348006 GTTGTCACCAACTTGTGTTGACTTTGAAAAAGTTATCACTAATTCGCGTGGGCTTTTGAAAAG
64 GTTGCCACCAACTAGTGTGGACTTTGAAAAAGTTGTCACTAACTCGTTTGGGC-TTTGAAAAG
* * *
348069 GTTGCGACCAACTC-TCATAGACTTTTGAAAAGGTTGCCACCAACTCATGCGGGCTTTTAAAAAG
1 GTTGCGACCAACTCGT-ATGGA-TTTTGAAAAGGTTGCCACCAACTCATGTGGGCTTTTGAAAAG
** *
348133 GTTATCACCAACTCGTGTGGACTTT
64 GTTGCCACCAACTAGTGTGGACTTT
348158 TGGGCTTTTA
Statistics
Matches: 567, Mismatches: 125, Indels: 56
0.76 0.17 0.07
Matches are distributed among these distances:
123 1 0.00
124 3 0.01
125 144 0.25
126 66 0.12
127 345 0.61
128 8 0.01
ACGTcount: A:0.28, C:0.18, G:0.22, T:0.31
Consensus pattern (125 bp):
GTTGCGACCAACTCGTATGGATTTTGAAAAGGTTGCCACCAACTCATGTGGGCTTTTGAAAAGGT
TGCCACCAACTAGTGTGGACTTTGAAAAAGTTGTCACTAACTCGTTTGGGCTTTGAAAAG
Found at i:347741 original size:32 final size:31
Alignment explanation
Indices: 347591--348286 Score: 241
Period size: 32 Copynumber: 21.7 Consensus size: 31
347581 GGACTTTTGC
*
347591 AAAGGTTGCCACCAACTCATGTGGGATTTTGA
1 AAAGGTTGCCACCAACT-ATGTGGGATTTTAA
* * *
347623 AAAGGTTGCCACCAACTAGTGTGGGCTTCTGA
1 AAAGGTTGCCACCAACTA-TGTGGGATTTTAA
* * * *
347655 AAAGGTTGCCAACAACT-TGTGTTGACTCTAA
1 AAAGGTTGCCACCAACTATGTG-GGATTTTAA
* * *
347686 AAAGGTTGCCACTAATTTGTGTGGGATTTTAA
1 AAAGGTTGCCACCAA-CTATGTGGGATTTTAA
* *
347718 AAAGGCTACCACCAACTCATGTGGGATTTTGAA
1 AAAGGTTGCCACCAACT-ATGTGGGATTTT-AA
* * * *
347751 AAA-GTTGCTAACAAC-ATGTGTGGACTTTGA
1 AAAGGTTGCCACCAACTATGTG-GGATTTTAA
* * * * *
347781 AAATGTTGTCACCTACTCGTGTGGGATTTTGA
1 AAAGGTTGCCACCAACT-ATGTGGGATTTTAA
* * * * *
347813 AATGTTTGCCACCAACGCATTTGGGATTTTGA
1 AAAGGTTGCCACCAAC-TATGTGGGATTTTAA
* * * *
347845 AAAGGTTGCTACCAACTCATGTAGGCTTTTGA
1 AAAGGTTGCCACCAACT-ATGTGGGATTTTAA
* * * *
347877 AAACGTTACCAACAACT-TGTGTGGACTTTGAA
1 AAAGGTTGCCACCAACTATGTG-GGA-TTTTAA
** *
347909 AAA-GTTGTTACCAACTTTGTGGG-TTTTGAA
1 AAAGGTTGCCACCAACTATGTGGGATTTT-AA
** * * *
347939 AAA-GTTGCTGCCAACTCGTGTGCGATTTTGA
1 AAAGGTTGCCACCAACT-ATGTGGGATTTTAA
* * ** *
347970 AAAGGTTGCCATCAACTCGTGTTTGCTTTTAA
1 AAAGGTTGCCACCAACT-ATGTGGGATTTTAA
* * *
348002 AAAGGTTGTCACCAACT-TGTGTTGACTTTGAA
1 AAAGGTTGCCACCAACTATGTG-GGA-TTTTAA
** * * ** * *
348034 AAA-GTTATCACTAATTCGCGTGGGCTTTTGA
1 AAAGGTTGCCACCAACT-ATGTGGGATTTTAA
* * * * *
348065 AAAGGTTGCGACCAACTCTCAT-AGACTTTTGA
1 AAAGGTTGCCACCAACTAT-GTGGGA-TTTTAA
* *
348097 AAAGGTTGCCACCAACTCATGCGGGCTTTTAA
1 AAAGGTTGCCACCAACT-ATGTGGGATTTTAA
** * *
348129 AAAGGTTATCACCAACTCGTGTGGACTTTTGGGCTTTTAA
1 AAAGGTTGCCACCAA--C---T--A--TGTGGGATTTTAA
* * * *
348169 AAATGTTGCAACCAACTCATGT-GGA-CTTGA
1 AAAGGTTGCCACCAACT-ATGTGGGATTTTAA
* *
348199 AAAGGTTGCCATCAACTTATGTGGG-CTTTAGA
1 AAAGGTTGCCACCAAC-TATGTGGGATTTTA-A
* * *
348231 AAAGGCTGCCATCAACTTATGTCGGG-TTTTGA
1 AAAGGTTGCCACCAAC-TATGT-GGGATTTTAA
* *
348263 AAATGTTGCCACTAACTCATGTGG
1 AAAGGTTGCCACCAACT-ATGTGG
348287 ACTTTGATTA
Statistics
Matches: 496, Mismatches: 126, Indels: 85
0.70 0.18 0.12
Matches are distributed among these distances:
29 3 0.01
30 55 0.11
31 86 0.17
32 300 0.60
33 24 0.05
34 2 0.00
35 1 0.00
37 1 0.00
38 2 0.00
40 22 0.04
ACGTcount: A:0.28, C:0.18, G:0.23, T:0.31
Consensus pattern (31 bp):
AAAGGTTGCCACCAACTATGTGGGATTTTAA
Found at i:347953 original size:93 final size:95
Alignment explanation
Indices: 347834--348039 Score: 231
Period size: 93 Copynumber: 2.2 Consensus size: 95
347824 CCAACGCATT
* * *
347834 TGGGATTTTGAAAAGGTTGCTACCAACTCATGTAG-GCTTTTGAAAACGTTACCAACAACTTGTG
1 TGGG-TTTTGAAAAAGTTGCTACCAACTCATGT-GCGATTTTGAAAACGTTACCAACAACTCGTG
*
347898 -TGGACTTTGAAAAA-GTTGTTACCAACTT-TG
64 TTGG-CTTTGAAAAAGGTTGTCACCAACTTGTG
* * * * *
347928 TGGGTTTTGAAAAAGTTGCTGCCAACTCGTGTGCGATTTTGAAAAGGTTGCCATCAACTCGTGTT
1 TGGGTTTTGAAAAAGTTGCTACCAACTCATGTGCGATTTTGAAAACGTTACCAACAACTCGTGTT
* *
347993 TGCTTTTAAAAAGGTTGTCACCAACTTGTG
66 GGCTTTGAAAAAGGTTGTCACCAACTTGTG
* **
348023 TTGACTTTGAAAAAGTT
1 TGGGTTTTGAAAAAGTT
348040 ATCACTAATT
Statistics
Matches: 94, Mismatches: 14, Indels: 7
0.82 0.12 0.06
Matches are distributed among these distances:
92 1 0.01
93 58 0.62
94 19 0.20
95 16 0.17
ACGTcount: A:0.28, C:0.16, G:0.22, T:0.34
Consensus pattern (95 bp):
TGGGTTTTGAAAAAGTTGCTACCAACTCATGTGCGATTTTGAAAACGTTACCAACAACTCGTGTT
GGCTTTGAAAAAGGTTGTCACCAACTTGTG
Found at i:348183 original size:40 final size:40
Alignment explanation
Indices: 348119--348196 Score: 113
Period size: 40 Copynumber: 1.9 Consensus size: 40
348109 CAACTCATGC
* *
348119 GGGCTTTTAAAAAGGTTATCACCAACTCGTGTGGACTTTT
1 GGGCTTTTAAAAAGGTTAGCACCAACTCATGTGGACTTTT
*
348159 GGGCTTTTAAAAATGTT-GCAACCAACTCATGTGGACTT
1 GGGCTTTTAAAAAGGTTAGC-ACCAACTCATGTGGACTT
348197 GAAAAGGTTG
Statistics
Matches: 34, Mismatches: 3, Indels: 2
0.87 0.08 0.05
Matches are distributed among these distances:
39 1 0.03
40 33 0.97
ACGTcount: A:0.27, C:0.18, G:0.22, T:0.33
Consensus pattern (40 bp):
GGGCTTTTAAAAAGGTTAGCACCAACTCATGTGGACTTTT
Found at i:348462 original size:32 final size:32
Alignment explanation
Indices: 348391--348583 Score: 169
Period size: 32 Copynumber: 6.1 Consensus size: 32
348381 TTGGCTACGG
* * *
348391 TGCTACAAACTCGTGT-GAACTTTGAAAAGGT
1 TGCTACCAACTCGTGTAGGATTTTGAAAAGGT
* * * *
348422 TG-TCACAAACTCATGTAGGCTTTTAAAAAGGT
1 TGCT-ACCAACTCGTGTAGGATTTTGAAAAGGT
* * * *
348454 TGCTACAAACACATGT-GGATTTTTGAAATGGT
1 TGCTACCAACTCGTGTAGGA-TTTTGAAAAGGT
* * * * *
348486 TACCACCAACTCGTGTGGGCTTTTAAAAAGGT
1 TGCTACCAACTCGTGTAGGATTTTGAAAAGGT
*
348518 TGCTACCAACTCGTGTTA-AATTTTGAAAAGGT
1 TGCTACCAACTCGTG-TAGGATTTTGAAAAGGT
*
348550 TGCCACCAACTCGTGTAGGATTTTGAAAAGGT
1 TGCTACCAACTCGTGTAGGATTTTGAAAAGGT
348582 TG
1 TG
348584 TTGTAGACAC
Statistics
Matches: 130, Mismatches: 25, Indels: 13
0.77 0.15 0.08
Matches are distributed among these distances:
30 1 0.01
31 17 0.13
32 108 0.83
33 4 0.03
ACGTcount: A:0.31, C:0.17, G:0.22, T:0.31
Consensus pattern (32 bp):
TGCTACCAACTCGTGTAGGATTTTGAAAAGGT
Found at i:348898 original size:13 final size:13
Alignment explanation
Indices: 348880--348907 Score: 56
Period size: 13 Copynumber: 2.2 Consensus size: 13
348870 ATACATTACT
348880 CAATGTATCGATA
1 CAATGTATCGATA
348893 CAATGTATCGATA
1 CAATGTATCGATA
348906 CA
1 CA
348908 TTTGATCTTT
Statistics
Matches: 15, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 15 1.00
ACGTcount: A:0.39, C:0.18, G:0.14, T:0.29
Consensus pattern (13 bp):
CAATGTATCGATA
Found at i:352130 original size:32 final size:32
Alignment explanation
Indices: 352080--353077 Score: 552
Period size: 32 Copynumber: 31.5 Consensus size: 32
352070 CGTTACGACA
* *
352080 GTTGCCACCAACACGTGTGGGCATTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * *
352112 GTTGCCAACAACTTGTGTGGAC-TTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* *
352143 GTTGTCATCAACTCGTGTGGGCTTTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
** *****
352175 GTTGCCACCAACTTTTACAAACTTTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * *
352207 GTAT-CCACCAACTTGTGTGGAC-TTTGAAATG
1 GT-TGCCACCAACTCGTGTGGGCTTTTGAAAAG
* *
352238 GTTGCCACCTACTTGTGTGGGCTTTTGGGCTTTTGAAAAG
1 GTTGCCACCAAC-T-CGT--G----TGGGCTTTTGAAAAG
* * * * * *
352278 GTTGACACCAACTCTTATAGACTTTTG-AACG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
** * * *
352309 GTTGCCATTAACTCATGTGGAC-TTTGAAATG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * * **
352340 GTTACCACCAATTCATGTGGATTTTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
*
352372 ATTGCCACCAACTCGTGT-GGCTTTTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGC-TTTTGAAAAG
* * *
352404 GTTGCCACCAACTCTTATGGGTTTTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* ** * * *
352436 GTTGCCAACAACAAGTTTGGGC-TTTCAAAAA
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* ** * *
352467 GTTGCCACCAACTCATGTGAACATTTGCAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * * * * *
352499 CTTACCACTAACTCGTGTAGGCTTTTAAAAAT
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * * *
352531 GTTGCTACTAACTTGTGTGGGATTTTG-AAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* *
352562 GTTGCCACCAACACGTGTGGGATTTTGAAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTG-AAAAG
*
352595 GTTGCCACCAACTCGTATGGGCTTTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * ** * * * *
352627 GTTGCCAACAGCTTATATAGGC-TTTCAAATG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * * *
352658 GCTGTCACCAACTCGTGTGGGATTTTAAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * * * * *
352690 TTTGCCACCAACGCATTTGGGATTTTGAAAAC
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * *
352722 GTTGCCAGCAACTCATGTGGGCTTCTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * * * * * * *
352754 GATGCCCCCAAACTCCTTTGGAC-ATTGACTATG
1 GTTGCCACC-AACTCGTGTGGGCTTTTGA-AAAG
* * * * * *
352787 G-TGCCACCAACTGGTAT-AGATGTTGGAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * *
352817 CTTGCCACCAACTCGTGTAGAC-TTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
*** * *
352848 GTTTTTACCAATTCGTGCGGGCTTTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * * * *
352880 GCTGCCACTAACTCGTGTGGAC-TTTGACTATG
1 GTTGCCACCAACTCGTGTGGGCTTTTGA-AAAG
* * * * *
352912 G-TGCCAGCAACACGTATGGAC-TTTAAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
*
352942 ATTGCCACCAACTCGTGTGGGC-TTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * *
352973 GTTACCACTAACT--TGT--G-TTTTGAAAAA
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* *
353000 GTTGCCACCAACTCGTGTGGAC-TTTGACAATG
1 GTTGCCACCAACTCGTGTGGGCTTTTGA-AAAG
* * *
353032 G-TGCCACCAACTCATGTGGAC-TTTAAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
*
353062 GTTGCCACTAACTCGT
1 GTTGCCACCAACTCGT
353078 AAGTTGCCAC
Statistics
Matches: 722, Mismatches: 208, Indels: 73
0.72 0.21 0.07
Matches are distributed among these distances:
27 20 0.03
29 6 0.01
30 13 0.02
31 295 0.41
32 316 0.44
33 47 0.07
35 1 0.00
38 1 0.00
39 5 0.01
40 18 0.02
ACGTcount: A:0.27, C:0.20, G:0.23, T:0.30
Consensus pattern (32 bp):
GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
Found at i:352263 original size:63 final size:64
Alignment explanation
Indices: 352080--353074 Score: 440
Period size: 63 Copynumber: 15.7 Consensus size: 64
352070 CGTTACGACA
* *
352080 GTTGCCACCAACACGTGTGGGCATTTGAAAAGGTTGCCAACAACTTGTGTGGAC-TTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCATTTGAAAAGGTTGCCACCAACTTGTGTGGACTTTTGAAAAG
* * * * ****
352143 GTTGTCATCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTTTTACAAACTTTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCATTTGAAAAGGTTGCCACCAACTTGTGTGGACTTTTGAAAAG
* * * * *
352207 GTAT-CCACCAACTTGTGTGGAC-TTTGAAATGGTTGCCACCTACTTGTGTGGGCTTTTGGGCTT
1 GT-TGCCACCAACTCGTGTGGGCATTTGAAAAGGTTGCCACCAAC-T-TGT--G----TGGACTT
352270 TTGAAAAG
57 TTGAAAAG
* * * * * * * ** ** *
352278 GTTGACACCAACTCTTATAGACTTTTG-AACGGTTGCCATTAACTCATGTGGAC-TTTGAAATG
1 GTTGCCACCAACTCGTGTGGGCATTTGAAAAGGTTGCCACCAACTTGTGTGGACTTTTGAAAAG
* * * *** * *
352340 GTTACCACCAATTCATGTGGATTTTTGAAAAGATTGCCACCAACTCGTGTGG-CTTTTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCATTTGAAAAGGTTGCCACCAACTTGTGTGGAC-TTTTGAAAAG
* * ** * ** * * * *
352404 GTTGCCACCAACTCTTATGGGTTTTTGAAAAGGTTGCCAACAACAAGTTTGGGC-TTTCAAAAA
1 GTTGCCACCAACTCGTGTGGGCATTTGAAAAGGTTGCCACCAACTTGTGTGGACTTTTGAAAAG
* ** * * * * * * *
352467 GTTGCCACCAACTCATGTGAACATTTGCAAAGCTTACCACTAACTCGTGTAGG-CTTTTAAAAAT
1 GTTGCCACCAACTCGTGTGGGCATTTGAAAAGGTTGCCACCAACTTGTGT-GGACTTTTGAAAAG
* * * **
352531 GTTGCTACTAACTTGTGTGGG-ATTTTG-AAAGGTTGCCACCAACACGTGTGGGA-TTTTGAAAA
1 GTTGCCACCAACTCGTGTGGGCA-TTTGAAAAGGTTGCCACCAACTTGTGT-GGACTTTTG-AAA
352593 AG
63 AG
* * * * * * * *
352595 GTTGCCACCAACTCGTATGGGCTTTTGAAAAGGTTGCCAACAGCTTATATAGG-C-TTTCAAATG
1 GTTGCCACCAACTCGTGTGGGCATTTGAAAAGGTTGCCACCAACTTGTGT-GGACTTTTGAAAAG
* * * *
352658 GCTGTCACCAACTCGTGTGGG-ATTTTAAAAAGTTTGCCACCAACGCATT-TG-GGA-TTTTGAA
1 GTTGCCACCAACTCGTGTGGGCA-TTTGAAAAGGTTGCCACCAA--C-TTGTGTGGACTTTTGAA
*
352719 AAC
62 AAG
* * * * ** * * *
352722 GTTGCCAGCAACTCATGTGGGC-TTCTGAAAAGGATGCCCCCAAACTCCTTTGGAC-ATTGACTA
1 GTTGCCACCAACTCGTGTGGGCATT-TGAAAAGGTTGCCACC-AACTTGTGTGGACTTTTGA-AA
*
352785 TG
63 AG
* * * * * * *
352787 G-TGCCACCAACTGGTAT-AG-ATGTTGGAAAGCTTGCCACCAACTCGTGTAGAC-TTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCAT-TTGAAAAGGTTGCCACCAACTTGTGTGGACTTTTGAAAAG
*** * * * * * * * *
352848 GTTTTTACCAATTCGTGCGGGCTTTTGAAAAGGCTGCCACTAACTCGTGTGGAC-TTTGACTATG
1 GTTGCCACCAACTCGTGTGGGCATTTGAAAAGGTTGCCACCAACTTGTGTGGACTTTTGA-AAAG
* * * * * * * *
352912 G-TGCCAGCAACACGTATGGAC-TTTAAAAAGATTGCCACCAACTCGTGTGGGC-TTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCATTTGAAAAGGTTGCCACCAACTTGTGTGGACTTTTGAAAAG
* * * * * *
352973 GTTACCACTAACT--TGT--G-TTTTGAAAAAGTTGCCACCAACTCGTGTGGAC-TTTGACAATG
1 GTTGCCACCAACTCGTGTGGGCATTTGAAAAGGTTGCCACCAACTTGTGTGGACTTTTGA-AAAG
* * * *
353032 G-TGCCACCAACTCATGTGGAC-TTTAAAAAGGTTGCCACTAACT
1 GTTGCCACCAACTCGTGTGGGCATTTGAAAAGGTTGCCACCAACT
353075 CGTAAGTTGC
Statistics
Matches: 688, Mismatches: 193, Indels: 103
0.70 0.20 0.10
Matches are distributed among these distances:
58 41 0.06
59 4 0.01
60 5 0.01
61 6 0.01
62 110 0.16
63 255 0.37
64 191 0.28
65 28 0.04
66 2 0.00
67 1 0.00
69 1 0.00
70 2 0.00
71 38 0.06
72 4 0.01
ACGTcount: A:0.27, C:0.20, G:0.23, T:0.30
Consensus pattern (64 bp):
GTTGCCACCAACTCGTGTGGGCATTTGAAAAGGTTGCCACCAACTTGTGTGGACTTTTGAAAAG
Found at i:352472 original size:95 final size:95
Alignment explanation
Indices: 352367--357416 Score: 919
Period size: 95 Copynumber: 53.5 Consensus size: 95
352357 TGGATTTTTG
* * *
352367 AAAAGATTGCCACCAACTCGTGTGGCTTTTTGAAAAGGTTGCCACCAACTCTTATGGGTTTTTGA
1 AAAAG-TTGCCACCAACTCGTGTGGCATTTTGAAAAGGTTGCCACCAACTCGTATGGGCTTTTGA
* *
352432 AAAGGTTGCCAACAACAAGTTTGGGCTTTCA
65 AAAGGTTGCCAACAACTAGTATGGGCTTTCA
* * * * * * * * *
352463 AAAAGTTGCCACCAACTCATGTGAACA-TTTGCAAAGCTTACCACTAACTCGTGTAGGCTTTTAA
1 AAAAGTTGCCACCAACTCGTGTG-GCATTTTGAAAAGGTTGCCACCAACTCGTATGGGCTTTTGA
* * * * * **
352527 AAATGTTG-CTACTAACTTGTGTGGGATTTTG
65 AAAGGTTGCCAAC-AACTAGTATGGGCTTTCA
* * *
352558 AAAGGTTGCCACCAACACGTGTGGGATTTTGAAAAAGGTTGCCACCAACTCGTATGGGCTTTTGA
1 AAAAGTTGCCACCAACTCGTGTGGCATTTTG-AAAAGGTTGCCACCAACTCGTATGGGCTTTTGA
* *
352623 AAAGGTTGCCAACAGCTTA-TATAGGCTTTCA
65 AAAGGTTGCCAACAAC-TAGTATGGGCTTTCA
** * * * * * * * * *
352654 AATGGCTGTCACCAACTCGTGTGGGATTTTAAAAAGTTTGCCACCAACGCATTTGGGATTTTGAA
1 AAAAGTTGCCACCAACTCGTGTGGCATTTTGAAAAGGTTGCCACCAACTCGTATGGGCTTTTGAA
* * * *
352719 AACGTTGCCAGCAACTCA-TGTGGGCTTCTGA
66 AAGGTTGCCAACAACT-AGTATGGGCTT-TCA
* * * * * * * * * * *
352750 AAAGGATGCCCCCAAACTCCTTTGGACA--TTGACTATGG-TGCCACCAACTGGTAT-AGATGTT
1 AAAAGTTGCCACC-AACTCGTGTGG-CATTTTGA-AAAGGTTGCCACCAACTCGTATGGGCTTTT
* * * * * * * *
352811 GGAAAGCTTGCCACCAACTCGTGTAGACTTTGA
63 GAAAAGGTTGCCAACAACTAGTATGGGCTTTCA
* *** * * * * * *
352844 AAAGGTTTTTACCAATTCGTGCGGGC-TTTTGAAAAGGCTGCCACTAACTCGTGTGGAC-TTTGA
1 AAAAGTTGCCACCAACTCGTG-TGGCATTTTGAAAAGGTTGCCACCAACTCGTATGGGCTTTTGA
* * * *
352907 CTATGG-TGCCAGCAAC-ACGTATGGACTTT-A
65 -AAAGGTTGCCAACAACTA-GTATGGGCTTTCA
* * *
352937 AAAAGATTGCCACCAACTCGTGTGGGC--TTTGAAAAGGTTACCACTAA--C-T-TGTG-TTTTG
1 AAAAG-TTGCCACCAACTCGTGT-GGCATTTTGAAAAGGTTGCCACCAACTCGTATGGGCTTTTG
* * * * * *
352995 AAAAAGTTGCCACCAACTCGTGTGGACTTTGA
64 AAAAGGTTGCCAACAACTAGTATGGGCTTTCA
* * * * * * *
353027 CAATGGTGCCACCAACTCATGTGG-ACTTTAAAAAGGTTGCCACTAACTC------G----T---
1 AAAAGTTGCCACCAACTCGTGTGGCATTTTGAAAAGGTTGCCACCAACTCGTATGGGCTTTTGAA
* * * * ** *
353078 AA-GTTGCCACCAATTCGTGTGGATTTTGA
66 AAGGTTGCCAACAACTAGTATGGGCTTTCA
** * * ** * * * *
353107 AAAGTTTGCCACCAACTTGTGTGGGC-TTTTTAAAATATTG-TACCAACTCGTGTAGAC-TTTGA
1 AAAAGTTGCCACCAACTCGTGT-GGCATTTTGAAAAGGTTGCCACCAACTCGTATGGGCTTTTGA
* * * *
353169 AAAGGTTACCACCAAC-ACGT-TAGGCTTTTGA
65 AAAGGTTGCCAACAACTA-GTATGGGC-TTTCA
** * * * * * * *
353200 AACGGTTGCCACCAAATTAAGTG-GGC--TTTGAAAATGTTACCACCAATTCTTGTGGGCTTTTG
1 AAAAGTTGCCACC-AACT-CGTGTGGCATTTTGAAAAGGTTGCCACCAACTCGTATGGGCTTTTG
*** * ** * *
353262 AAAAGGTTGCTGCCAATTCCTATAGGCTTTTGA
64 AAAAGGTTGCCAACAACTAGTATGGGC-TTTCA
* * ** * * *** * *
353295 AAAGGTTTCCAATATCTCGTTTAGG--TTTTGAAAAGGTTATGACCAACTCGTGTGGACTTTT-A
1 AAAAGTTGCCACCAACTCGTGT-GGCATTTTGAAAAGGTTGCCACCAACTCGTATGGGCTTTTGA
* * * *
353357 CAGAA-GTTGCCACCAACTCGTGTGGGCTTTTGA
65 -A-AAGGTTGCCAACAACTAGTATGGGC-TTTCA
* * * * * *
353390 AAAGGTTGCTACCAACTCGTGTGGGATTTTGAAAAGGTTGCCACCAACTCATGTGGGATTTTGAA
1 AAAAGTTGCCACCAACTCGTGTGGCATTTTGAAAAGGTTGCCACCAACTCGTATGGGCTTTTGAA
* * * * *
353455 AAGATTGCCACCAACTCGTATGAGCTTTTGA
66 AAGGTTGCCAACAACTAGTATGGGC-TTTCA
* * * * * * * * *
353486 AAAGGTTGCCAACAACTTGTGTGG-ACTCTAAAAAGGTTGTCACCAACTCGTGTGGGATTTTGAA
1 AAAAGTTGCCACCAACTCGTGTGGCATTTTGAAAAGGTTGCCACCAACTCGTATGGGCTTTTGAA
* * *
353550 AAGGTTGCCATCAACTCGTATGGGCTTTGA
66 AAGGTTGCCAACAACTAGTATGGGCTTTCA
* * * * * * * * * * * * *
353580 GAAGGTTACCACTAACTTGTGTGG-ACTTCGACTATGG-TGCCGCCAACTTGTGTGGAC-TTTGA
1 AAAAGTTGCCACCAACTCGTGTGGCATTTTGA-AAAGGTTGCCACCAACTCGTATGGGCTTTTGA
* ** *
353642 AAAGATTGCCAACAACT--TACGTGTACTTTGA
65 AAAGGTTGCCAACAACTAGTA--TGGGCTTTCA
** * * * * **
353673 AAATTTTACCACAAACTCGTGTGGGC-TTTT-AATAGGTTGCCACCAACTCGTGTGAAC-TTT-A
1 AAAAGTTGCCACCAACTCGTGT-GGCATTTTGAAAAGGTTGCCACCAACTCGTATGGGCTTTTGA
* * * ** * * *
353734 ACTATGG-TACCATCAACTTTTGTGTGCTTTGA
65 A--AAGGTTGCCAACAACTAGTATGGGCTTTCA
* * * * * * **
353766 AAAGGTTACCACCAA--C-T-T-G-----T----AGGTTGCCACCAACTCATGTGGACATTGAAA
1 AAAAGTTGCCACCAACTCGTGTGGCATTTTGAAAAGGTTGCCACCAACTCGTATGGGCTTTTGAA
** * *
353817 AGTTTGTCGCCAATTC-A-T-GTA--GGCTTTTGA
66 A--AGGTTGCCAA--CAACTAGTATGGGC-TTTCA
* * * * * * * * *
353847 AAATGTTGCCACCAACACGTG-GGGACTTTGACTATGG-TGCCACCAACTTGTATTAGAC-TTTG
1 AAAAGTTGCCACCAACTCGTGTGGCATTTTGA-AAAGGTTGCCACCAACTCGTA-TGGGCTTTTG
* ** *
353909 AAAAGGTTGCCACCAACTCTTGTGGGC-TTCTA
64 AAAAGGTTGCCAACAACTAGTATGGGCTTTC-A
* * * * * * * * *
353941 AAAATGTTGCC-CCTAACTCATTTGG-ACTTTGACTATGG-TGCCACCAACTTGTATAGACTTTG
1 AAAA-GTTGCCACC-AACTCGTGTGGCATTTTGA-AAAGGTTGCCACCAACTCGTATGGGCTTTT
* * * * * * *
354003 GAAAA-CTTGCCACCAACTCGTGTAGACTTTGA
63 GAAAAGGTTGCCAACAACTAGTATGGGCTTTCA
* * * * *
354035 AAAGGTTACCACCAACTCGCT-AGGC-TTTTGAAAAGGTTGCTACCAACTCGTTTGGGCTTTTGA
1 AAAAGTTGCCACCAACTCG-TGTGGCATTTTGAAAAGGTTGCCACCAACTCGTAT--G-----G-
* ** ** * * *
354098 GCTTTTGAAAAGATTGCCAGTAACTCTTGTGGACTTT-T
57 GCTTTTGAAAAGGTTGCCAACAACTAGTATGGGCTTTCA
* * ** * * * * * * **
354136 GAAAGACTGCCATTAACTCATGTGG-ACTTTGAAATGGTTGCCACAAATTCGTGTGGATTTTTGA
1 AAAAG-TTGCCACCAACTCGTGTGGCATTTTGAAAAGGTTGCCACCAACTCGTATGGGCTTTTGA
* * ** * * ** **
354200 ATAGGTTACCTCCAACTTGTGTGGTTTTTTG
65 AAAGGTTGCCAACAACTAGTATGGGCTTTCA
* * * * * ** * * ** ** * * *
354231 AAAAGTTTACTACCAATTCATTTGGTTTTTTGAAATGGTTACCATTAACTTATGTGGGCCTTCG-
1 AAAAG-TTGCCACCAACTCGTGTGGCATTTTGAAAAGGTTGCCACCAACTCGTATGGGCTTTTGA
* * * * * *
354295 AAAGGTTGCTACCAACTCGTGT-GGATTTTA
65 AAAGGTTGCCAACAACTAGTATGGGCTTTCA
* * * * * * *
354325 AAAAGGTTACCACGAACTCGTGCGGGATTTTGAAAAGGTTGCCACCAACACATGTGGGCTTTTGA
1 AAAA-GTTGCCACCAACTCGTGTGGCATTTTGAAAAGGTTGCCACCAACTCGTATGGGCTTTTGA
** * * *
354390 AAAGGTTGCCAACAACTTCTGTGGACTTTGA
65 AAAGGTTGCCAACAACTAGTATGGGCTTTCA
* * * ** *
354421 AAAAGTTGTCACCAACTCGTGTGGGC-TTTTGAAGAGGTTGCCACCAACTCTTACAGACTTTTGA
1 AAAAGTTGCCACCAACTCGTGT-GGCATTTTGAAAAGGTTGCCACCAACTCGTATGGGCTTTTGA
* * * *
354485 AAAGGTAT-CCACCTACTTATGTGGGCTTTTGGGCTTTTGA
65 AAAGGT-TGCCAACAAC-TA-----G--TATGGGC-TTTCA
* * * * * * ** * * *
354525 AAAGGTTGACACCAACTCTTATGG-ACTTTTGAATA-GTTGCTATTAACTCATGTGGAC-TTTGA
1 AAAAGTTGCCACCAACTCGTGTGGCA-TTTTGAAAAGGTTGCCACCAACTCGTATGGGCTTTTGA
* * * * * ** *
354587 AATGGTTACCACCAATTCA-TGTGGATTTTTGA
65 AAAGGTTGCCAACAACT-AGTATGG-GCTTTCA
* * *
354619 AAAGGTTGCCACCAACTCGTGTGG-ATTTTTGAAAAGGTTGCCACCAACTCCTATGGGCTTTTAA
1 AAAAGTTGCCACCAACTCGTGTGGCA-TTTTGAAAAGGTTGCCACCAACTCGTATGGGCTTTTGA
*
354683 AAAGGTTGCCAACAACTCA-TTTGGGCTTTCA
65 AAAGGTTGCCAACAACT-AGTATGGGCTTTCA
* * * * ** *
354714 AAAGGTTGCCACCAACTCGTGTGGACA-TTTGTAAAGCTTACCACCAACTCGTGGGGGATTTTG-
1 AAAAGTTGCCACCAACTCGTGTGG-CATTTTGAAAAGGTTGCCACCAACTCGTATGGGCTTTTGA
* * * *
354777 AAAGGTTGCCAGCAACTCGTATGGGATTTTGA
65 AAAGGTTGCCAACAACTAGTATGGG-CTTTCA
* * * * * * *
354809 AAATGTTGCTAGCAACTCGTGTGGGC-TTTTGAAAAGGTTGCCAACAGCTTG-AGTGGAC-TTTG
1 AAAAGTTGCCACCAACTCGTGT-GGCATTTTGAAAAGGTTGCCACCAACTCGTA-TGGGCTTTTG
* * * * * * * **
354871 AAATGGTTGTCACCAACTCGTGTGAGATTTTG
64 AAAAGGTTGCCAACAACTAGTATGGGCTTTCA
* * * * * * * *
354903 AAAAGTTTGCCACCAACGCATGTAGG-ATTTCGAAAATGTTACCACCAATTTGTGTGGGCTTTTG
1 AAAAG-TTGCCACCAACTCGTGT-GGCATTTTGAAAAGGTTGCCACCAACTCGTATGGGCTTTTG
* * * *
354967 AAAAAGTTGCCAACAACTTGTGTGGAC-TTCGA
64 AAAAGGTTGCCAACAACTAGTATGGGCTTTC-A
* * ** * * * * * * *
354999 AAAGGTTGCTAATAACTCTTGTAG-ACTTTTGAAAAAGTTTCCACCAACTCGTGTAGAC-TTT-A
1 AAAAGTTGCCACCAACTCGTGTGGCA-TTTTGAAAAGGTTGCCACCAACTCGTATGGGCTTTTGA
* * *
355061 AAATGGTTGCCACCAACTCGTGTGGGCATTTGAGCTTTTGA
65 AAA-GGTTGCCAACAACTAGTATGGGC-TTT---C-----A
* * * * * * *
355102 AAAGGTTACCACCAACTCTTTTAGGC-TTTTG-AAAGGTTGCCATCAACTCGTGTGGAC-TTTGA
1 AAAAGTTGCCACCAACTCGTGT-GGCATTTTGAAAAGGTTGCCACCAACTCGTATGGGCTTTTGA
* * * * * *
355164 AATGGTTGCCACCAACTAGTGTGGACATTGA
65 AAAGGTTGCCAACAACTAGTATGGGCTTTCA
** * * * * * * * *
355195 AAGGGTTGCCACCAATTAGTTTGTGC-TTTTAAAAAGGTTGCCAGCAGCTCGTGTGGAC-TTTGA
1 AAAAGTTGCCACCAACTCGTGTG-GCATTTTGAAAAGGTTGCCACCAACTCGTATGGGCTTTTGA
* * *
355258 AAAGTTTGCC-ACTAACTCA-TAGGGGCTTTGA
65 AAAGGTTGCCAAC-AACT-AGTATGGGCTTTCA
* *** * * * * *
355289 AAAAGTTACCTTTAACTTGTGTGG-AATTTGAAAAGGTTGCTATCAACT--TATGTGGCCTTTTA
1 AAAAGTTGCCACCAACTCGTGTGGCATTTTGAAAAGGTTGCCACCAACTCGTATG-GG-CTTTTG
** * * *
355351 AAAAGGCAGCCAACAACTCGTGTGGGCTTT-T
64 AAAAGGTTGCCAACAACTAGTATGGGCTTTCA
* * * *
355382 GAAAGATTGCCACCAACTCATGTGG-ACTTTGAAAAGGTTGCCACTAACTCGTATGGGC-TTTGA
1 AAAAG-TTGCCACCAACTCGTGTGGCATTTTGAAAAGGTTGCCACCAACTCGTATGGGCTTTTGA
* * ** * *
355445 AAAGGTTACCACCAACTCCTATGGACTTTGA
65 AAAGGTTGCCAACAACTAGTATGGGCTTTCA
* * * * ***
355476 AAAGGTTGCTATCAACTCGTGTAGG--TTTTTAAAAGGGCAACCACCAACTCGTATGGGCTTTTG
1 AAAAGTTGCCACCAACTCGTGT-GGCATTTTGAAAA-GGTTGCCACCAACTCGTATGGGCTTTTG
* *
355539 AAAAGGTTTCCACCAACTCATGTA--GGCTTTCGA
64 AAAAGGTTGCCAACAACT-A-GTATGGGCTTTC-A
* * ** * * * * *
355572 AAATA-ATACCACCAAGGCGTGTGG-ACTTTGACTATAGG--GCCACCAACTTGTATAGAC-TTT
1 AAA-AGTTGCCACCAACTCGTGTGGCATTTTGA--AAAGGTTGCCACCAACTCGTATGGGCTTTT
** * ** * * *
355632 GAAAATATTGCCACCTGCTCGTATGAGCATTTGA
63 GAAAAGGTTGCCAACAACTAGTATGGGC-TTTCA
* * * * * * * * *
355666 AAAGGTTAG-CACCAACTCGTGT-GAACTTTGAAATGGTTGCCTCCAACTAGTGTAGACTTTTGA
1 AAAAGTT-GCCACCAACTCGTGTGGCATTTTGAAAAGGTTGCCACCAACTCGTATGGGCTTTTGA
* * * * ***
355729 AATGGTTGCCACCAACTCGTGTATACTTT-A
65 AAAGGTTGCCAACAACTAGTATGGGCTTTCA
* * * *
355759 AAAATGTTGCTACCAACTCGTGTTGGC--TATAAAAAGGTTGCCACCAACTCG--TGCGGATTTT
1 AAAA-GTTGCCACCAACTCGTG-TGGCATTTTGAAAAGGTTGCCACCAACTCGTATG-GGCTTTT
* * * * *
355820 GAAAAGGTTGCCATCAACTCGTGTAGGCTTTTA
63 GAAAAGGTTGCCAACAACTAGTATGGGCTTTCA
* * * * * * * * *
355853 AAAAGGCTGCCATCAACTCATGTAGGC-TTTTAAAAAAGTTGCCATCAACTAGTGTGGAC-TTTG
1 AAAA-GTTGCCACCAACTCGTGT-GGCATTTTGAAAAGGTTGCCACCAACTCGTATGGGCTTTTG
* ** * * **
355916 AAAAAGTTGCCCCCAACGAGTATGGACTTTTG
64 AAAAGGTTGCCAACAACTAGTATGGGCTTTCA
* ** * * * *
355948 AAAAGATTACCATAAACTTGTGTGGACA--TTGACAAGGTTGCCACTAACTCGTGTGGGC-TTTG
1 AAAAG-TTGCCACCAACTCGTGTGG-CATTTTGAAAAGGTTGCCACCAACTCGTATGGGCTTTTG
* * * * * * * *
356010 AAAAAGTTACCACCAACTCGTGTAGACTTTGA
64 AAAAGGTTGCCAACAACTAGTATGGGCTTTCA
* * * * * * * *
356042 AAAGGTTGCCATCAAGTCATGTGGGCA-TTTAAAAAGGCTGCCACCAACTCGTGTGGGCTTTTAA
1 AAAAGTTGCCACCAACTCGTGT-GGCATTTTGAAAAGGTTGCCACCAACTCGTATGGGCTTTTGA
* * * ** * *
356106 AAAAGTTACCACCATTTCGTGA-GGGCTTTTA
65 AAAGGTTGCCAACAACTAGT-ATGGGCTTTCA
* * * * * ***
356137 AAAATTTTGCC-CTCAACTTGTGTGG-ACTTTGAATATGG-TGCCACCAACTTGTATATAC-TTT
1 AAAA-GTTGCCAC-CAACTCGTGTGGCATTTTGAA-AAGGTTGCCACCAACTCGTATGGGCTTTT
* * **
356198 GAAAAGGTTACCACCAACT--TATGAAGGCTTCTGG
63 GAAAAGGTTGCCAACAACTAGTATG--GGCTT-TCA
* * * * * * * * *
356232 AAAAGTTGCCACCTACTCGTATGG-ACTTTGACTATAGG--GCAATCAACTCGTGTAGAC-TTTG
1 AAAAGTTGCCACCAACTCGTGTGGCATTTTGA--AAAGGTTGCCACCAACTCGTATGGGCTTTTG
* * * * * *
356293 AAAAGGTTGCCACCAACTTGTGTAGAC-TTCG
64 AAAAGGTTGCCAACAACTAGTATGGGCTTTCA
* * * * * *
356324 AAAAGTTTACCACCAACTCTTATAGG--TTATTGAAAAGGTTGCCACCAACTCATGTGGAC-TTT
1 AAAAG-TTGCCACCAACTCGTGT-GGCATT-TTGAAAAGGTTGCCACCAACTCGTATGGGCTTTT
* * * * * * ** ** *
356386 AAAAAAGTTTCCACCAATTCGGGTAAGCTTTTGA
63 GAAAAGGTTGCCAACAACTAGTATGGGC-TTTCA
* * * * * * * * * * * *
356420 AAAGGTTACCACCAACTTGTGTAGCCTTCTGAAAAGGTTACCACCAACTCATGTGGAC-TATGAC
1 AAAAGTTGCCACCAACTCGTGTGGCATTTTGAAAAGGTTGCCACCAACTCGTATGGGCTTTTGAA
* * * * * ** *
356484 TATGTTGCC-CCAAACTTGTGTGAACTTTGA
66 AAGGTTGCCAAC-AACTAGTATGGGCTTTCA
* * * * *
356514 AAAGGTTGCCACCAACTCGTGTGAG-TTTTTGAAAAGGTTGCCACCAACTCGTGTGGACTTTTTA
1 AAAAGTTGCCACCAACTCGTGTG-GCATTTTGAAAAGGTTGCCACCAACTCGTATGGGCTTTTGA
* * *
356578 AACGGTTGCCAACAAATCTCG--TGGGCTTTGA
65 AAAGGTTGCCAAC-AA-CTAGTATGGGCTTTCA
* * * * * * ** *
356609 AAAGGTTGCCACCAACTCGTGTGGGC-TTTTAAAAAGGTTACCACAAACTCATGTAAGCCTTTGA
1 AAAAGTTGCCACCAACTCGTGT-GGCATTTTGAAAAGGTTGCCACCAACTCGTATGGGCTTTTGA
* * * * ** *
356673 AATGGTTGCTACCAAC-ACGTGTGGAATTTTA
65 AAAGGTTGCCAACAACTA-GTATGGGCTTTCA
* * ** * * * * *
356704 AAAAGGTTACCACCAACTCGTGCGAAATTTTGAAAAAGTTGTCACTAACTTGTGTGGGCTTTTGA
1 AAAA-GTTGCCACCAACTCGTGTGGCATTTTGAAAAGGTTGCCACCAACTCGTATGGGCTTTTGA
* * ** * * *
356769 AAAGGTTACCACCAACTCTTGTAGACTTTTCA
65 AAAGGTTGCCAACAACTAGTATGGGC-TTTCA
* * ** *
356801 AAAGGTTGCCACCAACTCGTGTGG-ATATTGAAATA-GTTGCTTCCAACTCGTTTGGGCTTTTGA
1 AAAAGTTGCCACCAACTCGTGTGGCATTTTGAAA-AGGTTGCCACCAACTCGTATGGGCTTTTGA
* ** * * * **
356864 AAAGGTTGCCACCAACTCCTGTAGACTTTTG
65 AAAGGTTGCCAACAACTAGTATGGGCTTTCA
* * *** * * * * *
356895 AAAGGTTTCTGTCAACTCGTGTAG-ACTTTGAAATGGTTGCCAGCAACTCGTGTGGGCTTTTGAA
1 AAAAGTTGCCACCAACTCGTGTGGCATTTTGAAAAGGTTGCCACCAACTCGTATGGGCTTTTGAA
* * *
356959 AAGGTTACCACCAAC-A-TATGTAGGCTTTTGA
66 AAGGTTGCCAACAACTAGTATG--GGC-TTTCA
* * * * * * * * **
356990 AAAGGTTACTACCAACTCATGTAG-ACTTT-AACTATA-G-TGCCACAAACTCGTGTGAAC-TTT
1 AAAAGTTGCCACCAACTCGTGTGGCATTTTGAA--A-AGGTTGCCACCAACTCGTATGGGCTTTT
* * * ** *
357050 GAAAAGGTTACCACCAACTCGCGTGGGCTTTTA
63 GAAAAGGTTGCCAACAACTAGTATGGGCTTTCA
* * * * * * * *
357083 AAATGGTTACCACCAACTCGTGTGGGATTTTGTAAAA-GTTACCATCAACTCGTGTGAGCTTTTA
1 AAA-AGTTGCCACCAACTCGTGTGGCATTTTG-AAAAGGTTGCCACCAACTCGTATGGGCTTTTG
* * * * * *
357147 AAAATGTTGCCAACAACTCGTGTAGGATTTGA
64 AAAAGGTTGCCAACAACTAGTATGGGCTTTCA
* * * * * * *
357179 AAAGGTTGCCACCAACTCGTGT-GAACTTTTGAAAATGTTGCCAACAACTTGTGTGGAC-TTTGA
1 AAAAGTTGCCACCAACTCGTGTGGCA-TTTTGAAAAGGTTGCCACCAACTCGTATGGGCTTTTGA
** * *
357242 AAAGGTTGTTACCAACT--TATGTGAGCTTTGGA
65 AAAGGTTGCCAACAACTAGTATG-G-GCTTT-CA
* * * * * * * * *
357274 AAATGTTGCTACCAACTCATATGGGATTTTGAAAAGGTTGTCACCAACTTGTGTGAGCTTTTGAA
1 AAAAGTTGCCACCAACTCGTGTGGCATTTTGAAAAGGTTGCCACCAACTCGTATGGGCTTTTGAA
* *
357339 AAGGTTGCCAACAA-T-TTATGTGGACTTTGA
66 AAGGTTGCCAACAACTAGTATG-GG-CTTTCA
* *
357369 AAAGGTTGTCACCAACTCGTGTGGGC-TTTTGAAAAGGTTGCCACCAAC
1 AAAAGTTGCCACCAACTCGTGT-GGCATTTTGAAAAGGTTGCCACCAAC
357417 ACTTGTAGAC
Statistics
Matches: 3721, Mismatches: 949, Indels: 569
0.71 0.18 0.11
Matches are distributed among these distances:
80 73 0.02
81 34 0.01
82 5 0.00
83 6 0.00
84 3 0.00
85 2 0.00
87 2 0.00
88 4 0.00
89 61 0.02
90 8 0.00
91 10 0.00
92 54 0.01
93 385 0.10
94 1044 0.28
95 1299 0.35
96 476 0.13
97 35 0.01
98 3 0.00
99 1 0.00
100 2 0.00
101 17 0.00
102 116 0.03
103 49 0.01
104 32 0.01
ACGTcount: A:0.28, C:0.20, G:0.22, T:0.30
Consensus pattern (95 bp):
AAAAGTTGCCACCAACTCGTGTGGCATTTTGAAAAGGTTGCCACCAACTCGTATGGGCTTTTGAA
AAGGTTGCCAACAACTAGTATGGGCTTTCA
Found at i:352914 original size:125 final size:121
Alignment explanation
Indices: 352740--353077 Score: 331
Period size: 120 Copynumber: 2.8 Consensus size: 121
352730 CAACTCATGT
* * * * * *
352740 GGGCTTCTGAAAAGGATGCCCCCAAACTCCTTTGGACATTGACTATGGTGCCACCAACTGGTATA
1 GGGCTTTTGAAAAGGATG-CCACAAACTCGTGTGGACTTTGACTATGGTGCCACCAACTCGTATA
** * *
352805 GA-TGTTGGAAAGCTTGCCACCAACTCGTGTAGACTTTGAAAAGGTTTTTACCAAT-TCGTGC
65 GACT-TTAAAAAGATTGCCACCAACTCGTGTAGACTTTGAAAAGG---TTACCAATAAC-T-C
* * * * *
352866 GGGCTTTTGAAAAGGCTGCCACTAACTCGTGTGGACTTTGACTATGGTGCCAGCAACACGTATGG
1 GGGCTTTTGAAAAGGATGCCACAAACTCGTGTGGACTTTGACTATGGTGCCACCAACTCGTATAG
* * * *
352931 ACTTTAAAAAGATTGCCACCAACTCGTGTGGGCTTTGAAAAGGTTACCACTAACTT
66 ACTTTAAAAAGATTGCCACCAACTCGTGTAGACTTTGAAAAGGTTACCAATAACTC
* * * * * * * *
352987 GTG-TTTTGAAAAAGTTGCCACCAACTCGTGTGGACTTTGACAATGGTGCCACCAACTCATGTGG
1 GGGCTTTTGAAAAGGATGCCACAAACTCGTGTGGACTTTGACTATGGTGCCACCAACTCGTATAG
* *
353051 ACTTTAAAAAGGTTGCCACTAACTCGT
66 ACTTTAAAAAGATTGCCACCAACTCGT
353078 AAGTTGCCAC
Statistics
Matches: 180, Mismatches: 30, Indels: 10
0.82 0.14 0.05
Matches are distributed among these distances:
120 78 0.43
121 2 0.01
122 8 0.04
123 1 0.01
125 74 0.41
126 17 0.09
ACGTcount: A:0.27, C:0.22, G:0.23, T:0.28
Consensus pattern (121 bp):
GGGCTTTTGAAAAGGATGCCACAAACTCGTGTGGACTTTGACTATGGTGCCACCAACTCGTATAG
ACTTTAAAAAGATTGCCACCAACTCGTGTAGACTTTGAAAAGGTTACCAATAACTC
Found at i:352994 original size:27 final size:27
Alignment explanation
Indices: 352936--353017 Score: 74
Period size: 27 Copynumber: 2.9 Consensus size: 27
352926 TATGGACTTT
*
352936 AAAAAGATTGCCACCAACTCGTGTGGGCTTTG
1 AAAAAG-TTACCACCAACTCGTGT----TTTG
* * *
352968 AAAAGGTTACCACTAACTTGTGTTTTG
1 AAAAAGTTACCACCAACTCGTGTTTTG
*
352995 AAAAAGTTGCCACCAACTCGTGT
1 AAAAAGTTACCACCAACTCGTGT
353018 GGACTTTGAC
Statistics
Matches: 42, Mismatches: 8, Indels: 5
0.76 0.15 0.09
Matches are distributed among these distances:
27 23 0.55
31 14 0.33
32 5 0.12
ACGTcount: A:0.30, C:0.21, G:0.21, T:0.28
Consensus pattern (27 bp):
AAAAAGTTACCACCAACTCGTGTTTTG
Found at i:353278 original size:32 final size:32
Alignment explanation
Indices: 353080--353726 Score: 473
Period size: 32 Copynumber: 20.6 Consensus size: 32
353070 TAACTCGTAA
* *
353080 GTTGCCACCAATTCGTGT-GGATTTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * * *
353111 TTTGCCACCAACTTGTGTGGGCTTTTTAAAAT
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * * *
353143 ATTG-TACCAACTCGTGTAGAC-TTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * * *
353173 GTTACCACCAACACGT-TAGGCTTTTGAAACG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* *** *
353204 GTTGCCACCAAATTAAGTGGGC-TTTGAAAAT
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * *
353235 GTTACCACCAATTCTTGTGGGCTTTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
** * * * *
353267 GTTGCTGCCAATTCCTATAGGCTTTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* ** * * *
353299 GTTTCCAATATCTCGTTTAGG-TTTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
*** *
353330 GTTATGACCAACTCGTGTGGACTTTT-ACAGAA-
1 GTTGCCACCAACTCGTGTGGGCTTTTGA-A-AAG
353362 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* *
353394 GTTGCTACCAACTCGTGTGGGATTTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* *
353426 GTTGCCACCAACTCATGTGGGATTTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * *
353458 ATTGCCACCAACTCGTATGAGCTTTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * * * *
353490 GTTGCCAACAACTTGTGTGGAC-TCTAAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* *
353521 GTTGTCACCAACTCGTGTGGGATTTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * *
353553 GTTGCCATCAACTCGTATGGGC-TTTGAGAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * * * * * *
353584 GTTACCACTAACTTGTGTGGAC-TTCGACTATG
1 GTTGCCACCAACTCGTGTGGGCTTTTGA-AAAG
* * *
353616 G-TGCCGCCAACTTGTGTGGAC-TTTGAAAAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
* * * *
353646 ATTGCCAACAACTTACGTGT--AC-TTTGAAAAT
1 GTTGCCACCAAC-T-CGTGTGGGCTTTTGAAAAG
* * * *
353677 TTTACCACAAACTCGTGTGGGCTTTT-AATAG
1 GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
353708 GTTGCCACCAACTCGTGTG
1 GTTGCCACCAACTCGTGTG
353727 AACTTTAACT
Statistics
Matches: 477, Mismatches: 121, Indels: 36
0.75 0.19 0.06
Matches are distributed among these distances:
29 5 0.01
30 16 0.03
31 223 0.47
32 226 0.47
33 7 0.01
ACGTcount: A:0.27, C:0.19, G:0.23, T:0.31
Consensus pattern (32 bp):
GTTGCCACCAACTCGTGTGGGCTTTTGAAAAG
Found at i:353395 original size:64 final size:64
Alignment explanation
Indices: 353085--353732 Score: 388
Period size: 62 Copynumber: 10.3 Consensus size: 64
353075 CGTAAGTTGC
* * * * ** *
353085 CACCAATTCGTGTGGA-TTTTGAAAAGTTTGCCACCAACTTGTGTGGGCTTTTTAAAATATTGT
1 CACCAACTCGTGTGGACTTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTAT
* * * * * **
353148 -ACCAACTCGTGTAGAC-TTTGAAAAGGTTACCACCAACACGT-TAGGCTTTTGAAACGGTTGC
1 CACCAACTCGTGTGGACTTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTAT
* *** * * * * * *
353209 CACCAAATTAAGTGGGC-TTTGAAAATGTTACCACCAATTCTTGTGGGCTTTTGAAAAGGTT-G
1 CACCAACTCGTGTGGACTTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTAT
* * * * * ** * * *
353271 CTGCCAATTCCTATAGG-CTTTTGAAAAGGTTTCCAATATCTCGTTTAGG-TTTTGAAAAGGTTA
1 C-ACCAACTCGTGT-GGACTTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTA
353334 T
64 T
*
353335 GACCAACTCGTGTGGACTTTT-ACAGAA-GTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTT-
1 CACCAACTCGTGTGGACTTTTGA-A-AAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTA
*
353397 G
64 T
* * * *
353398 CTACCAACTCGTGTGGGA-TTTTGAAAAGGTTGCCACCAACTCATGTGGGATTTTGAAAAGATTG
1 C-ACCAACTCGTGT-GGACTTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTA
*
353462 C
64 T
* * * * * * *
353463 CACCAACTCGTAT-GAGCTTTTGAAAAGGTTGCCAACAACTTGTGTGGAC-TCTAAAAAGGTTGT
1 CACCAACTCGTGTGGA-CTTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTAT
* * * *
353526 CACCAACTCGTGTGGGA-TTTTGAAAAGGTTGCCATCAACTCGTATGGGC-TTTGAGAAGGTTAC
1 CACCAACTCGTGT-GGACTTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTAT
* * * * * * * * * **
353589 CACTAACTTGTGTGGAC-TTCGACTATGG-TGCCGCCAACTTGTGTGGAC-TTTGAAAAGATTGC
1 CACCAACTCGTGTGGACTTTTGA-AAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTAT
* ** * * * *
353651 CAACAACTTACGTGT--AC-TTTGAAAATTTTACCACAAACTCGTGTGGGCTTTT-AATAGGTTG
1 CACCAAC-T-CGTGTGGACTTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTA
*
353712 C
64 T
*
353713 CACCAACTCGTGTGAACTTT
1 CACCAACTCGTGTGGACTTT
353733 AACTATGGTA
Statistics
Matches: 449, Mismatches: 107, Indels: 58
0.73 0.17 0.09
Matches are distributed among these distances:
60 5 0.01
61 16 0.04
62 146 0.33
63 146 0.33
64 129 0.29
65 7 0.02
ACGTcount: A:0.27, C:0.19, G:0.23, T:0.31
Consensus pattern (64 bp):
CACCAACTCGTGTGGACTTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTAT
Found at i:354014 original size:31 final size:31
Alignment explanation
Indices: 353979--354085 Score: 110
Period size: 31 Copynumber: 3.5 Consensus size: 31
353969 TTGACTATGG
*
353979 TGCCACCAACTTGTATAGACTTTGGAAAA-CT
1 TGCCACCAACTCGTATAGACTTT-GAAAAGCT
* *
354010 TGCCACCAACTCGTGTAGACTTTGAAAAGGT
1 TGCCACCAACTCGTATAGACTTTGAAAAGCT
* * * *
354041 TACCACCAACTCG-CTAGGCTTTTGAAAAGGT
1 TGCCACCAACTCGTATAGAC-TTTGAAAAGCT
*
354072 TGCTACCAACTCGT
1 TGCCACCAACTCGT
354086 TTGGGCTTTT
Statistics
Matches: 65, Mismatches: 8, Indels: 5
0.83 0.10 0.06
Matches are distributed among these distances:
30 9 0.14
31 56 0.86
ACGTcount: A:0.29, C:0.25, G:0.19, T:0.27
Consensus pattern (31 bp):
TGCCACCAACTCGTATAGACTTTGAAAAGCT
Found at i:354123 original size:40 final size:40
Alignment explanation
Indices: 354058--354137 Score: 99
Period size: 40 Copynumber: 2.0 Consensus size: 40
354048 AACTCGCTAG
* * *
354058 GCTTTTGAAAAGGTTGCTACCAACTCGTT-TGGGCTTTTGA
1 GCTTTTGAAAAGATTGCCACCAACTC-TTGTGGACTTTTGA
**
354098 GCTTTTGAAAAGATTGCCAGTAACTCTTGTGGACTTTTGA
1 GCTTTTGAAAAGATTGCCACCAACTCTTGTGGACTTTTGA
354138 AAGACTGCCA
Statistics
Matches: 34, Mismatches: 5, Indels: 2
0.83 0.12 0.05
Matches are distributed among these distances:
39 2 0.06
40 32 0.94
ACGTcount: A:0.23, C:0.16, G:0.24, T:0.38
Consensus pattern (40 bp):
GCTTTTGAAAAGATTGCCACCAACTCTTGTGGACTTTTGA
Found at i:354178 original size:31 final size:31
Alignment explanation
Indices: 354099--354178 Score: 99
Period size: 31 Copynumber: 2.5 Consensus size: 31
354089 GGCTTTTGAG
*
354099 CTTTTGAAAAGATTGCCAGTAACTCTTGTGGA
1 CTTTTG-AAAGATTGCCAGTAACTCATGTGGA
* *
354131 CTTTTGAAAGACTGCCATTAACTCATGTGGA
1 CTTTTGAAAGATTGCCAGTAACTCATGTGGA
*
354162 C-TTTGAAATGGTTGCCA
1 CTTTTGAAA-GATTGCCA
354179 CAAATTCGTG
Statistics
Matches: 42, Mismatches: 5, Indels: 3
0.84 0.10 0.06
Matches are distributed among these distances:
30 7 0.17
31 29 0.69
32 6 0.14
ACGTcount: A:0.28, C:0.17, G:0.21, T:0.34
Consensus pattern (31 bp):
CTTTTGAAAGATTGCCAGTAACTCATGTGGA
Found at i:354361 original size:32 final size:31
Alignment explanation
Indices: 354295--360938 Score: 1324
Period size: 32 Copynumber: 209.1 Consensus size: 31
354285 TGGGCCTTCG
* * *
354295 AAAGGTTGCTACCAACTCGTGTGGATTTTAA
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
* *
354326 AAAGGTTACCACGAACTCGTGCGGGATTTTGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* * *
354358 AAAGGTTGCCACCAACACATGTGGGCTTTTGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* * *
354390 AAAGGTTGCCAACAACTTC-TGTGGACTTTGA
1 AAAGGTTGCCACCAAC-TCGTGGGGATTTTGA
* * *
354421 AAAAGTTGTCACCAACTCGTGTGGGCTTTTGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* * ***
354453 AGAGGTTGCCACCAACTCTTACAGACTTTTGA
1 AAAGGTTGCCACCAACTCGTGGGGA-TTTTGA
* * *
354485 AAAGGTAT-CCACCTACTTATGTGGGCTTTTGGGCTTTTGA
1 AAAGGT-TGCCACCAAC-T-CGT--G-----GGGATTTTGA
* * **
354525 AAAGGTTGACACCAACTCTTATGGACTTTTGA
1 AAAGGTTGCCACCAACTCGTGGGGA-TTTTGA
* * ** * * *
354557 ATA-GTTGCTATTAACTCATGTGGACTTTGA
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
* * * * *
354587 AATGGTTACCACCAATTCATGTGGATTTTTGA
1 AAAGGTTGCCACCAACTCGTGGGGA-TTTTGA
*
354619 AAAGGTTGCCACCAACTCGTGTGGATTTTTGA
1 AAAGGTTGCCACCAACTCGTGGGGA-TTTTGA
* * * *
354651 AAAGGTTGCCACCAACTCCTATGGGCTTTTAA
1 AAAGGTTGCCACCAACTCGT-GGGGATTTTGA
* * * * *
354683 AAAGGTTGCCAACAACTCATTTGGG-CTTTCA
1 AAAGGTTGCCACCAACTC-GTGGGGATTTTGA
* * *
354714 AAAGGTTGCCACCAACTCGTGTGGACATTTGT
1 AAAGGTTGCCACCAACTCGTGGGGA-TTTTGA
* *
354746 AAAGCTTACCACCAACTCGTGGGGGATTTTG-
1 AAAGGTTGCCACCAACTCGT-GGGGATTTTGA
* *
354777 AAAGGTTGCCAGCAACTCGTATGGGATTTTGA
1 AAAGGTTGCCACCAACTCGT-GGGGATTTTGA
* * * *
354809 AAATGTTGCTAGCAACTCGTGTGGGCTTTTGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* * * * * *
354841 AAAGGTTGCCAACAGCTTGAGTGGACTTTGA
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
* * *
354872 AATGGTTGTCACCAACTCGTGTGAGATTTTGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* * * * *
354904 AAAGTTTGCCACCAACGCATGTAGGATTTCGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* * * * *
354936 AAATGTTACCACCAATTTGTGTGGGCTTTTGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* * * * * *
354968 AAAAGTTGCCAACAACTTGTGTGGACTTCGA
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
* ** * **
354999 AAAGGTTGCTAATAACTCTTGTAGACTTTTGA
1 AAAGGTTGCCACCAACTCGTGGGGA-TTTTGA
* * ** *
355031 AAAAGTTTCCACCAACTCGTGTAGACTTT-A
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
355061 AAATGGTTGCCACCAACTCGTGTGGGCATTTGAGCTTTTGA
1 AAA-GGTTGCCACCAACTC--GTGGG-----GA--TTTTGA
* * ** *
355102 AAAGGTTACCACCAACTCTTTTAGGCTTTTG-
1 AAAGGTTGCCACCAACTC-GTGGGGATTTTGA
* * *
355133 AAAGGTTGCCATCAACTCGTGTGGACTTTGA
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
* * * **
355164 AATGGTTGCCACCAACTAGTGTGGACATTGA
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
* * * * * * *
355195 AAGGGTTGCCACCAATTAGTTTGTGCTTTTAA
1 AAAGGTTGCCACCAACTCG-TGGGGATTTTGA
* * * *
355227 AAAGGTTGCCAGCAGCTCGTGTGGACTTTGA
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
* * * *
355258 AAAGTTTGCCACTAACTCATAGGGG-CTTTGA
1 AAAGGTTGCCACCAACTCGT-GGGGATTTTGA
* * *** * * *
355289 AAAAGTTACCTTTAACTTGTGTGGAATTTGA
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
* * ** ** *
355320 AAAGGTTGCTATCAACTTATGTGGCCTTTTAA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
** * *
355352 AAAGGCAGCCAACAACTCGTGTGGGCTTTTG-
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* * * *
355383 AAAGATTGCCACCAACTCATGTGGACTTTGA
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
* * *
355414 AAAGGTTGCCACTAACTCGTATGGG-CTTTGA
1 AAAGGTTGCCACCAACTCGT-GGGGATTTTGA
* * ** *
355445 AAAGGTTACCACCAACTCCTATGGACTTTGA
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
* * * *
355476 AAAGGTTGCTATCAACTCGTGTAGG-TTTTTA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
*** * *
355507 AAAGGGCAACCACCAACTCGTATGGGCTTTTGA
1 AAA-GGTTGCCACCAACTCGT-GGGGATTTTGA
* * * * *
355540 AAAGGTTTCCACCAACTCATGTAGGCTTTCGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
*** * ** * *
355572 AAATAATACCACCAAGGCGTGTGGACTTTGA
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
* * *** *
355603 CTATAGG--GCCACCAACTTGTATAGACTTTGA
1 --AAAGGTTGCCACCAACTCGTGGGGATTTTGA
** ** * *
355634 AAATATTGCCACCTGCTCGTATGAGCA-TTTGA
1 AAAGGTTGCCACCAACTCG--TGGGGATTTTGA
* * *
355666 AAAGGTTAG-CACCAACTCGTGTGAACTTTGA
1 AAAGGTT-GCCACCAACTCGTGGGGATTTTGA
* * * **
355697 AATGGTTGCCTCCAACTAGTGTAGACTTTTGA
1 AAAGGTTGCCACCAACTCGTGGGGA-TTTTGA
* *** * *
355729 AATGGTTGCCACCAACTCGTGTATACTTTAA
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
* * * * * *
355760 AAATGTTGCTACCAACTCGTGTTGG-CTATAA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
*
355791 AAAGGTTGCCACCAACTCGTGCGGATTTTGA
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
* * * *
355822 AAAGGTTGCCATCAACTCGTGTAGGCTTTTAA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* * * * * *
355854 AAAGGCTGCCATCAACTCATGTAGGCTTTTAA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* * * * *
355886 AAAAGTTGCCATCAACTAGTGTGGACTTTGA
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
* * ** **
355917 AAAAGTTGCCCCCAACGAGTATGGACTTTTGA
1 AAAGGTTGCCACCAACTCGTGGGGA-TTTTGA
* * ** * * **
355949 AAAGATTACCATAAACTTGTGTGGACATTGA
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
* * *
355980 CAAGGTTGCCACTAACTCGTGTGGG-CTTTGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* * ** *
356011 AAAAGTTACCACCAACTCGTGTAGACTTTGA
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
* * * *
356042 AAAGGTTGCCATCAAGTCATGTGGGCA-TTTAA
1 AAAGGTTGCCACCAACTC--GTGGGGATTTTGA
* * *
356074 AAAGGCTGCCACCAACTCGTGTGGGCTTTTAA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* * ** * *
356106 AAAAGTTACCACCATTTCGTGAGGGCTTTTAA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
** * * *
356138 AAATTTTGCC-CTCAACTTGTGTGGACTTTGA
1 AAAGGTTGCCAC-CAACTCGTGGGGATTTTGA
* * **** *
356169 ATATGG-TGCCACCAACTTGTATATACTTTGA
1 A-AAGGTTGCCACCAACTCGTGGGGATTTTGA
* ** * * *
356200 AAAGGTTACCACCAACTTATGAAGGCTTCTGGA
1 AAAGGTTGCCACCAACTCGTG-GGGATT-TTGA
* ** *
356233 AAA-GTTGCCACCTACTCGTATGGACTTTGA
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
* * * ** *
356263 CTATAGG--GCAATCAACTCGTGTAGACTTTGA
1 --AAAGGTTGCCACCAACTCGTGGGGATTTTGA
* ** * *
356294 AAAGGTTGCCACCAACTTGTGTAGACTTCGA
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
* * * **
356325 AAAGTTTACCACCAACTCTTATAGG-TTATTGA
1 AAAGGTTGCCACCAACTCGT-GGGGATT-TTGA
* * * *
356357 AAAGGTTGCCACCAACTCATGTGGACTTTAA
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
* * * * *
356388 AAAAGTTTCCACCAATTCG-GGTAAGCTTTTGA
1 AAAGGTTGCCACCAACTCGTGG--GGATTTTGA
* * * ** *
356420 AAAGGTTACCACCAACTTGTGTAGCCTTCTGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* * * * *
356452 AAAGGTTACCACCAACTCATGTGGACTATGA
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
** * * * * *
356483 CTATGTTGCC-CCAAACTTGTGTGAACTTTGA
1 AAAGGTTGCCACC-AACTCGTGGGGATTTTGA
* *
356514 AAAGGTTGCCACCAACTCGTGTGAGTTTTTGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* *
356546 AAAGGTTGCCACCAACTCGTGTGGACTTTTTA
1 AAAGGTTGCCACCAACTCGTGGGGA-TTTTGA
* * *
356578 AACGGTTGCCAACAAATCTCGT-GGG-CTTTGA
1 AAAGGTTGCC-ACCAA-CTCGTGGGGATTTTGA
* *
356609 AAAGGTTGCCACCAACTCGTGTGGGCTTTTAA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* * * ** **
356641 AAAGGTTACCACAAACTCATGTAAGCCTTTGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* * * * *
356673 AATGGTTGCTACCAACACGTGTGGAATTTTAA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* **
356705 AAAGGTTACCACCAACTCGTGCGAAATTTTGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* * * * *
356737 AAAAGTTGTCACTAACTTGTGTGGGCTTTTGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* * ** *
356769 AAAGGTTACCACCAACTCTTGTAGACTTTTCA
1 AAAGGTTGCCACCAACTCGTGGGGA-TTTTGA
* *
356801 AAAGGTTGCCACCAACTCGTGTGGATATTGA
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
** * *
356832 AATA-GTTGCTTCCAACTCGTTTGGGCTTTTGA
1 AA-AGGTTGCCACCAACTCG-TGGGGATTTTGA
* **
356864 AAAGGTTGCCACCAACTCCTGTAGACTTTTG-
1 AAAGGTTGCCACCAACTCGTGGGGA-TTTTGA
* *** ** *
356895 AAAGGTTTCTGTCAACTCGTGTAGACTTTGA
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
* * *
356926 AATGGTTGCCAGCAACTCGTGTGGGCTTTTGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* * * *
356958 AAAGGTTACCACCAACAT-ATGTAGGCTTTTGA
1 AAAGGTTGCCACCAAC-TCGTG-GGGATTTTGA
* * * ** *
356990 AAAGGTTACTACCAACTCATGTAGACTTT-A
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
* * * *
357020 ACTATA-G-TGCCACAAACTCGTGTGAACTTTGA
1 A--A-AGGTTGCCACCAACTCGTGGGGATTTTGA
* * *
357052 AAAGGTTACCACCAACTCGCGTGGGCTTTT-A
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
*
357083 AAATGGTTACCACCAACTCGTGTGGGATTTTGTA
1 AAA-GGTTGCCACCAACTCGTG-GGGATTTTG-A
* * * * *
357117 AAA-GTTACCATCAACTCGTGTGAGCTTTTAA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* * *
357148 AAATGTTGCCAACAACTCGTGTAGGA-TTTGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* *
357179 AAAGGTTGCCACCAACTCGTGTGAACTTTTGA
1 AAAGGTTGCCACCAACTCGTGGGGA-TTTTGA
* * * * *
357211 AAATGTTGCCAACAACTTGTGTGGACTTTGA
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
** ** * * *
357242 AAAGGTTGTTACCAACTTATGTGAGCTTTGGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* * * *
357274 AAATGTTGCTACCAACTCATATGGGATTTTGA
1 AAAGGTTGCCACCAACTCGT-GGGGATTTTGA
* * * *
357306 AAAGGTTGTCACCAACTTGTGTGAGCTTTTGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* * ** * *
357338 AAAGGTTGCCAACAATTTATGTGGACTTTGA
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
* *
357369 AAAGGTTGTCACCAACTCGTGTGGGCTTTTGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* * **
357401 AAAGGTTGCCACCAACACTTGTAGACTTTTGA
1 AAAGGTTGCCACCAACTCGTGGGGA-TTTTGA
* ** *** * *
357433 AAATGTTATCACCAACTCGTGCAAACTATGA
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
* *
357464 AATGGTTGCCTCCAACTTCTGTGGGCTTTTGGACTTTTGA
1 AAAGGTTGCCACCAAC-TC-GT-GG-----GGA-TTTTGA
* * * *
357504 AAAGGTTGCCACCATCTCATGTGGACTTTGA
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
* * * * ** *
357535 AAAGGTTGACAGCAACTCATATGGTCTTTTAA
1 AAAGGTTGCCACCAACTCGT-GGGGATTTTGA
* * * * ** * *
357567 AAAAGCTGCGACCAATTCGTTTTTGCA-TTTGT
1 AAAGGTTGCCACCAACTCG--TGGGGATTTTGA
* * * *
357599 AAAGATTGCTACCAACTCATGTGGGCTTTTGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* * *
357631 AAATGTTGCCACCAACTCGTGTGGACTTTGA
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
**** * * *
357662 CTTTGTTGCCACCAACTCGTGTGTACTTTGA
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
* * * * *** * *
357693 CTATGG-TGCCACTAACTTGTATAGACTTTAA
1 -AAAGGTTGCCACCAACTCGTGGGGATTTTGA
* * * ** *
357724 AAAAGTTTCCAGCAACTCGTGTCAGCTTTTGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
** * * *
357756 AAATATT-ACACCCAACTCGTGTGGACTTTGA
1 AAAGGTTGCCA-CCAACTCGTGGGGATTTTGA
* * ** *** * *
357787 CTATGG-TGCCATAAACTCGTGTAAACTTTGT
1 -AAAGGTTGCCACCAACTCGTGGGGATTTTGA
* *
357818 AAAGGTTGCCACCAACTCCTGTGGGCTTTTGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
** * * *
357850 AAAGGTTGCCAAAAACTTGTTTGGG-CTTTGA
1 AAAGGTTGCCACCAACTCG-TGGGGATTTTGA
** * * * *
357881 AAATCTTGCCACCAATTCATGTGGATTTTTGT
1 AAAGGTTGCCACCAACTCGTGGGGA-TTTTGA
* * * *
357913 AAAGGGTGCCAACAACTCGTGTGTGCTTTTGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* ** * *
357945 AAAGGTTACCACCAACTCGTGTCGACCTTGGA
1 AAAGGTTGCCACCAACTCGTGGGGA-TTTTGA
**
357977 AAAGGTTGTTACCAACTCGTGTGGGATTTTGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* *
358009 AATAGTGTT---ACCAACTCGAGTGGGACTTT-A
1 AA-AG-GTTGCCACCAACTCGTG-GGGATTTTGA
* * *
358039 AAAGGGTTGCCACTAACTCGTTTGGGCTTTTGA
1 AAA-GGTTGCCACCAACTCG-TGGGGATTTTGA
* * *
358072 AAAGGTTGCCAACAACTTGTGTGGATTTTGA
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
** * *
358103 AAAGGTTGTTACCAACCCGTCTGGGCA-TTTGA
1 AAAGGTTGCCACCAACTCG--TGGGGATTTTGA
* * * * * *
358135 AAAAGTTTCCAACAACTTGTGTGGACTTTGA
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
** * ** * *
358166 AAAGGTTATCACCAACAC-TGTATGTTTTTTA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* * *
358197 AAAGATTGCCACCAACTCATGTGCGATTTTGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* *
358229 AAAGGTTTCCACCAACTCGTGTGGGCTTTTGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* * ** ** * *
358261 AAATGTTGCCAACAACTTATGTTGACTTCGA
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
*** * * **
358292 AAAGGTTATTACTAACTCGCGTAGACTTTTGA
1 AAAGGTTGCCACCAACTCGTGGGGA-TTTTGA
**
358324 AAAGGTTGCCACCAACTC-TCGCAGACTTTTGA
1 AAAGGTTGCCACCAACTCGT-GGGGA-TTTTGA
* * *
358356 AAAGGTTACCACCAATTCGTATGAATTTTTGGGCTTTTGA
1 AAAGGTTGCCACCAACTCG--TG-------GGGATTTTGA
* *
358396 AAAGGTTGCCACCAACAT-GTGTGGACTTTGA
1 AAAGGTTGCCACCAAC-TCGTGGGGATTTTGA
* * * *
358427 AAAGGTTGCGATCAA-TGCGTGTGGG-CTTTAA
1 AAAGGTTGCCACCAACT-CGTG-GGGATTTTGA
* * * *
358458 ATAAGGCTGCTACCAACTCGCGTGGGCTTTTGA
1 A-AAGGTTGCCACCAACTCGTG-GGGATTTTGA
* * * * *
358491 AATGGTTCCCATCAACTCATGTAGGCA-TTTGA
1 AAAGGTTGCCACCAACTC--GTGGGGATTTTGA
* * * * * *
358523 AAATGTTACCACGATCTCGTGTGGACTTTGA
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
* * ** *** *
358554 CTATGG-TGCCACCAACTTTTATAGACTTTGA
1 -AAAGGTTGCCACCAACTCGTGGGGATTTTGA
* ** * * *
358585 AAAAGTTGCCACCAACTAATGTGAGCTTCTGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* * **** * **
358617 AAATGTTAGACTTTGACT-AT--GG-TGCT-A
1 AAAGGTT-GCCACCAACTCGTGGGGATTTTGA
** * **** * *** **
358644 AAAACTCG-TGTGAACT-TTGAAAAGGTT-A
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
** **** *** * **** *
358672 CCA-CCAACTCATGTGGACT-TTTAAAATAGTTGCCA
1 AAAGGTTGC-CA--CCAACTCGTGGGGAT-TTTG--A
* ** * * * ** *** *
358707 CCAACTTATG-TA--GATTTTTGAAAATATT-A
1 -AAAGGT-TGCCACCAACTCGTGGGGATTTTGA
** *** *** ***
358736 CCA-----CCAACTCGTGT-G-GGCCTTTGAAA
1 AAAGGTTGCC-AC-CAACTCGTGGGGATTTTGA
** * * * ** **
358762 AGGTTGCTAGCAACTC-A-T-GTGGGCTTTTAAA
1 A--AAGGTTGCCAC-CAACTCGTGGGGATTTTGA
* * * *** *
358793 AATG-TTGCCACTAACTCATGTATATTTTTAA
1 AAAGGTTGCCACCAACTCGTGGGGA-TTTTGA
** * * **
358824 AAATATTACCACCAACTCGTGTGAGCCTTTGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* * *
358856 AAAGGTTGCTACTAACTCGTGTAGGATTTTGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* *
358888 AAAGGTTCCCACCAACTCGAGTGGGATTTTGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* * *
358920 AAAGGTTACCACCAACTCGTGTGGGCTTGTGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* * *
358952 AAAGGTTGCCAACAACTTGTGTGGATTTTGA
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
* * *
358983 AAAGGTTGTCACTAACTCG-GGTAGGCTTTTGA
1 AAAGGTTGCCACCAACTCGTGG--GGATTTTGA
** ** * *
359015 AAAGGTTGCCACCAACTATTATAGAATTTTAA
1 AAAGGTTGCCACCAACTCGT-GGGGATTTTGA
* * * *
359047 AAAGGTTACCACTAACTCGTGTGGACTTTGA
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
* * * *
359078 AATGGTTACCACCAATTCGTGTGAGCTTTTAGGCTTTTGA
1 AAAGGTTGCCACCAACTC--GTG-G------GGATTTTGA
* *
359118 AAAGGTTGCCACCAACTCTTGTGGACTTTTG-
1 AAAGGTTGCCACCAACTCGTGGGGA-TTTTGA
* * * ** *
359149 AAAGGTTGCCATCAATTCCTATGGACTTTGA
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
**
359180 AATA-GTTGCCACCAACTCGTGTAGAGTTTTGA
1 AA-AGGTTGCCACCAACTCGTGGGGA-TTTTGA
* * *
359212 AAAAGTTGCTACCAACTCGTGTGGGTTTTTGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* * *
359244 AAAGGTTGCCACTAACTCGTGTGGACTTTTTA
1 AAAGGTTGCCACCAACTCGTGGGGA-TTTTGA
* *
359276 AAAGGTTGCCAACAACTCACGT-GGG-CTTTGA
1 AAAGGTTGCCACCAACT--CGTGGGGATTTTGA
* **
359307 AAAGATTGCCACCAACTCGTGTCGACTTTTGA
1 AAAGGTTGCCACCAACTCGTGGGGA-TTTTGA
* * * **
359339 AAAGGTTACCACAAACTCATGTGGGCCTTTGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* * *
359371 AAAAGTTGCTACCAACACGTGCGGGATTTTGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
*
359403 AAAGGTTACCACCAACTCGTGCGGGATTTTGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* ** * *
359435 AAAAGTTATCACCAACTCAAGT-GGGCTTTCGA
1 AAAGGTTGCCACCAACTC--GTGGGGATTTTGA
* * * * ** *
359467 AAAGATTGCTAACAACTTGTGCAGACTTTGA
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
*** ** *
359498 AAAGGTTATTACCAACTCGTGTAAGCTTTTGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* * ** *
359530 AAAGGTTACCACCAACTCTTGTAGACTTTTCA
1 AAAGGTTGCCACCAACTCGTGGGGA-TTTTGA
** * ** **
359562 AAATATTACCACCAACTCGTATGGACATTGA
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
**
359593 AATA-GTTGCTTCCAACTCTTGTGCGCTTTTGAGCA-TTTGA
1 AA-AGGTTGCCACCAACTC--GTG-G-----G-G-ATTTTGA
* * ***
359633 AAAGGTTGCCACAAACTCTTATAGACTTTTGA
1 AAAGGTTGCCACCAACTCGTGGGGA-TTTTGA
** * * *
359665 AAATATTGCCAACAACAT-GTGTGGACTTTGA
1 AAAGGTTGCCACCAAC-TCGTGGGGATTTTGA
* * *
359696 AAAGGTTGTCACCAACTCGTGTGAGCTTTTGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* * *
359728 AAAGGTTGCTACCAACTCATGTAGGATTTTGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* * *
359760 AAAGGTTGCCACCAACTTGTGTGAGCTTTTGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* * *
359792 AAAGGTTGCTACCAACTCATGTAGGATTTTGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* * *
359824 AAAGGTTGCCACCAACTCATGTGAGCTTTTGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* ** **
359856 AATGGTTGTGACCAACTC-TCGTAGACTTTTGA
1 AAAGGTTGCCACCAACTCGT-GGGGA-TTTTGA
* *** *
359888 AAATGTTGCCACCAACTCGTGCAAACTTTGA
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
* * * *
359919 AATGGTTGCCTCCAACTTGTATGGGCTTTTGGACCTTTGA
1 AAAGGTTGCCACCAACTCG--T-GG-----GGA-TTTTGA
* * *
359959 AAAGGTTGCCA-CAATCTCGTGTGAACTTTGA
1 AAAGGTTGCCACCAA-CTCGTGGGGATTTTGA
* * * * * **
359990 AAAGATTGACATCAACTCGTGTAGGCTTTAAA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* * * ** *
360022 AAAAGCTGCGACCAACTCGTGTTTGCTTTTGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* ** *
360054 AAAGGTTGCTACCAACTTATGTGGGCTTTTGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* * *
360086 AAATGTTGCCACCAACTCGTGTGGACTTTGA
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
**** * *
360117 CTTTGTTGCCACCAAC-CTGTGTGGACTTTGA
1 AAAGGTTGCCACCAACTC-GTGGGGATTTTGA
* * * * ***** * *
360148 TTATGG-TGCCGCCAACTTGCATAAACTTTAA
1 -AAAGGTTGCCACCAACTCGTGGGGATTTTGA
* * *
360179 AAAGGTTACCAGCAACTCGTGTGGGCTTTTGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
** * ** *
360211 AAATATT-ACACCCAACTCGTGTAGACTTTG-
1 AAAGGTTGCCA-CCAACTCGTGGGGATTTTGA
** * * * ** * * *
360241 ACTGTGGTGCCACAAACTCATTTGAACTTTGT
1 AAAG-GTTGCCACCAACTCGTGGGGATTTTGA
* * *
360273 AAAGGTTGCCACCAACACGTGTGGCTTTTGA
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
* * * * * *
360304 AAAAGCTGCCAACAACGT-GTTTGGG-CTTTAA
1 AAAGGTTGCCACCAAC-TCG-TGGGGATTTTGA
** * *
360335 AAATCTTGCCACCAACTCGTGTGGACTTTTGC
1 AAAGGTTGCCACCAACTCGTGGGGA-TTTTGA
* * ** * *
360367 AAAGGGTACCACCAACTCGTGTATGCTATTGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* * ** *
360399 AAAGATTACCACCAACTCGTGTGGGCCTTAGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
** * *
360431 AAAGGTTGTTACCAACTCATGTGAGATTTTGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* ** * **
360463 AATGG-TGTTACCAACTCGAGTAAGATTTT-A
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* * *
360493 AAAGGGTTGCCACCAACTTGTGTAGGCTTTTGA
1 AAA-GGTTGCCACCAACTCGTG-GGGATTTTGA
* * *
360526 AAAGGTTGCCAACAACTTGTGTGGATTTTGA
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
** * *
360557 AAAGGTTTTCACCAACCCGTGTGGGCTTTTGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* * ** * * **
360589 AAAAGTTTCCAATAACTTGTGTGGACATTGA
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
* * *
360620 AAAGGTTGTCACCAACAC-TGTGGGTTTTTGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* * * * *
360651 AAAGATTGCTACTAACTCATGTGCGATTTTGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* *
360683 AAAGGTTGCCACCAACTAGTGTGGGCTTTTGA
1 AAAGGTTGCCACCAACTCGTG-GGGATTTTGA
* ** ** *
360715 AAAGGTTGCCAACAACTTATGTTGACTTTGA
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
* ** * * * **
360746 AAATGTTGTTACTAGCTCGCAT-GGGCTTTCAA
1 AAAGGTTGCCACCAACTCG--TGGGGATTTTGA
**
360778 AAAGGTTGCCACCAACTC-TCGTAGACTTTTGA
1 AAAGGTTGCCACCAACTCGT-GGGGA-TTTTGA
* * * * * *
360810 AAAGGTTACCACAAAATCTTATGGGCTTTTGA
1 AAAGGTTGCCACCAACTCGT-GGGGATTTTGA
* * * * * *
360842 AAGGGTTGCCACTAACACATGTGGACTTTGA
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
* * * * *
360873 AAAGGTTGCCATCAACGCGTGTGGACTTTAA
1 AAAGGTTGCCACCAACTCGTGGGGATTTTGA
* *
360904 ATAAGGCT-CCTACCAACTCGTGTGGGCTTTTGA
1 A-AAGGTTGCC-ACCAACTCGTG-GGGATTTTGA
360937 AA
1 AA
360939 TAGTTCCTAT
Statistics
Matches: 4764, Mismatches: 1528, Indels: 641
0.69 0.22 0.09
Matches are distributed among these distances:
24 1 0.00
25 7 0.00
26 2 0.00
27 8 0.00
28 15 0.00
29 26 0.01
30 120 0.03
31 1767 0.37
32 2511 0.53
33 113 0.02
34 24 0.01
35 2 0.00
36 3 0.00
37 2 0.00
38 10 0.00
39 14 0.00
40 131 0.03
41 8 0.00
ACGTcount: A:0.28, C:0.19, G:0.22, T:0.31
Consensus pattern (31 bp):
AAAGGTTGCCACCAACTCGTGGGGATTTTGA
Found at i:354420 original size:63 final size:63
Alignment explanation
Indices: 354101--396762 Score: 13107
Period size: 63 Copynumber: 667.9 Consensus size: 63
354091 CTTTTGAGCT
* ** * * ** ** *
354101 TTTGAAAAGATTGCCAGTAACTCTTGTGGACTTTTG-AAAGACTGCCATTAACTCATGTGGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * ** * * * * **
354163 TTTGAAATGGTTGCCACAAATTCGTGTGGATTTTTGAATAGGTTACCTCCAACTTGTGTGGTTT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGG-AC
* * * * * * ** * * ** ** *
354227 TTTGAAAAGTTTACTACCAATTCATTTGGTTTTTTGAAATGGTTACCATTAACTTATGTGGGCC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * * * *
354291 TTCG-AAAGGTTGCTACCAACTCGTGT-GGATTTTAAAAAGGTTACCACGAACTCGTGCGGGAT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTG-TGGAC
* * *
354353 TTTGAAAAGGTTGCCACCAACACATGTGGGCTTTTGAAAAGGTTGCCAACAACTTC-TGTGGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAAC-TCGTGTGGAC
* * * * ***
354416 TTTGAAAAAGTTGTCACCAACTCGTGTGGGCTTTTGAAGAGGTTGCCACCAACTCTTACAGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * *
354479 TTTTGAAAAGGTAT-CCACCTACTTATGTGGGCTTTTGGGCTTTTGAAAAGGTTGACACCAACTC
1 -TTTGAAAAGGT-TGCCACCAAC-T-CGT--G----TGGGCTTTTGAAAAGGTTGCCACCAACTC
* *
354543 TTATGGAC
56 GTGTGGAC
* * ** * * * * * * *
354551 TTTTGAATA-GTTGCTATTAACTCATGTGGAC-TTTGAAATGGTTACCACCAATTCATGTGGATT
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-C
** * * *
354614 TTTGAAAAGGTTGCCACCAACTCGTGTGGATTTTTGAAAAGGTTGCCACCAACTCCTATGGGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * *
354677 TTTTAAAAAGGTTGCCAACAACTCATTTGGGC-TTTCAAAAGGTTGCCACCAACTCGTGTGGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * *
354740 ATTTGTAAAGCTTACCACCAACTCGTGGGGGATTTTG-AAAGGTTGCCAGCAACTCGTATGGGAT
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * * *
354804 TTTGAAAATGTTGCTAGCAACTCGTGTGGGCTTTTGAAAAGGTTGCCAACAGCTTGAGTGGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * *
354867 TTTGAAATGGTTGTCACCAACTCGTGTGAGATTTTGAAAAGTTTGCCACCAACGCATGTAGGA-
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * * *
354930 TTTCGAAAATGTTACCACCAATTTGTGTGGGCTTTTGAAAAAGTTGCCAACAACTTGTGTGGAC
1 TTT-GAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * ** * * * * * *
354994 TTCGAAAAGGTTGCTAATAACTCTTGTAGACTTTTGAAAAAGTTTCCACCAACTCGTGTAGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* *
355057 TTT-AAAATGGTTGCCACCAACTCGTGTGGGCATTTGAGCTTTTGAAAAGGTTACCACCAACTCT
1 TTTGAAAA-GGTTGCCACCAACTCGTGT--G-----G-GCTTTTGAAAAGGTTGCCACCAACTCG
*
355121 TTTAGG-C
57 TGT-GGAC
* * * *
355128 TTTTG-AAAGGTTGCCATCAACTCGTGTGGAC-TTTGAAATGGTTGCCACCAACTAGTGTGGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * * *
355190 ATTGAAAGGGTTGCCACCAATTAGTTTGTGCTTTTAAAAAGGTTGCCAGCAGCTCGTGTGGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * *** * *
355253 TTTGAAAAGTTTGCCACTAACTCATAG-GGGC-TTTGAAAAAGTTACCTTTAACTTGTGTGGAA
1 TTTGAAAAGGTTGCCACCAACTCGT-GTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * ** * * ** * *
355315 TTTGAAAAGGTTGCTATCAACTTATGTGGCCTTTTAAAAAGGCAGCCAACAACTCGTGTGGGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * *
355378 TTTTG-AAAGATTGCCACCAACTCATGTGGAC-TTTGAAAAGGTTGCCACTAACTCGTATGGGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * *
355440 TTTGAAAAGGTTACCACCAACTCCTATGGAC-TTTGAAAAGGTTGCTATCAACTCGTGTAGG-T
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* *** * * *
355502 TTTTAAAAGGGCAACCACCAACTCGTATGGGCTTTTGAAAAGGTTTCCACCAACTCATGTAGG-C
1 TTTGAAAA-GGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
*** * ** * * * * *
355566 TTTCGAAAATAATACCACCAAGGCGTGTGGAC-TTTGACTATAGG--GCCACCAACTTGTATAGA
1 TTT-GAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGA--AAAGGTTGCCACCAACTCGTGTGGA
355628 C
63 C
** ** * * * *
355629 TTTGAAAATATTGCCACCTGCTCGTATGAGCATTTGAAAAGGTTAG-CACCAACTCGTGTGAAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTT-GCCACCAACTCGTGTGGAC
* * * * * * **
355692 TTTGAAATGGTTGCCTCCAACTAGTGTAGACTTTTGAAATGGTTGCCACCAACTCGTGTATAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * *
355755 TTTAAAAATGTTGCTACCAACTCGTGTTGGC-TATAAAAAGGTTGCCACCAACTCGTGCGGAT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * *
355817 TTTGAAAAGGTTGCCATCAACTCGTGTAGGCTTTTAAAAAGGCTGCCATCAACTCATGTAGG-C
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * * * ** *
355880 TTTTAAAAAAGTTGCCATCAACTAGTGTGGAC-TTTGAAAAAGTTGCCCCCAACGAGTATGGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * ** * * * * * *
355943 TTTTGAAAAGATTACCATAAACTTGTGTGGAC-ATTGACAAGGTTGCCACTAACTCGTGTGGGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * *
356006 TTTGAAAAAGTTACCACCAACTCGTGTAGAC-TTTGAAAAGGTTGCCATCAAGTCATGTGGGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * ** * *
356068 ATTTAAAAAGGCTGCCACCAACTCGTGTGGGCTTTTAAAAAAGTTACCACCATTTCGTGAGGGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* ** * * * * * **
356132 TTTTAAAAATTTTGCC-CTCAACTTGTGTGGAC-TTTGAATATGG-TGCCACCAACTTGTATATA
1 -TTTGAAAAGGTTGCCAC-CAACTCGTGTGGGCTTTTGAA-AAGGTTGCCACCAACTCGTGTGGA
356194 C
63 C
* ** ** * * *
356195 TTTGAAAAGGTTACCACCAACTTATGAAGGCTTCTGGAAAA-GTTGCCACCTACTCGTATGGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTT-TTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * *
356258 TTTGACTATAGG--GCAATCAACTCGTGTAGAC-TTTGAAAAGGTTGCCACCAACTTGTGTAGAC
1 TTTGA--AAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * *
356320 TTCGAAAAGTTTACCACCAACTCTTATAGG-TTATTGAAAAGGTTGCCACCAACTCATGTGGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTT-TTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * ** * * * *
356383 TTTAAAAAAGTTTCCACCAATTCGGGTAAGCTTTTGAAAAGGTTACCACCAACTTGTGTAGCC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * ** * * *
356446 TTCTGAAAAGGTTACCACCAACTCATGTGGAC-TATGACTATGTTGCC-CCAAACTTGTGTGAAC
1 TT-TGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACC-AACTCGTGTGGAC
* *
356509 TTTGAAAAGGTTGCCACCAACTCGTGTGAGTTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * *
356572 TTTTTAAACGGTTGCCAACAAATC-TCGTGGGC-TTTGAAAAGGTTGCCACCAACTCGTGTGGGC
1 -TTTGAAAAGGTTGCCACCAACTCGT-GTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * ** * * * * *
356635 TTTTAAAAAGGTTACCACAAACTCATGTAAGCCTTTGAAATGGTTGCTACCAACACGTGTGGAAT
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGG-AC
* * * *** * * * * *
356700 TTTAAAAAGGTTACCACCAACTCGTGCGAAATTTTGAAAAAGTTGTCACTAACTTGTGTGGGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * *
356763 TTTTGAAAAGGTTACCACCAACTCTTGTAGACTTTTCAAAAGGTTGCCACCAACTCGTGTGGA-
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
** * * *
356826 TATTGAAATA-GTTGCTTCCAACTCGTTTGGGCTTTTGAAAAGGTTGCCACCAACTCCTGTAGAC
1 T-TTGAAA-AGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* *** * * * * *
356890 TTTTG-AAAGGTTTCTGTCAACTCGTGTAGAC-TTTGAAATGGTTGCCAGCAACTCGTGTGGGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * *
356952 TTTTGAAAAGGTTACCACCAACAT-ATGTAGGCTTTTGAAAAGGTTACTACCAACTCATGTAGAC
1 -TTTGAAAAGGTTGCCACCAAC-TCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* ** * * *
357016 TTT-AACTATA-G-TGCCACAAACTCGTGTGAAC-TTTGAAAAGGTTACCACCAACTCGCGTGGG
1 TTTGAA--A-AGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA
357077 C
63 C
* * * * *
357078 TTTTAAAATGGTTACCACCAACTCGTGTGGGATTTTGTAAAA-GTTACCATCAACTCGTGT-GAG
1 TTTGAAAA-GGTTGCCACCAACTCGTGTGGGCTTTTG-AAAAGGTTGCCACCAACTCGTGTGGA-
357141 C
63 C
* * * * * *
357142 TTTTAAAAATGTTGCCAACAACTCGTGTAGG-ATTTGAAAAGGTTGCCACCAACTCGTGTGAAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * ** **
357205 TTTTGAAAATGTTGCCAACAACTTGTGTGGAC-TTTGAAAAGGTTGTTACCAACTTATGT-GAGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-C
* * * * * * *
357268 TTTGGAAAATGTTGCTACCAACTCATATGGGATTTTGAAAAGGTTGTCACCAACTTGTGT-GAGC
1 TTT-GAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-C
* * ** * * *
357332 TTTTGAAAAGGTTGCCAACAATTTATGTGGAC-TTTGAAAAGGTTGTCACCAACTCGTGTGGGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * ** ***
357395 TTTTGAAAAGGTTGCCACCAACACTTGTAGACTTTTGAAAATGTTATCACCAACTCGTGCAAAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * *
357459 TATGAAATGGTTGCCTCCAACTTCTGTGGGCTTTTGGACTTTTGAAAAGGTTGCCACCATCTCAT
1 TTTGAAAAGGTTGCCACCAAC-TC-GT--G----TGGGCTTTTGAAAAGGTTGCCACCAACTCGT
357524 GTGGAC
58 GTGGAC
* * * * * * * * * * * *
357530 TTTGAAAAGGTTGACAGCAACTCATATGGTCTTTTAAAAAAGCTGCGACCAATTCGTTTTTG-C
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCG-TGTGGAC
* * * * *
357593 ATTTGTAAAGATTGCTACCAACTCATGTGGGCTTTTGAAAATGTTGCCACCAACTCGTGTGGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
**** ** * * * * * *
357657 TTTGACTTTGTTGCCACCAACTCGTGTGTAC-TTTGACTATGG-TGCCACTAACTTGTATAGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGA-AAAGGTTGCCACCAACTCGTGTGGAC
* * * * ** ** *
357719 TTTAAAAAAGTTTCCAGCAACTCGTGTCAGCTTTTGAAAATATT-ACACCCAACTCGTGTGGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCA-CCAACTCGTGTGGAC
* * ** *** * * *
357782 TTTGACTATGG-TGCCATAAACTCGTGTAAAC-TTTGTAAAGGTTGCCACCAACTCCTGTGGGC
1 TTTGA-AAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
** * * ** * * *
357844 TTTTGAAAAGGTTGCCAAAAACTTGTTTGGGC-TTTGAAAATCTTGCCACCAATTCATGTGGATT
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-C
* * * * * *
357908 TTTGTAAAGGGTGCCAACAACTCGTGTGTGCTTTTGAAAAGGTTACCACCAACTCGTGTCGACC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-C
* ** * *
357972 TTGGAAAAGGTTGTTACCAACTCGTGTGGGATTTTGAAATAGTGTT---ACCAACTCGAGTGGGA
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAA-AG-GTTGCCACCAACTCGTGT-GGA
358034 C
63 C
* * * * *
358035 TTT-AAAAGGGTTGCCACTAACTCGTTTGGGCTTTTGAAAAGGTTGCCAACAACTTGTGTGGAT
1 TTTGAAAA-GGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
** * * * * * * *
358098 TTTGAAAAGGTTGTTACCAACCCGTCTGGGCATTTGAAAAAGTTTCCAACAACTTGTGTGGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
** * ** * * * * *
358161 TTTGAAAAGGTTATCACCAACAC-TGTATGTTTTTTAAAAGATTGCCACCAACTCATGTGCGAT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTG-GAC
* * * ** *
358224 TTTGAAAAGGTTTCCACCAACTCGTGTGGGCTTTTGAAAATGTTGCCAACAACTTATGTTGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* *** * * * * **
358287 TTCGAAAAGGTTATTACTAACTCGCGTAGACTTTTGAAAAGGTTGCCACCAACTC-TCGCAGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGT-GTGGAC
* *
358350 TTTTGAAAAGGTTACCACCAATTCGTATGAATTTTTGGGCTTTTGAAAAGGTTGCCACCAACAT-
1 -TTTGAAAAGGTTGCCACCAACTCG--TG------TGGGCTTTTGAAAAGGTTGCCACCAAC-TC
358414 GTGTGGAC
56 GTGTGGAC
* * * * * * *
358422 TTTGAAAAGGTTGCGATCAA-TGCGTGTGGGC-TTTAAATAAGGCTGCTACCAACTCGCGTGGGC
1 TTTGAAAAGGTTGCCACCAACT-CGTGTGGGCTTTTGAA-AAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * * * *
358485 TTTTGAAATGGTTCCCATCAACTCATGTAGGCATTTGAAAATGTTACCACGATCTCGTGTGGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * ** * * * * **
358549 TTTGACTATGG-TGCCACCAACTTTTATAGAC-TTTGAAAAAGTTGCCACCAACTAATGT-GAGC
1 TTTGA-AAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-C
* * **** * * * * * * **
358611 TTCTGAAAATGTTAGACTTTGACT-ATG-GTGC---TAAAAACTCGTGTG-AACTTTGAA-AAG-
1 TT-TGAAAAGGTT-GCCACCAACTCGTGTGGGCTTTTGAAAA--GGT-TGCCAC---CAACTCGT
*
358668 GT-TAC
58 GTGGAC
**** * * * **** * * ** * * *** *
358673 CACCAACTCATGTGGACTTTTAAAATAGT-TGCCACCAACTTATGTAGATTTTTG--A--AAAT-
1 TTTGAA--AAGGTTG-C-CACCAACTCGTGTG-----GGCTTTTG-AAAAGGTTGCCACCAACTC
*
358732 AT-T--AC
56 GTGTGGAC
**** ** * *** *** ** ** ** ** * *
358737 CACCAACTCGTGTGGGCCTTTGAAAAGGTTGCTAGCAACTCATG--TGGGCTT-TTA-AAAAT-G
1 TTTGAA-AAG-GT-TGCC-ACCAACTCG-TG-T-G-GGCTTTTGAAAAGG-TTGCCACCAACTCG
*
358797 T-TGCCAC
57 TGTG-GAC
* * **** *** ****** * * * ***
358804 --T---AA------C-TC-A-T-GTATATTTTTAAAAATATTACCACCAAC-TCGT-GTGAGCCT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAA-AAGGTTGCCACCAAC-TCGTGTGGAC
** * * * * * * * ** ** * * ** * * **
358852 TTGAAAAGGTTGCTACTAAC-TCGT-GT-AGGATTTTGAAAAGGTTCCCAC-CAACTCGAGTG-G
1 TTTGAAAAG--GTTGCCACCAAC-TCGTGTGGGCTTTTGAAAAGGTTGC-CACCA-ACTCGTGTG
*
358912 GAT
61 GAC
* * * * *
358915 TTTGAAAAGGTTACCACCAACTCGTGTGGGCTTGTGAAAAGGTTGCCAACAACTTGTGTGGAT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * ** * * *
358978 TTTGAAAAGGTTGTCACTAACTCGGGTAGGCTTTTGAAAAGGTTGCCACCAACTATTATAGAAT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * * *
359042 TTTAAAAAGGTTACCACTAACTCGTGTGGAC-TTTGAAATGGTTACCACCAATTCGTGTGAGCTT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTG-G---
359106 TTAGGC
62 --A--C
* * * * * *
359112 TTTTGAAAAGGTTGCCACCAACTCTTGTGGACTTTTG-AAAGGTTGCCATCAATTCCTATGGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * *
359175 TTTGAAATA-GTTGCCACCAACTCGTGTAGAG-TTTTGAAAAAGTTGCTACCAACTCGTGTGGGT
1 TTTGAAA-AGGTTGCCACCAACTCGTGT-GGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGA
*
359238 T
63 C
* * * * ** *
359239 TTTGAAAAGGTTGCCACTAACTCGTGTGGACTTTTTAAAAGGTTGCCAACAACTCACGTGGGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * *
359302 TTTGAAAAGATTGCCACCAACTCGTGTCGACTTTTGAAAAGGTTACCACAAACTCATGTGGGCC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * * * *
359366 TTTGAAAAAGTTGCTACCAACACGTGCGGGATTTTGAAAAGGTTACCACCAACTCGTGCGGGAT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTG-TGGAC
* ** ** * * * * * **
359430 TTTGAAAAAGTTATCACCAACTCAAGTGGGCTTTCGAAAAGATTGCTAACAACTTGTGCAGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
*** ** * * *
359493 TTTGAAAAGGTTATTACCAACTCGTGTAAGCTTTTGAAAAGGTTACCACCAACTCTTGTAGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* ** * * * * **
359556 TTTTCAAAATATTACCACCAACTCGTATGGAC-ATTGAAATA-GTTGCTTCCAACTCTTGTGCGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAA-AGGTTGCCACCAACTC--GT--G-
*
359619 TTTTGAGC
59 --TGGA-C
* * * * * ** *
359627 ATTTGAAAAGGTTGCCACAAACTCTTATAGACTTTTGAAAATATTGCCAACAACAT-GTGTGGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAAC-TCGTGTGGAC
* * * * *
359691 TTTGAAAAGGTTGTCACCAACTCGTGTGAGCTTTTGAAAAGGTTGCTACCAACTCATGTAGGAT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * *
359755 TTTGAAAAGGTTGCCACCAACTTGTGTGAGCTTTTGAAAAGGTTGCTACCAACTCATGTAGGAT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * ** *
359819 TTTGAAAAGGTTGCCACCAACTCATGTGAGCTTTTGAAATGGTTGTGACCAACTC-TCGTAGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGT-GTGGAC
* **** * * *
359882 TTTTGAAAATGTTGCCACCAACTCGTGCAAAC-TTTGAAATGGTTGCCTCCAACTTGTATGGGCT
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCG--T--G--
359946 TTTGGACC
59 --TGGA-C
** * * *
359954 TTTGAAAAGGTTGCCA-CAATCTCGTGTGAAC-TTTGAAAAGATTGACATCAACTCGTGTAGG-C
1 TTTGAAAAGGTTGCCACCAA-CTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * ** * ** *
360016 TTTAAAAAAAGCTGCGACCAACTCGTGTTTGCTTTTGAAAAGGTTGCTACCAACTTATGTGGGC
1 TTT-GAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * ****
360080 TTTTGAAAATGTTGCCACCAACTCGTGTGGAC-TTTGACTTTGTTGCCACCAAC-CTGTGTGGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTC-GTGTGGAC
* * * * ** *** * * * *
360143 TTTGATTATGG-TGCCGCCAACTTGCATAAAC-TTTAAAAAGGTTACCAGCAACTCGTGTGGGC
1 TTTGA-AAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
** * * * ** * * * * *
360205 TTTTGAAAATATT-ACACCCAACTCGTGTAGAC-TTTG-ACTGTGGTGCCACAAACTCATTTGAA
1 -TTTGAAAAGGTTGCCA-CCAACTCGTGTGGGCTTTTGAAAAG-GTTGCCACCAACTCGTGTGGA
360267 C
63 C
* * * * * * *
360268 TTTGTAAAGGTTGCCACCAACACGTGT-GGCTTTTGAAAAAGCTGCCAACAACGT-GTTTGGGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAAC-TCGTGTGGAC
* ** * * * * *
360330 TTTAAAAATCTTGCCACCAACTCGTGTGGACTTTTGCAAAGGGTACCACCAACTCGTGTATG-C
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * ** * *
360393 TATTGAAAAGATTACCACCAACTCGTGTGGGCCTTAGAAAAGGTTGTTACCAACTCATGTGAGAT
1 T-TTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTG-GAC
* ** * ** * *
360458 TTTGAAATGG-TGTTACCAACTCGAGTAAGATTTT-AAAAGGGTTGCCACCAACTTGTGTAGG-C
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAA-GGTTGCCACCAACTCGTGT-GGAC
* * * ** * *
360520 TTTTGAAAAGGTTGCCAACAACTTGTGT-GGATTTTGAAAAGGTTTTCACCAACCCGTGTGGGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * ** * * * * * **
360583 TTTTGAAAAAGTTTCCAATAACTTGTGTGGAC-ATTGAAAAGGTTGTCACCAACAC-TGTGGGTT
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * * * *
360646 TTTGAAAAGATTGCTACTAACTCATGTGCGATTTTGAAAAGGTTGCCACCAACTAGTGTGGGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* ** * * * ** * * ** *
360709 TTTTGAAAAGGTTGCCAACAACTTATGTTGAC-TTTGAAAATGTTGTTACTAGCTCGCATGGGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * * *
360772 TTTCAAAAAGGTTGCCACCAACTC-TCGTAGACTTTTGAAAAGGTTACCACAAAATCTTATGGGC
1 TTT-GAAAAGGTTGCCACCAACTCGT-GTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * *
360836 TTTTGAAAGGGTTGCCACTAACACATGTGGAC-TTTGAAAAGGTTGCCATCAACGCGTGTGGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * ** *
360899 TTTAAATAAGGCT-CCTACCAACTCGTGTGGGCTTTTGAAATA-GTT-CCTATTAACTCATGTGG
1 TTTGAA-AAGGTTGCC-ACCAACTCGTGTGGGCTTTTGAAA-AGGTTGCC-ACCAACTCGTGTGG
*
360961 GC
62 AC
* * * * * * * ** * *
360963 TTTTAAAAATGTTGCCACTAACTCGCGTGGAC-TTTGACTATGG-TGCCACCAACTTTTATAGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGA-AAAGGTTGCCACCAACTCGTGTGGAC
* * * ** * * * *
361026 TTTGAAATGGTTACCACCAACTAGTGTGACCTTTTGAAAATGTTG-GACTCTGACT-ATGGTGCC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCAC-C-AACTCGT-GTG--
*
361089 ACAAAC
61 ---GAC
* * * * *
361095 TCCTGTGAACTTTGAAAAGGTTACCACCAACTCATGTGGGCATTTAAAAAGGTTGCCACAAACTC
1 T--T-T-------GAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTC
* * *
361160 GTGCGAATT
56 GTGTGGA-C
* * * * * * * *
361169 TTTGAAAATGTTACCACCAACTCGTATAGGCCTTTGAAAAGGTTGCTACCAACTCGTATAGGAT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * ** *
361233 TTTGAAAAGGTTACCCCCAACTCGTGTGGGTTTTTAAAAAGGTTATCACCAACTCGTGTGGGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * ** * * * * **
361296 TTTTTAAAAGATTGCTAACAACTCGCATGGAC-TTTGAAAAGATTACCACCAACTTGTGCAGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * *
361359 TTTTG--AAGGTTACCACAAACTCGTGTAGGCCTTTGAAAAGGTAGCTACCAA-TACGTGTGGGA
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACT-CGTGT-GGA
*
361421 T
63 C
* * * * * *
361422 TTTGAAAAGGTTACCACCAACTCGTGCGGGATTTTGACAAA-GTTGTCACCAACTCATGTGGGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGA-AAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * ** *
361485 TTTTCAAACGGTTGCCAACAACTTGTGTAGAC-TTTGAAAAGGTTGTTACCAACTCGTGTGGCC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * ** * *
361548 TTTGAAAAGGGTTACCACCAACTCTTGTAGACTTTTCAAAAGGTTGCTGCCAACTCATGTGCA-
1 TTTGAAAA-GGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* **
361611 TATTGAAATA-GTTACTTCCAACTCTTGTGGGCTTTTGGGCTTTTGAAAAGGTTGCCACCAACTC
1 T-TTGAAA-AGGTTGCCACCAACTC--GT--G----TGGGCTTTTGAAAAGGTTGCCACCAACTC
* *
361675 TTGTAGAC
56 GTGTGGAC
* * * * *
361683 TTTTG-AAAGGTTGCCATCAA--------GACTTTTGAAATGGTTGCCACTAACTCGTGTGGGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * *** *
361738 TTTTGAAATGGTTACCACCAACACGCGTAGGCTTTTGGAAAGATTATTACCAACTCGTGTAGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * ** ** * * * *
361802 TTTGACTATGG-TACCATAAACTCGTGTGAAC-TTTGAAAAGGTTACCACCAACTCATATGGGC
1 TTTGA-AAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * *
361864 TTTTAAAAAGGTTACCACCAACTCGTGTGGGTTTTTGTAAAA-GTTACCACCAACTCATG-AGAG
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTG-AAAAGGTTGCCACCAACTCGTGTGGA-
361927 C
63 C
* * * * *
361928 TTTTAAAAAGGTTGCTAACAACTTGTGTAGGC-TTTGAAAAGGTTGCCACCAACTCGTGTGGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * *
361991 TTTTGAAAATGTTGCCAACAACTTGTGTGGAC-TTTGAAAAGGTTGTCACCAACTCGTGT-GAGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-C
* * * * * * *
362054 TTTCAAAAAGGTTGCTACTAACTCATGTGGGATTTTGAAAGGGTTGCCACCAACT-TTGT-GAGC
1 TTT-GAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-C
** * * * *
362117 TTTTGAAAAGGTTGCCAATAACT--TAGTGGAG--TTTGAAAAAGTTGTCA-CAACTCGTTTGGG
1 -TTTGAAAAGGTTGCCACCAACTCGT-GTGG-GCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA
362177 C
63 C
* * ** * * * ***
362178 TTTTGAAAAGGTTGCGAGCAACTC-TCGCAGACTTTTGAACATGTTGCCACCAACTCGTGCAAAC
1 -TTTGAAAAGGTTGCCACCAACTCGT-GTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * *
362242 TTTGAAATGGTTGCCTCCAACTTGTGTGGGCTTTTGGACCTTTGAAAAAGTTACCACCATCTCGT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGC---T-----TTTGAAAAGGTTGCCACCAACTCGT
*
362307 GTGGGC
58 GTGGAC
* * * ** * * * *
362313 TTTGAAAAGATTGACATCAACTCGTGTGGGCTTTAAAAAAAGATGCGACCAACTCGTGTTTG-C
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTG-TGGAC
* ** * * *
362376 TTTTGAAAAGGTTGCTACCAACTTATATGGGCTTTTGAAAATGTTACCACCAACTCGTGTGGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
**** ** * * * * * * *
362440 TTTGACTTTGTTGCCACCAACTCGTGTGTAC-TATGACTATGG-TGCCACTAACTTGTATAGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGA-AAAGGTTGCCACCAACTCGTGTGGAC
* * * * ** *
362502 TTTAAAAAGGTTACCAACAACTCGTGTCGGCTTTTGAAAATATT-ACACCCAACTCGTGTGGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCA-CCAACTCGTGTGGAC
* * ** ** *
362565 TTTGACTATGG-TGCCATAAACTCGTGTGAAC-TTTGTAAAGGTTGCCACCAACTCGTGTGGAC
1 TTTGA-AAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * ** *
362627 TTTTGAAAAAGCTGCCAACAACGT-GTTTGGGC-TTTAAAAATCTTACCACCAACTCGTGTGGAC
1 -TTTGAAAAGGTTGCCACCAAC-TCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * ** * * * *
362690 TTTTGCAAAGGGTACCACCAACTTGTGTATGCTATTGAAAAGATTACCACCAACTCGTGTGGGCC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* ** * * * * ** *
362755 TTAGAAAAGGTTGTTACCAACTCATGTGAGATTTTGAAATGG-TGTTACCAACTCGAGTGGGA-
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * * *
362817 TTTTAAAAGGGTTGCCACCAACTTGTGTAGGCTTTTGAAAAGGTTGCCAACACCTTGTGTGGAT
1 TTTGAAAA-GGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
** * * * ** *
362881 TTTGAAAAGGTTTTCACCAACCCGTGTGGGCTTTTGAAAAAGTTTCCAATAACTTGTGTGGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * *
362944 TTTGAAAAGGTTGTCACCAACAC-TGTGGGTTTTTGAAAAGATTGCTACTAACTCATGTGTGAT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTG-GAC
* * ** *
363007 TTTGAAAAGGTTGCCACCAACTAGTGTGGGCTTTTGAAAAGGTTGCCAACAACTAATGTTGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* ** * * *** * *
363070 TTTGAAAATGTTGTTACTAGCTCACATGCGCTTTTGAAAAGGTTGCCACCAACTC-TCGTAGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGT-GTGGAC
* * * * * ***** **** ** * *
363133 TTTTGAAAAGGTTACCACGAAATCTTATGGGCTTTTG-GGCTTTTGGGCTTTTAA-AAGGGTGCC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTT--GCCACCAACTCGTGTG-G
363196 AC
62 AC
* * **** ** * ** * * * * * *
363198 --T-AACACATGTGGACTTTGAA-AAG-GT-TGC-CAT-CAATGCGTGTG-GACTTTAAATAAG-
1 TTTGAA-A-AGGTTG-CCACCAACTCGTGTGGGCTTTTGAAAAG-GT-TGCCAC--CAACT-CGT
363253 GCT-G-C
58 G-TGGAC
*** ** * **** * * * * * * * * **** *
363258 TACCAACTCGTGTGGGCTTTTGAAATAG-GT---CCTATCAACTCATGTGGGCTTTTGAAAAT-G
1 TTTGAA-AAG-GT-TGC-CACCAACTCGTGTGGGCTTTTGAA--AAGGT-TGC--CACCAACTCG
*
363318 T-TGCCAC
57 TGTG-GAC
*** * ** * ** * ** **
363325 --T-AACTCGTGTG-GACTTTGACT-ATGGTGCCACCAACTTTT-ATAGACTTTG--A--AA-AG
1 TTTGAAAAGGT-TGCCAC--CAACTCGT-GTG-----GGCTTTTGA-AAAGGTTGCCACCAACTC
*
363379 GT-TGCCAC
56 GTGTG-GAC
* * * * *** ** ** * * * *** ** * *
363387 ---CAATTA-GTGTGACCTTCTGAAAAGGT-TGCTACCAACTCGTATAAGATTTTGAAAAAGTTG
1 TTTGAA-AAGGT-TG-CC-AC-CAACTCGTGTG--GGC-TTTTG-AAAAGGTTGCCACCAACTCG
*****
363447 CCACCAAC
57 -TGTGGAC
* ** *** * ** **** ** * **** **
363455 TCGTG--TGGGTTTTTGA--AA--AG-GT-TAC-CACCAACTCGTGTGGGCTTTTTAA-AAG-GT
1 T-TTGAAAAGG-TTGCCACCAACTCGTGTGGGCTTTTGAA-AAG-GT-TGC-CACCAACTCGTGT
*
363509 TG-C
60 GGAC
* * **** * *** * *** * * ** ** ** ***
363512 --T-AACAA-CTCG-CATGGGCT-TTGAAAAGATTGCCACCAA-CTTG-TGCGGACTATTGAAAA
1 TTTGAA-AAGGTTGCCACCAACTCGTG-TGGGCTTTTGA-AAAGGTTGCCACCAACTCGTGTGGA
*
363569 G
63 C
* * *** *** * * * **
363570 GTT-ACCACAA-GTT-----C--GT-GTAG-GCCTTTGAAAAGGTA-GCTACCA-ATACGT-GTG
1 TTTGA--A-AAGGTTGCCACCAACTCGT-GTGGGCTTTTGAA--AAGGTTGCCACCAAC-TCGTG
* ***
363621 GGATT
59 TGGAC
** * * ** * * * ** *** *
363626 TTGAAAAGGTTACCAC-CAACTCGT-GCG-GGATTTTGACAAAGTTGT-CACTAACTC-A-T-GT
1 TTTGAAAAGGTTGC-CACCA-AC-TCGTGTGGGCTTTTGAAAAGGT-TGC-C--AC-CAACTCGT
**
363684 G-GGCT
58 GTGGAC
* * * * * * ** *
363689 TCTCAAAAGGTTTCC-CACAACTTGTGTAGAC-TTTGAAAAGGTTGTTACCAACTCGTGTGGCC
1 TTTGAAAAGGTTGCCAC-CAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * * *
363751 TTTGGAAAGGGTTACCACCAACTCTTGTAGGCTTTTTG-AAAGGTTGTCGCCAACTCATGTGCAT
1 TTT-GAAAAGGTTGCCACCAACTCGTGTGGGC-TTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* ** * * *
363815 TTTGAAATA-GTTACTTCCAACTTTTGTGGGCTTTTGGGCTTTTGAAAAGGTTGCCACTAACTCT
1 TTTGAAA-AGGTTGCCACCAAC--TCGT--G----TGGGCTTTTGAAAAGGTTGCCACCAACTCG
*
363879 TGTAGAC
57 TGTGGAC
* * * * *
363886 TTTTG-AAAGGTTGCCATCAA--------GACTTTTGAAATGGTTGCCACCAATTC-TGTGGGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * *** *
363940 TTTTGAAATGGTTACCACCAACACGTGTAGGCTTTTGGAAAGATTATTACCAACTCGTGTAGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * ** ** **
364004 TTTGACTATGG-TACCATAAACTCGTGTGAAC-TTTGAAAAGGTTGCCACCAACTCGTGTGGGTT
1 TTTGA-AAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * * * *
364067 TTTGTAAAA-GTTACCACCAACTCATGAGAGCTTTTAAAAAGGTTGCTAACAACTTGTGTAGG-C
1 TTTG-AAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * *
364130 TTTGAAAAGGTTGCCACCAACTCGTGTGGACTTTTGAAAATGTTGCCAACAACTTGTGTGGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * ** * * *
364193 TTTGAAAAGGTTGTCACCAACTCGTGTGAGCTTTCAAAAAGGTTGCTACCAACTCATGTGGGAT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * ** * *
364257 TTTGAAAGGGTTGCCACCAACT-TTGTGAGCTTTTGAAAAGGTTGCCAATAACT--TACTCGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGT-GTGGAC
* * * * *
364318 TTTGAAAAAGTTGTCACCAACTCGTTTGGGCTTTTGAAAAGGTTGCGACCAACTC-TCGTAGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGT-GTGGAC
* ** **** * * * *
364381 TTTTGAACATATTGCCACCAACTCGTGCAAAC-TTTGAAATGGTTACCTCCAACTTATGTGGGCT
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAAC-T-CGT--G--
364445 TTTGGACC
59 --TGGA-C
* * * * * *
364453 TTTGAAAAGGTTGCCACCATCTCGTGTGTGC-TTTGAAAAGATTGACATCAACTCGTGTGGGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
** * * ** ** * * *
364515 TTAAAAAAAAGCTGCGTCCAACTCGTGTCTGCTTTTGAAAAGGTTGCTACCAACTCATGTGGGC
1 TT-TGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * ****
364579 TTTGGAAAATGTTGCCGCCAACTTGTGTGGAC-TTTGACTTTGTTGCCACCAACTCGTGTGGAC
1 TTT-GAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
** * * * * * * * * *
364642 TTTG-ACCGTGGTGCCGCCAACTTGTATAGAC-TTTAAAAAGGTTACCAGCAACTCGTGTCGG-C
1 TTTGAAAAG-GTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
** * ** * * ** *
364704 TTTTGAAAATATT-ACACCCAACTCGTGT-GGAATTTGACTATGG-TGCCATAAACTCGTGTGAA
1 -TTTGAAAAGGTTGCCA-CCAACTCGTGTGGGCTTTTGA-AAAGGTTGCCACCAACTCGTGTGGA
364766 C
63 C
* * * * * *
364767 TTTGTAAAGGTTGCCAACAACTCTTGTGGGCTTTTGAAAAAGTTGCCAACAACGT-GTTTAGG-C
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAAC-TCGTGT-GGAC
** * * * * *
364830 TTTGAAAATCTTGTCACCAACTCGTGTGGACTTTTGCAAAGGGTGCCACCAACTCGTGTGGCCCC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGG--AC
** * * * ** *
364895 TTT-AAAAGGGTCACCACCAACTCGTGTGGGCCTTAGAAATGGTTGTTACCAACTCGTGTGGGAT
1 TTTGAAAA-GGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * **
364959 TTTGAAAAGGTAT--TACCAACTTGAGTGGGATTTT-AAAAGGGTTGCCACCAACTCAAGTAGG-
1 TTTGAAAAGGT-TGCCACCAACTCGTGTGGGCTTTTGAAAA-GGTTGCCACCAACTCGTGT-GGA
365020 C
63 C
* * * * * * * *
365021 TTTTGAAAAGGTTACCAACAACTTGTGT-GGATTTTGAAAACGTTGTCACCAACCCGTGTGGGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * *
365084 TTTTGAAAAAGTTTCCAACAACTTGTGTGGAC-TTTGAAAAGGTT-CTCACCAACAC-TGTGGGT
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGC-CACCAACTCGTGT-GGA
*
365146 T
63 C
* * * ** * * * * * *
365147 TTTGAAAAGATTGCTACCAACTCATGTATGATTTTGAAAAGGTTACCACCAAATCCTGGGGGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * ** * * **** * * * *
365210 TTTTGAAAAGATTGCTAGCAACTTATGTTGAC-TTTGAAAAGGTTTTTTCTAACTTGCGTGGGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * *** * * *
365273 TTTTGAAAATGTTGCCACCAACACGTATGGAC-TTTGAAAAGGTCATCATCAA-TGCATGTGGGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACT-CGTGTGGAC
* ** * * * * * *
365336 TTTAAATAAGACTGCTACCAACTCGTATGGGCTTTTGAAATGGTT-CTCATCAACTCATGTGGGC
1 TTTGAA-AAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGC-CACCAACTCGTGTGGAC
* * * * * * ** * *
365400 TTTTGAAAATGTTGCCACTAACTCATGTGGAC-TTTGACTATGG-TGCCACCAACTTTTATAGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGA-AAAGGTTGCCACCAACTCGTGTGGAC
** * * * * * **** *
365463 TTTGAAAAGGTTGCCACCAACTAATGCGAGCTTCTGAAAATGTTAGACTTTGACT-ATGGTGCCA
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTT-GCCACCAACTCGT-GTG---
*
365527 CAAAC
61 --GAC
* *
365532 TCGTGTGAACTTTGAAAAGGTTACCACCAACTCATGTGGGCTTTT-ATAAAGGTTGCCACCAACT
1 T--T-T-------GAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGA-AAAGGTTGCCACCAACT
*
365596 CGTGTGGATT
55 CGTGTGGA-C
* * * * * * *
365606 TTTGAAAATGTTACCACCAACTCGTTTGGGCCTTTGAAAAAGTTGCTACCAACTCGAGTAGGA-
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * ** * *
365669 TTTTAAAAGGTTGCCACCAACTCAG-GTGCGCTTTTGAAAAGGTTGCCAACAACTATTGTAGAAT
1 TTTGAAAAGGTTGCCACCAACTC-GTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * *
365733 TTTAAAAAGGTTGTCACTAACTCGTGTGGAC-TTTGAAATGGTTGCCACCAATTCGTGTGAGCTT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTG-G---
365797 TTAGGC
62 --A--C
* * * * * * *
365803 TTTTGAAAAGGTTGCCACCAACTCTTGTAGACTTTTG-AAAGGTTGGCATCAACTCTTATGGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * *
365866 TTTGAAATA-GTTACCACCAACTCATGTAGAG-TTTTGAAAAGGTTGCTACCAACTCGTGTGGGG
1 TTTGAAA-AGGTTGCCACCAACTCGTGT-GGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGA
*
365929 T
63 C
* * * * * * * ** *
365930 TTTGAAAAAGTTACCACCAACTCGTGTGGACTTTTTAAAAGGTTTCTAACAACTCGCATGGGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * *
365993 TTTGAAAAGGTTGCTAGCAACTTGTGTGGACTTTTGAATAGGTTACCACAAACTCGTGTAGGCC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * * * * *
366057 TTTGAAAAGGTTGCTACCAACACGTGTGGGATTTTCAAAAGGTTACCCCCAACTCATGCCGGAT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTG-TGGAC
* ** * **
366121 TTTGAAAAAGTTATCACCAACTCGTGT-GGCTTTTCAAAAGGTTGCCACCAACTCGTGTGGGTT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * * *
366184 TTTGTAAAA-GTTACCATCAACTCGTGTGAGCTTTTAAAAATGTTGCTAACAACTCGTGTAGG-C
1 TTTG-AAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * * *
366247 TTTGAAAAGGTTACCACCAACTCATGTGGACTTTTGAAAATGTTGCCAACAACTTGTGTGCAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * ** ** ** * *
366310 TTTGAAATGGTTGTCACCAACTAGTGTTAGCTTTTGAAAAGGTTGCTGCCAACTTATGCAGGAT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTG-TGGAC
* * * * * * ** *
366374 TTTGAAAAGGTTGTCATCAATTTGTGTGAGCTTTTGAAAAGGTTGCCAACAACTTATGTAGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * *
366437 TTTGAAAAAGTTGTCACCAACTCGTGTGGGCTTTTGAAAAGGTTACGACCAACTC-TCGTAGAGT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGT-GTGGA-C
* * **** * * * *
366501 TTTGAAAATGTTGCCACCAACTCATGCAAAC-TCTGAAATGGTTGCCTCCAACTTGTGTGGGCTT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAAC-T-CGT--G---
366565 TTGGAC
59 -TGGAC
** * * * * * * * *
366571 TTTTGAAAAGGTTGCCACCTTCTCATGTAGAC-TTTGAAAAAGTTGACATCAACTCATGTGGGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * **** * * ** *
366634 TTTAAAAAAAGCTGCGACCAACTCGTGCCTACTTTTGAAAAGTTTGCTACCAACTCAAGTGGGC
1 TTT-GAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* ** * * * * * * *
366698 TTTGGAAAATGTTATCGCCAACTCATGTGGACTTTTTAAAAGGTTGCCAACAACTCGCGTGGGC
1 TTT-GAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * *
366762 TTTGAAAAGGTTGCCACCAACTCGTATGGACTTTTGAAAAGGTTACCACAAACTCGTGTAGGCC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * * * * *
366826 TTCGAAAATGTAGCTACCAACACATGTGAGATTTTGAAAAGGTTGCCACCAACTCGTGCGAGA-
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTG-GAC
* * * * * ** * **
366889 TTTTAATAAAGTTGTCACCATCTCTTGTGGGCTTTTGAAAAGGTTGCCAATAACTTGTGCAGAC
1 TTTGAA-AAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
** * * *
366953 TTTGAAAAGGTTGTTACCAA--C--GTGGGCTTTTGAAAAGGTTACCACCAACTCTTGTAGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * ** ** *
367012 TTTTTAAAAGGTTGCCACCAACTCGCGTGGAC-AAT-AAAATTTTTGCCACCAATTCTTGTGACC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAA-GGTTGCCACCAA--CTCGTG---
*
367075 TTTTGGGC
59 ---TGGAC
* * * * ** *
367083 TTTTAAAATAGTTACCACCAACTCTTGTGGAATTTTG-AAAGGTTGCCATCAACTCGTGTGGAC
1 TTTGAAAA-GGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* ** * ** ** *
367146 TTTGAAATA-GTTCCCAATAACTTGTGTGGATTTTTGAAAAGGTTGCCACCAACTTATGTGGGC
1 TTTGAAA-AGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * ** * * * * *
367209 TTTGACTATGG-TGCCACAAACTCATGTGAAC-ATTGTAAAGGTTGCCCCCAACTCCTGTGGGC
1 TTTGA-AAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * ** * * * *
367271 TCTTGAAAAGATTGCCAACGACTCGTTTGGGC-TTTGAAAATGTTATCACAAATTCATATGGAC
1 T-TTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * * * * *
367334 TTTTGCAAAGGTTGCCACCAACTCTTATGGG-TTTTAAAAAGGTTACTACTAAGTCATGAAGGCC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTG-TGGAC
* * * * * * ** * * * *
367398 TTTGAAAAGCTTGCTACCAACTCGTGTTGGATTTTGGAACGGTTGCCATGAGCTGGAGTGAGAT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTG-GAC
* * * *** * * *
367462 TTTGAAAAAGTTACCACCAACTCGGGTCACCTTTTGAAAAGGTTGCTACCAACTTGTGCGGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * *** ** *
367525 TTTGAAAAGGTTGTCACCAA-TACGTGTGTG-TTTTAGAAAAAGTTTTTAATAACTTGTGTGGAC
1 TTTGAAAAGGTTGCCACCAACT-CGTGTGGGCTTTT-GAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * *
367588 TTTGAAAAAGTTGTCACCAACT-TTATGGGTTTTTGAAAAGGTTGCTACCAACTCGTGTGCGAT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTG-GAC
* ** * * *
367651 TTTGAAAAAGTTAACACCAACTCGTGTGGGCTTTTAAAAAGGTTGCCACTAACTCGTGTGGATT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-C
* * * * * * * *
367715 TTTTAAAATGTTACCACCAACTCGTGTGGGCCTTTGAAAAGGTTGCTACCAACTTGTATAGGAT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * * *
367779 TTTTAAAAAGTTGCCACTAACTCGTGT-GGCATTTTGAAAAGGTTACGACTAACTCATGTAGG-C
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGC-TTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * * * * *
367842 TTTTAAAAGGTTGCCAACAACTTGTGTAGAC-TTTGAAAAGGTTGTCACTAACTCGGGTGGGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
** * ** * ** * * * * * * *
367904 TTTTGAAAAGGTTGCTGCCAATTATTGTAGAATTTTAAAAAGGTTACTACTAACTTGTATGGTC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * *
367968 TTTGAAATGGTTGCCACCAATTCTTGTGGGCTTCTAGGCTTTTGAAAAGGATGCCACCAACTCTT
1 TTTGAAAAGGTTGCCACCAA--CTCGT--G----TGGGCTTTTGAAAAGGTTGCCACCAACTCGT
*
368033 ATGGAC
58 GTGGAC
** * * * ** * * *
368039 ATTTG-AAAGGTTGCCATTAACTCCTATGGAC-TTTGAAATTGTTGCCACCAACTCATGTAGAGT
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-C
* * * * * *
368102 TTTGAAAATGTTGCTACCAACTCGTGTGGGGTTTTGAAAATGTTGTCACCAACTCGTGTGGAAA
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGG-AC
* * * *
368166 TTTTAAAAGGTTGCCAACAACTCGCGTGGGC-TTTAAAAAGGTTGCCACCAACTCGTGTGGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * *
368228 TTTTGAAAAGGTTACCACCAACTCGTGTAGG-TCATTGAAAAGGTTGCTACCAACACGTGTGGGA
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCT-TTTGAAAAGGTTGCCACCAACTCGTGT-GGA
*
368292 T
63 C
* * * * * *
368293 TTTGAAAAGGTTACCCCCAACTCGTGTGAGATTTTGAAAAAGTTGTCACCAACTCGTGT-GAGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-C
* * ** ** * ** *
368356 TTTTTAAAAGGTTGCCAACAACTTTTGCAGAC-TTT-AAAATGGTTGTTACCAACTCGTGTGCAT
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAA-GGTTGCCACCAACTCGTGTGGA-
*
368419 T
63 C
* * * * * *
368420 TTTGAAAAGGTTACCACCAACTCTTGTAGACTTTTCAAAAGATTGCCACCAACTCGTGTGGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * **** * * * * *
368483 ATT-AAAATAGTTAATTCTAACTCTTATGGGCTTTTGAAAAGGTTG-CACCAACTCTTGTAGAC
1 TTTGAAAA-GGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * *
368545 TTTTG-AAAGGTTGCCATCAACTCGTGTGGAC-TTT-AAAATGGTTGCCACCAACTTGTGTGGGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAA-GGTTGCCACCAACTCGTGTGGAC
* * * * * * * **
368607 TTTTGAAAAGGTTACCACCAACACTTGTAGGCTTTTGAAAAAGTTACTACCAACT-GATGTAAAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCG-TGTGGAC
* * * * ** * * * * **
368671 TCTGACTATGG-TGCCACAAACTCGTGTGAAC-TTTGTAAAGGTTACCACTAACTCTTGTGGGTT
1 TTTGA-AAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * * *
368734 TTTAAAAAGGTTACCACCAATTCGTGTTGGTTTTTGTAAAA-GTTGCTACGAACTCGTGT-GAGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTG-AAAAGGTTGCCACCAACTCGTGTGGA-C
* * * * *
368797 TTTTAAAAAGGTTGCCAACAACTCGTGTAGGC-TTTGAAAAGGTTACCACTAACTCGTGTGGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * *
368860 TTTCAAAAATGTTGCCAACAACTTGTGTGGAC-TTTGAAAAGGTTGTCACCAACTCGTGT-GAGC
1 TTT-GAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-C
* * * * * *
368923 TTTTGAAAAGGTTGCTACTAACTCATGCGGGATTTTGAAAAGGTTGCCACCAACTTGTGT-GAGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-C
** ** * * * *
368987 TTTTGAAAAGGTTGCCAATAACTTATGTGGAC-TTTGAAAAGGTTGTCACCAACTCATGTGGGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * *
369050 TTTTGAAAATGTTGCGACCAACTC-TCGTAGACTTTTTAAAAGGTTGCCACCAACTCATGTGGGC
1 -TTTGAAAAGGTTGCCACCAACTCGT-GTGGGCTTTTGAAAAGGTTGCCACCAACTC--GT--G-
369114 TTTTGG-C
59 ---TGGAC
* * * * * ** * * *
369121 TTTTGAAAA-GTTGCTATCGACTCCTGTGGAC-TTTGAAATTGTTACCACCAACTCGTGAGGGCC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTG-TGGAC
* * * * * * **
369184 TTTAAAAAGGTTACCACCAACTCATGTGAGCTTTTGAAAATGTTGCTATTAACTCGTGTGGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * ** * * * * * * *
369247 ATTGGAAAGGTTGGCACCAACAAGTTTGGGTTTTTTAAAAGATTTCCACCAACTCATGTGAAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* ** * * **
369310 TTTGAAAAGGTTACCAATAACTCGTATGGGC-TTTGAAAAGGTTGCC-CTAACTTATGTAGG-C
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * * *
369371 TTTGAAAAGGATGTCC-CTAAGTCGTGTGGAC-TTTGAAAAGGTTGCCGCTAACTCGTGTGGGC
1 TTTGAAAAGGTTG-CCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * ** * * * * * ** *
369433 TTTCAAAAAGGCTGTCACCAACTTATGTGTGTTTTTTAAAAAGTCGCCATAAACTCGTGTGGGC
1 TTT-GAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * *
369497 TTTTGAAAATGTTGCCAACGACTCATGTGGGC-TTTGAAAAGGTTACCACCAACTCGTGTGGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * *
369560 TTTTGAAAAGGTTACCCCCAACTTGTGTGAGCTTTTGAACTA-GTTGCTACTAACTTGTGTGGGA
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAA-AAGGTTGCCACCAACTCGTGT-GGA
*
369624 T
63 C
* ** * * * *
369625 TTTGAAAAGGTTGCCTCCAACTTATGTGAGATTTTGAAAAGGTTGCCACCAACTCTTGTAGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * ** * * *
369688 TTTTGAAAAGGTTGCCACCAACTCGCGTGGAC-TTT-AAAATTTTTGCCCCCAATTTGTGT-GAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAA-GGTTGCCACCAACTCGTGTGGA-
369750 C
63 C
* ** * * *
369751 TTTTGGGCTTTTAAAATGGTTGTCACCAACTTTTGTGGACTTTTG-AGAGGTTGCCACTAACTCG
1 -TTT--G-----AAAA-GGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCG
*
369815 TGTGAAC
57 TGTGGAC
* ** ** * *
369822 TTTGAAATA-GTTACCAATAACTCGTGTGGATTTTTGAAAAGGTTGCCACCAACTCATATGGAC
1 TTTGAAA-AGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
** * * ** * * *
369885 TTTGACTA-TTGTGCCA-CAA--CGTGCGAAC-TTTGTAAAA-GTTGCCACCATCTCCTAT-GAG
1 TTTGAAAAGGT-TGCCACCAACTCGTGTGGGCTTTTG-AAAAGGTTGCCACCAACTCGTGTGGA-
369943 C
63 C
* * * * * * * **
369944 TTTTGAAAAGGTTGACAACAACTCGTTTCGGC-ATTGAAAATGTTACCACCAACTCGCATGGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * * * *
370007 TTTTACAATGCTTGCCTCCAACTCGTGTGGGCTTTTAAAAAAGTTACTACCAACTCGGGTGGGCC
1 TTTGA-AAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
*** * * * * * **
370072 TTTGAAAAGGTTATTACGAACTCGTGTGGGATTTTGAAAAGGTTACC-CCTAACTCCTATGGGGT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACC-AACTCGTGT-GGAC
* * * ** *
370136 TTTGAAAAGGTTGCCACTAACTCGTGTAGAC-TTTGAAAAGGTTGTAACCAACTCGTGTGGGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * ** * * *
370198 TTTTGAAAAAGTTTCCAACAACTTGTGTTGAC-TTTGAAAAAATTTGTCACCAACTC-TATGGGT
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTG-AAAAGGTTGCCACCAACTCGTGT-GGA
*
370261 T
63 C
* * * * * *
370262 TTTGAAAAGGTTGCTA-CAACTTGTTTGCGATTTTGAAAAGGTTGCCACTAACTCGTGTGCG-C
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTG-GAC
* * * * * * * * * * *
370324 TTTTGAAAAGGTTACCAACAACTTGTGTTGAC-TTTCAAAAGGTGGTCACTAACTCTTGTGGGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * *
370387 TTTTGAAAAGCTTGCCACCAACTCTTGTAGACTTTTGAAAAGGTTACCACCAACTCTTGTGGGCC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTC--GT--G--
370452 TTTCGG-C
59 --T-GGAC
** * * * *
370459 TTTTGAAAAGGTTGCCACCAACTCGTGTGCAC-ATTGAAAAGGTTGCCATCAACTTGTGT-GAGT
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-C
* * ** *** ** *
370522 TTTAAAAATGGCTAACACCAACTCGTGTGGGCTTTTGAAAAGGTTGCTTTCAACTTATATAGG-C
1 TTTGAAAA-GGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * * * * * ** * *
370586 TTTTGAAAATGTTGCCAGCAACTTGTTTGGAC-TTTGACTATGG-TGCTACCAATTTTTATAGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGA-AAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * *
370649 TTGGAAAAGGTTACCACCAACTCGTGTGAGCTTTTAAAAATGTTGGACTTTGACTATGA-TACAA
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTT-G-C---CACCA--ACT-C--
* ***
370713 ACTCGTGTGA
56 -GT-GTGGAC
* * * * * * * *
370723 ACTTTGAAAAGGTTGCCACCAACTCATGCGAGCTTTTAAAAAGTTTGCCA-CAGACTCGGGTTGA
1 T--TTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCA-ACTCGTGTGGA
*
370787 TT
63 -C
* * * * * * *
370789 TTTAAAAAGGTTACCACCAACTCATGTGGGCCTTTGAAAAGGTTTCTACCAACTCGTGTGGGAT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * *
370853 TTTGAAAAAGGTTACCACAAACTCGTGTGGGATTTTGAAAAGTTTGCCACAAACTCATGTGGAC
1 TTTG-AAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * * *
370917 TTTTGAAAAGGTTTCCAACAACTGGTGTGGAC-TTCGAAAAAGTTGTCACTAACTCGTATAGG-C
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
** *** * *
370980 TTTTGAAACTGTTGCCACCAACTC-TCGTAAACTTTTGAAAAGGTTACCACCAACTCATGTGGAC
1 -TTTGAAAAGGTTGCCACCAACTCGT-GTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * * *
371044 TTGTGAAAAGGTTGCCAACAATTGGTGTAGAC-ATTGTAAAA-GTTGCCGCTAACTCGTGT-AAG
1 TT-TGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTG-AAAAGGTTGCCACCAACTCGTGTGGA-
371106 C
63 C
* * * * * * *
371107 TTTTGAAACGGTTGCCACTAACTCTTGTAGACTTTT-AAAAGGTTGCCACCAACTTGTGTCGG-G
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * *
371170 TTTGAAATGGTTGCTAACAATTTGTGTGGACTTTTGGGCTTTTGAAAAGGTTGCCACCAACTCTT
1 TTTGAAAAGGTTGCCACCAA-CT-CGT-G-----TGGGCTTTTGAAAAGGTTGCCACCAACTCGT
371235 GTGGAC
58 GTGGAC
* * * * *
371241 TTTTG-AAAGCTTGCCATCAACTCATGTGGAC-TTTGAAATA-GTTGCCACCAACTCGTGTGTAT
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAA-AGGTTGCCACCAACTCGTGTGGA-
*
371303 T
63 C
* * * * * * * * *
371304 TTTGAAAAGGTTGCCACCTACTCCTATCGGCTTTTGAAAAGGTTACCAACAACTTGTTTGGGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * ** * * *
371367 TTTGAAAAAGTTACCACCAACTCATGTGGCCATTTGTAAACCTTACCACCAACTTGTATAGG-C
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * * *
371430 TTTTGAAAAGGTTGCTACCAACTCATGTGGGATTTT-AAAAGTTTGCCGCCAACTCGTGTTGAAT
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTG-TGGAC
* *** * * * *
371494 TTTGAAAAAGTTGCCACCAACTTAAGTGGGCTTTTGAAAAGATTACCAACAACTTGTGTGGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * *
371557 TTTGAAAAGGCTGCTACCAACTCGTGTGGGCCTTTGAAAAGGTTGCCATCAACTCATGT-GAGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-C
* * * * * * ** ***
371620 TTTTGAGAATGTTGCCACCAACTCGTGCGGAC-TTTCACTATA-G-TGCCACCAACTTTTAAAGA
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGA--AAAGGTTGCCACCAACTCGTGTGGA
371682 C
63 C
* * *** * * * * *
371683 TTTGAAAAGGCTGCCACCAACTGGTAAAGGCTTCTAAAAATGTTG-GACTTTAACT-GTGGTGCC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCAC--CAACTCGT-GTG--
*
371746 ACAAACTC
61 ---GA--C
* * *
371754 GTGTGAACTTTGAAAAGGTTGCCACAAACTCGTGTGGGC-TTTAAAAAGGTTGCC-CTCAATTCG
1 -T-T------TGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCAC-CAACTCG
*
371817 TGTGGGC
57 TGTGGAC
* * * * * * *
371824 TTTGAAAGGGTTGCC-CTTAACTCTTTTGGGC-TTTGAAAATGTTGCCATCAACTCGTGTAGGAT
1 TTTGAAAAGGTTGCCAC-CAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * *
371887 TTTAAAAAGGCTGCCAACAACTCGTATGGGCTTTTGAAAAGGTTGCCACCAACTCATATGGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * *
371950 TTTAAAAAAGTTGCCAACAAGTCGGGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTAGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * ** * * * * *
372013 TTTTGAAAATGTTACCACCAACTCATGTGGAC-TTTGACTACGATGCCACAAACTTGTGTGAAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * * *
372076 CTTGAAAAGGTTACCACTAACTCATGTAGGCTTTTAAAAAGGTTCCCACCAACTCGTGTGCAT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * *
372139 TTTAAAAAAGTTGTCACCAACTCATGTGGGCTTTTGAAAAGGTTGCCAACAACTCGTAT-GAGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-C
* * * * * *
372202 TTTGAAAAGGTTGCCACCAACTTGGGTGGACTTTTGAAAAGGTTACCACCAACTCGTTTGGGCC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * ** ** ** *
372266 TTTCAAAAGGTTGCTACCAACTCATGCAGGCTTTTGAAAATATTGCCATAAACTCGTGTAGGAT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * *
372330 TTTGAAAAGGTTTCCGCCAACTCTTGTGGGCTTTTGAAAAGGTTGCCAACAACTTGTGTGGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * **** *
372393 TTTGAAAATGTTGCCACGAACTCGTGTGGGTTTTTGAAAATGTTAGACTTTGACTATGGTGCCAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTT-GCCACCAAC--TCGTG----
*
372458 AAACTTTTGTAAAC
59 -----TG-G---AC
* * * * * * * * *
372472 TTTGAAAGGGTTACCACTAACTCGTGTGTGC-TTTGAAAAGATTGCCCCCAATTCGTATGGGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * * *
372534 TGTGAAAAGGTTACCCCCAATTCATGTGGAC-TTTGAAAATGTTGCCATCAACTCGTGTGGGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * *
372596 TTATTGAAAAGGCTACCAACAACTCGTGTGGGCTTTCGAAAAGGTTGCCATCAACTCATATGGAC
1 -T-TTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * ** * * * *
372661 TTTG-AAAGGTTGCCACCAATTCGTGTGGGCTTCTG-ATTGGCTGCCATCAACTCGTGTAGATT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-C
* * * * * * * * * *
372723 TTTAAAAAAGTTACCACCAACTCTTGTGGAC-TTTGACTATGG-TGCCACAAACTTGTGTGAAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGA-AAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * * **
372785 ATTGAAAAAGTTGTCGCCAAATCGTGTGGTCTTTTAAAAAGGTTGCCACCAACTCATGTGGGT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * *
372848 TATTGGAAAA-GTTGTCACCAACTCATGTGGGCTTTTAAAAAGGTTGCTAACAACTCGTGTGG-C
1 T-TT-GAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* ** * * ** * * *
372911 TTTGAAATGGTTATCACCAACTCTTGTGGACTTTCAAAAAGGTTACCACCAATTCGTGTGGGCC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * * *
372975 TTTGAAAAGGTTGCCATCAACTCGTGTAGGCTTTT-AAAAGTGCTACCAACAACTTGTGTGGGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAG-GTTGCCACCAACTCGTGTGGAC
* * ** * * * * *
373038 TTTTGAAAAGGTTGACACCAGCTTATATGGAC-TTTAAAAAGGTTGCCACCAATTCGTGTGGGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * * * * *
373101 TTTTGAAATGGTTACCATCAACTCATATAGACTTTTAAAAATGTTACCACCAACTCGTGTAGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
** * * * * ** * * * *
373165 TACGACTATGG-TGCTACAAACTCGTGTGAAC-TTTAAAAAGGTTACCACCAACTCCTGTGGGC
1 TTTGA-AAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * * *
373227 TTTTAAAAAGATTACCACCAACACATGTAGGTTTTTGTAAAA-GTTGCCACTAACTTGTGT-GAG
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTG-AAAAGGTTGCCACCAACTCGTGTGGA-
373290 C
63 C
* * *
373291 TTTTAAAAAGGTTGCCAACAACTCGTGTAGGC-TTTGAAAAAGGTTGCCACCAACTCGTGTGGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTG-AAAAGGTTGCCACCAACTCGTGTGGAC
* * * * **** * * * *
373355 TTTTGACAATGTTGCCACCAAGTCATGCAAAC-TTTGAAATGGTTGGCTCCAACTTGTGTGGGTT
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAAC-T-CGT--G--
373419 TTTGGAC
59 --TGGAC
* * * ** * ** * *
373426 TTTTGAAAAGGTTACCACTATCTCGTGTGAAC-TTTGAAAAGGTTGACATTAAGTCGTGTGGGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * ** * * *
373489 TTTAAAAAAAGTTGCGAGCAACTCGTGTCCGCTTTTGAAAAGGTTGCTACCAACTCATGTGGGC
1 TTT-GAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * ****
373553 TTTTGAAAATGTTGCCACCAACTCGTGTGGAC-TTTGACTTTGTTGCCACCAA-TCTGTGTGGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTC-GTGTGGAC
* * ** * * * * *** * * *
373616 TTTGACTATGG-TGCTGCCAACTTGTATAGAC-TACAAAAAGGTTACCAGCAACTCGTGTGGGC
1 TTTGA-AAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
** ** * * * * ** *
373678 TTTTGAAAATATT-ATACCCAATTCGTGTGGAC-TTTGACTATGG-TGCCATAAACTCGTGTGAA
1 -TTTGAAAAGGTTGCCA-CCAACTCGTGTGGGCTTTTGA-AAAGGTTGCCACCAACTCGTGTGGA
373740 C
63 C
* * * * * *
373741 TTTGTAAAGGTTGCCTCCAACTTC-TGTGGGCTTTTGAAAAGGTTGCCAACAACTCATTTGGGC
1 TTTGAAAAGGTTGCCACCAAC-TCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
** * * *
373804 TTTGAAAATCCTTG-CACCAACTTAG-GTAGACTTTTGTAAAAGG-TGCCACCAACTCGTGTAGG
1 TTTGAAAA-GGTTGCCACCAAC-TCGTGTGGGCTTTTG-AAAAGGTTGCCACCAACTCGTGT-GG
373866 -C
62 AC
* * * * * ** * * * ** * *
373867 TTTTGAAAAGATTACCACGAACTCATATGGGCCATCGAAAAAGATGTTACCAACTCATGTGGGAT
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* ** * * *
373932 TTTGAAAAGGTAT--TACCAACTCAAGTGGGATTTT-AAAAGGGTTGCCACCAACTCGTATGGGC
1 TTTGAAAAGGT-TGCCACCAACTCGTGTGGGCTTTTGAAAA-GGTTGCCACCAACTCGTGTGGAC
* * * * * * *
373994 TTTTGAAAAGGTTGCCAACAACTCATGT-GGATTTTGAAAAGTTTGTCACCAACCCATGTGGGA-
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * ** * * * **
374057 TTCTGAAAAAGTTTCCAACAACTTGTGTGTAC-TTTGAAAAGGTTGTCACCAACAC-TATGTGTT
1 TT-TGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTG-GAC
* * * * * * * *
374120 TTTGAAAAGATTGCTACCAACTCATGTGTGATTTTGAAAAGGTTGTCACCAATTCGTGTGGGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
** * ** * * * *** * * *
374183 TTTTGAAAAGGTTGCCAATAATTTATGTTGAC-TTTGAAAAGTTTATTACTAACT--TGCGACAG
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTG-GA-
374245 C
63 C
* * * * *
374246 TTTTAAAAAGGTTTGCCACCAACTC-TCGTAGACTTTTGAAACGGTTGCCACTAACTCATGTGGG
1 -TTTGAAAAGG-TTGCCACCAACTCGT-GTGGGCTTTTGAAAAGGTTGCCACCAACTC--GT--G
*
374310 CTTTTGGGC
59 ----TGGAC
* * * * * * *
374319 TTTTAAAAAGGTTGTCACTAACAT-GTGT-GGATTTTGAAAAAGTTGCCATCAA-TGCGTGTGGG
1 -TTTGAAAAGGTTGCCACCAAC-TCGTGTGGGCTTTTGAAAAGGTTGCCACCAACT-CGTGTGGA
374381 C
63 C
* * * * * * * *
374382 TTT-AATTAAGGCTGCTACCAACTCGTGTGAGCTTTTGAAATGGTTCCCATCAA-TCATGTGGGC
1 TTTGAA--AAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* ** * * * ** * **
374445 TTTTGAAAATGTTGCCACTTACTCGTGTGGAC-TTTGACTATGG-TGCCACCAACTTTTATAAAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGA-AAAGGTTGCCACCAACTCGTGTGGAC
* ** * ** **** * * *
374508 TTTGAAAAGGTTGCCACCAACTAGTGTGAACTTCTGAAACTGTTGGGCTTTGAATATGGTGCCAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTT--GCCACCAA-CTCGTG---T
**
374573 AAAC
60 GGAC
* ** * *
374577 TCGTGTGAACTTTAAAAAGGTTACCACCAACTCAAGTGGGCTTTTAAAAAGGTTGCTACCAACTC
1 T--T-TG-------AAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTC
* *
374642 GTATGGATT
56 GTGTGGA-C
* ** * * * * * * *
374651 TTTCAAAATATTACCACCAACTTGCGTGGGCCTTTGAAAA-GTTGCTACCAACTCATGTAGGAT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* *** * ** ** * *
374714 TTTAAAAATACTGCCACCAACTCGTGTGGGATTTTGAAAAGGTTATCACCAACTTTTATGGGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
** * * * * * *
374777 TTTTGAAAAGGTTGTTAACAACTTGTGTGGAC-TTTGAAAAGGTTGTCACCAACTCGGGTGGGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * ** * ** * * * *
374840 TTTTGAAAAGGTTACCACCGATTATTGTAGAATTTTAAAAAGGTTGCCACTAACTCGTCTAGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * *
374904 TTT-AAAATGATTGCTACTAATTTGTGTGGGCTTTTAGGCTTTTGAAAAGGTTGTCACCAACTCT
1 TTTGAAAA-GGTTGCCACCAACTCGTGT--G------GGCTTTTGAAAAGGTTGCCACCAACTCG
374968 TGTGGAC
57 TGTGGAC
* * *** * * * * * * * *
374975 TTTTGAAAATGTTACCACCAACTTACGCGAGATTTTAAAAAAGTTGTCACCAGCTCGTGTGGAAT
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGG-AC
* * * * * * * * * *
375040 TTTTAAAAAGTTGCAAACAACTTGTGTGGACTTTTG-AAAGGTTACCACAAACTCATGTAGGCC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * * * ** *
375103 TTTGAAAATGTTTCTACCAACACGTGTGGGATTTTGAAAAGGTTACCACCAACTCTTGCAAGAT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTG-TGGAC
* * * * ** *
375167 TTTGAAAAAGTTGTCACCAACTCGTTTGGGCTTTTGAAAAGATTGTTACCAACTCGTGTGGGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * *** * *
375230 TTTTGAAAAGGTTACCACCAACTCTTACAGACTTTTCAAAAGGTTGCCACCAACTCGTGTGGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* ** * * *
375294 ATTGAAATA-GTTGCTTCCAACTCTTGTGGGCTTTTGAAAAGGTTGCCACCAACTCTTGTAGAC
1 TTTGAAA-AGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * *
375357 TTTTG-AAAGGTTGCC-CCTAACTGGTGTGGAC-TTTGAAATGGTTGCCACCAACTCGTGTAGG-
1 -TTTGAAAAGGTTGCCACC-AACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGA
375418 C
63 C
* * * * * * * * **
375419 ATTTAAAAAGGTTACCACCAACACGTATAGGCTTTTGAAAAGGTTACTACCAACTCATGTACAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * ** * * **
375483 TTTGACTATGG-TGCCACAAACCCATGTGAAC-TTTGAAAAGGTTACCACCAACTCTTGTAGGTT
1 TTTGA-AAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * *
375546 TTTAAAAAGGTTACCACCAATTTGTGTGGGTTTTTGTAAAA-GTTGCCAGCAACTCGTGT-GAGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTG-AAAAGGTTGCCACCAACTCGTGTGGA-C
* * * ** * *
375609 TTTTAAAAAGGTTACCACCAACTCGTGTGGACTTTTGAAAATATTGCCAACAACTGGTGTGGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * * * *
375673 TTTCAAAAGGATGTCACCAACTTGTATGAGCTTTTGAAAAGGTTGCTATCAACTCATGTGGAAT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGG-AC
* * * * * * ** *
375737 TTTGAAAAGATTGTCACCAACTTG-GAAGAGCTTTTGAAAAGGTTGCCAACAACTTATGTGGAT
1 TTTGAAAAGGTTGCCACCAACTCGTG-TGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * ** * * *
375800 TTTGAAAAGGTTGTCACTAACTCGTGTGGGCTTTTGAAAAGGTTGTGACCAGCTC-TCATAGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGT-GTGGAC
* ** * * * **
375863 TTTTGAAAAGGTTGCCACCAACTCATGTGCACTTTTAAAAAGGTTGCCAACAACTTGTGTTAAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * **
375927 TTTGAAAAGGTTGTCACTAACTCGTGTGGGCTTTTGAAAAGGTTACCACCAACTC-TCGTAAAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGT-GTGGAC
* * * *
375990 TTTTAAAAAGGTTACCACCAACTCTAATGGGCCTTTCGGCTTTTGAAAAGGTTGCCACCAACTCG
1 -TTTGAAAAGGTTGCCACCAACTC------G--TGTGGGCTTTTGAAAAGGTTGCCACCAACTCG
*
376055 TGTGCAC
57 TGTGGAC
* * * * ** * *
376062 ATTGAAAATGTTGCCATCAACTTGTGTGGGCTTTTGAAAAGGTTGCCTTCAACTCATGTGGGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * * ** * *
376125 TTTTGAAAATGTTGCCACCAACTTGTGTGGAC-TTTGACTATGG-TACCACAAATTTTTATAGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGA-AAAGGTTGCCACCAACTCGTGTGGAC
** * * * * **** * **
376188 TTTGAAAAGGTTGCCACCAACT-GTGTGAACTTCTAAAAATGTTAGACTTTGACT-ATGATACAA
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTT-GCCACCAACTCGTG-T--GG
376251 AC
62 AC
* * ** ** * * ** * *** * *
376253 TCGTGTAAACTTTGAAAAGGTTGCCACCAAC-TCAAGCGAGGTTTTAAAAAGTTAGCCACCAACT
1 T-TTGAAAAGGTTG-CCA-----CCAAC-TCGT-GTGGGCTTTT-GAAAAGGTT-GCCACCAACT
* *
376317 CG-GATTGATT
55 CGTG-TGGA-C
* ** ** ** * * * *
376327 TTTAAAAAGGTTATCACCAACTTATGTGGGCTTTCAAAAAAGTTGCTACCAATTCGTGTGAGAT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTG-GAC
* * * *
376391 TTTGAAAAGGTTACCACCAACTCGTGTGGGATTTTGAAAAGGTTGCCACCAACTCATATGGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * *
376454 TTTTGAAAAAGTTGCCAACAACTAGTGTGGAC-TTTGAAAAAGTTGTCACTAACTCGTGT-AAGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-C
* * * * * * *
376517 TTTTGCAACGGTTGCCACCAATTCTTGTAGACTTTTGAAAAGGTTGCCACCAACTCGTGTAGG-G
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * *
376581 TTTGAAATGGTTGCCAACAATTCGTGTGGGCTTTTGGGCTTTTGAAAAGGTTGCCATCAACTCTT
1 TTTGAAAAGGTTGCCACCAACTC--GT--G----TGGGCTTTTGAAAAGGTTGCCACCAACTCGT
376646 GTGGAC
58 GTGGAC
* * * * * * *
376652 TTTTG-AAACGTTGCCATCAACTCATGTGGAC-TTTGAAATA-GTTACAACCAACTTGTGTGGAT
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAA-AGGTTGCCACCAACTCGTGTGGA-
*
376714 T
63 C
* * * *** * * *
376715 TTTAAAAAGGTTACCACCAACTTGTGTGAATTTTTGAAAAGGTTGCCATCAACTCCTGTCGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * *
376778 TTTTGAAAAGGTTACCAACAACTCGTTTGGGC-TTTGAAAAAGTTTCCACCAACTCATGCGGCC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
*** * * * * * *
376841 ATTTGCAAACCATAG-CACCAACTCGTATAGGCTTTTGAAAAGGTTGCTACTAACTCATGTGGGA
1 -TTTG-AAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGA
*
376905 T
63 C
* * * ** * *
376906 TTTG-AAAGTTTGCCACAAACTCGTGTTGAATTTTGAAAAGGTTGCCACCAACTCATGTGGGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* ** * * * * * *
376968 TTTTGAAAAGGTTGCCAACAACTTTTGTGGAC-TTTGAAAAGGCTACTACCAACTCATGTAGGCC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * *
377032 TTTGAAAAGGTTGCCATCAACTCATGTGAGTTTTTGAGAATGTTGCCACCAACTCGTGTGGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
** * * ** * * * ** *
377095 TTCCACTATGG-TGCCACCAACTTTTATAGAC-TTTGAAAAGGTTGCCACCAACTTATGT-AAGC
1 TTTGA-AAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-C
* * * *** * ** * *
377157 TTCTGAAAATGCTAGACTTTAACT-ATGGTGCCACAAACTTGTGTGAACTTTGAAAAAGTTACCA
1 TT-TGAAAA-GGTTGCCACCAACTCGT-GTG-----GGC-T-T-T------TGAAAAGGTTGCCA
* *
377221 CAAACTGGTGTAGGA-
49 CCAACTCGTGT-GGAC
* * * * * *
377236 TTTGAAAAGGTTGCCCCCAATTCGTGCGGGC-TTTGAAAAGGTTGCC-CTCAACTCATTTGGGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCAC-CAACTCGTGTGGAC
* * * * * * * * * *
377298 TTTGAAAAGGTTACCATCAACTAGTGT-AGCATTTTAAAAAGGCTACCAACAACTTGTGTGGGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGC-TTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * *
377361 TTTTGAAAAGGTTGCCACCAATTCATATGGAC-TTTCAAAAGGTTGCCACTAACTCGGGTGGGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * *
377424 TTTTAAAAAGGTTGCCACCAACTCGTATAGACTTTTGAAAATGTTACCACCAACTCATGTGGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * ** * ** *
377488 TTTGACTATGG-TGTCACAAACTTGTGTGAAC-CTTGAAAAGGTTGCTGCCAACTCGTGTGGGC
1 TTTGA-AAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * *
377550 TTTTAAAAAGGTTCCCA-CAACTCGTGTGGG-TTTTAAAAAGGTTGCCACCAACTCATATGGGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * *
377612 TTTTGAAAAGATTGCCAACAACTCGCAG-GAGC-TTTGAAAAGGTTGCCACCAACTCGTGTGGCC
1 -TTTGAAAAGGTTGCCACCAACTCG-TGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * *
377675 TTTTGAAAAGGATACCACCAACTCGTTTGGGCTTTTGAAAAGGTT-CCTACCAACTCATGCAGGA
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCC-ACCAACTCGTG-TGGA
*
377739 T
63 C
* * ** * * ** * * * *
377740 TTTG-AAA---TGCCATCAACTCATGTCAGATTTTGAAAAAGTTTTCTCCAACTCTTCTGGGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * *
377799 TTTTATAAATGTTGCCAACAACTTGTGTGGAC-TTTGAAAAGGTTACCACCAACTCGTGT-GAGC
1 TTTGA-AAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-C
* * **** * *** ** ** ** **
377862 TTCTGAAAATGTTAGACTTTGACTATGGTGCCATAAACTCATGTGAACTTTGAAAAGGTTGCC--
1 TT-TGAAAAGGTT-GCCACCAAC--TCGTG---TGGGCTTTTGAAAAGGTTG-CCA-----CCAA
* * * *
377925 CCCAATTTGTGTGGGC
53 CTC-GTGT----GGAC
* * * * *
377941 TTTGAAAAGGTTGCC-CCTAACTCATGTGGAC-TTTGAAAAGGTTGCCATCAACTCATGTGGGC
1 TTTGAAAAGGTTGCCACC-AACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * ** * * ** * * * * *
378003 TTTTAAAAAAGCTT-CCAATAGCACGTGCAGTCTTTTGAAAAGGTTGCCATCAAGTCATATGGAC
1 -TTT-GAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * *
378067 TTTAAAAAGGTTGCCACCAATTCGTGTGGGCTTTTGAAATGGTTGCAATCAACTTGTGTAGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * * * * * *
378130 TTTTTAAAATGTTACCACTAACTCTTGTGGAC-TTTGACTATGG-TGCCACAAACTTGTGCGAAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGA-AAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * **
378193 TTTGAAAAAGTTGTCGCCAAATCGTGTGGGCTTTTAAAAAGGTTGCCACCAACTCTTGTGGGT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * ** * * **
378256 TGTTGAAAAAGTTGCCACCAACTCTTGTGGGCTTTCAAAAAGGTTGCCAACAACTCATGCAG-C
1 T-TTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
** * * * * * * *
378319 TTTGAAAAGGTTTTCACCGACTAGTGTGGACTTTTGAAAATGTTACCACCAACTCGTATGGGCC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * ** *
378383 TTTGAAAAGATTGCCCCCAATTCATGTGGAC-TTTGAAAAGGTTATCATCAACTCGTGTGGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * * *
378445 TTTTAAAAAGGCTACCGA-CAATTTGTGTGGGCTTTTGAAAAGGTTACCACCAACTCATATGAAC
1 -TTTGAAAAGGTTGCC-ACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * **
378509 TTTAAAAAGGTTGCCACTAATTCTTGTGGGCTTTTGAAATGGTTGCCATCAACTCCTGTCAAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * * * * * *
378572 TTTTAAAAACGTTACCACTAACTTGTGTAGAC-TTTGATTATGG-TACCACAAACTCGTGTGAAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGA-AAAGGTTGCCACCAACTCGTGTGGAC
* * * * ** **
378635 TTTGAAAAGGTTACCACTAACTCGAGTGGGCTTTTAAAAAGGTTATCACCAACTCGTGTGGGTT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * *
378699 TTTGTAAAA-GTTGCCAACAACTTGTGTGAGCTTTT-AAAATGGTTGCCAACAACTTGTGTGGAC
1 TTTG-AAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAA-GGTTGCCACCAACTCGTGTGGAC
* ** * *
378762 TTTGAAAAGGTTGCCACCAACTCGTGTGGACTTTTGAAAATATTGCCAACAACTTGTGTGGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * *
378825 TTTGAAATA-GTTGCCACCAACTCATGTAGAG-TTTTGAAAAGGTTGCTACCAACTCATATGGAT
1 TTTGAAA-AGGTTGCCACCAACTCGTGT-GGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-
*
378888 T
63 C
* * * * * *
378889 TTTGAAAAGGTTGCCACCAACTCGTGTGGACTTTTTATAAGGTTGCCAACAACTCGCGTGGGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* ** * * ** * * * *
378952 TTTGAAAAGGTTGCCACCAACTTGTGTGAACTATTGAAAAAGTTATCACAAACTCATATAGGCC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * ** *
379016 TTTGAAAAGGTTGCTACCAACAT-GTATGTGATTTTGAAAAGGTTACCACCAACTAATGCGAGA-
1 TTTGAAAAGGTTGCCACCAAC-TCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTG-GAC
* ** * * *
379079 TATTGAAAAAGTTATCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCAACAACTTGTGTAGAC
1 T-TTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
** * * * * * *
379143 TTTGAAAAGGTTGTTACCAACTCGTGTGGACTTTTGTAAAGGTTACTACCAACTCTTGTAGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * ** **
379206 TTTTCAAAAGGTTACCACCAACTCATGT-GGATATTGAAATA-GTAACTTCCAACTCTTATGGGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAA-AGGTTGCCACCAACTC------G-
* *
379269 TTTTGGGC
57 -TGTGGAC
* * * * * *
379277 TTTTGAAAAGGCTGCCACCAACTCTTGTAGACTTTTG-AAAGGTTGCCATCAACTCATGTGGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * **
379340 TTTCAAATGGTTGCCACCAACTCATGTGGGCTTTTGAAAAAGTTACCACCAGCACGTGTAGGTT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * * * * ** * *
379404 TTTGAAAAAGTTACTACCAACTC-TATAGAC-TTTGACTATGG-TGCTGCAAACTCGTGTGAAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGA-AAAGGTTGCCACCAACTCGTGTGGAC
* * ** * * * * *
379465 TTTGAAAAGATTACCAATAACTCCTATGGGCTTTT-ACAAAGGTTACCACCAACTCAT-TTGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGA-AAAGGTTGCCACCAACTCGTGTGGAC
* * * * *
379527 TTTTTGTAAAA-GTTACCACCAACTCGTGTGGGCTTTTAAAAAGGTTGCCAACAACTCATGCAGG
1 --TTTG-AAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTG-TGG
379591 -C
62 AC
* * * * * *
379592 TTTGCAAAGGTTGCCACCAACTCATGTGGACTTTTGAAAATGTTGCCAACAACTTGTGTGGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * ** * * *
379655 TTTGAAAAGGTTGTCACCATCTCCTTTAAGCTTTTGAAAAGGTTGCTACCAACTCATGTAGGAT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * **
379719 TTTGAAAAGGTTGCCACCAACTTGTGTGAGCTTTTGAAAAGGTTGCTAACAACTTATGTGGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * ** * * * *
379782 -TTAAAAAGGTTGTCACCAATTCATGTGGATTTTTCAAAAGGTTGCGACCAATTC-TCGTAGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGT-GTGGAC
* * * * *
379844 TTTTGAAAAGGTTGCTACCAACTCGTGTGGGCTTTTGGGCTTTTGAAAGGTTGCTATCAACTCAT
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTT--G-----AAAAGGTTGCCACCAACTCGT
379909 GTGGAC
58 GTGGAC
* * * * * *
379915 TTTGGAATGATTACCACCAACTCGTGTGGGCCTTTT-AAAAGGTTACCACCAACTCGTGTAGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGG-CTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * **
379978 TTTGAAAAGGTTGCCACCAACTCGTGTAGG-TAATTGAAAAAGTTACCACCAACTCACGTAGG-C
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCT-TTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * ** *
380041 TTTTAAAAATGTTGACAACAACTCGTGT-GGC-TTTGAGAAGGTTATCACCAACTCGTATGGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * ** * ** *
380103 TTCTTAAAAGGTTACCACCAACTCGTGT-GGCTTTTGAAAAGGCTGTTACGAACTTATATGGGA-
1 TT-TGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * * ** * *
380166 TATTAAAAATGTTGCCATCAACTCATGTGAGATTTTGAAAAGGTTGCTGCTAACTCGTGTGGGC
1 T-TTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * * *
380230 TTTTGACAAA-GTTGCTACCAACTCTTATAGACTTTTGAAAAAGTTGCCATCAACTCTTGTGGGC
1 -TTTGA-AAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * **
380294 TTTGAAATGGTTACCACAAATTTGTGTGGGCTTTTGGACTATTGAAAAGGTTGCTACCAACTTTT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGC---T----T-TTGAAAAGGTTGCCACCAACTCGT
***
380359 ACAGAC
58 GTGGAC
* ** * * ** * *
380365 TTTTG-AAAGGTTGCTATTAATTCATGTGCAC-TTTGAAATA-GTTGCCACCAACTTGTGTGAAT
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAA-AGGTTGCCACCAACTCGTGTGGA-
*
380427 T
63 C
* ** * ** *
380428 TTTTAAAAGGTT-CTTGCCAACTCGTCTGGATTTTTGAAAAGGTTGCCACCAACTCCTGTCGG-C
1 TTTGAAAAGGTTGC-CACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * * **
380491 TTTTGAAAAGGTTGCCAACAACTCATTTGGGC-TTTGAAAAAGTTGTCACCAACTTGTGTGCCC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * *
380554 ATTTGCAAAGCTTACCACCAACGT-GTGTAGGCTTTTAAAAAGGTTGCTACCAACTCGTGCAGGA
1 -TTTGAAAAGGTTGCCACCAAC-TCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTG-TGGA
*
380618 T
63 C
* * * * * ** *
380619 TTTG-AAAGGTCGTCACCAACTCATGTGAGCTTTTAAAAAGGTTGCCAATAACTCGTGTGGGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* ** * * * *
380681 TTTGAAAAGGTTGCTACCAACTCGTGTGAACTTTTGGAAAGGTTCCCACCAACTCATGTCGGCC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * * * *
380745 TTTGAAAAGGTTGCTACCAACTCATGTGAGCTTTTGAAATGATTGCCACCAACTCTTCTAGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * *
380808 TTTTGAAAAGGTTGCCACCAACTCGTGTGGAC-TTTGAAATGGTTTCCACTAATTCGTGTGGGCT
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTC--GT--G--
*
380872 TTTGGGC
59 --TGGAC
* * * * ** *
380879 TTTTGAAAAAGTTGCCACCAACTCTTGTGGACTTTTG-AAAGGTTGGCATTAACTAGTGTGGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * ** * *
380942 TTTGAAATA-GTTAG-CACTAACACGTGTAGATTTTTCAAAAGGTTGCCACCAACTCCTGT-GAG
1 TTTGAAA-AGGTT-GCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-
381004 C
63 C
* * * * * * *
381005 TCTTGAAGAGGTTGCCACCAACTCGTGTGGACTTTTGCAAAGGTTGCCACTAACCCAT-TGGGC
1 T-TTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * * * *
381068 TTTTGAAATGGTTACCACCAACTCGTGTGAGCCTTT-CAAATGTTACTACCTACTCGTGTAGGAT
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* ** * * * * * **
381132 TTTG---A----GCGACCGGCTCGAGTGGGATTTTGGAAAGGTTACCACCAACTTGTGTGGGTT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * * * ** *
381189 TTTGAAAAGGTTGCCAACAAGTTGTGTGGAC-ATTGAAAAAGTTGTCATTAACTTGTGTGGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * ** * * * **
381251 TTTTGAAAAAGTTTCTAATAACTTGTGTGGAG--TTTGAAAAGGTTGTCACTAACTC-TGTGGTT
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGG-GCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * ** *
381313 TTTGAAAAGGTTGCTACCAACTCGTATGTGATTTTGAAAAGATTACTACCAACTTATGTGGGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * ** * * ** * *
381376 TTTTGAAAAGGTTGCTAACAACTTATGTTGAC-TTTGAAAAGGTTGTTACTAACTCGTGTGGGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * ** *
381439 TTTTTAAAGAAAAGGTTGCCAACTACTTGTGTAGAC-TTTGAAAAGGTTGTTACCAACTCATGTG
1 --TTT---GAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTG
*
381503 GGC
61 GAC
* * * * * * *
381506 TTTTGAAAAGGTTGTCC-CTAACTCTTGTAGACTTTTCAAAAGGATGCCACCAACTCGTATGGAC
1 -TTTGAAAAGGTTG-CCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * ** *
381570 ATTGAAATA-GTTACTTCCAACTCTTGTGGGCTTTTGGGCTTTTGAAAAGGTTGCCACCAACTCT
1 TTTGAAA-AGGTTGCCACCAACTC--GT--G----TGGGCTTTTGAAAAGGTTGCCACCAACTCG
**
381634 TGTAAAC
57 TGTGGAC
* * * * * * * *
381641 TTTTG-AAAGGTTGCCATCAACTCGTGTAGAC-TTTGACATGGTTGCCGCAAACTCATGTAGG-C
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * ** * * * * *
381703 TTTTGAAAAGGTTGCTACTAGCACATGTACGCTTTTGAAAAAGTTACTACCAACTCCTGTAGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * ** * * * *
381767 TTTGACTATGG-TGCCACAAACTCGTGTGAAC-TTTGAAAAGGTTACCACTAACTCATGTGGGC
1 TTTGA-AAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * *
381829 TTTTAAAAAGGTTACCACCAACTCGTGTGGG-TTTCTGTAAAA-GTTACCACCAACTCATGTGAA
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTT-TG-AAAAGGTTGCCACCAACTCGTGTGGA
*
381892 A
63 C
* * * * *
381893 TTTTAAAATGGTTGCCAACAACTCGTGTAGGC-ATTGAAAAGGTTGCCACCAATTCGTGTGGAC
1 TTTGAAAA-GGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * ** *
381956 TTCTAAAAATGTTGCCAACAACTTGTGCGGAC-TTTGAAAGGGTTGTTAGCAACTCGTGT-GAGC
1 TT-TGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-C
* * * * * * *
382019 TTTTGAAGAGGTTGCTACCAACTCATGTGGGATTTTGAAAAGGTTACCACCATCTTGTGT-GAGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-C
* ** * ** * * *
382083 TTTTGGAGTGGTTGCCAACAACTTATGT-GGATTTTGAAAAGGTTGTCACCAACTCATGT-GAGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-C
* * * * *
382146 TTTTGAAAAGGTTGCGACCAACTC---T-CG-TTTTGAAAAGGTTACCACCATCTTGTGT-GAGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-C
* ** * ** * * *
382205 TTTTGGAGTGGTTGCCAACAACTTATGT-GGATTTTGAAAAGGTTGCCACCATCTCATGTGGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* ** ** * ** * * *
382268 TTTGAAAAGGTTGACATTAACTTATGTGGGC-TTTAAAAAGAGCAGCGACAAACTCGTGTCTG-C
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAG-GTTGCCACCAACTCGTGT-GGAC
* * * * * * *
382331 TTTTGAAAAGGTTGCTACCAATTCATGTCGTCTTTTGAAAATGTTACCACCAACTCGTGTGGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
***** * * * * * * * * * *
382395 TTTGACTTTATTGCCACCAACTTGTCTGGAC-TTTGACTATGG-TACCGCCACACTTGTATAGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGA-AAAGGTTGCCACCA-ACTCGTGTGGAC
* * * * ** * *
382458 TTTAAAAAGATTACCAGCAACTCGTGTGGGCTTTTGAAAATATT-ACATCCAACTCGTGTAGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCA-CCAACTCGTGTGGAC
* * * ** ** * * *
382521 TTTGACTATGG-TGCTATAAACTCGTGTGAAC-TTTGTAAAGGTTGCCACCAACTCCTGTGGGC
1 TTTGA-AAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * *
382583 TTTTGAAAAGGTTACCAACAACTCGTTTGGGC-TTTGAAAATCG-TGCCACCAACACATGTGCAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAA-GGTTGCCACCAACTCGTGTGGAC
* * ** *
382646 TTTTGCAAAAGG-TGCCACCAACTCGTGTGCGCTTTTGAAAAGGTTACCACCAACTTATCTGAGA
1 -TTTG-AAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTG-GA
*
382710 T
63 C
* * * * * * *
382711 TTTGAAAAGG-TGCTACCAACTCGAGTGAGATTTT-AAAAGGGTTGTCACAAACTTGTGT-GAGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAA-GGTTGCCACCAACTCGTGTGGA-C
* * * * * * * * * *
382773 TTTTGAAAAGGTTGCGAACAACTTGTAT-GGATTTTGAAAAAGTTGTCATCAACCCGTGTGGGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * * **
382836 TTTTGAAAAAGTTTCCAGCAACTTGTGTGGAC-TTTGAAAAAGTTGTCACCAACAC-TGTGGGTT
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * *** *
382899 TTTGAAAAGATTGCTACCAACTCATGTGCTATTTTGAAAAGGTTGCCACCAACTCGTGTAGACC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-C
* * ** * * ** * * **
382963 TTCG-AAAGGTTGCCAACAACTTATGTTGAC-TTTGAAAAGGTTGTTACTAACTCGCG-ACAGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-C
* ** * *
383024 TTTTGAAAAGGTTACTGCCAACTCGTGTAGGCTTTTAGGCTTTTGAGAAGGTTGCCACTAACAT-
1 -TTTGAAAAGGTTGCCACCAACTCGTGT--G------GGCTTTTGAAAAGGTTGCCACCAAC-TC
383088 GTGTGGAC
56 GTGTGGAC
** ** * * * * *
383096 TTTGAAAAGGTTGCCATTAAGACGTGTGGGC-TTTAAATAAGGCTGCTACCAACTCATGTGGGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAA-AAGGTTGCCACCAACTCGTGTGGAC
* * * * * ** * **
383159 TTTTGAAAATGTTGCCACTAACTCGTGTGGAC-TTTGACTATGG-TGCCACCAACTTTTATAAAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGA-AAAGGTTGCCACCAACTCGTGTGGAC
** * * * * * ** *
383222 TTCAAAAAGGATGCCATCCAACTAGTGTGAGCTTTTGAAAATGTTG-GACTTTGACT-ATGGTGC
1 TTTGAAAAGGTTGCCA-CCAACTCGTGTGGGCTTTTGAAAAGGTTGCCAC--CAACTCGT-GTG-
*
383285 CACAAAC
61 ----GAC
** ** * ** * ****** *** ** ** * * ***
383292 GCGTGTGAAGTTTG--AAAAGATTAC-CACCAACCCATG--AAGGCTT-TTAAAAAGGTTGCCAA
1 -TTTGAAAAGGTTGCCACCA-ACT-CGTGTGGGCTTTTGAAAAGG-TTGCCACCAA-CTCG-TGT
**
383351 CAAC
60 GGAC
* * ** * * **** * * * *** *
383355 TCGTGTAGAATTTTG--A--AAAT-GT-T--AC-AACCAACTCATGTGGGCCTTTGAAAT-G-GT
1 T-TTG-AAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAA--AAGGT-TGCC-ACCAACTCGTGT
*
383409 TG-C
60 GGAC
*** *** * * ***** ** * *
383412 TACCAATTCGTT--TA--AGA-T--TTTGAAAAAGTT-ACCA-----CCAACTC-A-T-GTGGGA
1 TTTGAAAAGGTTGCCACCA-ACTCGTGTG-GGCTTTTGAAAAGGTTGCC-AC-CAACTCGTGTGG
**
383461 TT
62 AC
** * * ** * ** ** * * ** * * ** * *
383463 TTGAAAAGGTTACCACCAACTC-A-T-TTG-GGCTTTTGAAAATGTTGCCAACAATGTTGACTTT
1 TTTGAAAAGGT--TGCC-AC-CAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCG--TGT
* *
383524 GAAAAAG
60 G---GAC
* * * **** *** ** ****
383531 TTGTCACCAACTCGGGTGGGCTTTTGAAAAGGT-TGCCACCAACTATTGTGGAATTCTAAAAAGG
1 TT-TGA--AA---AGGT-TGC-CACCAACTCGTGTG-----GGCT-TT-T-GAA----AAGGTTG
** *
383595 TTACCACTAACTCGTGTAGAC
46 CCACCA---ACTCGTGTGGAC
* * * *
383616 TTTGAAATGGTTGTCACCAATTCGTGTGGGTTTTCAGGCTTTTGAAAAGGTTGCCACCAACTCTT
1 TTTGAAAAGGTTGCCACCAACTCGTGT--G------GGCTTTTGAAAAGGTTGCCACCAACTCGT
383681 GTGGAC
58 GTGGAC
* ** * *** * * * ** *
383687 TTTG-AAAGGTTGTCGTCAACTCTTACAGAC-TTTGAAATA-GTTGCCACTAACTCATGTACAGT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAA-AGGTTGCCACCAACTCGTGTGGA-C
* * * *
383749 TTTGAAAAGGTTGCTACCAACTCGTGTGGGTTTTTGAAAAGGTTGCTACCAACTCATGTGGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * ** *
383812 TTTTTATAAGGTTGCCAACAACTCACGTGGGC-TTCGAAAAGGTTGCCACCAACTCGTGTGGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
** ** * * *
383875 TATTGAAAAGGTTATCATAAACTCGTG-GAGGCCTTTGAAAAGGTTGCTACCAACAT-GTATGTG
1 T-TTGAAAAGGTTGCCACCAACTCGTGTG-GGCTTTTGAAAAGGTTGCCACCAAC-TCGTGTG-G
*
383938 AT
62 AC
* * * * * * * * * ** *
383940 TTTGAAAAGGTTACCTCTAATTCATGCGAGATTTTGAAAAAGTTATCACCAACTTGTGT-GAGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-C
* * * * * *** *
384003 TTTTAAAAAGGTTGCCAACAACTTGTGTAGAC-TTTGAAAAGGTTATTACCAACTCGTGTGGGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * *
384066 TTTTGAAAAGGTTACTACCAACTCTTGTAGACTTTTCAAAAGGTTGCCACCAACTCATGTAGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * ** ** * * *
384130 ATTGAAATA-GTGGCTTCCAACTTTTATGGGCTTTTGGGCTTTTAAAACGGATGCCACCAACTCT
1 TTTGAAA-AGGTTGCCACCAACTCGTGTGGGCTTTT--G-----AAAA-GGTTGCCACCAACTCG
*
384194 TGTAGAC
57 TGTGGAC
* ** * * * * * *
384201 TTTTG-AAAGGTTGCCATCAACTTATGTGGAC-ATTCAAATGGTTGCCACTAACTCGTGTGGGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * * *
384263 TTTTGAAAAGGTTACCATCAACACGTGTAGGCTTTTGAAAAAGTTACTACCAACTCATGTAGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * ** * * ** * * *
384327 TTTGACTATGG-TGCCACAAACCCGTGTGAAC-ATTGAAAAGGTTACCAGTAACTCCTATGGGC
1 TTTGA-AAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * *
384389 TTTTAAAATGGTTACCACTAACTTGTGT-GGCTTTTTGTAAAA-GTTGCCACCAACTCGTGT-GA
1 TTTGAAAA-GGTTGCCACCAACTCGTGTGGGC-TTTTG-AAAAGGTTGCCACCAACTCGTGTGGA
384451 GC
63 -C
* * * *
384453 TTTTAAAAAGGTTGCCAACAACTCGTGTAGGC-TTTGAAAAGGTTGCCACCAACTCATGTGGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * ** * * *
384516 TTTTGAAAATGTTGCCAACAACTTATGTGGAC-TTTGAAAAGGTTGTCACCAACTCCTGT-GAGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-C
* * * * * *
384579 TTTTGAAAAGGTTGCTACCAACTCATGT-GGATTTTGAAAAGGTTGCCACTAACTTGTAT-GAGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-C
* ** ** * * * * *
384642 TTTTGGAAAGGTTGCCAATAACTTATGTGGAC-TTTAAAAAGGTTGTCATCAACTCGTGTGGGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
** * * * * * *
384705 TTTTGAAAAGGTTGTGACCAACT-TTCATAGACTTTTGAAAAGGTTACCACCAACCCGTGTAGG-
1 -TTTGAAAAGGTTGCCACCAACTCGT-GTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGA
384768 C
63 C
* * * * * * * *
384769 TTTTGGGCTTTTGAAAGGTTGCTATCAACTCGTGTAGAC-TTTGAAATGATTACCACCAACTCGT
1 -TTT--G-----AAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGT
*
384833 GTCGGCC
58 GT-GGAC
* * * *** *
384840 TTTTAAAAGGTTACCACTAACTCGTGTACAC-TTTAAAAAGGTTGCCACCAACTCGTGTAGGTA-
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GG-AC
* * * ** ** * *
384903 GTTGAAAAAGTTTCCACCAACTCACGCAGGCTTTTGAAAAGGTTGACAACAACTCGTGTGG-C
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* ** * * * * * * * *
384965 TTTGAAAATGTTATCACCAACTCATATGGACTTCTGAAAAGGTTACCGCCAACTCATGTGGGCC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * * * * * *
385029 TTTGAAAAGGTTGCTACCAACTCATATGGGATTTTAAAAATGTTGCCATCTACTCATGTGAGAT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTG-GAC
* * * * * * **
385093 TTTGAAAAGGTTGGTC-CTAACTCGCGTGGGCTTTTGAAAAAGTTGCTACCAACTCTTGAAGAC
1 TTTGAAAAGGTT-GCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * ** * * * * *
385156 TTTTAAAAAAGTTATCATCAACTCGTGTGGGC-TTTGAAATGGTTACCACCAATTTGTGTGGGCT
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAA-CT-CGT--G--
*
385220 TTTGGGC
59 --TGGAC
** *** * * *
385227 TATTGAAAAGGTTGCCACCAACTTTTACAGACTTTTG-AAAGGTTGCTATCAACTCGTGTGGAC
1 T-TTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* *** * *
385290 TTTGAAATA-GTTACCACCAACTCGTGTGAATTTTTGAAAAGGTTCCCACCAACTCGTGTGGATT
1 TTTGAAA-AGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-C
** * * ** * * *
385354 TTTGAAAAGGTAACCACCAACTCCTATTGGG-TTTTGAAAAGGTTGCCAATAACTCATTTGGGC
1 TTTGAAAAGGTTGCCACCAACTCGT-GTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * *
385417 TTTGGAAAA-GTTGCCACCAACTTGTGTGGCCATTT-ACAAAGCTTACCACCAACTCGTGTAGG-
1 TTT-GAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGA-AAAGGTTGCCACCAACTCGTGT-GGA
385479 C
63 C
* * * * ** *
385480 TTTTGAAAAGGTTGCTACCAACTTGTGTAGGATTTTG-AAAGGTTGTTACCAACTCATGTAGG-C
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * *
385543 TTTTGAAAAAGTTGCCAACAACTCGTGTGGGC-TTTGAAAATGTTGCTACCAACTCGTGTGGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * *
385606 TTTTGAAAAGATTCCCACCGACTCATGTGGGCCTTTGAAAAGGTTGCTACTAACTCGTAT-GAGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-C
* * * * * *
385670 TTTTGAAATGATTGCCACCAACTCTTCTAGACTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * *
385734 TTTGGCAAAGGTTGCCACCAACTCATGTGGGCTTTTGAAATA-GTTACCACCAACTCGTGTGGGC
1 TTT-GAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAA-AGGTTGCCACCAACTCGTGT-GGA
385798 C
63 C
* ** * * * *
385799 TTTG-AAAGGTTGCTACCAACTCGTGTCAGATTTTGAAAAGGTTGCGACCAACTCGAGTGGGAT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * * **
385862 TTTGGAATGGTTGCCACCAACTTGTGTGGGTTTTTGAAAAGGTTGCCAACAAGTTATGT-GAGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-C
* * * ** * * * *** * * ** *
385925 ATTGGAAAGGTTGTCATTAACTCATGTGGACTTTTGAAAAAGTTTTTAACAACTTGTGTAAAG
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * *
385988 TTTGAAAAGGTTGTCACCAACTC-TAT-GGTTTTTGAAAAGGTTGCTACCAACTCGTGTGTGAT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTG-GAC
* * * * * ** *
386050 TTTGAAAAGGTTACTACCAACTCATGTGGGCTTTTGAAAAGGTTGCTAACAACTTATGTTGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
*** * * * * * *
386113 TTTGAAAAGGTTATTACTAACTCATGTGGGCTTTTTAAAAAAAGGTTGCCAACAACTTGTGTAGA
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGC-TTTT--GAAAAGGTTGCCACCAACTCGTGTGGA
386178 C
63 C
** * * * *
386179 TTTGAAAAGGTTGTTACCAACTCGTGTGGGCTTTTGAAAAGGTGGACC-CTAACTCTTGTAGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTG-CCACCAACTCGTGTGGAC
* * * * * **
386242 TTTTCAAAAGGTTGCCACCAACTCGTATGGAC-ATT-AAAATAGTTGCTTCCAACTCTTGTGGGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAA-GGTTGCCACCAACTC--GT--G-
*
386305 TTTTGGGC
59 ---TGGAC
* * * * *
386313 TTTTGAAAAGGTTGCCACCAACTCTTGTAGACTTTTG-AAAGGTTGTCATCAACTCGTGTGGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * *
386376 TTTGAAATGGTTGTCACCAACTCGTGT-GGCTTTTGAAAAGGTTACTAGCAGCAT-ATGTAGG-C
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAAC-TCGTGT-GGAC
* * * * * * * * * * *
386438 TTTTAAAAAAGTTACTACCAACTTGTGTAGAC-TTTGACTATGG-TGCCACAAACTCGTGTGAAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGA-AAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * * *
386501 TTGGAAAAGGTTACCACTAACTCATGCGAGCTTTTAAAAAGGTTACCACCAACTCGTGTGAGAT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTG-GAC
* * * * * * *
386565 TTTAAAAAGGTTGCCAACAACTCGTGTAGGC-ATTGAAAAGATTACCACCAACTTGTGTAGG-C
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * ** * * * * *
386627 ATCTGAAAATGTTGCAAACAACTTATGTGGAC-TTTGAAATGGTTACCACCAACTTGTGTGGGCC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* ** * * * * *
386691 TTTG-AAAGGTTGCTACCAACTCGTGTCAGATTTTGAAAAGGTTGCGACCAACTTGAGTAGGAT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * * *
386754 TTTGGAAAGGTTGTCACCAACTC-TGT-GGTTTTTGAAAAAGTTGCTACCAACTCATGTGTGAT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTG-GAC
* * * * * * *
386816 TTTGAAAAAGTTACTACCAACTCTTGTAGACTTTTG-AAAGGTTGCCATCAACTCGTGTGGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * **
386878 TTTGAAATGGTTGCCACCAACTCGTGTAGGCTTTTGAAAAGGTTACTACCAACAAGTGTAGG-C
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * * * * * *
386941 TTTTGAAAAAGTTACTATCAACTCGTATAGAC-TTTGACTATGG-TGCCA-CAACCTCGTGTGAA
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGA-AAAGGTTGCCACCAA-CTCGTGTGGA
387003 C
63 C
** * * * * **
387004 TTTGAAAAGGTAACCACTAACTCCTGTGGGCTTTTAAAAAGGTTACCACCAACTCGTGTGGGT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * ** * * * *
387067 TTCTCCAAAA-GTTACCGCTAACTCGTGTGAG---AT--AAAGGTTGCTGCTAACTCATCTTGAC
1 TT-T-GAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* ** * * * * * *
387126 TTTTGAAAAGTTTGCCACCAACTATTGTAGACTTTTGAAAAAGTTACCACCAACTCATGTGGGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * **
387190 TTTGAAATGGTTGCTACCAATTTGTGTGGACTTTTGGGCTATTAAAATGGTTGCCAGCAACTTTT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTT--G-----AAAA-GGTTGCCACCAACTCGT
** *
387255 ACGGATT
58 GTGGA-C
* * * * * * * * * *
387262 TTTG-AAAGGTTGCTATCAACACGTGTGGAC-TTT-AAAATAGTTTCCACCAACACATGTGAATT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAA-GGTTGCCACCAACTCGTGTGGA-C
* * ** * * *
387324 TTTGAAAAAGTTGCCACCAACTCGTGTAGATTTTTGAAAAGGTTGCCACCATCTCCTGT-CAGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-C
* * * * * * *
387387 TTTTGAAAAGGTTACCAACAACTCATTTGGGC-TTTGAAAAAGTTGCCACCAACTTGTGTGGCC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * ** ** * * * *
387450 ATTTGCAAAGCTTAACACCAACTCGTGCAGGCTTTTAAAAAGGTTGCTACCAACTCATGTAGGAT
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * ** *
387515 TTTG-AAAGGATGTCACCAACTCATGT-GGCTTTTGAAAAGGTTGCCAACAACTTTTGTGGGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * *
387576 TTTGAAAAGGTTGCTACCAACTAGTGTGGACTTTTGAAAAGGTTCCCACTAACTCATGTGGACC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-C
* * * * * ** *
387640 TTTGAAAAGGTTGCTACCAACTCGCGTGAGCTTTGGAAAAGGTTTCCAAAAACTTGTGTGGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * *
387703 TTTGAAAAGGTTGCCACCAACTCGTGTGTGATTTTGAAAAGTTTTCCACCAACTCATGTGGGAT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * * *
387767 TTTGAAAAGGTTACCACCAACTCATATGGGCCTTTGAAAAGGTTGCTACCAACTCATGTGGGAT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * * * *
387831 TTTGAAATA-GTTGCCACCAACTCTTCTAGACTTTTGAAAAGGTTGTCACCAACCCATATGGAC
1 TTTGAAA-AGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * *
387894 TTTGAAATGGTTGTCACTAATTCGTGTGGGCTTTTGGGCTTTTGAAAAGGTTGCCACCAACTCTT
1 TTTGAAAAGGTTGCCACCAACTC--GT--G----TGGGCTTTTGAAAAGGTTGCCACCAACTCGT
*
387959 GTGAAC
58 GTGGAC
* ** * * * * * *
387965 TTTTG-AAAGGTTGGCATTAACTCGTGTGGACTTTT--ATA-GTTACCACTAACTTGTGTGGAAT
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGG-AC
* * * * * * * * *
388026 TTTGAAAAGGTTGTCACCGACTCCTATGAGCTCTTGAAAAGGTTGTCACCAACTCATGTGGCC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * *
388089 TTTTGCAAAGGTTGCCACCAACTCATGTGGGCTTTTGAAATGGTTACCACCAACTCGTGTGGGTC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
** ** * * * * * *
388154 TTTG-AAAGGTTGTTACCAACTCGTGTCAGATTTTGAAAAGGTTACGACCAAATCGAGTGGGAT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * * *
388217 TTTGGACAA-GTTGCCACCAACTTGTGTGGGATTTTAAAAAAGCTGCCACCAACTTGTGTGGAC
1 TTT-GAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * * * *
388280 GTTGAAAAGGTTGTCACTAACTCGTGTGGACTTTTGAAAAAGCTT-CTAACAACTTGTGTAGAG
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTG-AAAAGGTTGCCACCAACTCGTGTGGAC
* * * * *
388343 TTTGAAAAGTTTGTCACCAACTC-TAT-GG-TTTTGACAAAGGTTGCTACCAACTCGTGTGTGAT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGA-AAAGGTTGCCACCAACTCGTGTG-GAC
* * * * *
388405 TTTGAAAAGGTTACCACCAACTCGTGTGGGATTTTGAAAAGGTTGCTAACAACTTGTGTGGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * *
388468 TTTGAAAAGGTTGTCACCAACTCGTCTAGGCTTTTGAAAAGGTTGCCACCAATTCTTCTAGACC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-C
* * *
388532 TTTGAAAAGGTTGCCACCAACTC-TGTGGAC-TTTGAAATGGTTGCCACCAATTCGTAGGGGCTT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGT----G---
*
388595 TTGGGC
59 -TGGAC
* * ** * ** *
388601 TTTTGAAAAAGTTGCCACCAACTCGTGTGGACTTTTG-AACTGTTGGCATGAACTCGTGTAGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* **
388664 TTTGAAATA-GTTACCACCAACTCGTGTGGATTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
1 TTTGAAA-AGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
** * * * ** * * *
388727 TTTGACTAGGGTGCCACAAACTCGGGTGAAC-TTTGTAAAGGTTGCCACCAACTCCTGTGGGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * *
388789 TCTTGGAAAGGTTGCCACCAACTCCTGTGGACTTTTGCAAAGGTTGCCACCAACTCATGTGGGC
1 T-TTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * *
388853 TTTTGAAATGGTTACTACCAACTCGTGTGGGCCTTTGAAAAGGTTGCTACCAACTCATGTTAGAT
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTG-TGGAC
* * * * * *
388918 TTTGAAAAGAG-CGCCACCAACTC------G--ATTAAAAAGGTTGCCACCAATTTGTGT-AAGC
1 TTTGAAAAG-GTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-C
* * * * * * * * **
388973 TTTTGAAAAAGTTTCCAACAACTTGTGTGGAC-TTTGAAGAGGTTGTCACCAACTC-TATGGGTT
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * * *
389036 TTTGAAAAGGTTGCAACCAACTCATGTGCGATTTTCAAAAGGTTACCACCAACTCGTGTGGGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * *** * *
389099 TTTTGAAAAGGTTGCCAACAACGT-GTGTTGAC-TTTGAAAATGTTATTACTAACTCATGTAGG-
1 -TTTGAAAAGGTTGCCACCAAC-TCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGA
389161 C
63 C
* * *
389162 TTTTGAAAAGCTTGCTACCAACTCGTGTGGGCTTTTGGGCTTTTAAAAAGGTTGTCACCAACTCG
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTT--G------AAAAGGTTGCCACCAACTCG
*
389227 TGTGAAC
57 TGTGGAC
* * * ** * * *
389234 TTTAAAAAGGTTGCCATCAACTCATGTGGGCTTTAAAAAAGGCTGCCACCAAATCGTGTGGGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * ** *
389297 TTTTGAAAACGTTGCCATCAACTCATGTGGAC-TTTGAAAAGGTTGCCACCAACTTATGTGAAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * *** ** * *** ** ** *****
389360 TTCTAAAAATGTTG-GACTTTGAAAAGGT-TGCCAACAAATTGTGTGGATTTTGAAAAGTTTTC-
1 TT-TGAAAAGGTTGCCAC---CAACTCGTGTG--GGC---TTTTGAAAAGGTTGCCACCAACTCG
* **
389422 TATCAAC
57 TGTGGAC
** ** * * * *** * * ** *
389429 TCATGTG-GGATTTTG--A-AAAGT-TTGCTACCAACTCATATG-AGATTTTG--A--AA--AG-
1 T--T-TGAAAAGGTTGCCACCAACTCGTG-T--GGGCT--TTTGAAAAGGTTGCCACCAACTCGT
*
389481 GT-TAC
58 GTGGAC
**** ** * *** *** ** ** * * **
389486 CACCAACTCGTGTGGCCTTTTGAAAAAGT-TGCCAACAACTTG-TATGGACTTTG--A--AA-AG
1 TTTGAA-AAG-GTTGCC--ACCAACTCGTGTG--GGC-TTTTGAAAAGG---TTGCCACCAACTC
*
389544 GTTGCTAGCAAC
56 G-TG-T-G-GAC
* *** ** * * * ** * * *
389556 TCGTGTGGACTTTG--A-AAAGGTTGCCATGAACTTTTGTAGACTTTTGAAAAAGTTACCGCCAA
1 T-TTGAAAAGGTTGCCACCAA--CT--CGTG---TGG----G-CTTTTGAAAAGGTTGCCACCAA
* *
389618 TTCGTGTGAAC
53 CTCGTGTGGAC
* * * * * *
389629 TTTGAAATGGTTACCACCAATTCATGTGAGCTTTTAGGCTTTTGAAAAGTTTGCCACCAACTCTT
1 TTTGAAAAGGTTGCCACCAACTC--GT--G----TGGGCTTTTGAAAAGGTTGCCACCAACTCGT
*
389694 GCGGAC
58 GTGGAC
* * ** * * * *** * *
389700 TTTTG-AAGGGTTGCTATTAACTTGTGTGGAC-TTTGAAATA-GTTGCC-CTTAACAATTTTGGG
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAA-AGGTTGCCAC-CAACTCGTGTGGA
389761 C
63 C
* * * * *
389762 TTTTTAAAAGGTTGCCACCAACTCATGTGGGC-TTTGAAAAGGTTACCCCCAACTTGTGTGGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
*** * * * * * * * * **
389825 TTTGAAAAGGTTGCTTTCAACCCTTGTGGGCATTTAAAAAGGCTACCAACAACTAGTACAGG-C
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGT-GTGGAC
** ** * * * * * * * *
389888 TTTTGAAAAAATTGCCACCAACTTATGCGGAC-TTTGAAATGGTTTCCACTAACTTGTATGGGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * *
389951 TTTGAAAAGGTTGCCACCAACTCATGTGGAC-TTTGAAAAGGTTGCCATCAACTCATGTGTG-C
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTG-GAC
* * * * * * ** *
390013 TTTTAAAAAGGTTGCTACCATCTCATGT-GGCTTTTGAAAATGTTACCAATAACTCGTGTGGGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * **** * * *
390076 TTTCGAAAATGTTGCCACAAACTCGTGT-AAAATTTGAAAAAGGTTTCCACCAACTCATCTGCG-
1 TTT-GAAAAGGTTGCCACCAACTCGTGTGGGCTTTTG-AAAAGGTTGCCACCAACTCGTGTG-GA
390139 C
63 C
* * ** * * *
390140 TTTTAAAAAGGATGCCACCAACTCGTGTGGATTTTTGAAAAAGTTACCACCAACTCGTGTGGGCC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * ** * * * * * *
390205 TTTGAAAAGGTTGCTACCAATTTATGTGGGATTTTAAAAAAGTTACCACCAACTCATGTGAGAT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTG-GAC
* * * * * * * ** * *
390269 TTTGAAAGGGTTGTCAACAACTTGTGTGGAC-TTTAAAAAGGTTGCCACCTACTAATATGGGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
** * * * * * ** *
390331 TTTTGAAAAGGTTGCCATTAACTCTTCTAGACTTTTGAAAAGGTTGCCACCAACTCTTACGAAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * ** * *
390395 TTTTG-AAAGGTTGCCATCAACTCGTGTGGAC-CTTGAAAAAGTTGCCCCCAACTCACGTGAATT
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-C
* * * * * * *
390458 TTTTATAAGGTTGCCCCCAACTCGTGTGGACTTTTGAAAAGGCTCCCACCAACTTC-TGT-CAGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAAC-TCGTGTGGA-C
* * * * *
390521 ATTTGAAAAGGTTGTCGA-CAACTCGTTTGAGC-TTTGAAAAGGTT-CTCACCAACTCATGTGGC
1 -TTTGAAAAGGTTG-CCACCAACTCGTGTGGGCTTTTGAAAAGGTTGC-CACCAACTCGTGTGGA
390583 C
63 C
* * * * ** ** * *
390584 ATTTGCAAAGCTTACGACCAACTCGTGTAAGCTTTTGAAAAAATTGCTACCAACTCGTGTGAGAT
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTG-GAC
* * * * *
390649 TTTG-AAAGGTTGCCACCAACTCGTGTGGGATTCTGAAAATGTTGCCACCAACTCATGTGGGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * *
390711 TATTGAAATA-GTTGCCAACAACTTGTGTAGAC-TTTGAAAAGGTTGTCACCAACTCGTGTGGGA
1 T-TTGAAA-AGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGA
*
390774 T
63 C
* * * * *
390775 TTTGAAAA-GTTTCCTACCAATTCGTGTGGGATTTTGAAAAGGTTACCACCAACTCGTGTGGCC
1 TTTGAAAAGGTTGCC-ACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * *
390838 TTTTGAAAAGGTTGCCGA-CAACTTGTATAGAC-ATT-AAAATGATTGCCACCAACTCATGTGGG
1 -TTTGAAAAGGTTGCC-ACCAACTCGTGTGGGCTTTTGAAAA-GGTTGCCACCAACTCGTGTGGA
390900 C
63 C
* * ** ** * * * * *
390901 TATTGAAATGGTTTCCAATAACTTATGTGGAC-TTTGAAAAGGCTGTCACCAACTCATGTGGGAT
1 T-TTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * *
390965 TTTGAAAA-GTTTCCTACCAACTCGTGTGGGATTTTGAAAAGGTTACCACCAACTCGTGTGGCC
1 TTTGAAAAGGTTGCC-ACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * *
391028 TTTTGAAAAGGTTGCCAACAACTTGTATGGAC-ATTAAAAAGGTTGCCACCAACTCATGTGGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * *
391091 TTT-AAAATAGTTGCCACCAACCAGTGCGGGCTTTTGGGCTTTTGAAAAGTTTGCCACTAACTCT
1 TTTGAAAA-GGTTGCCACCAA-C--T-C--G--TGTGGGCTTTTGAAAAGGTTGCCACCAACTCG
391155 TGTGGAC
57 TGTGGAC
* * * *
391162 TTTTG-AAAGGTTGCTATCAACTCATGTGGAC-TTTGAAATA-GTTGCCACCAACCAGTGCGGGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAA-AGGTTGCCACCAA-C--T-C--G-
* *
391224 TTTTGGGC
57 -TGTGGAC
* * * * * *
391232 TTTTGAAAAGTTTGCCACTAACTCTTGTGGACTTTTG-AAAGGTTGCTATCAACTCGTGTGGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * *
391295 TTTGAAATGGTTGCCACCAACTCGTGTGAGCCTTTAAAAAGGTTACCACCAGCTCATAT-GAGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-C
* ** * * * *
391358 TTTTGAAAAAGTTTTCACCAACTCGTGTGGAC-ATTGAAAAGGTTGCCACCAACTAGTTTAGG-C
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * *
391421 TTTTTAAAATGG-TGCCAACAACTCGTGT-GGATTATGAAAAGGTTGCCACAAACTCATGTTGG-
1 -TTTGAAAA-GGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTG-TGGA
391483 C
63 C
* * * ** *
391484 TTTGAAAAGCTTGCC-TCAACTCGTGTGGGC-TTTGAAAAGATTGCTTCCAACTCGTGTGAAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * * *
391545 TTT-AAAAGGTTACAATCAACTCGTGTGAGCTTTTAAAAAGGCTGCCAACAACTCATGTGGGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * ** * * * * *
391607 ATTTGAAAAGATTGGCACCAAC-C-TATGTGGAATTTGAAAAGATAGCCACAAACTTGTGTGGGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTG-GGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * *** * * * * *
391670 TTGGAAAAGGCTATTACCATCTCATGTGGGC-TTTGAAAGGGTTGCCATCAACTTGTGTGGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * *** * * *
391732 ATTGAAATGGTTGCCACCAACTAGTTTAAACTTTTTAAAAGGTTGCCACCAACTTGTGTAGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * **
391795 TTTGAAAAGGCTGCCACAAACTCGTGTTGGC-TTTGAAAAGGCT-ACTGCAACTCGTGTAGG-C
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * *** * * * * *
391856 TTTGAAAAGATTGCCTCCAACTCGTGTAAAC-TTTGAAAAAGTTGTCATCAACTCATGTGGGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * *
391918 TTTCAAAAAGGCTGCCAACC-ACTCGTCTGGGCTTTTAAAAAGATTGCGACCAACTCATGTGGAC
1 TTT-GAAAAGGTTGCC-ACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * *
391982 ATTGAAATGGTTGCCACTAACTTGTGTGGGC-TTGGAAAAGGTTGCCACCAACTCATATGGGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * *
392044 TTTGAAAAGGTTGCCATCAACTCGTGTGGGCTTTTAAAAAGGTTGCCACCAACTCGTGTGGGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * ** ** * * * *
392107 TTTTAAAAAGGTTGCCACCAACTCATGTGGATTTTTGAAAATATTACCACTAACTTGTATGGACC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-C
* * * * * * * * *
392172 TCTCAAAAGGTTACCACCAACTCATGTGGAC-TTTGAAATGGTTGCCACTAACTTGTGTGGGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* ** * *** *
392234 TTTGAAAAGGTTTCCACCAACTTATGTGGAC-TTTGAAAAGGTTATTATCAACTCGTGTAGG-C
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * *
392296 TTTTCAAAAGGCTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCAACAACTCGTGTGGGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * ** * * * * *
392360 TTTCAAAAATGTTTCCACCAA-TGCGTGTGGAC-TTTG-ACTGTGGTGGCACCAACTTGTATAGA
1 TTT-GAAAAGGTTGCCACCAACT-CGTGTGGGCTTTTGAAAAG-GTTGCCACCAACTCGTGTGGA
*
392422 T
63 C
* * * * * *
392423 TTTGAAAAGGTTACCACCAGCTCGTGTGAGCTTTTGAAAAGGTTACCACAAACTCGTGTGAAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * *
392486 TTTGAAATGGTTGCCACCAATTCGTTTGGAC-TTT-AAAATGGTTGCCTCAAACTAGTGTGGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAA-GGTTGCCACCAACTCGTGTGGAC
* * * *** * *
392548 TTTTGAAATGGTTGGCACCAACTCATGTATAC-TTTGAAAATGTTGTCACCAACTCGTGTAGG-C
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * ** * *
392611 TTTAAAAACGTTGCCACCAACTCGAGTGGAC-TCTGAAAAGGTTGTTATCAACTCGTGTGGGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* *** ** * * * * ** *
392673 TTTTAAAATCACTGCCATTAACTCATGTAGAC-TTTGAAAAGGTTGCCCCCAACGAGTGTAGAC
1 TTTGAAAA-GGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * * ** * * * *
392736 TTTTAAAATGATTACCACAAACTTGTGTGGAC-ATTGACAAGGTCACCATCAGCTCATGTGGGC
1 TTTGAAAA-GGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * ** *
392799 TTTTGAAAAGGTTACCACCAACTCGTGCGGGCTTTTGAAATTGTTGCTACCAACTCGTGTGGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * * * *
392863 TTTGACTATGGTT-TCACCAACTTGTATAGAC-TTTGAAAAGGTTACCACCAACTTGTATGG-C
1 TTTGA-AAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * * * *
392924 TTCTGAAAAGGTTGCCACCAATTCCTATTGAC-TTTGACTATGG-TGCCATCAACGT-GTGTAGA
1 TT-TGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGA-AAAGGTTGCCACCAAC-TCGTGTGGA
392986 C
63 C
* * * * * * *
392987 TTTGAAACA-GTTGCCACCAAATCATGTGGGCTTTTAAAAAGGTTGGCACCTACTCGTTTGGATT
1 TTTGAAA-AGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-C
* * * * ** * * * * *
393051 TTTGTAAATGTTACCCCCAACTTATGT-GGATCTTTGAAAAAGTTGCTACCAACTCATGTGGAAT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCT-TTTGAAAAGGTTGCCACCAACTCGTGTGG-AC
* * * * **
393115 TTTAAAAAGGTTGCCACCAACTC-TGGTGGGATTTTGAAAGGGTTGCTACCAACTTATGTGGAC
1 TTTGAAAAGGTTGCCACCAACTCGT-GTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
** * * * * * *
393178 TTACAAAAGGTTGTCACCAATTCGTGTGGGCTTTTGAAAAAGTTTCCAACAACTTGTGTGGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * *
393241 TTTGAAAAGGTTGTCA-CAACTC-TGTGGGTTTTTGAAAATGTTGCTACCAACTCATGTGCGAT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTG-GAC
* * * ** * ** *
393303 TTTGAAAAGGTTGCCACCAACTCGTGTGGAC-TTTGACAATGG-TACCACCAACTTTTATATAT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGA-AAAGGTTGCCACCAACTCGTGTGGAC
* * * * **** *
393365 TTTGAAAAGGTTGCCACCAACTCATGTGAGCTTTTGAAAATGTTAGACTTTGACT-ATGGTGCCA
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTT-GCCACCAACTCGT-GTG---
*
393429 CAAAC
61 --GAC
** * ** * * * * *
393434 TCATGTGAACTTTGGTAGCCACCAACTTATGTGGGCTTTTAAAAATGTTCCCACCAACTCTTGCG
1 T--T-TGAA--AAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTG
*
393499 GATT
61 GA-C
* * * * * * * *
393503 TTTGAAAAGGTTACCACTAAAT-ATGTGGTCCTTTGAAAAGGTTGCTACCAACTCGTGTGGGAT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * * * *
393566 TTTGAAAAGGTTACCACCAACTCGTCTGAGATTTTGAAAAGGTTGCTAGCAACTCTTGTGGGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * *
393629 TTTTGAAAAGGTTGCCAACAACTTGTATGGAC-TTTGAAAAGGTTGTCACCAACTCCTGTAGG-C
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * *
393692 TTTTAAAATGGTTGCCACCAACTCTTGTAGACTTTTGAAAATGTTGCCACCAACTCGTGTGGAC
1 TTTGAAAA-GGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * *
393756 TTTGAAATGGTTGCCACAAATTCATGTAAGCTATTGGGCTTTTTAAAAGCTTGCCACCAATTCTT
1 TTTGAAAAGGTTGCCACCAACTC--GT--G----TGGGCTTTTGAAAAGGTTGCCACCAACTCGT
393821 GTGGAC
58 GTGGAC
* * ** ** ** * *
393827 TTTTG-AAAGGTTGCAATCAACTCGTGTGAAC-TTTGAAATTGTTGCCATTAACTCGTGTAGATT
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-C
* * * * * * * *
393890 TTTGAAAAGGTTGCCACCAACTCGTATGGCCATTTGCAAAGCTTAG-CGCTAACTTC-TATAGG-
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTT-GCCACCAAC-TCGTGT-GGA
393952 C
63 C
* * * * * *
393953 TTTTGAAAAGGTTGCTACCAACTCGTGTGGGATTTTG-AAAGGTTACCACCAACTCATGCAGGAT
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTG-TGGAC
* * ** * * *
394017 TTTGAAAAGGTTGCTACCAACTTGTGTTAGCTTTTGAAAAGGTTGCCAACAATTTGTGTGGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* ** * * * *
394080 TTTGAAAAAGTTATCACCAACTCGTATGGGCTTTTGAAAAGGTTGCGACCAACTC-TCATAGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGT-GTGGAC
* * * * * * * *
394143 TTTTGAAAATGTT-CCTACCAACTCTTGTGGGATTTTAAAAAGTTTGCTACCAACTCATGTAAGA
1 -TTTGAAAAGGTTGCC-ACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGA
*
394207 T
63 C
* * * * * *
394208 TTTGAAAAAGTTACCACCAACTCGTAT-GGCATTTTGAAAAGGTTGCCAACAACTTGTATGGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGC-TTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * ** *
394271 TTTGAAAAGGTTGTCATCAACTCGTGTGGAC-TTTGAAAAGGTTGCCACGAA-TATTTGTAGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACT-CGTGTGGAC
** * *
394333 TTTTGAAAAGGTTAACACCAACTCGTGTGGAC-TTTGAAATGGTTGCCACCAACTCGTGTGGGCT
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTC--GT--G--
*
394397 TTTGGGC
59 --TGGAC
* * * * * * * * *
394404 TTTTGAAAAGTTTGCTACCAACTCTTATGGACTTCT-AAAAGGTTGCTATCAACTCGTGTGGAT
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * ** * * * * *
394467 TTTGAAATGGTTTCCACCAACTCGTGTAAGCCTTTAAAAAGTTTACCACCAAATCGTGT-GAGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-C
* * * * *
394530 TTTTGAAAAGGTTGCCACCAACTCGTGTGGAC-ATTGAAAAGGTTGCCACCAACTAGTTTGGGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* ** * * * * *
394593 TTCTTAAAATCTTACCACCAACTCGTGTGGAC-TTTGAAAAGGTTACCACTAACTCGTGTGGGC
1 TT-TGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * *
394656 TTTGAAAAGGTTGCC-CCAACTCATGTGGAC-TTTGAAAAGGTTGCCATCAACCCGTGTGGGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * ** * *
394717 TTTTAAAAAAGCTGCCAACAACTAGTGCAGGCTTTTGAAAAGATTGCCACCAACTCATGTGGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * ** *
394781 TTTGAAATGGTTGCCACTAACTTGTGTGTTC-TTTGAAAAGGTTGCCACCAACTCATGTGGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * * ** *
394843 ATTGAAAAGGTTACCATCAACTGGTGTGGGCTTTTAAAAATGTTATCATCAACTCGTGTAGG-C
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * *
394906 TTTTAAAAAGGCTGCCACCAACTCGTGTAGGCTTTTGAAAAGGTTGCCAACAACTCATGTGGGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* ** * * * * * ** * *
394970 TTTCAAAAATATTACCACCAACTTGAGTGGAC--TT-CAACTGTAGTGCCACCAAGCT-GTATAG
1 TTT-GAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGT--TGCCACCAA-CTCGTGTGG
395031 AC
62 AC
* * * * * * * * * **** *
395033 TTTGGAAAGGTTGCTACGAAGAT-GTGTGAGCTTCTAAAAATGTTAGACTTTGACT-ATGGTGCC
1 TTTGAAAAGGTTGCCACCAA-CTCGTGTGGGCTTTTGAAAAGGTT-GCCACCAACTCGT-GTG--
*
395096 ACAAAC
61 ---GAC
* * * * * *
395102 TCATGTGAAATTTGAAAAGGTTGCCACCAACTCATGTGAGCTTTTAAAAAGGTTGACTCTAACTC
1 T--T-TG-------AAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTC
* *
395167 ATGTGGATT
56 GTGTGGA-C
* * * * *
395176 TTTGAAAAGGTTACCACTAACT-GTGTGGGCCTTTGAAAAGGTTGCAACCAACTCGTGTAGGAT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * * *
395239 TTTGAAAAAGTTACCACCAACTCATGTGGGATTTTGAAAAGGTTGCCAACAACTCGTGCGGGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * *
395302 ATTTGAAAAGGTTACCAACAACTTGTGTGGAC-TTTGAAAAGGTTGTCACCAACTCATGT-GAGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-C
* * * *** * *
395365 TTTTGAAAAGGTTACCACCAACTCTTCTAAACTTTTGAAAAGGTTGCCACCAACTCATGTAGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * ** *
395429 TTTGAAATGGTTGCCACCAATTCGTGTGGGCTTTTGGGCTTTTGAAAAGGCTGCCATAAACTCTT
1 TTTGAAAAGGTTGCCACCAACTC--GT--G----TGGGCTTTTGAAAAGGTTGCCACCAACTCGT
*
395494 ATGGAC
58 GTGGAC
* * * * * *
395500 TTTTG-AAAGGTTGCCATCAACTCGTGTGGAC-TTTGAAAAAGTTACCACCAACTCGTGTGAATT
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-C
* * * ** * * * *
395563 TTTGAAAAGGTTGCTACCAACTCATGTAGATTTTTGAAAAGGTTCCCACCAACTCCTAT-CAGC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-C
* * * * * *
395626 TTTTACAAGGTTGCCGA-CAACTCGTTTGGGCTTTGGAAAAGGTTGCCACCAATTCCTGT-GACC
1 TTTGAAAAGGTTGCC-ACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGA-C
* * * * * * * * * * *
395689 ATTTGCAAAGCTTACCACCAACTTGTGTAGGCTTTTGAAAAGATTGCTACTACCTCATGTGGGAT
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGT-GGAC
* * * * * * * *
395754 TTTG-AAAGGTTGCCTCCAACTCATATGGGATTTTGAAAATGTTGCCACCGACTCGTATAGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* ** * * * * * * *
395816 TTTTAAAAAGGTTGCCAATAACTTGTAT-AGATTTTAAAAAGGTTGTCACCAACTCGTGTAGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* ** * * * *
395879 TTTGAAAAGGTTGCCACTAACTTTTGTAGACTTTTG-AAAGGTTGCCACCAACTTGTGTGGCC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * *
395941 TTTTGAAAAGGTTGCCAACAACTTGTATGGGC-TTTAAAAAGGTTGTCACCAACTCATGTGGAC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* ** ** * *
396004 TTTGAAAAGGTTGCCACTAACTTTTGCAGACTTTTGAAAAGGTTACCACCAACTCGTGTGGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* *
396067 TTTGAAATGGTTGCCACCAACTCATGTAGGCTTTTGGGCTTTT-AAATA-GTTACACACCAACTC
1 TTTGAAAAGGTTGCCACCAACTC--GT--G----TGGGCTTTTGAAA-AGGTTGC-CACCAACTC
*
396130 TTGTGGAC
56 GTGTGGAC
* * ** * * * * *
396138 TTTTG-AAAGGCTGCTATTAACTCGTGTGGAC-TTT-AAAATGGTTGCTACCAACTCATGTAAGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAA-GGTTGCCACCAACTCGTGT-GGA
396200 C
63 C
* * * * *
396201 TTT-ATAAAGGTTACCACCAACTCATATGAGCTTTTGAAAAGTTTGCCACCAACTCGTGTGGAC
1 TTTGA-AAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * *
396264 ATTGAAAAGGTTGCCACCAACTAGTTTAGGCTTTTTAAAAGGTTAG-CACCAACTCGTATGGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTT-GCCACCAACTCGTGTGGAC
* * * * * * * *
396327 TTTAAAAAGGTTGTCACAAACTTGTGTTGG-ATTTGAAAAGGTTACC-CCAACTCGTGTAGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * *
396388 TTTGAAAAGGTTGCCATCAACTCGTGTGGGCTTTTAAAAAGGCTGCCAACAACTTGTGTGGTC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* ** * * * * *
396451 TTTTGAAAAGATTGCCACCAACTCACGTGGAC-TTTGAAATGGTTGCCACTAACTTGTGTGGGC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * **
396514 TTGGAAAAGGTTGCCCCCAACTCATGTGGAC-TTTGAAAAAGTTGCCATTAACTCGTGTGGAC
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
* * * * * *
396576 TTTGAAATGGTTGCCACTAACTCGTGTAGGCTTTTGGGCCTTTGAAAAGTTTACCACCAACTCTT
1 TTTGAAAAGGTTGCCACCAACTC--GT--G----TGGGCTTTTGAAAAGGTTGCCACCAACTCGT
*
396641 ATGGAC
58 GTGGAC
* * * * * *
396647 TTTTG-AAAGGTTGCTATCAACTCGTGTTGAC-TTTGAAATGGTTGCCACCAACTCGTGTGAGCC
1 -TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTG-GAC
* * ** * * * *
396710 TTTAAAAAGGTTACCATAAACTCGTGT-TGATATTGAAAAGGTTGCGACCAACT
1 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACT
396763 AGTTTAGGCT
Statistics
Matches: 31269, Mismatches: 9050, Indels: 4561
0.70 0.20 0.10
Matches are distributed among these distances:
44 2 0.00
46 1 0.00
47 2 0.00
48 5 0.00
49 3 0.00
50 5 0.00
51 5 0.00
53 3 0.00
54 15 0.00
55 86 0.00
56 80 0.00
57 45 0.00
58 16 0.00
59 139 0.00
60 153 0.00
61 637 0.02
62 4716 0.15
63 12523 0.40
64 9106 0.29
65 555 0.02
66 123 0.00
67 116 0.00
68 30 0.00
69 118 0.00
70 249 0.01
71 1619 0.05
72 367 0.01
73 59 0.00
74 61 0.00
75 36 0.00
76 48 0.00
77 33 0.00
78 71 0.00
79 211 0.01
80 7 0.00
81 6 0.00
82 2 0.00
83 2 0.00
84 2 0.00
85 3 0.00
87 5 0.00
88 2 0.00
90 2 0.00
ACGTcount: A:0.28, C:0.19, G:0.22, T:0.31
Consensus pattern (63 bp):
TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC
Found at i:354651 original size:166 final size:167
Alignment explanation
Indices: 354352--354797 Score: 384
Period size: 166 Copynumber: 2.7 Consensus size: 167
354342 TCGTGCGGGA
* * *
354352 TTTTGAAAAGGTTGCCACCAACACATGTGGGCTTTTGAAAAGGTTGCCAACAACTTCTGTGGACT
1 TTTTGAAAAGGTTGACACCAACACATATGGACTTTTGAAAAGGTTGCCAACAACTTCTGTGGACT
** * * * *
354417 TTGAAAAAGTTGTCACCAACTCGTGTGGGCTTTTGAAGAGGTTGCCACCAACTCTTACAGACTTT
66 TTGAAAAAGTTACCACCAACTCATGTGGACTTTTGAAAAGGTTGCCACCAACTCGTACAGACTTT
354482 TGAAAAGGTATCCACCTACTTATGTGGGCTTTTGGGC
131 TGAAAAGGTATCCACCTACTTATGTGGGCTTTTGGGC
* * * * **
354519 TTTTGAAAAGGTTGACACCAACTCTTATGGACTTTTGAATA-GTTGCTATTAAC-TCATGTGGAC
1 TTTTGAAAAGGTTGACACCAACACATATGGACTTTTGAAAAGGTTGCCAACAACTTC-TGTGGAC
** * * *** *
354582 TTTGAAATGGTTACCACCAATTCATGTGGATTTTTGAAAAGGTTGCCACCAACTCGTGTGGATTT
65 TTTGAAAAAGTTACCACCAACTCATGTGGACTTTTGAAAAGGTTGCCACCAACTCGTACAGACTT
* * *
354647 TTGAAAAGGT-TGCCACC-A---A-CT---CCTATGGGC
130 TTGAAAAGGTAT-CCACCTACTTATGTGGGCTTTTGGGC
* * * * * * * *
354677 TTTTAAAAAGGTTGCCAACAACTCATTTGGGC-TTTCAAAAGGTTGCCACCAAC-TCGTGTGGAC
1 TTTTGAAAAGGTTGACACCAACACATATGGACTTTTGAAAAGGTTGCCAACAACTTC-TGTGGAC
* * * *
354740 ATTTG-TAAAGCTTACCACCAACTCGTGGGGGA-TTTTG-AAAGGTTGCCAGCAACTCGTA
65 -TTTGAAAAAG-TTACCACCAACTCAT-GTGGACTTTTGAAAAGGTTGCCACCAACTCGTA
354798 TGGGATTTTG
Statistics
Matches: 227, Mismatches: 46, Indels: 21
0.77 0.16 0.07
Matches are distributed among these distances:
157 6 0.03
158 72 0.32
159 22 0.10
160 4 0.02
161 1 0.00
162 1 0.00
165 4 0.02
166 82 0.36
167 35 0.15
ACGTcount: A:0.27, C:0.20, G:0.22, T:0.31
Consensus pattern (167 bp):
TTTTGAAAAGGTTGACACCAACACATATGGACTTTTGAAAAGGTTGCCAACAACTTCTGTGGACT
TTGAAAAAGTTACCACCAACTCATGTGGACTTTTGAAAAGGTTGCCACCAACTCGTACAGACTTT
TGAAAAGGTATCCACCTACTTATGTGGGCTTTTGGGC
Found at i:355140 original size:71 final size:71
Alignment explanation
Indices: 355024--355156 Score: 187
Period size: 71 Copynumber: 1.9 Consensus size: 71
355014 CTCTTGTAGA
*
355024 CTTTTGAAAAAGTTTCCACCAACTCGTGTAGACTTTAAAATGGTTGCCACCAACTCGTGTGGGCA
1 CTTTTGAAAAAGTTACCACCAACTCGTGTAGACTTTAAAATGGTTGCCACCAACTCGTGTGGGCA
355089 TTTGAG
66 TTTGAG
* * * * * *
355095 CTTTTGAAAAGGTTACCACCAACTCTTTTAGGCTTTTGAAA-GGTTGCCATCAACTCGTGTGG
1 CTTTTGAAAAAGTTACCACCAACTCGTGTAGAC-TTTAAAATGGTTGCCACCAACTCGTGTGG
355157 ACTTTGAAAT
Statistics
Matches: 54, Mismatches: 7, Indels: 2
0.86 0.11 0.03
Matches are distributed among these distances:
71 48 0.89
72 6 0.11
ACGTcount: A:0.26, C:0.21, G:0.21, T:0.32
Consensus pattern (71 bp):
CTTTTGAAAAAGTTACCACCAACTCGTGTAGACTTTAAAATGGTTGCCACCAACTCGTGTGGGCA
TTTGAG
Found at i:355149 original size:31 final size:30
Alignment explanation
Indices: 355094--396762 Score: 4583
Period size: 32 Copynumber: 1313.8 Consensus size: 30
355084 GGGCATTTGA
* * *
355094 GCTTTTGAAAAGGTTACCACCAACTCTTTTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
*
355126 GCTTTTGAAAGGTTGCCATCAACTCGTGTG
1 GCTTTTGAAAGGTTGCCACCAACTCGTGTG
*
355156 GAC-TTTGAAATGGTTGCCACCAACTAGTGTG
1 G-CTTTTGAAA-GGTTGCCACCAACTCGTGTG
* * * *
355187 GAC-ATTGAAAGGGTTGCCACCAATTAGTTTG
1 G-CTTTTGAAA-GGTTGCCACCAACTCGTGTG
* * *
355218 TGCTTTTAAAAAGGTTGCCAGCAGCTCGTGTG
1 -GCTTTT-GAAAGGTTGCCACCAACTCGTGTG
* * * *
355250 GAC-TTTGAAAAGTTTGCCACTAACTCATAGGG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGT-GTG
* * *** *
355282 GC-TTTGAAAAAGTTACCTTTAACTTGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
** * * **
355312 GAATTTGAAAAGGTTGCTATCAACTTATGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* ** *
355343 GCCTTTTAAAAAGGCAGCCAACAACTCGTGTGG
1 G-CTTTT-GAAAGGTTGCCACCAACTCGTGT-G
* *
355376 GCTTTTGAAAGATTGCCACCAACTCATGTG
1 GCTTTTGAAAGGTTGCCACCAACTCGTGTG
* *
355406 GAC-TTTGAAAAGGTTGCCACTAACTCGTATGG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
355438 GC-TTTGAAAAGGTTACCACCAACTCCTATG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
355468 GAC-TTTGAAAAGGTTGCTATCAACTCGTGTAG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *** *
355500 GTTTTTAAAAGGGCAACCACCAACTCGTATGG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* *
355532 GCTTTTGAAAAGGTTTCCACCAACTCATGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * **
355564 GCTTTCGAAA-ATAATACCACCAAGGCGTGTG
1 GCTTTTGAAAGGT--TGCCACCAACTCGTGTG
* *
355595 GAC-TTTGACTATAGG--GCCACCAACTTGTATAG
1 G-CTTTTGA--A-AGGTTGCCACCAACTCGTGT-G
* ** ** *
355627 AC-TTTGAAAATATTGCCACCTGCTCGTATG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
*
355657 AGCATTTGAAAAGGTTAG-CACCAACTCGTGTG
1 -GCTTTTG-AAAGGTT-GCCACCAACTCGTGTG
* * *
355689 AAC-TTTGAAATGGTTGCCTCCAACTAGTGTAG
1 -GCTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* *
355721 ACTTTTGAAATGGTTGCCACCAACTCGTGTAT
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* ** * *
355753 ACTTTAAAAATGTTGCTACCAACTCGTGTTG
1 GCTTTTGAAAGGTTGCCACCAACTCGTG-TG
* ** *
355784 GCTATAAAAAGGTTGCCACCAACTCGTGCG
1 GCTTTTGAAAGGTTGCCACCAACTCGTGTG
* *
355814 GATTTTGAAAAGGTTGCCATCAACTCGTGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
355846 GCTTTTAAAAAGGCTGCCATCAACTCATGTAG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGT-G
* * * *
355878 GCTTTTAAAAAAGTTGCCATCAACTAGTGTG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGTG
* * ** *
355909 GAC-TTTGAAAAAGTTGCCCCCAACGAGTATG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * ** *
355940 GACTTTTGAAAAGATTACCATAAACTTGTGTG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
355972 GAC-ATTGACAAGGTTGCCACTAACTCGTGTGG
1 G-CTTTTGA-AAGGTTGCCACCAACTCGTGT-G
* *
356004 GC-TTTGAAAAAGTTACCACCAACTCGTGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
356035 AC-TTTGAAAAGGTTGCCATCAAGTCATGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
** *
356066 GCATTTAAAAAGGCTGCCACCAACTCGTGTGG
1 GC-TTTTGAAAGGTTGCCACCAACTCGTGT-G
* * * ** *
356098 GCTTTTAAAAAAGTTACCACCATTTCGTGAGG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTG-TG
* ** *
356130 GCTTTTAAAAATTTTGCC-CTCAACTTGTGTG
1 GCTTTT-GAAAGGTTGCCAC-CAACTCGTGTG
* * *
356161 GAC-TTTGAATATGG-TGCCACCAACTTGTATAT
1 G-CTTTTGAA-A-GGTTGCCACCAACTCGTGT-G
* * ** *
356193 AC-TTTGAAAAGGTTACCACCAACTTATGAAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTG-TG
* * * *
356224 GCTTCTGGAAAAGTTGCCACCTACTCGTATG
1 GCTT-TTGAAAGGTTGCCACCAACTCGTGTG
* *
356255 GAC-TTTGACTATAGG--GCAATCAACTCGTGTAG
1 G-CTTTTGA--A-AGGTTGCCACCAACTCGTGT-G
* *
356287 AC-TTTGAAAAGGTTGCCACCAACTTGTGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * * * *
356318 AC-TTCGAAAAGTTTACCACCAACTCTTATAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
*
356349 G-TTATTGAAAAGGTTGCCACCAACTCATGTG
1 GCTT-TTG-AAAGGTTGCCACCAACTCGTGTG
** * * * * *
356380 GACTTTAAAAAAGTTTCCACCAATTCGGGTAA
1 G-CTTTTGAAAGGTTGCCACCAACTCGTGT-G
* *
356412 GCTTTTGAAAAGGTTACCACCAACTTGTGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
356444 CCTTCTGAAAAGGTTACCACCAACTCATGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * *
356475 GAC-TATGACTATGTTGCC-CCAAACTTGTGTG
1 G-CTTTTGA-AAGGTTGCCACC-AACTCGTGTG
*
356506 AAC-TTTGAAAAGGTTGCCACCAACTCGTGTG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
*
356537 AGTTTTTGAAAAGGTTGCCACCAACTCGTGTG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
356569 GACTTTTTAAACGGTTGCCAACAAATCTCGTG-G
1 G-CTTTTGAAA-GGTTGCC-ACCAA-CTCGTGTG
356602 GC-TTTGAAAAGGTTGCCACCAACTCGTGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * * *
356633 GCTTTTAAAAAGGTTACCACAAACTCATGTAA
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGT-G
* * *
356665 GCCTTTGAAATGGTTGCTACCAACACGTGTG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGTG
* * * *
356696 GAATTTTAAAAAGGTTACCACCAACTCGTGCG
1 G-CTTTT-GAAAGGTTGCCACCAACTCGTGTG
** * * * *
356728 AAATTTTGAAAAAGTTGTCACTAACTTGTGTGG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
356761 GCTTTTGAAAAGGTTACCACCAACTCTTGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
356793 ACTTTTCAAAAGGTTGCCACCAACTCGTGTG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGTG
* * * ** *
356824 GATATTGAAATAGTTGCTTCCAACTCGTTTGG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGT-G
*
356856 GCTTTTGAAAAGGTTGCCACCAACTCCTGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * ***
356888 ACTTTTGAAAGGTTTCTGTCAACTCGTGTAG
1 GCTTTTGAAAGGTTGCCACCAACTCGTGT-G
* *
356919 AC-TTTGAAATGGTTGCCAGCAACTCGTGTGG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* *
356950 GCTTTTGAAAAGGTTACCACCAACAT-ATGTAG
1 GCTTTTG-AAAGGTTGCCACCAAC-TCGTGT-G
* * *
356982 GCTTTTGAAAAGGTTACTACCAACTCATGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
357014 AC-TTT-AACTATAG-TGCCACAAACTCGTGTG
1 GCTTTTGAA--A-GGTTGCCACCAACTCGTGTG
* * *
357044 AAC-TTTGAAAAGGTTACCACCAACTCGCGTGG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
357076 GCTTTTAAAATGGTTACCACCAACTCGTGTGG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* * * *
357108 GATTTTGTAAAAGTTACCATCAACTCGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
357139 AGCTTTTAAAAATGTTGCCAACAACTCGTGTAG
1 -GCTTTT-GAAAGGTTGCCACCAACTCGTGT-G
*
357172 G-ATTTGAAAAGGTTGCCACCAACTCGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * *
357202 AACTTTTGAAAATGTTGCCAACAACTTGTGTG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
** **
357234 GAC-TTTGAAAAGGTTGTTACCAACTTATGTG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * * *
357265 AGCTTTGGAAAATGTTGCTACCAACTCATATGG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
357298 GATTTTGAAAAGGTTGTCACCAACTTGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * **
357329 AGCTTTTGAAAAGGTTGCCAACAATTTATGTG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
*
357361 GAC-TTTGAAAAGGTTGTCACCAACTCGTGTGG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
357393 GCTTTTGAAAAGGTTGCCACCAACACTTGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * ** **
357425 ACTTTTGAAAATGTTATCACCAACTCGTGCAA
1 GCTTTTG-AAAGGTTGCCACCAACTCGTG-TG
* * *
357457 AC-TATGAAATGGTTGCCTCCAACTTCTGTGGGCTTTTG
1 GCTTTTGAAA-GGTTGCCACCAAC-TC-GT--G----TG
* *
357495 GACTTTTGAAAAGGTTGCCACCATCTCATGTG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * *
357527 GAC-TTTGAAAAGGTTGACAGCAACTCATATG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * * * * *
357558 GTCTTTTAAAAAAGCTGCGACCAATTCGTTTTT
1 G-CTTTT-GAAAGGTTGCCACCAACTCG-TGTG
* * * *
357591 GCATTTGTAAAGATTGCTACCAACTCATGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
*
357623 GCTTTTGAAAATGTTGCCACCAACTCGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
***
357654 GAC-TTTGACTTTGTTGCCACCAACTCGTGTG
1 G-CTTTTGA-AAGGTTGCCACCAACTCGTGTG
* * * * *
357685 TAC-TTTGACTATGG-TGCCACTAACTTGTATAG
1 -GCTTTTGA--AAGGTTGCCACCAACTCGTGT-G
* ** * * * *
357717 ACTTTAAAAAAGTTTCCAGCAACTCGTGTCA
1 GCTTTTGAAAGGTTGCCACCAACTCGTGT-G
* **
357748 GCTTTTGAAA-ATATTACACCCAACTCGTGTG
1 GCTTTTGAAAGGT-TGCCA-CCAACTCGTGTG
* ** *
357779 GAC-TTTGACTATGG-TGCCATAAACTCGTGTAA
1 G-CTTTTGA--AAGGTTGCCACCAACTCGTGT-G
* *
357811 AC-TTTGTAAAGGTTGCCACCAACTCCTGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
** * *
357842 GCTTTTGAAAAGGTTGCCAAAAACTTGTTTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
** * *
357874 GC-TTTGAAAATCTTGCCACCAATTCATGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
357904 GATTTTTGTAAAGGGTGCCAACAACTCGTGTG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
*
357936 TGCTTTTGAAAAGGTTACCACCAACTCGTGTCG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * **
357969 ACCTTGGAAAAGGTTGTTACCAACTCGTGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * ** *
358001 GATTTTGAAATAG-TGTTACCAACTCGAGTGG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* * *
358032 GAC-TTTAAAAGGGTTGCCACTAACTCGTTTGG
1 G-CTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* *
358064 GCTTTTGAAAAGGTTGCCAACAACTTGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* ** * *
358095 GATTTTGAAAAGGTTGTTACCAACCCGTCTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * * *
358127 GCATTTGAAAAAGTTTCCAACAACTTGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
** * *
358158 GAC-TTTGAAAAGGTTATCACCAACACTGTATG
1 G-CTTTTG-AAAGGTTGCCACCAACTC-GTGTG
** * * *
358190 TTTTTTAAAAGATTGCCACCAACTCATGTG
1 GCTTTTGAAAGGTTGCCACCAACTCGTGTG
* *
358220 CGATTTTGAAAAGGTTTCCACCAACTCGTGTGG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * **
358253 GCTTTTGAAAATGTTGCCAACAACTTATGTTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTG-TG
* * *** * *
358285 AC-TTCGAAAAGGTTATTACTAACTCGCGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
358316 ACTTTTGAAAAGGTTGCCACCAACTC-TCGCAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGT-G-TG
* * *
358348 ACTTTTGAAAAGGTTACCACCAATTCGTATGAATTTTTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCG--TG------T-G
358388 GCTTTTGAAAAGGTTGCCACCAACAT-GTGTG
1 GCTTTTG-AAAGGTTGCCACCAAC-TCGTGTG
* *
358419 GAC-TTTGAAAAGGTTGCGATCAA-TGCGTGTGG
1 G-CTTTTG-AAAGGTTGCCACCAACT-CGTGT-G
** * * *
358451 GCTTTAAATAAGGCTGCTACCAACTCGCGTGG
1 GCTTTTGA-AAGGTTGCCACCAACTCGTGT-G
* * *
358483 GCTTTTGAAATGGTTCCCATCAACTCATGTAG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* * * * *
358515 GCATTTGAAAATGTTACCACGATCTCGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* ** *
358546 GAC-TTTGACTATGG-TGCCACCAACTTTTATAG
1 G-CTTTTGA--AAGGTTGCCACCAACTCGTGT-G
* * **
358578 AC-TTTGAAAAAGTTGCCACCAACTAATGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * **** *
358608 AGCTTCTGAAAATGTTAGACTTTGACT-ATG-G
1 -GCTTTTG-AAAGGTT-GCCACCAACTCGTGTG
* ** * **** * **
358639 TGC---TAAAAACTCG-TGTGAACT-TTGAA
1 -GCTTTTGAAAGGTTGCCACCAACTCGTGTG
**** * **
358665 AAGGTT-ACCA-----CCAACTC-A-T-GTGGA
1 GCTTTTGA-AAGGTTGCC-AC-CAACTCGTGTG
** ** **
358689 CTTTTAAAATA-GTTGCCACCAACTTATGTAG
1 GCTTTTGAA-AGGTTGCCACCAACTCGTGT-G
** ** *
358720 ATTTTTGAAAATATTACCACCAACTCGTGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
358752 GCCTTTGAAAAGGTTGCTAGCAACTCATGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * * *
358784 GCTTTTAAAAATGTTGCCACTAACTCATGTAT
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGT-G
** * ** *
358816 ATTTTTAAAAATATTACCACCAACTCGTGTG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGTG
* * *
358847 AGCCTTTGAAAAGGTTGCTACTAACTCGTGTAG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
358880 GATTTTGAAAAGGTTCCCACCAACTCGAGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
358912 GATTTTGAAAAGGTTACCACCAACTCGTGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
358944 GCTTGTGAAAAGGTTGCCAACAACTTGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * *
358975 GATTTTGAAAAGGTTGTCACTAACTCGGGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
** *
359007 GCTTTTGAAAAGGTTGCCACCAACTATTATAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
** * * *
359039 AATTTTAAAAAGGTTACCACTAACTCGTGTG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGTG
* *
359070 GAC-TTTGAAATGGTTACCACCAATTCGTGTGAGCTTTTAG
1 G-CTTTTGAAA-GGTTGCCACCAACTC--GT--G----T-G
*
359110 GCTTTTGAAAAGGTTGCCACCAACTCTTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * *
359141 GACTTTTGAAAGGTTGCCATCAATTCCTATG
1 G-CTTTTGAAAGGTTGCCACCAACTCGTGTG
*
359172 GAC-TTTGAAATAGTTGCCACCAACTCGTGTAG
1 G-CTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* *
359204 AG-TTTTGAAAAAGTTGCTACCAACTCGTGTGG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
359236 GTTTTTGAAAAGGTTGCCACTAACTCGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
359267 GACTTTTTAAAAGGTTGCCAACAACTCACGTG-G
1 G-C-TTTTGAAAGGTTGCCACCAACT--CGTGTG
*
359300 GC-TTTGAAAAGATTGCCACCAACTCGTGTCG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
359331 ACTTTTGAAAAGGTTACCACAAACTCATGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * * *
359363 GCCTTTGAAAAAGTTGCTACCAACACGTGCGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTG-TG
* * *
359395 GATTTTGAAAAGGTTACCACCAACTCGTGCGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTG-TG
* * **
359427 GATTTTGAAAAAGTTATCACCAACTCAAGTG-G
1 GCTTTTG-AAAGGTTGCCACCAACTC--GTGTG
* * * * * *
359459 GCTTTCGAAAAGATTGCTAACAACTTGTGCAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTG-TG
* *** *
359491 AC-TTTGAAAAGGTTATTACCAACTCGTGTAA
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
359522 GCTTTTGAAAAGGTTACCACCAACTCTTGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * ** * *
359554 ACTTTTCAAAATATTACCACCAACTCGTATG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGTG
* * **
359585 GAC-ATTGAAATAGTTGCTTCCAACTCTTGTGCGCTTTTG
1 G-CTTTTGAAA-GGTTGCCACCAACTC--GT--G----TG
* * * *
359624 AGCATTTGAAAAGGTTGCCACAAACTCTTATAG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* ** *
359657 ACTTTTGAAAATATTGCCAACAACAT-GTGTG
1 GCTTTTG-AAAGGTTGCCACCAAC-TCGTGTG
*
359688 GAC-TTTGAAAAGGTTGTCACCAACTCGTGTG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
359719 AGCTTTTGAAAAGGTTGCTACCAACTCATGTAG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
359752 GATTTTGAAAAGGTTGCCACCAACTTGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
359783 AGCTTTTGAAAAGGTTGCTACCAACTCATGTAG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
359816 GATTTTGAAAAGGTTGCCACCAACTCATGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
**
359847 AGCTTTTGAAATGGTTGTGACCAACTC-TCGTAG
1 -GCTTTTGAAA-GGTTGCCACCAACTCGT-GT-G
* * **
359880 ACTTTTGAAAATGTTGCCACCAACTCGTGCAA
1 GCTTTTG-AAAGGTTGCCACCAACTCGTG-TG
* * *
359912 AC-TTTGAAATGGTTGCCTCCAACTTGTATGGGCTTTTG
1 GCTTTTGAAA-GGTTGCCACCAACTCG--T--G----TG
*
359950 GACCTTTGAAAAGGTTGCCA-CAATCTCGTGTG
1 G-CTTTTG-AAAGGTTGCCACCAA-CTCGTGTG
* * * *
359982 AAC-TTTGAAAAGATTGACATCAACTCGTGTAG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
** * * * *
360014 GCTTTAAAAAAAGCTGCGACCAACTCGTGTTT
1 GCTTT-TGAAAGGTTGCCACCAACTCGTG-TG
* **
360046 GCTTTTGAAAAGGTTGCTACCAACTTATGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
*
360078 GCTTTTGAAAATGTTGCCACCAACTCGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
***
360109 GAC-TTTGACTTTGTTGCCACCAAC-CTGTGTG
1 G-CTTTTGA-AAGGTTGCCACCAACTC-GTGTG
* * * ** *
360140 GAC-TTTGATTATGG-TGCCGCCAACTTGCATAA
1 G-CTTTTGA--AAGGTTGCCACCAACTCGTGT-G
* ** * *
360172 ACTTTAAAAAGGTTACCAGCAACTCGTGTGG
1 GCTTTTGAAAGGTTGCCACCAACTCGTGT-G
* **
360203 GCTTTTGAAA-ATATTACACCCAACTCGTGTAG
1 GCTTTTGAAAGGT-TGCCA-CCAACTCGTGT-G
* ** * * * *
360235 AC-TTTGACTGTGGTGCCACAAACTCATTTG
1 GCTTTTGAAAG-GTTGCCACCAACTCGTGTG
* *
360265 AAC-TTTGTAAAGGTTGCCACCAACACGTGTG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * *
360296 GCTTTTGAAAAAGCTGCCAACAACGT-GTTTGG
1 GCTTTTG-AAAGGTTGCCACCAAC-TCGTGT-G
** **
360328 GCTTTAAAAATCTTGCCACCAACTCGTGTG
1 GCTTTTGAAAGGTTGCCACCAACTCGTGTG
* * *
360358 GACTTTTGCAAAGGGTACCACCAACTCGTGTAT
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
360391 GCTATTGAAAAGATTACCACCAACTCGTGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * ** *
360423 GCCTTAGAAAAGGTTGTTACCAACTCATGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* ** * *
360454 AGATTTTGAAATGG-TGTTACCAACTCGAGTAA
1 -GCTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* * *
360486 GATTTTAAAAGGGTTGCCACCAACTTGTGTAG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* *
360518 GCTTTTGAAAAGGTTGCCAACAACTTGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* ** *
360549 GATTTTGAAAAGGTTTTCACCAACCCGTGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * ** *
360581 GCTTTTGAAAAAGTTTCCAATAACTTGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
360612 GAC-ATTGAAAAGGTTGTCACCAACAC-TGTGG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * * *
360643 GTTTTTGAAAAGATTGCTACTAACTCATGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
360674 CGATTTTGAAAAGGTTGCCACCAACTAGTGTGG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* **
360707 GCTTTTGAAAAGGTTGCCAACAACTTATGTTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTG-TG
* * ** * *
360739 AC-TTTGAAAATGTTGTTACTAGCTCGCATG-G
1 GCTTTTG-AAAGGTTGCCACCAACTCG--TGTG
**
360770 GCTTTCAAAAAGGTTGCCACCAACTC-TCGTAG
1 GCTTT-TGAAAGGTTGCCACCAACTCGT-GT-G
* * * * * *
360802 ACTTTTGAAAAGGTTACCACAAAATCTTATGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
360834 GCTTTTGAAAGGGTTGCCACTAACACATGTG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGTG
* *
360865 GAC-TTTGAAAAGGTTGCCATCAACGCGTGTG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
** *
360896 GACTTTAAATAAGGCT-CCTACCAACTCGTGTGG
1 G-CTTTTGA-AAGGTTGCC-ACCAACTCGTGT-G
* ** *
360929 GCTTTTGAAATAGTT-CCTATTAACTCATGTGG
1 GCTTTTGAAA-GGTTGCC-ACCAACTCGTGT-G
* * * *
360961 GCTTTTAAAAATGTTGCCACTAACTCGCGTG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGTG
* ** *
360992 GAC-TTTGACTATGG-TGCCACCAACTTTTATAG
1 G-CTTTTGA--AAGGTTGCCACCAACTCGTGT-G
* * *
361024 AC-TTTGAAATGGTTACCACCAACTAGTGTG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGTG
* * * * *
361054 ACCTTTTGAAAATGTTG-GACTCTGACT-ATGGTG
1 -GCTTTTG-AAAGGTTGCCAC-C-AACTCGT-GTG
* * * *
361087 CCACAAACTCCTGTGAACTTTGAAAAGGTTACCACCAACTCATGTGG
1 ------GCT--TTTGAA--------AGGTTGCCACCAACTCGTGT-G
** * *
361134 GCATTTAAAAAGGTTGCCACAAACTCGTGCG
1 GC-TTTTGAAAGGTTGCCACCAACTCGTGTG
** * * *
361165 AATTTTTGAAAATGTTACCACCAACTCGTATAG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
361198 GCCTTTGAAAAGGTTGCTACCAACTCGTATAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
361230 GATTTTGAAAAGGTTACCCCCAACTCGTGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * **
361262 GTTTTTAAAAAGGTTATCACCAACTCGTGTGG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGT-G
* * * * **
361294 GCTTTTTAAAAGATTGCTAACAACTCGCATG
1 GC-TTTTGAAAGGTTGCCACCAACTCGTGTG
* * * *
361325 GAC-TTTGAAAAGATTACCACCAACTTGTGCAG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTG-TG
* * *
361357 ACTTTTG-AAGGTTACCACAAACTCGTGTAG
1 GCTTTTGAAAGGTTGCCACCAACTCGTGT-G
* * *
361387 GCCTTTGAAAAGGTAGCTACCAA-TACGTGTGG
1 GCTTTTG-AAAGGTTGCCACCAACT-CGTGT-G
* * *
361419 GATTTTGAAAAGGTTACCACCAACTCGTGCGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTG-TG
* * * *
361451 GATTTTGACAAAGTTGTCACCAACTCATGTGG
1 GCTTTTGA-AAGGTTGCCACCAACTCGTGT-G
* * *
361483 GCTTTTCAAACGGTTGCCAACAACTTGTGTAG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* **
361515 AC-TTTGAAAAGGTTGTTACCAACTCGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
361545 GCCTTTGAAAAGGGTTACCACCAACTCTTGTAG
1 GCTTTTG-AAA-GGTTGCCACCAACTCGTGT-G
* * ** *
361578 ACTTTTCAAAAGGTTGCTGCCAACTCATGT-
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGTG
* * * **
361608 GCATATTGAAATAGTTACTTCCAACTCTTGTGGGCTTTTGG
1 GC-TTTTGAAA-GGTTGCCACCAACTC--GT--G----T-G
*
361649 GCTTTTGAAAAGGTTGCCACCAACTCTTGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
361681 ACTTTTGAAAGGTTGCCATCAA-------G
1 GCTTTTGAAAGGTTGCCACCAACTCGTGTG
* *
361704 ACTTTTGAAATGGTTGCCACTAACTCGTGTGG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* * *
361736 GCTTTTGAAATGGTTACCACCAACACGCGTAG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* ***
361768 GCTTTTGGAAAGATTATTACCAACTCGTGTAG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGT-G
* * * **
361800 AC-TTTGACTATGG-TACCATAAACTCGTGTG
1 GCTTTTGA--AAGGTTGCCACCAACTCGTGTG
* * * *
361830 AAC-TTTGAAAAGGTTACCACCAACTCATATGG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
361862 GCTTTTAAAAAGGTTACCACCAACTCGTGTGG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGT-G
* * * * *
361894 GTTTTTGTAAAAGTTACCACCAACTCATGAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * *
361925 AGCTTTTAAAAAGGTTGCTAACAACTTGTGTAG
1 -GCTTTT-GAAAGGTTGCCACCAACTCGTGT-G
361958 GC-TTTGAAAAGGTTGCCACCAACTCGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
361988 GACTTTTGAAAATGTTGCCAACAACTTGTGTG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
*
362020 GAC-TTTGAAAAGGTTGTCACCAACTCGTGTG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
** * * *
362051 AGCTTTCAAAAAGGTTGCTACTAACTCATGTGG
1 -GCTTT-TGAAAGGTTGCCACCAACTCGTGT-G
* *
362084 GATTTTGAAAGGGTTGCCACCAACT-TTGTG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGTG
**
362114 AGCTTTTGAAAAGGTTGCCAATAACT--TAGTG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGT-GTG
** * * *
362145 GAGTTTGAAAAAGTTGTCA-CAACTCGTTTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
362176 GCTTTTGAAAAGGTTGCGAGCAACTC-TCGCAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGT-G-TG
* * **
362208 ACTTTTGAACATGTTGCCACCAACTCGTGCAA
1 GCTTTTGAA-AGGTTGCCACCAACTCGTG-TG
* * *
362240 AC-TTTGAAATGGTTGCCTCCAACTTGTGTGG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* * *
362271 GCTTTTGGACCTTTGAAAAAGTTACCACCATCTCGTGTGG
1 GC---T-----TTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
362311 GC-TTTGAAAAGATTGACATCAACTCGTGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
** * * * *
362342 GCTTTAAAAAAAGATGCGACCAACTCGTGTTT
1 GCTTT-TGAAAGGTTGCCACCAACTCGTG-TG
* ** *
362374 GCTTTTGAAAAGGTTGCTACCAACTTATATGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
362406 GCTTTTGAAAATGTTACCACCAACTCGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
***
362437 GAC-TTTGACTTTGTTGCCACCAACTCGTGTG
1 G-CTTTTGA-AAGGTTGCCACCAACTCGTGTG
* * * * * *
362468 TAC-TATGACTATGG-TGCCACTAACTTGTATAG
1 -GCTTTTGA--AAGGTTGCCACCAACTCGTGT-G
* ** * *
362500 ACTTTAAAAAGGTTACCAACAACTCGTGTCG
1 GCTTTTGAAAGGTTGCCACCAACTCGTGT-G
* **
362531 GCTTTTGAAA-ATATTACACCCAACTCGTGTG
1 GCTTTTGAAAGGT-TGCCA-CCAACTCGTGTG
* **
362562 GAC-TTTGACTATGG-TGCCATAAACTCGTGTG
1 G-CTTTTGA--AAGGTTGCCACCAACTCGTGTG
*
362593 AAC-TTTGTAAAGGTTGCCACCAACTCGTGTG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * *
362624 GACTTTTGAAAAAGCTGCCAACAACGT-GTTTGG
1 G-CTTTTG-AAAGGTTGCCACCAAC-TCGTGT-G
** ** *
362657 GCTTTAAAAATCTTACCACCAACTCGTGTG
1 GCTTTTGAAAGGTTGCCACCAACTCGTGTG
* * * *
362687 GACTTTTGCAAAGGGTACCACCAACTTGTGTAT
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
362720 GCTATTGAAAAGATTACCACCAACTCGTGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * ** *
362752 GCCTTAGAAAAGGTTGTTACCAACTCATGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* ** *
362783 AGATTTTGAAATGG-TGTTACCAACTCGAGTGG
1 -GCTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* * *
362815 GATTTTAAAAGGGTTGCCACCAACTTGTGTAG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* * *
362847 GCTTTTGAAAAGGTTGCCAACACCTTGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* ** *
362878 GATTTTGAAAAGGTTTTCACCAACCCGTGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * ** *
362910 GCTTTTGAAAAAGTTTCCAATAACTTGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
362941 GAC-TTTGAAAAGGTTGTCACCAACAC-TGTGG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * * *
362972 GTTTTTGAAAAGATTGCTACTAACTCATGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
363003 TGATTTTGAAAAGGTTGCCACCAACTAGTGTGG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* **
363036 GCTTTTGAAAAGGTTGCCAACAACTAATGTTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTG-TG
* * ** * * ***
363068 AC-TTTGAAAATGTTGTTACTAGCTCACATG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
363098 CGCTTTTGAAAAGGTTGCCACCAACTC-TCGTAG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGT-GT-G
* * * * * *
363131 ACTTTTGAAAAGGTTACCACGAAATCTTATGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
***** **** ** *
363163 GCTTTTGGGCTTTTGGGCTTTTAA-AAGGGT-
1 GCTTTTGAAAGGTT--GCCACCAACTCGTGTG
*** * * * **** ** *
363193 GCCACTAACACATGTGGACTTTGAA-AAG-GTT
1 GCTTTTGA-A-AGGTTG-CCACCAACTCGTGTG
** * * *
363224 GC-CATCAATGCGTGTG-----GACT--T-T-
1 GCTTTTGAAAG-GT-TGCCACCAACTCGTGTG
*** * * * * *
363246 --AAAT-AAGGCTGCTACCAAC-TCGT-GTG-G
1 GCTTTTGAAAG--GTTGCCACCAAC-TCGTGTG
* *
363273 GCTTTTGAAATAGG-T-CCTATCAACTCATGTGG
1 GCTTTTG-AA-AGGTTGCC-ACCAACTCGTGT-G
* *
363305 GCTTTTGAAAATGTTGCCACTAACTCGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* ** *
363336 GAC-TTTGACTATGG-TGCCACCAACTTTTATAG
1 G-CTTTTGA--AAGGTTGCCACCAACTCGTGT-G
* * *
363368 AC-TTTGAAAAGGTTGCCACCAATTAGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * * *
363398 ACCTTCTGAAAAGGTTGCTACCAACTCGTATAA
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
363431 GATTTTGAAAAAGTTGCCACCAACTCGTGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
363463 GTTTTTGAAAAGGTTACCACCAACTCGTGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
363495 GCTTTTTAAAAGGTTGCTAACAACTCGCATG-G
1 GC-TTTTGAAAGGTTGCCACCAACTCG--TGTG
* * *
363527 GC-TTTGAAAAGATTGCCACCAACTTGTGCG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
363557 GACTATTGAAAAGGTTACCA-CAAGTTCGTGTAG
1 G-CTTTTG-AAAGGTTGCCACCAA-CTCGTGT-G
* * *
363590 GCCTTTGAAAAGGTAGCTACCAA-TACGTGTGG
1 GCTTTTG-AAAGGTTGCCACCAACT-CGTGT-G
* * *
363622 GATTTTGAAAAGGTTACCACCAACTCGTGCGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTG-TG
* * * * *
363654 GATTTTGACAAAGTTGTCACTAACTCATGTGG
1 GCTTTTGA-AAGGTTGCCACCAACTCGTGT-G
** * *
363686 GCTTCTCAAAAGGTTTCC-CACAACTTGTGTAG
1 GCTT-TTGAAAGGTTGCCAC-CAACTCGTGT-G
* **
363718 AC-TTTGAAAAGGTTGTTACCAACTCGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
363748 GCCTTTGGAAAGGGTTACCACCAACTCTTGTAG
1 G-CTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* * *
363781 GCTTTTTGAAAGGTTGTCGCCAACTCATGT-
1 GC-TTTTGAAAGGTTGCCACCAACTCGTGTG
* * ** *
363811 GCATTTTGAAATAGTTACTTCCAACTTTTGTGGGCTTTTGG
1 GC-TTTTGAAA-GGTTGCCACCAAC--TCGT--G----T-G
* *
363852 GCTTTTGAAAAGGTTGCCACTAACTCTTGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
363884 ACTTTTGAAAGGTTGCCATCAA-------G
1 GCTTTTGAAAGGTTGCCACCAACTCGTGTG
* *
363907 ACTTTTGAAATGGTTGCCACCAATTC-TGTGG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* *
363938 GCTTTTGAAATGGTTACCACCAACACGTGTAG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* ***
363970 GCTTTTGGAAAGATTATTACCAACTCGTGTAG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGT-G
* * * **
364002 AC-TTTGACTATGG-TACCATAAACTCGTGTG
1 GCTTTTGA--AAGGTTGCCACCAACTCGTGTG
*
364032 AAC-TTTGAAAAGGTTGCCACCAACTCGTGTGG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * * *
364064 GTTTTTGTAAAAGTTACCACCAACTCATGAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * *
364095 AGCTTTTAAAAAGGTTGCTAACAACTTGTGTAG
1 -GCTTTT-GAAAGGTTGCCACCAACTCGTGT-G
364128 GC-TTTGAAAAGGTTGCCACCAACTCGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
364158 GACTTTTGAAAATGTTGCCAACAACTTGTGTG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
*
364190 GAC-TTTGAAAAGGTTGTCACCAACTCGTGTG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
** * *
364221 AGCTTTCAAAAAGGTTGCTACCAACTCATGTGG
1 -GCTTT-TGAAAGGTTGCCACCAACTCGTGT-G
* *
364254 GATTTTGAAAGGGTTGCCACCAACT-TTGTG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGTG
** *
364284 AGCTTTTGAAAAGGTTGCCAATAACTTAC-T-CG
1 -GCTTTTG-AAAGGTTGCCACCAAC-T-CGTGTG
* * * *
364316 AC-TTTGAAAAAGTTGTCACCAACTCGTTTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
*
364347 GCTTTTGAAAAGGTTGCGACCAACTC-TCGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGT-GT-G
* ** **
364379 ACTTTTGAACATATTGCCACCAACTCGTGCAA
1 GCTTTTGAA-AGGTTGCCACCAACTCGTG-TG
* * * *
364411 AC-TTTGAAATGGTTACCTCCAACTTATGTGGGCTTTTG
1 GCTTTTGAAA-GGTTGCCACCAAC-T-CGT--G----TG
* *
364449 GACCTTTGAAAAGGTTGCCACCATCTCGTGTG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
364481 TGC-TTTGAAAAGATTGACATCAACTCGTGTGG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
*** * * ** *
364513 GCTTAAAAAAAAGCTGCGTCCAACTCGTGTCT
1 GCTT-TTGAAAGGTTGCCACCAACTCGTGT-G
* *
364545 GCTTTTGAAAAGGTTGCTACCAACTCATGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
364577 GCTTTGGAAAATGTTGCCGCCAACTTGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
***
364608 GAC-TTTGACTTTGTTGCCACCAACTCGTGTG
1 G-CTTTTGA-AAGGTTGCCACCAACTCGTGTG
** * * * *
364639 GAC-TTTGACCGTGGTGCCGCCAACTTGTATAG
1 G-CTTTTGAAAG-GTTGCCACCAACTCGTGT-G
* ** * *
364671 ACTTTAAAAAGGTTACCAGCAACTCGTGTCG
1 GCTTTTGAAAGGTTGCCACCAACTCGTGT-G
* **
364702 GCTTTTGAAA-ATATTACACCCAACTCGTGTG
1 GCTTTTGAAAGGT-TGCCA-CCAACTCGTGTG
** * **
364733 GAATTTGACTATGG-TGCCATAAACTCGTGTG
1 GCTTTTGA--AAGGTTGCCACCAACTCGTGTG
* * *
364764 AAC-TTTGTAAAGGTTGCCAACAACTCTTGTGG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
364796 GCTTTTGAAAAAGTTGCCAACAACGT-GTTTAG
1 GCTTTTG-AAAGGTTGCCACCAAC-TCGTGT-G
** *
364828 GC-TTTGAAAATCTTGTCACCAACTCGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
*
364858 GACTTTTGCAAAGGGTGCCACCAACTCGTGTG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * **
364890 GCCCCTTTAAAAGGGTCACCACCAACTCGTGTGG
1 G--CTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* * **
364924 GCCTTAGAAATGGTTGTTACCAACTCGTGTGG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* * * *
364956 GATTTTGAAAAGGTAT--TACCAACTTGAGTGG
1 GCTTTTG-AAAGGT-TGCCACCAACTCGTGT-G
* * **
364987 GATTTTAAAAGGGTTGCCACCAACTCAAGTAG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* * *
365019 GCTTTTGAAAAGGTTACCAACAACTTGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * *
365050 GATTTTGAAAACGTTGTCACCAACCCGTGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
365082 GCTTTTGAAAAAGTTTCCAACAACTTGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
*
365113 GAC-TTTGAAAAGGTT-CTCACCAACAC-TGTGG
1 G-CTTTTG-AAAGGTTGC-CACCAACTCGTGT-G
* * * * *
365144 GTTTTTGAAAAGATTGCTACCAACTCATGTAT
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * * *
365176 GATTTTGAAAAGGTTACCACCAAATCCTGGGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGT-GTG
* * * **
365208 GCTTTTGAAAAGATTGCTAGCAACTTATGTTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTG-TG
* **** *
365240 AC-TTTGAAAAGGTTTTTTCTAACTTGCGTG-G
1 GCTTTTG-AAAGGTTGCCACCAAC-T-CGTGTG
* * *
365271 GCTTTTGAAAATGTTGCCACCAACACGTATG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
*** * *
365302 GAC-TTTGAAAAGGTCATCATCAA-TGCATGTGG
1 G-CTTTTG-AAAGGTTGCCACCAACT-CGTGT-G
** ** * *
365334 GCTTTAAATAAGACTGCTACCAACTCGTATGG
1 GCTTTTGA-AAGGTTGCCACCAACTCGTGT-G
* *
365366 GCTTTTGAAATGGTT-CTCATCAACTCATGTGG
1 GCTTTTGAAA-GGTTGC-CACCAACTCGTGT-G
* * *
365398 GCTTTTGAAAATGTTGCCACTAACTCATGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* ** *
365429 GAC-TTTGACTATGG-TGCCACCAACTTTTATAG
1 G-CTTTTGA--AAGGTTGCCACCAACTCGTGT-G
* ** *
365461 AC-TTTGAAAAGGTTGCCACCAACTAATGCG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * **** *
365491 AGCTTCTGAAAATGTTAGACTTTGACT-ATG-G
1 -GCTTTTG-AAAGGTT-GCCACCAACTCGTGTG
*** * * **** * **
365522 TGC--CACAAA-CTCG-TGTGAACT-TTGAA
1 -GCTTTTGAAAGGTTGCCACCAACTCGTGTG
**** * *
365548 AAGGTT-ACCA-----CCAACTC-A-T-GTGGG
1 GCTTTTGA-AAGGTTGCC-AC-CAACTCGTGTG
**
365572 CTTTTAT-AAAGGTTGCCACCAACTCGTGTG
1 GCTTT-TGAAAGGTTGCCACCAACTCGTGTG
* * * *
365602 GATTTTTGAAAATGTTACCACCAACTCGTTTGG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
365635 GCCTTTGAAAAAGTTGCTACCAACTCGAGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
365667 GATTTTAAAAGGTTGCCACCAACTCAG-GTG
1 GCTTTTGAAAGGTTGCCACCAACTC-GTGTG
* **
365697 CGCTTTTGAAAAGGTTGCCAACAACTATTGTAG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
** * * *
365730 AATTTTAAAAAGGTTGTCACTAACTCGTGTG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGTG
*
365761 GAC-TTTGAAATGGTTGCCACCAATTCGTGTGAGCTTTTAG
1 G-CTTTTGAAA-GGTTGCCACCAACTC--GT--G----T-G
*
365801 GCTTTTGAAAAGGTTGCCACCAACTCTTGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * * *
365833 ACTTTTGAAAGGTTGGCATCAACTCTTATG
1 GCTTTTGAAAGGTTGCCACCAACTCGTGTG
* * *
365863 GAC-TTTGAAATAGTTACCACCAACTCATGTAG
1 G-CTTTTGAAA-GGTTGCCACCAACTCGTGT-G
*
365895 AG-TTTTGAAAAGGTTGCTACCAACTCGTGTGG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
365927 GGTTTTGAAAAAGTTACCACCAACTCGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * *
365958 GACTTTTTAAAAGGTTTCTAACAACTCGCATG-G
1 G-C-TTTTGAAAGGTTGCCACCAACTCG--TGTG
* * *
365991 GC-TTTGAAAAGGTTGCTAGCAACTTGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
366021 GACTTTTGAATAGGTTACCACAAACTCGTGTAG
1 G-CTTTTGAA-AGGTTGCCACCAACTCGTGT-G
* * *
366054 GCCTTTGAAAAGGTTGCTACCAACACGTGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * * * *
366086 GATTTTCAAAAGGTTACCCCCAACTCATGCCG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTG-TG
* * **
366118 GATTTTGAAAAAGTTATCACCAACTCGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
*
366149 GCTTTTCAAAAGGTTGCCACCAACTCGTGTGG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGT-G
* * * *
366181 GTTTTTGTAAAAGTTACCATCAACTCGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * *
366212 AGCTTTTAAAAATGTTGCTAACAACTCGTGTAG
1 -GCTTTT-GAAAGGTTGCCACCAACTCGTGT-G
* *
366245 GC-TTTGAAAAGGTTACCACCAACTCATGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
366275 GACTTTTGAAAATGTTGCCAACAACTTGTGT-
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * *
366306 GCACTTTGAAATGGTTGTCACCAACTAGTGTTA
1 GC-TTTTGAAA-GGTTGCCACCAACTCGTG-TG
** ** *
366339 GCTTTTGAAAAGGTTGCTGCCAACTTATGCAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTG-TG
* * * * *
366371 GATTTTGAAAAGGTTGTCATCAATTTGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* **
366402 AGCTTTTGAAAAGGTTGCCAACAACTTATGTAG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
366435 AC-TTTGAAAAAGTTGTCACCAACTCGTGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
366466 GCTTTTGAAAAGGTTACGACCAACTC-TCGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGT-GT-G
* * **
366498 AG-TTTTGAAAATGTTGCCACCAACTCATGCAA
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTG-TG
* * * *
366530 AC-TCTGAAATGGTTGCCTCCAACTTGTGTGGGCTTTTG
1 GCTTTTGAAA-GGTTGCCACCAAC-T-CGT--G----TG
** *
366568 GACTTTTGAAAAGGTTGCCACCTTCTCATGTAG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * * *
366601 AC-TTTGAAAAAGTTGACATCAACTCATGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
** * * *
366632 GCTTTAAAAAAAGCTGCGACCAACTCGTGCCT-
1 GCTTT-TGAAAGGTTGCCACCAACTCGTG--TG
* * *
366664 ACTTTTGAAAAGTTTGCTACCAACTCAAGTG-G
1 GCTTTTG-AAAGGTTGCCACCAACTC--GTGTG
* * ** * *
366696 GCTTTGGAAAATGTTATCGCCAACTCATGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
366727 GACTTTTTAAAAGGTTGCCAACAACTCGCGTGG
1 G-C-TTTTGAAAGGTTGCCACCAACTCGTGT-G
*
366760 GC-TTTGAAAAGGTTGCCACCAACTCGTATG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
366790 GACTTTTGAAAAGGTTACCACAAACTCGTGTAG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * * * * *
366823 GCCTTCGAAAATGTAGCTACCAACACATGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
366854 AGATTTTGAAAAGGTTGCCACCAACTCGTGCG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * * * *
366886 AGATTTTAATAAAGTTGTCACCATCTCTTGTGG
1 -GCTTTTGA-AAGGTTGCCACCAACTCGTGT-G
** * *
366919 GCTTTTGAAAAGGTTGCCAATAACTTGTGCAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTG-TG
* **
366951 AC-TTTGAAAAGGTTGTTACCAA--CGTG-G
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
366978 GCTTTTGAAAAGGTTACCACCAACTCTTGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
367010 ACTTTTTAAAAGGTTGCCACCAACTCGCGTG
1 GC-TTTTGAAAGGTTGCCACCAACTCGTGTG
** * ** *
367041 GAC-AATAAAATTTTTGCCACCAATTCTTGTGACCTTTTGG
1 G-CTTTTGAAA-GGTTGCCACCAA--CTCGTG------T-G
* * * *
367081 GCTTTTAAAATAGTTACCACCAACTCTTGTG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGTG
* *
367112 GAATTTTGAAAGGTTGCCATCAACTCGTGTG
1 G-CTTTTGAAAGGTTGCCACCAACTCGTGTG
* * ** *
367143 GAC-TTTGAAATAGTTCCCAATAACTTGTGTG
1 G-CTTTTGAAA-GGTTGCCACCAACTCGTGTG
* **
367174 GATTTTTGAAAAGGTTGCCACCAACTTATGTGG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
367207 GC-TTTGACTATGG-TGCCACAAACTCATGTG
1 GCTTTTGA--AAGGTTGCCACCAACTCGTGTG
* * * *
367237 AAC-ATTGTAAAGGTTGCCCCCAACTCCTGTGG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * * *
367269 GCTCTTGAAAAGATTGCCAACGACTCGTTTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* ** * * * *
367301 GC-TTTGAAAATGTTATCACAAATTCATATG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
367331 GACTTTTGCAAAGGTTGCCACCAACTCTTATG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * * * * * *
367363 GGTTTTAAAAAGGTTACTACTAAGTCATGAAG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTG-TG
* * *
367395 GCCTTTGAAAAGCTTGCTACCAACTCGTGTTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTG-TG
* * ** * * *
367427 GATTTTGGAACGGTTGCCATGAGCTGGAGTG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGTG
* * * * *
367458 AGATTTTGAAAAAGTTACCACCAACTCGGGTCA
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
367491 CCTTTTGAAAAGGTTGCTACCAACTTGTGCG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
*
367522 GAC-TTTGAAAAGGTTGTCACCAA-TACGTGTG
1 G-CTTTTG-AAAGGTTGCCACCAACT-CGTGTG
* *** ** *
367553 TG-TTTTAGAAAAAGTTTTTAATAACTTGTGTG
1 -GCTTTT-G-AAAGGTTGCCACCAACTCGTGTG
* * * *
367585 GAC-TTTGAAAAAGTTGTCACCAACT-TTATGG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
367616 GTTTTTGAAAAGGTTGCTACCAACTCGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * **
367647 CGATTTTGAAAAAGTTAACACCAACTCGTGTGG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
367680 GCTTTTAAAAAGGTTGCCACTAACTCGTGTG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGTG
* * * *
367711 GATTTTTTAAAATGTTACCACCAACTCGTGTGG
1 G--CTTTTGAAAGGTTGCCACCAACTCGTGT-G
* * * *
367744 GCCTTTGAAAAGGTTGCTACCAACTTGTATAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
367776 GATTTTTAAAAAGTTGCCACTAACTCGTGTG
1 G-CTTTTGAAAGGTTGCCACCAACTCGTGTG
* * * *
367807 GCATTTTGAAAAGGTTACGACTAACTCATGTAG
1 GC-TTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
367840 GCTTTTAAAAGGTTGCCAACAACTTGTGTAG
1 GCTTTTGAAAGGTTGCCACCAACTCGTGT-G
* * * *
367871 AC-TTTGAAAAGGTTGTCACTAACTCGGGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
** * **
367902 GCTTTTGAAAAGGTTGCTGCCAATTATTGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
** * * * * * *
367934 AATTTTAAAAAGGTTACTACTAACTTGTATG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGTG
*
367965 G-TCTTTGAAATGGTTGCCACCAATTCTTGTGGGCTTCTAG
1 GCT-TTTGAAA-GGTTGCCACCAA--CTCGT--G----T-G
* * *
368005 GCTTTTGAAAAGGATGCCACCAACTCTTATG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* ** * *
368036 GACATTTGAAAGGTTGCCATTAACTCCTATG
1 G-CTTTTGAAAGGTTGCCACCAACTCGTGTG
* *
368067 GAC-TTTGAAATTGTTGCCACCAACTCATGTAG
1 G-CTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* *
368099 AG-TTTTGAAAATGTTGCTACCAACTCGTGTGG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
368131 GGTTTTGAAAATGTTGTCACCAACTCGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * *
368162 GAAATTTTAAAAGGTTGCCAACAACTCGCGTGG
1 G--CTTTTGAAAGGTTGCCACCAACTCGTGT-G
**
368195 GCTTTAAAAAGGTTGCCACCAACTCGTGTG
1 GCTTTTGAAAGGTTGCCACCAACTCGTGTG
*
368225 GACTTTTGAAAAGGTTACCACCAACTCGTGTAG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
368258 G-TCATTGAAAAGGTTGCTACCAACACGTGTGG
1 GCT-TTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
368290 GATTTTGAAAAGGTTACCCCCAACTCGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
368321 AGATTTTGAAAAAGTTGTCACCAACTCGTGTG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * ** *
368353 AGCTTTTTAAAAGGTTGCCAACAACTTTTGCAG
1 -GC-TTTTGAAAGGTTGCCACCAACTCGTG-TG
* * **
368386 AC-TTTAAAATGGTTGTTACCAACTCGTGT-
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGTG
* *
368415 GCATTTTTGAAAAGGTTACCACCAACTCTTGTAG
1 GC--TTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
368449 ACTTTTCAAAAGATTGCCACCAACTCGTGTG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGTG
* * * **** * * *
368480 GAC-ATTAAAATAGTTAATTCTAACTCTTATGG
1 G-CTTTTGAAA-GGTTGCCACCAACTCGTGT-G
*
368512 GCTTTTGAAAAGGTTG-CACCAACTCTTGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
368543 ACTTTTGAAAGGTTGCCATCAACTCGTGTG
1 GCTTTTGAAAGGTTGCCACCAACTCGTGTG
* *
368573 GAC-TTTAAAATGGTTGCCACCAACTTGTGTGG
1 G-CTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* * *
368605 GCTTTTGAAAAGGTTACCACCAACACTTGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
368637 GCTTTTGAAAAAGTTACTACCAACT-GATGTAA
1 GCTTTTG-AAAGGTTGCCACCAACTCG-TGT-G
* * * *
368669 AC-TCTGACTATGG-TGCCACAAACTCGTGTG
1 GCTTTTGA--AAGGTTGCCACCAACTCGTGTG
* * * *
368699 AAC-TTTGTAAAGGTTACCACTAACTCTTGTGG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
368731 GTTTTTAAAAAGGTTACCACCAATTCGTGTTG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTG-TG
* * * *
368763 GTTTTTGTAAAAGTTGCTACGAACTCGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
368794 AGCTTTTAAAAAGGTTGCCAACAACTCGTGTAG
1 -GCTTTT-GAAAGGTTGCCACCAACTCGTGT-G
* *
368827 GC-TTTGAAAAGGTTACCACTAACTCGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
** * * *
368857 GACTTTCAAAAATGTTGCCAACAACTTGTGTG
1 G-CTTT-TGAAAGGTTGCCACCAACTCGTGTG
*
368889 GAC-TTTGAAAAGGTTGTCACCAACTCGTGTG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * *
368920 AGCTTTTGAAAAGGTTGCTACTAACTCATGCGG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTG-TG
* *
368953 GATTTTGAAAAGGTTGCCACCAACTTGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
** **
368984 AGCTTTTGAAAAGGTTGCCAATAACTTATGTG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
369016 GAC-TTTGAAAAGGTTGTCACCAACTCATGTGG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
369048 GCTTTTGAAAATGTTGCGACCAACTC-TCGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGT-GT-G
* *
369080 ACTTTTTAAAAGGTTGCCACCAACTCATGTGGGCTTTTG
1 GC-TTTTGAAAGGTTGCCACCAACTC--GT--G----TG
* * * * *
369119 GCTTTTGAAAAGTTGCTATCGACTCCTGTG
1 GCTTTTGAAAGGTTGCCACCAACTCGTGTG
* * *
369149 GAC-TTTGAAATTGTTACCACCAACTCGTGAGG
1 G-CTTTTGAAA-GGTTGCCACCAACTCGTG-TG
** * *
369181 GCCTTTAAAAAGGTTACCACCAACTCATGTG
1 G-CTTTTGAAAGGTTGCCACCAACTCGTGTG
* * **
369212 AGCTTTTGAAAATGTTGCTATTAACTCGTGTG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * ** *
369244 GACATTGGAAAGGTTGGCACCAACAAGTTTGG
1 G-CTTTTGAAAGGTTGCCACCAACTCGTGT-G
* * * * *
369276 GTTTTTTAAAAGATTTCCACCAACTCATGTG
1 G-CTTTTGAAAGGTTGCCACCAACTCGTGTG
* * ** *
369307 AAC-TTTGAAAAGGTTACCAATAACTCGTATGG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* **
369339 GC-TTTGAAAAGGTTGCC-CTAACTTATGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
369369 GC-TTTGAAAAGGATGTCC-CTAAGTCGTGTG
1 GCTTTTG-AAAGGTTG-CCACCAACTCGTGTG
* *
369399 GAC-TTTGAAAAGGTTGCCGCTAACTCGTGTGG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
** * * *
369431 GCTTTCAAAAAGGCTGTCACCAACTTATGTGTG
1 GCTTT-TGAAAGGTTGCCACCAAC-T-CGTGTG
** * * * **
369464 TTTTTTAAAAAGTCGCCATAAACTCGTGTGG
1 GCTTTTGAAAGGTTGCCACCAACTCGTGT-G
* * * *
369495 GCTTTTGAAAATGTTGCCAACGACTCATGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
*
369527 GC-TTTGAAAAGGTTACCACCAACTCGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
369557 GACTTTTGAAAAGGTTACCCCCAACTTGTGTG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
369589 AGCTTTTGAACTA-GTTGCTACTAACTTGTGTGG
1 -GCTTTTGAA--AGGTTGCCACCAACTCGTGT-G
* * **
369622 GATTTTGAAAAGGTTGCCTCCAACTTATGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
369653 AGATTTTGAAAAGGTTGCCACCAACTCTTGTAG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
369686 ACTTTTGAAAAGGTTGCCACCAACTCGCGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* ** * * *
369717 GAC-TTTAAAATTTTTGCCCCCAATTTGTGTGACCTTTTGG
1 G-CTTTTGAAA-GGTTGCCACCAA-CT-CGTG------T-G
* * **
369757 GCTTTTAAAATGGTTGTCACCAACTTTTGTG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGTG
* *
369788 GACTTTTGAGAGGTTGCCACTAACTCGTGTG
1 G-CTTTTGAAAGGTTGCCACCAACTCGTGTG
* * * **
369819 AAC-TTTGAAATAGTTACCAATAACTCGTGTG
1 -GCTTTTGAAA-GGTTGCCACCAACTCGTGTG
* * *
369850 GATTTTTGAAAAGGTTGCCACCAACTCATATG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
369882 GAC-TTTGACTA-TTGTGCCA-CAA--CGTGCG
1 G-CTTTTGA-AAGGT-TGCCACCAACTCGTGTG
* * * * *
369910 AAC-TTTGTAAAAGTTGCCACCATCTCCTATG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
369941 AGCTTTTGAAAAGGTTGACAACAACTCGTTTCG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * **
369974 GC-ATTGAAAATGTTACCACCAACTCGCATG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
370004 GACTTTT-ACAATGCTTGCCTCCAACTCGTGTGG
1 G-CTTTTGA-AA-GGTTGCCACCAACTCGTGT-G
* * * * *
370037 GCTTTTAAAAAAGTTACTACCAACTCGGGTGG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGT-G
* *** *
370069 GCCTTTGAAAAGGTTATTACGAACTCGTGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
370101 GATTTTGAAAAGGTTACC-CCTAACTCCTATGG
1 GCTTTTG-AAAGGTTGCCACC-AACTCGTGT-G
* *
370133 GGTTTTGAAAAGGTTGCCACTAACTCGTGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* **
370165 AC-TTTGAAAAGGTTGTAACCAACTCGTGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
370196 GCTTTTGAAAAAGTTTCCAACAACTTGTGTTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTG-TG
* ** * *
370228 AC-TTTGAAAAAATTTGTCACCAACTC-TATGG
1 GCTTTTG--AAAGGTTGCCACCAACTCGTGT-G
* * * *
370259 GTTTTTGAAAAGGTTGCTA-CAACTTGTTTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
370289 CGATTTTGAAAAGGTTGCCACTAACTCGTGTG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
370321 CGCTTTTGAAAAGGTTACCAACAACTTGTGTTG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTG-TG
* ** * * * *
370354 ACTTTCAAAAGGTGGTCACTAACTCTTGTGG
1 GCTTTTGAAAGGTTGCCACCAACTCGTGT-G
* *
370385 GCTTTTGAAAAGCTTGCCACCAACTCTTGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
370417 ACTTTTGAAAAGGTTACCACCAACTCTTGTGGGCCTTTCG
1 GCTTTTG-AAAGGTTGCCACCAACTC--GT--G----T-G
370457 GCTTTTGAAAAGGTTGCCACCAACTCGTGT-
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
** * *
370487 GCACATTGAAAAGGTTGCCATCAACTTGTGTG
1 GC-TTTTG-AAAGGTTGCCACCAACTCGTGTG
* * **
370519 AG-TTTTAAAAATGGCTAACACCAACTCGTGTGG
1 -GCTTTT-GAAA-GGTTGCCACCAACTCGTGT-G
*** ** *
370552 GCTTTTGAAAAGGTTGCTTTCAACTTATATAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
370584 GCTTTTGAAAATGTTGCCAGCAACTTGTTTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * ** *
370615 GAC-TTTGACTATGG-TGCTACCAATTTTTATAG
1 G-CTTTTGA--AAGGTTGCCACCAACTCGTGT-G
* * *
370647 AC-TTGGAAAAGGTTACCACCAACTCGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * ** * *
370677 AGCTTTTAAAAATGTTG-GACTTTGACT-ATGATACAA
1 -GCTTTT-GAAAGGTTGCCAC--CAACTCGTG-T---G
* * ** * *
370713 ACTCGTGTG-AACTTTG--A--AA--AG-GTT
1 GCT--TTTGAAAGGTTGCCACCAACTCGTGTG
**** **** * * ** ***
370737 GC-CACCAACTCATG---CGAGCTTTTAAA
1 GCTTTTGAAAGGTTGCCACCAACTCGTGTG
*** ** ** ***
370763 AAGTTTGCCA--CAG--ACTCGGGT--TGAT-
1 GCTTTTGAAAGGTTGCCAC-CAACTCGTG-TG
** *** * * **
370788 TTTTAAAAAGGTTACCACCAACTC-A-T-GTG-G
1 GCTTTTGAAAGGT--TGCC-AC-CAACTCGTGTG
* * *
370818 GCCTTTGAAAAGGTTTCTACCAACTCGTGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
370850 GATTTTGAAAAAGGTTACCACAAACTCGTGTGG
1 GCTTTTG--AAAGGTTGCCACCAACTCGTGT-G
* * * *
370883 GATTTTGAAAAGTTTGCCACAAACTCATGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
370914 GACTTTTGAAAAGGTTTCCAACAACTGGTGTG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * * *
370946 GAC-TTCGAAAAAGTTGTCACTAACTCGTATAG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
370978 GCTTTTGAAACTGTTGCCACCAACTC-TCGTAA
1 GCTTTTGAAA-GGTTGCCACCAACTCGT-GT-G
* * *
371010 ACTTTTGAAAAGGTTACCACCAACTCATGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * *
371041 GACTTGTGAAAAGGTTGCCAACAATTGGTGTAG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * * * *
371074 AC-ATTGTAAAAGTTGCCGCTAACTCGTGTAA
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
371105 GCTTTTGAAACGGTTGCCACTAACTCTTGTAG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* * *
371137 ACTTTTAAAAGGTTGCCACCAACTTGTGTCG
1 GCTTTTGAAAGGTTGCCACCAACTCGTGT-G
* * * * *
371168 G-GTTTGAAATGGTTGCTAACAATTTGTGTGGACTTTTGG
1 GCTTTTGAAA-GGTTGCCACCAA-CT-CGT-G-----T-G
*
371207 GCTTTTGAAAAGGTTGCCACCAACTCTTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
371238 GACTTTTGAAAGCTTGCCATCAACTCATGTG
1 G-CTTTTGAAAGGTTGCCACCAACTCGTGTG
*
371269 GAC-TTTGAAATAGTTGCCACCAACTCGTGTG
1 G-CTTTTGAAA-GGTTGCCACCAACTCGTGTG
** * * *
371300 TATTTTTGAAAAGGTTGCCACCTACTCCTATCG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
371333 GCTTTTGAAAAGGTTACCAACAACTTGTTTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
371365 GC-TTTGAAAAAGTTACCACCAACTCATGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* ** * * *
371395 GCCATTTGTAAACCTTACCACCAACTTGTATAG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
371428 GCTTTTGAAAAGGTTGCTACCAACTCATGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
371460 GATTTTAAAAGTTTGCCGCCAACTCGTGTTG
1 GCTTTTGAAAGGTTGCCACCAACTCGTG-TG
** * *
371491 AATTTTGAAAAAGTTGCCACCAACTTAAGTG-G
1 GCTTTTG-AAAGGTTGCCACCAAC-T-CGTGTG
* * * *
371523 GCTTTTGAAAAGATTACCAACAACTTGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
371554 GAC-TTTGAAAAGGCTGCTACCAACTCGTGTGG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
371586 GCCTTTGAAAAGGTTGCCATCAACTCATGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
371617 AGCTTTTGAGAATGTTGCCACCAACTCGTGCG
1 -GCTTTTGA-AAGGTTGCCACCAACTCGTGTG
* ** **
371649 GACTTTCACT-ATA-G-TGCCACCAACTTTTAAAG
1 G-CTTT---TGAAAGGTTGCCACCAACTCGT-GTG
* * * **
371681 AC-TTTGAAAAGGCTGCCACCAACTGGTAAAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGT-GTG
** * * *
371712 GCTTCTAAAAATGTTG-GACTTTAACT-GTG-G
1 GCTT-TTGAAAGGTTGCCAC--CAACTCGTGTG
*** * * * ** *
371742 TGC--CACAAACTCGTGTG-AACTTTGAA-AAG-GTT
1 -GCTTTTGAAA--GGT-TGCCAC---CAACTCGTGTG
*** * * *** *** *
371774 GC--CACAAACTCGTGTGGGCTTTAAAAAG-GTT
1 GCTTTTGAAA---G-GTTGCCACCAACTCGTGTG
** * * * **** * * *
371805 GC-CCTCAATTCGTGTGGGCTTTGAA--AGGGTT
1 GCTTTTGAA--AG-GT-TGCCACCAACTCGTGTG
** *** ***** * **
371836 GCCCTT-AACTCTT---TTGGGCT-TTGAA
1 GCTTTTGAAAGGTTGCCACCAACTCGTGTG
** * ** * * *
371861 AATGTTGCCA---T-CAACTC--GT-GT-AG
1 GCTTTTGAAAGGTTGCCAC-CAACTCGTGTG
* * * * *
371884 GATTTTAAAAAGGCTGCCAACAACTCGTATGG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGT-G
* *
371916 GCTTTTGAAAAGGTTGCCACCAACTCATATG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
** * * * *
371947 GACTTTAAAAAAGTTGCCAACAAGTCGGGTGG
1 G-CTTTTGAAAGGTTGCCACCAACTCGTGT-G
371979 GCTTTTGAAAAGGTTGCCACCAACTCGTGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
372011 ACTTTTGAAAATGTTACCACCAACTCATGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * * *
372042 GAC-TTTGACTACGATGCCACAAACTTGTGTG
1 G-CTTTTGA-AAGGTTGCCACCAACTCGTGTG
* * * * *
372073 AAC-CTTGAAAAGGTTACCACTAACTCATGTAG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
372105 GCTTTTAAAAAGGTTCCCACCAACTCGTGT-
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGTG
* * * *
372135 GCATTTTAAAAAAGTTGTCACCAACTCATGTGG
1 GC-TTTT-GAAAGGTTGCCACCAACTCGTGT-G
* *
372168 GCTTTTGAAAAGGTTGCCAACAACTCGTATG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
372199 AGC-TTTGAAAAGGTTGCCACCAACTTGGGTG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
372230 GACTTTTGAAAAGGTTACCACCAACTCGTTTGG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
** * * *
372263 GCCTTTCAAAAGGTTGCTACCAACTCATGCAG
1 G-CTTTTGAAAGGTTGCCACCAACTCGTG-TG
** **
372295 GCTTTTGAAAATATTGCCATAAACTCGTGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
372327 GATTTTGAAAAGGTTTCCGCCAACTCTTGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
372359 GCTTTTGAAAAGGTTGCCAACAACTTGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
372390 GAC-TTTGAAAATGTTGCCACGAACTCGTGTGG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * **** *
372422 GTTTTTGAAAATGTTAGACTTTGACT-ATGGTG
1 GCTTTTG-AAAGGTT-GCCACCAACTCGT-GTG
* * *
372454 CCACAAACTTTTGTAAACTTTGAAAGGGTTACCACTAACTCGTGTG
1 ------GC--TT-------TTGAAA-GGTTGCCACCAACTCGTGTG
* * * *
372500 TGC-TTTGAAAAGATTGCCCCCAATTCGTATGG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * * *
372532 GC-TGTGAAAAGGTTACCCCCAATTCATGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
372562 GAC-TTTGAAAATGTTGCCATCAACTCGTGTGG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
372594 GCTTATTGAAAAGGCTACCAACAACTCGTGTGG
1 GCTT-TTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
372627 GCTTTCGAAAAGGTTGCCATCAACTCATATG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
*
372658 GAC-TTTGAAAGGTTGCCACCAATTCGTGTGG
1 G-CTTTTGAAAGGTTGCCACCAACTCGTGT-G
* ** * *
372689 GCTTCTGATTGGCTGCCATCAACTCGTGTAG
1 GCTTTTGAAAGGTTGCCACCAACTCGTGT-G
** * * * *
372720 ATTTTTAAAAAAGTTACCACCAACTCTTGTG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGTG
* * *
372751 GAC-TTTGACTATGG-TGCCACAAACTTGTGTG
1 G-CTTTTGA--AAGGTTGCCACCAACTCGTGTG
* * * * * *
372782 AAC-ATTGAAAAAGTTGTCGCCAAATCGTGTG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
372813 GTCTTTTAAAAAGGTTGCCACCAACTCATGTG
1 G-CTTTT-GAAAGGTTGCCACCAACTCGTGTG
* * * *
372845 GGTTATTGGAAAAGTTGTCACCAACTCATGTGG
1 GCTT-TT-GAAAGGTTGCCACCAACTCGTGT-G
* * *
372878 GCTTTTAAAAAGGTTGCTAACAACTCGTGTG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGTG
** *
372909 GC-TTTGAAATGGTTATCACCAACTCTTGTG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGTG
** * *
372939 GACTTTCAAAAAGGTTACCACCAATTCGTGTGG
1 G-CTTT-TGAAAGGTTGCCACCAACTCGTGT-G
* *
372972 GCCTTTGAAAAGGTTGCCATCAACTCGTGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * * *
373004 GCTTTTAAAAGTGCTACCAACAACTTGTGTGG
1 GCTTTTGAAAG-GTTGCCACCAACTCGTGT-G
* * ** *
373036 GCTTTTGAAAAGGTTGACACCAGCTTATATG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
** *
373067 GACTTTAAAAAGGTTGCCACCAATTCGTGTGG
1 G-CTTTTGAAAGGTTGCCACCAACTCGTGT-G
* * * *
373099 GCTTTTGAAATGGTTACCATCAACTCATATAG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* * * *
373131 ACTTTTAAAAATGTTACCACCAACTCGTGTAG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGT-G
* ** * * *
373163 AC-TACGACTATGG-TGCTACAAACTCGTGTG
1 GCTTTTGA--AAGGTTGCCACCAACTCGTGTG
* ** * *
373193 AACTTTAAAAAGGTTACCACCAACTCCTGTGG
1 -GCTTTTGAAAGGTTGCCACCAACTCGTGT-G
* * * * *
373225 GCTTTTAAAAAGATTACCACCAACACATGTAG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGT-G
* * * *
373257 GTTTTTGTAAAAGTTGCCACTAACTTGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
373288 AGCTTTTAAAAAGGTTGCCAACAACTCGTGTAG
1 -GCTTTT-GAAAGGTTGCCACCAACTCGTGT-G
373321 GC-TTTGAAAAAGGTTGCCACCAACTCGTGTG
1 GCTTTTG--AAAGGTTGCCACCAACTCGTGTG
* * * **
373352 GACTTTTGACAATGTTGCCACCAAGTCATGCAA
1 G-CTTTTGA-AAGGTTGCCACCAACTCGTG-TG
* * * *
373385 AC-TTTGAAATGGTTGGCTCCAACTTGTGTGGGTTTTTG
1 GCTTTTGAAA-GGTTGCCACCAAC-T-CGT--G----TG
* * *
373423 GACTTTTGAAAAGGTTACCACTATCTCGTGTG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * ** *
373455 AAC-TTTGAAAAGGTTGACATTAAGTCGTGTGG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
** * * * *
373487 GCTTTAAAAAAAGTTGCGAGCAACTCGTGTCC
1 GCTTT-TGAAAGGTTGCCACCAACTCGTGT-G
* *
373519 GCTTTTGAAAAGGTTGCTACCAACTCATGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
*
373551 GCTTTTGAAAATGTTGCCACCAACTCGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
***
373582 GAC-TTTGACTTTGTTGCCACCAA-TCTGTGTG
1 G-CTTTTGA-AAGGTTGCCACCAACTC-GTGTG
* ** * *
373613 GAC-TTTGACTATGG-TGCTGCCAACTTGTATAG
1 G-CTTTTGA--AAGGTTGCCACCAACTCGTGT-G
* **** * *
373645 ACTACAAAAAGGTTACCAGCAACTCGTGTGG
1 GCTTTTGAAAGGTTGCCACCAACTCGTGT-G
* *** *
373676 GCTTTTGAAA-ATATTATACCCAATTCGTGTG
1 GCTTTTGAAAGGT-TGCCA-CCAACTCGTGTG
* **
373707 GAC-TTTGACTATGG-TGCCATAAACTCGTGTG
1 G-CTTTTGA--AAGGTTGCCACCAACTCGTGTG
* *
373738 AAC-TTTGTAAAGGTTGCCTCCAACTTC-TGTGG
1 -GCTTTTG-AAAGGTTGCCACCAAC-TCGTGT-G
* * *
373770 GCTTTTGAAAAGGTTGCCAACAACTCATTTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
** *
373802 GC-TTTGAAAATCCTTG-CACCAACTTAG-GTAG
1 GCTTTTG-AAA-GGTTGCCACCAAC-TCGTGT-G
*
373833 ACTTTTGTAAAAGG-TGCCACCAACTCGTGTAG
1 GCTTTTG--AAAGGTTGCCACCAACTCGTGT-G
* * * * *
373865 GCTTTTGAAAAGATTACCACGAACTCATATGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
** * * * ** *
373897 GCCATCGAAAAAGATGTTACCAACTCATGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
373929 GATTTTGAAAAGGTAT--TACCAACTCAAGTG-G
1 GCTTTTG-AAAGGT-TGCCACCAACTC--GTGTG
* * *
373960 GATTTTAAAAGGGTTGCCACCAACTCGTATGG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* *
373992 GCTTTTGAAAAGGTTGCCAACAACTCATGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * * *
374023 GATTTTGAAAAGTTTGTCACCAACCCATGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * * * *
374055 GATTCTGAAAAAGTTTCCAACAACTTGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * *
374086 TAC-TTTGAAAAGGTTGTCACCAACAC-TATG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * *
374116 TGTTTTTGAAAAGATTGCTACCAACTCATGTG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
374148 TGATTTTGAAAAGGTTGTCACCAATTCGTGTGG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
** * **
374181 GCTTTTGAAAAGGTTGCCAATAATTTATGTTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTG-TG
* * *** * * * **
374213 AC-TTTGAAAAGTTTATTACTAACTTGCGACA
1 GCTTTTG-AAAGGTTGCCACCAACTCGTG-TG
*
374244 GCTTTTAAAAAGGTTTGCCACCAACTC-TCGTAG
1 GCTTTT-GAAAGG-TTGCCACCAACTCGT-GT-G
* *
374277 ACTTTTGAAACGGTTGCCACTAACTCATGTGGGCTTTTGG
1 GCTTTTGAAA-GGTTGCCACCAACTC--GT--G----T-G
* * *
374317 GCTTTTAAAAAGGTTGTCACTAACAT-GTGTG
1 GCTTTT-GAAAGGTTGCCACCAAC-TCGTGTG
* * *
374348 GATTTTGAAAAAGTTGCCATCAA-TGCGTGTGG
1 GCTTTTG-AAAGGTTGCCACCAACT-CGTGT-G
* * *
374380 GCTTTAAT-TAAGGCTGCTACCAACTCGTGTG
1 GCTTT--TGAAAGGTTGCCACCAACTCGTGTG
* * *
374411 AGCTTTTGAAATGGTTCCCATCAA-TCATGTGG
1 -GCTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* **
374443 GCTTTTGAAAATGTTGCCACTTACTCGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* ** * *
374474 GAC-TTTGACTATGG-TGCCACCAACTTTTATAA
1 G-CTTTTGA--AAGGTTGCCACCAACTCGTGT-G
* *
374506 AC-TTTGAAAAGGTTGCCACCAACTAGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * **** *
374536 AACTTCTGAAACTGTTGGGCTTTGAA-T-ATG-G
1 -GCTTTTGAAA-GGTT--GCCACCAACTCGTGTG
*** * * **** * ***
374567 TGC--CACAAA-CTCG-TGTGAACT-TTAAA
1 -GCTTTTGAAAGGTTGCCACCAACTCGTGTG
**** * *
374593 AAGGTT-ACCA-----CCAACTCAA---GTGGG
1 GCTTTTGA-AAGGTTGCC-AC-CAACTCGTGTG
** ** * *
374617 CTTTTAAAAAGGTTGCTACCAACTCGTATG
1 GCTTTTGAAAGGTTGCCACCAACTCGTGTG
* * ** *
374647 GATTTTTCAAAATATTACCACCAACTTGCGTG-G
1 G-CTTTT-GAAAGGTTGCCACCAAC-T-CGTGTG
* * * *
374680 GCCTTTGAAAAGTTGCTACCAACTCATGTAG
1 GCTTTTGAAAGGTTGCCACCAACTCGTGT-G
* **
374711 GATTTT-AAAAATACTGCCACCAACTCGTGTGG
1 GCTTTTGAAAGGT--TGCCACCAACTCGTGT-G
* ** ** *
374743 GATTTTGAAAAGGTTATCACCAACTTTTATGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
** * *
374775 GCTTTTGAAAAGGTTGTTAACAACTTGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
374806 GAC-TTTGAAAAGGTTGTCACCAACTCGGGTGG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * **
374838 GCTTTTGAAAAGGTTACCACCGATTATTGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
** * * *
374870 AATTTTAAAAAGGTTGCCACTAACTCGTCTAG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGT-G
* * * * * * *
374902 AC-TTTAAAATGATTGCTACTAATTTGTGTGGGCTTTTAG
1 GCTTTTGAAA-GGTTGCCACCAA-CT-CGT--G----T-G
* *
374941 GCTTTTGAAAAGGTTGTCACCAACTCTTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * *
374972 GACTTTTGAAAATGTTACCACCAACTTACGCG-A
1 G-CTTTTG-AAAGGTTGCCACCAAC-T-CGTGTG
* * * * *
375005 GATTTTAAAAAAGTTGTCACCAGCTCGTGTG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGTG
* * * * * *
375036 GAATTTTTAAAAAGTTGCAAACAACTTGTGTG
1 G--CTTTTGAAAGGTTGCCACCAACTCGTGTG
* * *
375068 GACTTTTGAAAGGTTACCACAAACTCATGTAG
1 G-CTTTTGAAAGGTTGCCACCAACTCGTGT-G
* * * * *
375100 GCCTTTGAAAATGTTTCTACCAACACGTGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * **
375132 GATTTTGAAAAGGTTACCACCAACTCTTGCAA
1 GCTTTTG-AAAGGTTGCCACCAACTCGTG-TG
* * * *
375164 GATTTTGAAAAAGTTGTCACCAACTCGTTTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* **
375196 GCTTTTGAAAAGATTGTTACCAACTCGTGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * **
375228 GCTTTTGAAAAGGTTACCACCAACTCTTACAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGT-GTG
* *
375260 ACTTTTCAAAAGGTTGCCACCAACTCGTGTG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGTG
* * ** *
375291 GAC-ATTGAAATAGTTGCTTCCAACTCTTGTGG
1 G-CTTTTGAAA-GGTTGCCACCAACTCGTGT-G
*
375323 GCTTTTGAAAAGGTTGCCACCAACTCTTGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
375355 ACTTTTGAAAGGTTGCC-CCTAACTGGTGTG
1 GCTTTTGAAAGGTTGCCACC-AACTCGTGTG
375385 GAC-TTTGAAATGGTTGCCACCAACTCGTGTAG
1 G-CTTTTGAAA-GGTTGCCACCAACTCGTGT-G
** * * *
375417 GCATTTAAAAAGGTTACCACCAACACGTATAG
1 GC-TTTTGAAAGGTTGCCACCAACTCGTGT-G
* * *
375449 GCTTTTGAAAAGGTTACTACCAACTCATGT-
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * * * *
375479 ACACTTTGACTATGG-TGCCACAAACCCATGTG
1 GC-TTTTGA--AAGGTTGCCACCAACTCGTGTG
* * *
375511 AAC-TTTGAAAAGGTTACCACCAACTCTTGTAG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * * *
375543 GTTTTTAAAAAGGTTACCACCAATTTGTGTGG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGT-G
* * *
375575 GTTTTTGTAAAAGTTGCCAGCAACTCGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
375606 AGCTTTTAAAAAGGTTACCACCAACTCGTGTG
1 -GCTTTT-GAAAGGTTGCCACCAACTCGTGTG
** * *
375638 GACTTTTGAAAATATTGCCAACAACTGGTGTG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
** * * * *
375670 GACTTTCAAAAGGATGTCACCAACTTGTATG
1 G-CTTTTGAAAGGTTGCCACCAACTCGTGTG
* * *
375701 AGCTTTTGAAAAGGTTGCTATCAACTCATGTG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * * *
375733 GAATTTTGAAAAGATTGTCACCAACTTG-GAAG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTG-TG
* **
375765 AGCTTTTGAAAAGGTTGCCAACAACTTATGTG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
375797 GATTTTGAAAAGGTTGTCACTAACTCGTGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
** * *
375829 GCTTTTGAAAAGGTTGTGACCAGCTC-TCATAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGT-GT-G
* *
375861 ACTTTTGAAAAGGTTGCCACCAACTCATGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * * *
375892 CACTTTTAAAAAGGTTGCCAACAACTTGTGTTA
1 -GCTTTT-GAAAGGTTGCCACCAACTCGTG-TG
* * *
375925 AC-TTTGAAAAGGTTGTCACTAACTCGTGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
375956 GCTTTTGAAAAGGTTACCACCAACTC-TCGTAA
1 GCTTTTG-AAAGGTTGCCACCAACTCGT-GT-G
* * * *
375988 ACTTTTAAAAAGGTTACCACCAACTCTAATGGGCCTTTCG
1 GCTTTT-GAAAGGTTGCCACCAACTC------G--TGT-G
376028 GCTTTTGAAAAGGTTGCCACCAACTCGTGT-
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
** * * *
376058 GCACATTGAAAATGTTGCCATCAACTTGTGTGG
1 GC-TTTTG-AAAGGTTGCCACCAACTCGTGT-G
** *
376091 GCTTTTGAAAAGGTTGCCTTCAACTCATGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
376123 GCTTTTGAAAATGTTGCCACCAACTTGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * * ** *
376154 GAC-TTTGACTATGG-TACCACAAATTTTTATAG
1 G-CTTTTGA--AAGGTTGCCACCAACTCGTGT-G
*
376186 AC-TTTGAAAAGGTTGCCACCAACT-GTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* ** * * **** * *
376215 AACTTCTAAAAATGTTAGACTTTGACT-ATGATACAA
1 -GCTT-TTGAAAGGTT-GCCACCAACTCGTG-T---G
* ** ** **
376251 ACTCGTGTAAACTTTG--A--AA-AGGT-TG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *** * ** * *
376276 CCACCAACTCAAGCGAGGTTTTAAAAAGTTAGCCACCAAC-TCG-G
1 ---GCTTTTGAA---AGG--TT-----GCCA-CCAAC-TCGT-GTG
** ** **** ** * *
376320 ATTGATTTTTAAAAAGGTTATC-AC-C----A
1 GCT--TTTGAAAGGTTGCCACCAACTCGTGTG
* * ** * ***
376346 ACTTATG-TGGGCTT-TCA--AAAAAGT-T-
1 GCTTTTGAAAGG-TTGCCACCAACTCGTGTG
*** ** * ** * ***
376371 GC-TACCAATTCGTGTG--A-GATTTTGAAAAG
1 GCTTTTGAA-AGGT-TGCCACCAACTCG-TGTG
* *** *
376400 G---TT-ACCA-----CCAACTCGTGT-GGGAT-
1 GCTTTTGA-AAGGTTGCC-AC-CAACTCGTG-TG
* *** * *** *
376423 -TTTGAAAAGGTTGCCACCAACTC-A-T-ATG-G
1 GCTTTTGAAAG--GTTGCC-AC-CAACTCGTGTG
* * * *
376452 ACTTTTGAAAAAGTTGCCAACAACTAGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * *
376483 GAC-TTTGAAAAAGTTGTCACTAACTCGTGTAA
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
376515 GCTTTTGCAACGGTTGCCACCAATTCTTGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
*
376547 ACTTTTGAAAAGGTTGCCACCAACTCGTGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
376579 G-GTTTGAAATGGTTGCCAACAATTCGTGTGGGCTTTTGG
1 GCTTTTGAAA-GGTTGCCACCAACTC--GT--G----T-G
* *
376618 GCTTTTGAAAAGGTTGCCATCAACTCTTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
376649 GACTTTTGAAACGTTGCCATCAACTCATGTG
1 G-CTTTTGAAAGGTTGCCACCAACTCGTGTG
* * * *
376680 GAC-TTTGAAATAGTTACAACCAACTTGTGTG
1 G-CTTTTGAAA-GGTTGCCACCAACTCGTGTG
* * * *
376711 GATTTTTAAAAAGGTTACCACCAACTTGTGTG
1 G-CTTTT-GAAAGGTTGCCACCAACTCGTGTG
** * *
376743 AATTTTTGAAAAGGTTGCCATCAACTCCTGTCG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
376776 ACTTTTGAAAAGGTTACCAACAACTCGTTTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
376808 GC-TTTGAAAAAGTTTCCACCAACTCATGCG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* ** * *
376838 GCCATTTGCAAACCATAG-CACCAACTCGTATAG
1 G-CTTTTG-AAA-GGTTGCCACCAACTCGTGT-G
* * *
376871 GCTTTTGAAAAGGTTGCTACTAACTCATGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
376903 GATTTTGAAAGTTTGCCACAAACTCGTGTTG
1 GCTTTTGAAAGGTTGCCACCAACTCGTG-TG
** *
376934 AATTTTGAAAAGGTTGCCACCAACTCATGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* **
376966 GCTTTTGAAAAGGTTGCCAACAACTTTTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * *
376997 GAC-TTTGAAAAGGCTACTACCAACTCATGTAG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
377029 GCCTTTGAAAAGGTTGCCATCAACTCATGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
377060 AGTTTTTGAGAATGTTGCCACCAACTCGTGTG
1 -GCTTTTGA-AAGGTTGCCACCAACTCGTGTG
** * ** *
377092 GAC-TTCCACTATGG-TGCCACCAACTTTTATAG
1 G-CTTTTGA--AAGGTTGCCACCAACTCGTGT-G
* ** *
377124 AC-TTTGAAAAGGTTGCCACCAACTTATGTAA
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * * *** *
377155 GCTTCTGAAAATGCTAGACTTTAACT-ATGGTG
1 GCTTTTG-AAA-GGTTGCCACCAACTCGT-GTG
* * * * *
377187 CCACAAACTTGTGTGAACTTTGAAAAAGTTACCACAAACTGGTGTAG
1 ------GCTT-T-TGAA--------AGGTTGCCACCAACTCGTGT-G
* * * *
377234 G-ATTTGAAAAGGTTGCCCCCAATTCGTGCGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTG-TG
* *
377265 GC-TTTGAAAAGGTTGCC-CTCAACTCATTTGG
1 GCTTTTG-AAAGGTTGCCAC-CAACTCGTGT-G
* * * *
377296 GC-TTTGAAAAGGTTACCATCAACTAGTGTA
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * * *
377326 GCATTTTAAAAAGGCTACCAACAACTTGTGTGG
1 GC-TTTT-GAAAGGTTGCCACCAACTCGTGT-G
* * *
377359 GCTTTTGAAAAGGTTGCCACCAATTCATATG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
** * *
377390 GACTTTCAAAAGGTTGCCACTAACTCGGGTGG
1 G-CTTTTGAAAGGTTGCCACCAACTCGTGT-G
* *
377422 GCTTTTAAAAAGGTTGCCACCAACTCGTATAG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGT-G
* * * *
377454 ACTTTTGAAAATGTTACCACCAACTCATGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * *
377485 GAC-TTTGACTATGG-TGTCACAAACTTGTGTG
1 G-CTTTTGA--AAGGTTGCCACCAACTCGTGTG
* * **
377516 AAC-CTTGAAAAGGTTGCTGCCAACTCGTGTGG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
377548 GCTTTTAAAAAGGTTCCCA-CAACTCGTGTG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGTG
* * * *
377578 GGTTTTAAAAAGGTTGCCACCAACTCATATGG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGT-G
* * *
377610 GCTTTTGAAAAGATTGCCAACAACTCGCAG-G
1 GCTTTTG-AAAGGTTGCCACCAACTCG-TGTG
377641 AGC-TTTGAAAAGGTTGCCACCAACTCGTGTG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
377672 GCCTTTTGAAAAGGATACCACCAACTCGTTTGG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
377705 GCTTTTGAAAAGGTT-CCTACCAACTCATGCAG
1 GCTTTTG-AAAGGTTGCC-ACCAACTCGTG-TG
* * * *
377737 GATTTTGAAA---TGCCATCAACTCATGTCA
1 GCTTTTGAAAGGTTGCCACCAACTCGTGT-G
* * ** * * *
377765 GATTTTGAAAAAGTTTTCTCCAACTCTTCTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
377797 GCTTTTATAAATGTTGCCAACAACTTGTGTG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGTG
*
377828 GAC-TTTGAAAAGGTTACCACCAACTCGTGTG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * **** *
377859 AGCTTCTGAAAATGTTAGACTTTGACT-ATG-G
1 -GCTTTTG-AAAGGTT-GCCACCAACTCGTGTG
** * **
377890 TGC-CAT-AAA--CT--CATGTGAACT--T-T-
1 -GCTTTTGAAAGGTTGCCA--CCAACTCGTGTG
**** *** *** ***** *
377913 G-AAAAG-GTTGCCCCCAATTTGT-GTGGG
1 GCTTTTGAAAGGTTGCCACCAACTCGTGTG
** *** * * **
377940 CTTTGAAAAGGTTGCCCCTAACTC-A-T-GTG-G
1 GCTTTTGAAAGGT-TGCC--AC-CAACTCGTGTG
* ** * *
377970 ACTTTGAAAAGGTTGCCATCAACTCATGTGG
1 GCTTTTGAAAGGTTGCCACCAACTCGTGT-G
* * ** * * *
378001 GCTTTTAAAAAAGCTT-CCAATAGCACGTGCAG
1 GCTTTT--GAAAGGTTGCCACCAACTCGTG-TG
* * * * *
378033 TCTTTTGAAAAGGTTGCCATCAAGTCATATG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
** *
378064 GACTTTAAAAAGGTTGCCACCAATTCGTGTGG
1 G-CTTTTGAAAGGTTGCCACCAACTCGTGT-G
* * *
378096 GCTTTTGAAATGGTTGCAATCAACTTGTGTAG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* * * * * *
378128 ACTTTTTAAAATGTTACCACTAACTCTTGTG
1 GC-TTTTGAAAGGTTGCCACCAACTCGTGTG
* * * *
378159 GAC-TTTGACTATGG-TGCCACAAACTTGTGCG
1 G-CTTTTGA--AAGGTTGCCACCAACTCGTGTG
* * * * *
378190 AAC-TTTGAAAAAGTTGTCGCCAAATCGTGTGG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
378222 GCTTTTAAAAAGGTTGCCACCAACTCTTGTG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGTG
* * *
378253 GGTTGTTGAAAAAGTTGCCACCAACTCTTGTGG
1 GCTT-TTG-AAAGGTTGCCACCAACTCGTGT-G
** * * **
378286 GCTTTCAAAAAGGTTGCCAACAACTCATGCA
1 GCTTT-TGAAAGGTTGCCACCAACTCGTGTG
** * *
378317 GC-TTTGAAAAGGTTTTCACCGACTAGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
378347 GACTTTTGAAAATGTTACCACCAACTCGTATGG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * * *
378380 GCCTTTGAAAAGATTGCCCCCAATTCATGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
** *
378411 GAC-TTTGAAAAGGTTATCATCAACTCGTGTG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * * *
378442 GACTTTTAAAAAGGCTACCGA-CAATTTGTGTGG
1 G-CTTTT-GAAAGGTTGCC-ACCAACTCGTGT-G
* * *
378475 GCTTTTGAAAAGGTTACCACCAACTCATATG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* ** * * *
378506 AACTTTAAAAAGGTTGCCACTAATTCTTGTGG
1 -GCTTTTGAAAGGTTGCCACCAACTCGTGT-G
* * *
378538 GCTTTTGAAATGGTTGCCATCAACTCCTGTCA
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* * * * * *
378570 ACTTTTAAAAACGTTACCACTAACTTGTGTAG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGT-G
* * * *
378602 AC-TTTGATTATGG-TACCACAAACTCGTGTG
1 GCTTTTGA--AAGGTTGCCACCAACTCGTGTG
* * * *
378632 AAC-TTTGAAAAGGTTACCACTAACTCGAGTGG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* **
378664 GCTTTTAAAAAGGTTATCACCAACTCGTGTGG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGT-G
* * * *
378696 GTTTTTGTAAAAGTTGCCAACAACTTGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
378727 AGCTTTTAAAATGGTTGCCAACAACTTGTGTG
1 -GCTTTTGAAA-GGTTGCCACCAACTCGTGTG
378759 GAC-TTTGAAAAGGTTGCCACCAACTCGTGTG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
** * *
378790 GACTTTTGAAAATATTGCCAACAACTTGTGTG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
378822 GAC-TTTGAAATAGTTGCCACCAACTCATGTAG
1 G-CTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* * *
378854 AG-TTTTGAAAAGGTTGCTACCAACTCATATG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
*
378885 GATTTTTGAAAAGGTTGCCACCAACTCGTGTG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
378917 GACTTTTTATAAGGTTGCCAACAACTCGCGTGG
1 G-CTTTTGA-AAGGTTGCCACCAACTCGTGT-G
*
378950 GC-TTTGAAAAGGTTGCCACCAACTTGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * ** * * *
378980 AACTATTGAAAAAGTTATCACAAACTCATATAG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
379013 GCCTTTGAAAAGGTTGCTACCAACAT-GTATG
1 GCTTTTG-AAAGGTTGCCACCAAC-TCGTGTG
* * ** *
379044 TGATTTTGAAAAGGTTACCACCAACTAATGCG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * **
379076 AGATATTGAAAAAGTTATCACCAACTCGTGTGG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
379109 GCTTTTGAAAAGGTTGCCAACAACTTGTGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* **
379141 AC-TTTGAAAAGGTTGTTACCAACTCGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
379171 GACTTTTGTAAAGGTTACTACCAACTCTTGTAG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
379204 ACTTTTCAAAAGGTTACCACCAACTCATGTG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGTG
* * * ** ** *
379235 GATATTGAAATAGTAACTTCCAACTCTTATGGGCTTTTGG
1 GCTTTTGAAA-GGTTGCCACCAACTC------G--TGT-G
* *
379275 GCTTTTGAAAAGGCTGCCACCAACTCTTGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
379307 ACTTTTGAAAGGTTGCCATCAACTCATGTG
1 GCTTTTGAAAGGTTGCCACCAACTCGTGTG
* *
379337 GAC-TTTCAAATGGTTGCCACCAACTCATGTGG
1 G-CTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* * * *
379369 GCTTTTGAAAAAGTTACCACCAGCACGTGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * * *
379401 GTTTTTGAAAAAGTTACTACCAACTC-TATAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * ** *
379432 AC-TTTGACTATGG-TGCTGCAAACTCGTGTG
1 GCTTTTGA--AAGGTTGCCACCAACTCGTGTG
* * * ** * *
379462 AAC-TTTGAAAAGATTACCAATAACTCCTATGG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
379494 GCTTTTACAAAGGTTACCACCAACTCATTTG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGTG
* * *
379525 ACTTTTTGTAAAAGTTACCACCAACTCGTGTGG
1 GC-TTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
379558 GCTTTTAAAAAGGTTGCCAACAACTCATGCAG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTG-TG
*
379590 GC-TTTGCAAAGGTTGCCACCAACTCATGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
379620 GACTTTTGAAAATGTTGCCAACAACTTGTGTG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * * *
379652 GAC-TTTGAAAAGGTTGTCACCATCTCCTTTAA
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
379684 GCTTTTGAAAAGGTTGCTACCAACTCATGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
379716 GATTTTGAAAAGGTTGCCACCAACTTGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * **
379747 AGCTTTTGAAAAGGTTGCTAACAACTTATGTG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
** * * *
379779 GAC-TTAAAAAGGTTGTCACCAATTCATGTG
1 G-CTTTTGAAAGGTTGCCACCAACTCGTGTG
* * * *
379809 GATTTTTCAAAAGGTTGCGACCAATTCTCGT-AG
1 G-CTTTT-GAAAGGTTGCCACCAA--CTCGTGTG
* *
379842 ACTTTTGAAAAGGTTGCTACCAACTCGTGTGGGCTTTTGG
1 GCTTTTG-AAAGGTTGCCACCAACTC--GT--G----T-G
* * *
379882 GCTTTTGAAAGGTTGCTATCAACTCATGTG
1 GCTTTTGAAAGGTTGCCACCAACTCGTGTG
* * * *
379912 GACTTTGGAATGATTACCACCAACTCGTGTGG
1 G-CTTTTGAAAGGTTGCCACCAACTCGTGT-G
* *
379944 GCCTTTTAAAAGGTTACCACCAACTCGTGTAG
1 G-CTTTTGAAAGGTTGCCACCAACTCGTGT-G
*
379976 AC-TTTGAAAAGGTTGCCACCAACTCGTGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * **
380007 G-TAATTGAAAAAGTTACCACCAACTCACGTAG
1 GCT-TTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
380039 GCTTTTAAAAATGTTGACAACAACTCGTGTG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGTG
** *
380070 GC-TTTGAGAAGGTTATCACCAACTCGTATG
1 GCTTTTGA-AAGGTTGCCACCAACTCGTGTG
* *
380100 GACTTCTTAAAAGGTTACCACCAACTCGTGTG
1 G-CTT-TTGAAAGGTTGCCACCAACTCGTGTG
* ** * ** *
380132 GCTTTTGAAAAGGCTGTTACGAACTTATATGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* ** * * *
380164 GATATTAAAAATGTTGCCATCAACTCATGTG
1 GCT-TTTGAAAGGTTGCCACCAACTCGTGTG
* ** *
380195 AGATTTTGAAAAGGTTGCTGCTAACTCGTGTGG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
380228 GCTTTTGACAAAGTTGCTACCAACTCTTATAG
1 GCTTTTGA-AAGGTTGCCACCAACTCGTGT-G
* * * *
380260 ACTTTTGAAAAAGTTGCCATCAACTCTTGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
380292 GC-TTTGAAATGGTTACCACAAATTTGTGTGG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* ** **
380323 GCTTTTGGACTATTGAAAAGGTTGCTACCAACTTTTACAG
1 GC---T----T-TTG-AAAGGTTGCCACCAACTCGT-GTG
* * ** * *
380363 ACTTTTGAAAGGTTGCTATTAATTCATGT-
1 GCTTTTGAAAGGTTGCCACCAACTCGTGTG
* * *
380392 GCACTTTGAAATAGTTGCCACCAACTTGTGTG
1 GC-TTTTGAAA-GGTTGCCACCAACTCGTGTG
** * ** *
380424 AATTTTTTAAAAGGTT-CTTGCCAACTCGTCTG
1 --GCTTTTGAAAGGTTGC-CACCAACTCGTGTG
* *
380456 GATTTTTGAAAAGGTTGCCACCAACTCCTGTCG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
380489 GCTTTTGAAAAGGTTGCCAACAACTCATTTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
380521 GC-TTTGAAAAAGTTGTCACCAACTTGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * *
380551 CCCATTTGCAAAGCTTACCACCAACGT-GTGTAG
1 -GCTTTTG-AAAGGTTGCCACCAAC-TCGTGT-G
* * *
380584 GCTTTTAAAAAGGTTGCTACCAACTCGTGCAG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTG-TG
* * * *
380616 GATTTTGAAAGGTCGTCACCAACTCATGTG
1 GCTTTTGAAAGGTTGCCACCAACTCGTGTG
* **
380646 AGCTTTTAAAAAGGTTGCCAATAACTCGTGTGG
1 -GCTTTT-GAAAGGTTGCCACCAACTCGTGT-G
*
380679 GC-TTTGAAAAGGTTGCTACCAACTCGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
380709 AACTTTTGGAAAGGTTCCCACCAACTCATGTCG
1 -GCTTTT-GAAAGGTTGCCACCAACTCGTGT-G
* * *
380742 GCCTTTGAAAAGGTTGCTACCAACTCATGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
380773 AGCTTTTGAAATGATTGCCACCAACTCTTCTAG
1 -GCTTTTGAAA-GGTTGCCACCAACTCGTGT-G
*
380806 ACTTTTGAAAAGGTTGCCACCAACTCGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
380837 GAC-TTTGAAATGGTTTCCACTAATTCGTGTGGGCTTTTGG
1 G-CTTTTGAAA-GGTTGCCACCAACTC--GT--G----T-G
* *
380877 GCTTTTGAAAAAGTTGCCACCAACTCTTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* ** *
380908 GACTTTTGAAAGGTTGGCATTAACTAGTGTG
1 G-CTTTTGAAAGGTTGCCACCAACTCGTGTG
* * *
380939 GAC-TTTGAAATAGTTAG-CACTAACACGTGTAG
1 G-CTTTTGAAA-GGTT-GCCACCAACTCGTGT-G
** * *
380971 ATTTTTCAAAAGGTTGCCACCAACTCCTGTG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGTG
*
381002 AGCTCTTGAAGAGGTTGCCACCAACTCGTGTG
1 -GCTTTTGAA-AGGTTGCCACCAACTCGTGTG
* * *
381034 GACTTTTGCAAAGGTTGCCACTAACCCAT-TGG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
*
381066 GCTTTTGAAATGGTTACCACCAACTCGTGTG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGTG
* * * * * *
381097 AGCCTTTCAAATGTTACTACCTACTCGTGTAG
1 -GCTTTTGAAAGGTTGCCACCAACTCGTGT-G
* * ** *
381129 GATTTTG--A----GCGACCGGCTCGAGTGG
1 GCTTTTGAAAGGTTGCCACCAACTCGTGT-G
* * *
381154 GATTTTGGAAAGGTTACCACCAACTTGTGTGG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGT-G
* * * *
381186 GTTTTTGAAAAGGTTGCCAACAAGTTGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * ** *
381217 GAC-ATTGAAAAAGTTGTCATTAACTTGTGTG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * ** *
381248 GACTTTTGAAAAAGTTTCTAATAACTTGTGTG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
** * *
381280 GAGTTTGAAAAGGTTGTCACTAACTC-TGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
381310 GTTTTTGAAAAGGTTGCTACCAACTCGTATG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * * **
381341 TGATTTTGAAAAGATTACTACCAACTTATGTGG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * **
381374 GCTTTTGAAAAGGTTGCTAACAACTTATGTTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTG-TG
* ** *
381406 AC-TTTGAAAAGGTTGTTACTAACTCGTGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
381437 GCTTTTTAAAGAAAAGGTTGCCAACTACTTGTGTAG
1 GC-TTTT---G-AAAGGTTGCCACCAACTCGTGT-G
* ** *
381473 AC-TTTGAAAAGGTTGTTACCAACTCATGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
381504 GCTTTTGAAAAGGTTGTCC-CTAACTCTTGTAG
1 GCTTTTG-AAAGGTTG-CCACCAACTCGTGT-G
* * * *
381536 ACTTTTCAAAAGGATGCCACCAACTCGTATG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGTG
* * * **
381567 GAC-ATTGAAATAGTTACTTCCAACTCTTGTGGGCTTTTGG
1 G-CTTTTGAAA-GGTTGCCACCAACTC--GT--G----T-G
* *
381607 GCTTTTGAAAAGGTTGCCACCAACTCTTGTAA
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
381639 ACTTTTGAAAGGTTGCCATCAACTCGTGTAG
1 GCTTTTGAAAGGTTGCCACCAACTCGTGT-G
* * * * *
381670 AC-TTTGACATGGTTGCCGCAAACTCATGTAG
1 GCTTTTGA-AAGGTTGCCACCAACTCGTGT-G
* * * * * *
381701 GCTTTTGAAAAGGTTGCTACTAGCACATGTAC
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
381733 GCTTTTGAAAAAGTTACTACCAACTCCTGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
381765 AC-TTTGACTATGG-TGCCACAAACTCGTGTG
1 GCTTTTGA--AAGGTTGCCACCAACTCGTGTG
* * * *
381795 AAC-TTTGAAAAGGTTACCACTAACTCATGTGG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
381827 GCTTTTAAAAAGGTTACCACCAACTCGTGTG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGTG
* * * *
381858 GGTTTCTGTAAAAGTTACCACCAACTCATGTG
1 GCTTT-TG-AAAGGTTGCCACCAACTCGTGTG
** * *
381890 AAATTTTAAAATGGTTGCCAACAACTCGTGTAG
1 -GCTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* *
381923 GC-ATTGAAAAGGTTGCCACCAATTCGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
** * * * *
381953 GACTTCTAAAAATGTTGCCAACAACTTGTGCG
1 G-CTT-TTGAAAGGTTGCCACCAACTCGTGTG
** *
381985 GAC-TTTGAAAGGGTTGTTAGCAACTCGTGTG
1 G-CTTTTGAAA-GGTTGCCACCAACTCGTGTG
* *
382016 AGCTTTTGAAGAGGTTGCTACCAACTCATGTGG
1 -GCTTTTGAA-AGGTTGCCACCAACTCGTGT-G
* * * *
382049 GATTTTGAAAAGGTTACCACCATCTTGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
** * **
382080 AGCTTTTGGAGTGGTTGCCAACAACTTATGTG
1 -GCTTTT-GAAAGGTTGCCACCAACTCGTGTG
* * *
382112 GATTTTGAAAAGGTTGTCACCAACTCATGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
382143 AGCTTTTGAAAAGGTTGCGACCAACTC---TC
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
382172 G-TTTTGAAAAGGTTACCACCATCTTGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
** * **
382202 AGCTTTTGGAGTGGTTGCCAACAACTTATGTG
1 -GCTTTT-GAAAGGTTGCCACCAACTCGTGTG
* * *
382234 GATTTTGAAAAGGTTGCCACCATCTCATGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* ** **
382265 GAC-TTTGAAAAGGTTGACATTAACTTATGTGG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
** ** * * *
382297 GCTTTAAAAAGAGCAGCGACAAACTCGTGTCT
1 GCTTTTGAAAG-GTTGCCACCAACTCGTGT-G
* * *
382329 GCTTTTGAAAAGGTTGCTACCAATTCATGTCG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
382361 TCTTTTGAAAATGTTACCACCAACTCGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
**** * *
382392 GAC-TTTGACTTTATTGCCACCAACTTGTCTG
1 G-CTTTTGA-AAGGTTGCCACCAACTCGTGTG
* * * * *
382423 GAC-TTTGACTATGG-TACCGCCACACTTGTATAG
1 G-CTTTTGA--AAGGTTGCCACCA-ACTCGTGT-G
* ** * * *
382456 ACTTTAAAAAGATTACCAGCAACTCGTGTGG
1 GCTTTTGAAAGGTTGCCACCAACTCGTGT-G
* **
382487 GCTTTTGAAA-ATATTACATCCAACTCGTGTAG
1 GCTTTTGAAAGGT-TGCCA-CCAACTCGTGT-G
* * * **
382519 AC-TTTGACTATGG-TGCTATAAACTCGTGTG
1 GCTTTTGA--AAGGTTGCCACCAACTCGTGTG
* *
382549 AAC-TTTGTAAAGGTTGCCACCAACTCCTGTGG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
382581 GCTTTTGAAAAGGTTACCAACAACTCGTTTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
382613 GC-TTTGAAA-ATCGTGCCACCAACACATGTG
1 GCTTTTGAAAGGT--TGCCACCAACTCGTGTG
*
382643 CACTTTTGCAAAAGG-TGCCACCAACTCGTGTG
1 -GCTTTTG--AAAGGTTGCCACCAACTCGTGTG
* ** *
382675 CGCTTTTGAAAAGGTTACCACCAACTTATCTG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
382707 AGATTTTGAAAAGG-TGCTACCAACTCGAGTG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * * *
382738 AGATTTTAAAAGGGTTGTCACAAACTTGTGTG
1 -GCTTTTGAAA-GGTTGCCACCAACTCGTGTG
* * * *
382770 AGCTTTTGAAAAGGTTGCGAACAACTTGTATG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * * *
382802 GATTTTGAAAAAGTTGTCATCAACCCGTGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
382834 GCTTTTGAAAAAGTTTCCAGCAACTTGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
382865 GAC-TTTGAAAAAGTTGTCACCAACAC-TGTGG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
382896 GTTTTTGAAAAGATTGCTACCAACTCATGT-
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
382926 GCTATTTTGAAAAGGTTGCCACCAACTCGTGTAG
1 GC--TTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * * **
382960 ACCTTCGAAAGGTTGCCAACAACTTATGTTG
1 GCTTTTGAAAGGTTGCCACCAACTCGTG-TG
* ** * * **
382991 AC-TTTGAAAAGGTTGTTACTAACTCGCGACA
1 GCTTTTG-AAAGGTTGCCACCAACTCGTG-TG
* **
383022 GCTTTTGAAAAGGTTACTGCCAACTCGTGTAGGCTTTTAG
1 GCTTTTG-AAAGGTTGCCACCAACTC--GT--G----T-G
*
383062 GCTTTTGAGAAGGTTGCCACTAACAT-GTGTG
1 GCTTTTGA-AAGGTTGCCACCAAC-TCGTGTG
** **
383093 GAC-TTTGAAAAGGTTGCCATTAAGACGTGTGG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
** * * *
383125 GCTTTAAATAAGGCTGCTACCAACTCATGTGG
1 GCTTTTGA-AAGGTTGCCACCAACTCGTGT-G
* *
383157 GCTTTTGAAAATGTTGCCACTAACTCGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* ** * *
383188 GAC-TTTGACTATGG-TGCCACCAACTTTTATAA
1 G-CTTTTGA--AAGGTTGCCACCAACTCGTGT-G
* *** * *
383220 ACTTCAAAAAGGATGCCATCCAACTAGTGTG
1 GCTTTTGAAAGGTTGCCA-CCAACTCGTGTG
* * ** *
383251 AGCTTTTGAAAATGTTG-GACTTTGACT-ATG-G
1 -GCTTTTG-AAAGGTTGCCAC--CAACTCGTGTG
*** *
383282 TGC--CACAAACGCGTGTG-----AA---GT-TT
1 -GCTTTTGAAA-G-GT-TGCCACCAACTCGTGTG
**** * *** * *
383305 G-AAAAGATTA--CCACCAACCCA-T-GAAG-G
1 GCTTTTGA-AAGGTTGCC-ACCAACTCG-TGTG
** ** *
383332 CTTTTAAAAAGGTTGCCAACAACTCGTGTAG
1 GCTTTTGAAAGGTTGCCACCAACTCGTGT-G
** * * * *
383363 AATTTTGAAAATGTTACAACCAACTCATGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * * *
383395 GCCTTTGAAATGGTTGCTACCAATTCGTTTAA
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* * * *
383427 GATTTTGAAAAAGTTACCACCAACTCATGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
383459 GATTTTGAAAAGGTTACCACCAACTCATTTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
383491 GCTTTTGAAAATGTTGCCAACAA-T-GT-TG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * *
383519 AC-TTTGAAAAAGTTGTCACCAACTCGGGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
**
383550 GCTTTTGAAAAGGTTGCCACCAACTATTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* ** * *
383581 GAATTCTAAAAAGGTTACCACTAACTCGTGTAG
1 G-CTT-TTGAAAGGTTGCCACCAACTCGTGT-G
* * *
383614 AC-TTTGAAATGGTTGTCACCAATTCGTGTGGGTTTTCAG
1 GCTTTTGAAA-GGTTGCCACCAACTC--GT--G---T--G
*
383653 GCTTTTGAAAAGGTTGCCACCAACTCTTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* ** * **
383684 GAC-TTTGAAAGGTTGTCGTCAACTCTTACAG
1 G-CTTTTGAAAGGTTGCCACCAACTCGT-GTG
* * * *
383715 AC-TTTGAAATAGTTGCCACTAACTCATGT-
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGTG
* *
383744 ACAGTTTTGAAAAGGTTGCTACCAACTCGTGTGG
1 GC--TTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
383778 GTTTTTGAAAAGGTTGCTACCAACTCATGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
383809 GACTTTTTATAAGGTTGCCAACAACTCACGTG-G
1 G-CTTTTGA-AAGGTTGCCACCAACT--CGTGTG
*
383842 GC-TTCGAAAAGGTTGCCACCAACTCGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* ** ** *
383872 GACTATTGAAAAGGTTATCATAAACTCGTGGAG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGT-GTG
* * *
383905 GCCTTTGAAAAGGTTGCTACCAACAT-GTATG
1 GCTTTTG-AAAGGTTGCCACCAAC-TCGTGTG
* * * * * * *
383936 TGATTTTGAAAAGGTTACCTCTAATTCATGCG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * ** *
383968 AGATTTTGAAAAAGTTATCACCAACTTGTGTG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
384000 AGCTTTTAAAAAGGTTGCCAACAACTTGTGTAG
1 -GCTTTT-GAAAGGTTGCCACCAACTCGTGT-G
* ***
384033 AC-TTTGAAAAGGTTATTACCAACTCGTGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
384064 GCTTTTGAAAAGGTTACTACCAACTCTTGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
384096 ACTTTTCAAAAGGTTGCCACCAACTCATGTAG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGT-G
* * * * ** * *
384128 AC-ATTGAAATAGTGGCTTCCAACTTTTATGGGCTTTTGG
1 GCTTTTGAAA-GGTTGCCACCAAC-----T---CGTGT-G
* * *
384167 GCTTTTAAAACGGATGCCACCAACTCTTGTAG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* * **
384199 ACTTTTGAAAGGTTGCCATCAACTTATGTG
1 GCTTTTGAAAGGTTGCCACCAACTCGTGTG
* * *
384229 GAC-ATTCAAATGGTTGCCACTAACTCGTGTGG
1 G-CTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* * *
384261 GCTTTTGAAAAGGTTACCATCAACACGTGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
384293 GCTTTTGAAAAAGTTACTACCAACTCATGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
384325 AC-TTTGACTATGG-TGCCACAAACCCGTGTG
1 GCTTTTGA--AAGGTTGCCACCAACTCGTGTG
* * * ** * *
384355 AAC-ATTGAAAAGGTTACCAGTAACTCCTATGG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
384387 GCTTTTAAAATGGTTACCACTAACTTGTGTG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGTG
*
384418 GCTTTTTGTAAAAGTTGCCACCAACTCGTGTG
1 GC-TTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
384450 AGCTTTTAAAAAGGTTGCCAACAACTCGTGTAG
1 -GCTTTT-GAAAGGTTGCCACCAACTCGTGT-G
*
384483 GC-TTTGAAAAGGTTGCCACCAACTCATGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * **
384513 GACTTTTGAAAATGTTGCCAACAACTTATGTG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
384545 GAC-TTTGAAAAGGTTGTCACCAACTCCTGTG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
384576 AGCTTTTGAAAAGGTTGCTACCAACTCATGTG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * *
384608 GATTTTGAAAAGGTTGCCACTAACTTGTATG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
** **
384639 AGCTTTTGGAAAGGTTGCCAATAACTTATGTG
1 -GCTTTT-GAAAGGTTGCCACCAACTCGTGTG
** * *
384671 GACTTTAAAAAGGTTGTCATCAACTCGTGTGG
1 G-CTTTTGAAAGGTTGCCACCAACTCGTGT-G
** * *
384703 GCTTTTGAAAAGGTTGTGACCAACTTTCAT-AG
1 GCTTTTG-AAAGGTTGCCACCAAC--TCGTGTG
* * *
384735 ACTTTTGAAAAGGTTACCACCAACCCGTGTAGGCTTTTGG
1 GCTTTTG-AAAGGTTGCCACCAACTC--GT--G----T-G
* *
384775 GCTTTTGAAAGGTTGCTATCAACTCGTGTAG
1 GCTTTTGAAAGGTTGCCACCAACTCGTGT-G
* * *
384806 AC-TTTGAAATGATTACCACCAACTCGTGTCG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* * * *
384837 GCCTTTTAAAAGGTTACCACTAACTCGTGTAC
1 G-CTTTTGAAAGGTTGCCACCAACTCGTGT-G
* **
384869 ACTTTAAAAAGGTTGCCACCAACTCGTGTAG
1 GCTTTTGAAAGGTTGCCACCAACTCGTGT-G
* * * ** *
384900 G-TAGTTGAAAAAGTTTCCACCAACTCACGCAG
1 GCT-TTTG-AAAGGTTGCCACCAACTCGTG-TG
* *
384932 GCTTTTGAAAAGGTTGACAACAACTCGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* ** * *
384963 GC-TTTGAAAATGTTATCACCAACTCATATG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * *
384993 GACTTCTGAAAAGGTTACCGCCAACTCATGTGG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
385026 GCCTTTGAAAAGGTTGCTACCAACTCATATGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * * * *
385058 GATTTTAAAAATGTTGCCATCTACTCATGTG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGTG
* * * *
385089 AGATTTTGAAAAGGTTGGTC-CTAACTCGCGTGG
1 -GCTTTTG-AAAGGTT-GCCACCAACTCGTGT-G
* * * *
385122 GCTTTTGAAAAAGTTGCTACCAACTCTTGAAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTG-TG
* * * ** *
385154 ACTTTTAAAAAAGTTATCATCAACTCGTGTGG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGT-G
* * *
385186 GC-TTTGAAATGGTTACCACCAATTTGTGTGG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGT-G
** **
385217 GCTTTTGGGCTATTGAAAAGGTTGCCACCAACTTTTACAG
1 GC---T----T-TTG-AAAGGTTGCCACCAACTCGT-GTG
* * *
385257 ACTTTTGAAAGGTTGCTATCAACTCGTGTG
1 GCTTTTGAAAGGTTGCCACCAACTCGTGTG
* *
385287 GAC-TTTGAAATAGTTACCACCAACTCGTGTG
1 G-CTTTTGAAA-GGTTGCCACCAACTCGTGTG
** *
385318 AATTTTTGAAAAGGTTCCCACCAACTCGTGTG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* ** * *
385350 GATTTTTGAAAAGGTAACCACCAACTCCTATTG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGT-GTG
* ** * *
385383 GGTTTTGAAAAGGTTGCCAATAACTCATTTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
385415 GCTTTGGAAAAGTTGCCACCAACTTGTGTG
1 GCTTTTGAAAGGTTGCCACCAACTCGTGTG
** * *
385445 GCCATTTACAAAGCTTACCACCAACTCGTGTAG
1 G-C-TTTTGAAAGGTTGCCACCAACTCGTGT-G
* *
385478 GCTTTTGAAAAGGTTGCTACCAACTTGTGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* ** *
385510 GATTTTGAAAGGTTGTTACCAACTCATGTAG
1 GCTTTTGAAAGGTTGCCACCAACTCGTGT-G
* *
385541 GCTTTTGAAAAAGTTGCCAACAACTCGTGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
385573 GC-TTTGAAAATGTTGCTACCAACTCGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * *
385603 GACTTTTGAAAAGATTCCCACCGACTCATGTGG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
385636 GCCTTTGAAAAGGTTGCTACTAACTCGTATG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
385667 AGCTTTTGAAATGATTGCCACCAACTCTTCTAG
1 -GCTTTTGAAA-GGTTGCCACCAACTCGTGT-G
*
385700 ACTTTTGAAAAGGTTGCCACCAACTCGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
385731 GACTTTGGCAAAGGTTGCCACCAACTCATGTGG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
385764 GCTTTTGAAATAGTTACCACCAACTCGTGTGG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* * *
385796 GCCTTTGAAAGGTTGCTACCAACTCGTGTCA
1 GCTTTTGAAAGGTTGCCACCAACTCGTGT-G
* * *
385827 GATTTTGAAAAGGTTGCGACCAACTCGAGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
385859 GATTTTGGAATGGTTGCCACCAACTTGTGTGG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGT-G
* * * **
385891 GTTTTTGAAAAGGTTGCCAACAAGTTATGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * ** *
385922 AGCATTGGAAAGGTTGTCATTAACTCATGTG
1 -GCTTTTGAAAGGTTGCCACCAACTCGTGTG
* *** * * *
385953 GACTTTTGAAAAAGTTTTTAACAACTTGTGTA
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
*** * *
385985 AAGTTTGAAAAGGTTGTCACCAACTC-TATG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
386015 GTTTTTGAAAAGGTTGCTACCAACTCGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * *
386046 TGATTTTGAAAAGGTTACTACCAACTCATGTGG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * **
386079 GCTTTTGAAAAGGTTGCTAACAACTTATGTTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTG-TG
* *** * *
386111 AC-TTTGAAAAGGTTATTACTAACTCATGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
386142 GCTTTTTAAAAAAAGGTTGCCAACAACTTGTGTAG
1 GC-TTTT---GAAAGGTTGCCACCAACTCGTGT-G
* **
386177 AC-TTTGAAAAGGTTGTTACCAACTCGTGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
386208 GCTTTTGAAAAGGTGGACC-CTAACTCTTGTAG
1 GCTTTTG-AAAGGTTG-CCACCAACTCGTGT-G
* * *
386240 ACTTTTCAAAAGGTTGCCACCAACTCGTATG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGTG
* * * **
386271 GAC-ATTAAAATAGTTGCTTCCAACTCTTGTGGGCTTTTGG
1 G-CTTTTGAAA-GGTTGCCACCAACTC--GT--G----T-G
*
386311 GCTTTTGAAAAGGTTGCCACCAACTCTTGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
386343 ACTTTTGAAAGGTTGTCATCAACTCGTGTG
1 GCTTTTGAAAGGTTGCCACCAACTCGTGTG
*
386373 GAC-TTTGAAATGGTTGTCACCAACTCGTGTG
1 G-CTTTTGAAA-GGTTGCCACCAACTCGTGTG
* * * * *
386404 GCTTTTGAAAAGGTTACTAGCAGCAT-ATGTAG
1 GCTTTTG-AAAGGTTGCCACCAAC-TCGTGT-G
* * * * *
386436 GCTTTTAAAAAAGTTACTACCAACTTGTGTAG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGT-G
* * *
386468 AC-TTTGACTATGG-TGCCACAAACTCGTGTG
1 GCTTTTGA--AAGGTTGCCACCAACTCGTGTG
* * * * * *
386498 AAC-TTGGAAAAGGTTACCACTAACTCATGCG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
386529 AGCTTTTAAAAAGGTTACCACCAACTCGTGTG
1 -GCTTTT-GAAAGGTTGCCACCAACTCGTGTG
* * *
386561 AGATTTTAAAAAGGTTGCCAACAACTCGTGTAG
1 -GCTTTT-GAAAGGTTGCCACCAACTCGTGT-G
* * * *
386594 GC-ATTGAAAAGATTACCACCAACTTGTGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * * * **
386625 GCATCTGAAAATGTTGCAAACAACTTATGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
386656 GAC-TTTGAAATGGTTACCACCAACTTGTGTGG
1 G-CTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* * *
386688 GCCTTTGAAAGGTTGCTACCAACTCGTGTCA
1 GCTTTTGAAAGGTTGCCACCAACTCGTGT-G
* * * *
386719 GATTTTGAAAAGGTTGCGACCAACTTGAGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
386751 GATTTTGGAAAGGTTGTCACCAACTC-TGTG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGTG
* * * *
386781 GTTTTTGAAAAAGTTGCTACCAACTCATGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * * *
386812 TGATTTTGAAAAAGTTACTACCAACTCTTGTAG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
386845 ACTTTTGAAAGGTTGCCATCAACTCGTGTG
1 GCTTTTGAAAGGTTGCCACCAACTCGTGTG
386875 GAC-TTTGAAATGGTTGCCACCAACTCGTGTAG
1 G-CTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* * **
386907 GCTTTTGAAAAGGTTACTACCAACAAGTGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * * *
386939 GCTTTTGAAAAAGTTACTATCAACTCGTATAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
386971 AC-TTTGACTATGG-TGCCA-CAACCTCGTGTG
1 GCTTTTGA--AAGGTTGCCACCAA-CTCGTGTG
* ** * *
387001 AAC-TTTGAAAAGGTAACCACTAACTCCTGTGG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
387033 GCTTTTAAAAAGGTTACCACCAACTCGTGTG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGTG
* * * * * *
387064 GGTTTCTCCAAAAGTTACCGCTAACTCGTGTG
1 GCTTT-T-GAAAGGTTGCCACCAACTCGTGTG
* ** * * *
387096 AG---AT-AAAGGTTGCTGCTAACTCATCTTG
1 -GCTTTTGAAAGGTTGCCACCAACTCGT-GTG
* * **
387124 ACTTTTGAAAAGTTTGCCACCAACTATTGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
387156 ACTTTTGAAAAAGTTACCACCAACTCATGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
387188 GC-TTTGAAATGGTTGCTACCAATTTGTGTG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGTG
* ** **
387218 GACTTTTGGGCTATTAAAATGGTTGCCAGCAACTTTTACG
1 G-CTTTT--G------AAA-GGTTGCCACCAACTCGTGTG
* * * *
387258 GATTTTTGAAAGGTTGCTATCAACACGTGTG
1 G-CTTTTGAAAGGTTGCCACCAACTCGTGTG
* * * * *
387289 GAC-TTTAAAATAGTTTCCACCAACACATGTG
1 G-CTTTTGAAA-GGTTGCCACCAACTCGTGTG
** *
387320 AATTTTTGAAAAAGTTGCCACCAACTCGTGTAG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
** * * *
387353 ATTTTTGAAAAGGTTGCCACCATCTCCTGTCA
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
387385 GCTTTTGAAAAGGTTACCAACAACTCATTTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
387417 GC-TTTGAAAAAGTTGCCACCAACTTGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * ** *
387447 GCCATTTGCAAAGCTTAACACCAACTCGTGCAG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTG-TG
* * *
387480 GCTTTTAAAAAGGTTGCTACCAACTCATGTAG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGT-G
* * * *
387512 GATTTTGAAAGGATGTCACCAACTCATGTG
1 GCTTTTGAAAGGTTGCCACCAACTCGTGTG
* **
387542 GCTTTTGAAAAGGTTGCCAACAACTTTTGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
387574 GC-TTTGAAAAGGTTGCTACCAACTAGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
387604 GACTTTTGAAAAGGTTCCCACTAACTCATGTG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
387636 GACCTTTGAAAAGGTTGCTACCAACTCGCGTG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * ** *
387668 AGCTTTGGAAAAGGTTTCCAAAAACTTGTGTG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
387700 GAC-TTTGAAAAGGTTGCCACCAACTCGTGTG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * *
387731 TGATTTTGAAAAGTTTTCCACCAACTCATGTGG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
387764 GATTTTGAAAAGGTTACCACCAACTCATATGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
387796 GCCTTTGAAAAGGTTGCTACCAACTCATGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
387828 GATTTTGAAATAGTTGCCACCAACTCTTCTAG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* * * * *
387860 ACTTTTGAAAAGGTTGTCACCAACCCATATG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
387891 GAC-TTTGAAATGGTTGTCACTAATTCGTGTGGGCTTTTGG
1 G-CTTTTGAAA-GGTTGCCACCAACTC--GT--G----T-G
*
387931 GCTTTTGAAAAGGTTGCCACCAACTCTTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * **
387962 AACTTTTGAAAGGTTGGCATTAACTCGTGTG
1 -GCTTTTGAAAGGTTGCCACCAACTCGTGTG
* * * *
387993 GACTTTT-ATA-GTTACCACTAACTTGTGTG
1 G-CTTTTGAAAGGTTGCCACCAACTCGTGTG
* * * * *
388022 GAATTTTGAAAAGGTTGTCACCGACTCCTATG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
388054 AGCTCTTGAAAAGGTTGTCACCAACTCATGTG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
*
388086 GCCTTTTGCAAAGGTTGCCACCAACTCATGTGG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
*
388119 GCTTTTGAAATGGTTACCACCAACTCGTGTG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGTG
* ** *
388150 GGTCTTTGAAAGGTTGTTACCAACTCGTGTCA
1 GCT-TTTGAAAGGTTGCCACCAACTCGTGT-G
* * * * *
388182 GATTTTGAAAAGGTTACGACCAAATCGAGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
388214 GATTTTGGACAA-GTTGCCACCAACTTGTGTGG
1 GCTTTT-GA-AAGGTTGCCACCAACTCGTGT-G
* * * * *
388246 GATTTTAAAAAAGCTGCCACCAACTTGTGTG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGTG
* * *
388277 GAC-GTTGAAAAGGTTGTCACTAACTCGTGTG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * * *
388308 GACTTTTGAAAAAGCTT-CTAACAACTTGTGTA
1 G-CTTTTG--AAAGGTTGCCACCAACTCGTGTG
** * * *
388340 GAGTTTGAAAAGTTTGTCACCAACTC-TATG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
*
388370 G-TTTTGACAAAGGTTGCTACCAACTCGTGTG
1 GCTTTTG--AAAGGTTGCCACCAACTCGTGTG
* *
388401 TGATTTTGAAAAGGTTACCACCAACTCGTGTGG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
388434 GATTTTGAAAAGGTTGCTAACAACTTGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
388465 GAC-TTTGAAAAGGTTGTCACCAACTCGTCTAG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
388497 GCTTTTGAAAAGGTTGCCACCAATTCTTCTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
388529 ACCTTTGAAAAGGTTGCCACCAACTC-TGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
*
388559 GAC-TTTGAAATGGTTGCCACCAATTCGTAGGGGCTTTTGG
1 G-CTTTTGAAA-GGTTGCCACCAACTCGT----G----T-G
*
388599 GCTTTTGAAAAAGTTGCCACCAACTCGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
** * **
388630 GACTTTTGAACTGTTGGCATGAACTCGTGTAG
1 G-CTTTTGAAAGGTTGCCACCAACTCGTGT-G
* * *
388662 AC-TTTGAAATAGTTACCACCAACTCGTGTG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGTG
*
388692 GATTTTTGAAAAGGTTGCCACCAACTCGTGTG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * *
388724 GAC-TTTGACTAGGGTGCCACAAACTCGGGTG
1 G-CTTTTGA-AAGGTTGCCACCAACTCGTGTG
* *
388755 AAC-TTTGTAAAGGTTGCCACCAACTCCTGTGG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
388787 GCTCTTGGAAAGGTTGCCACCAACTCCTGTG
1 GCT-TTTGAAAGGTTGCCACCAACTCGTGTG
*
388818 GACTTTTGCAAAGGTTGCCACCAACTCATGTGG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
388851 GCTTTTGAAATGGTTACTACCAACTCGTGTGG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* * * *
388883 GCCTTTGAAAAGGTTGCTACCAACTCATGTTA
1 GCTTTTG-AAAGGTTGCCACCAACTCGTG-TG
* *
388915 GATTTTGAAAAGAG-CGCCACCAACTC-----
1 GCTTTTG-AAAG-GTTGCCACCAACTCGTGTG
* ** * * *
388941 G-ATTAAAAAGGTTGCCACCAATTTGTGTAA
1 GCTTTTGAAAGGTTGCCACCAACTCGTGT-G
* * * *
388971 GCTTTTGAAAAAGTTTCCAACAACTTGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
389002 GAC-TTTGAAGAGGTTGTCACCAACTC-TATGG
1 G-CTTTTGAA-AGGTTGCCACCAACTCGTGT-G
* * *
389033 GTTTTTGAAAAGGTTGCAACCAACTCATGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
389064 CGATTTTCAAAAGGTTACCACCAACTCGTGTGG
1 -GCTTTT-GAAAGGTTGCCACCAACTCGTGT-G
*
389097 GCTTTTGAAAAGGTTGCCAACAACGT-GTGTTG
1 GCTTTTG-AAAGGTTGCCACCAAC-TCGTG-TG
* * *** * *
389129 AC-TTTGAAAATGTTATTACTAACTCATGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
389160 GCTTTTGAAAAGCTTGCTACCAACTCGTGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
*
389192 GCTTTTGGGCTTTTAAAAAGGTTGTCACCAACTCGTGTG
1 GCTTTT--G-------AAAGGTTGCCACCAACTCGTGTG
* ** * *
389231 AACTTTAAAAAGGTTGCCATCAACTCATGTGG
1 -GCTTTTGAAAGGTTGCCACCAACTCGTGT-G
** * *
389263 GCTTTAAAAAAGGCTGCCACCAAATCGTGTGG
1 GCTTT-TGAAAGGTTGCCACCAACTCGTGT-G
* * *
389295 GCTTTTGAAAACGTTGCCATCAACTCATGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
**
389326 GAC-TTTGAAAAGGTTGCCACCAACTTATGTG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
* ** * * * ** *
389357 AACTTCTAAAAATGTTG-GACTTTGAA-AAG-GTT
1 -GCTT-TTGAAAGGTTGCCAC---CAACTCGTGTG
**** ***** ** * ****
389389 GC-CAACAAA--TTGTGTGGATTTTGAAAA
1 GCTTTTGAAAGGTTGCCACCAACTCGTGTG
** *
389416 G-TTTT-CTA---T-CAACTC-A-T-GTG-G
1 GCTTTTGAAAGGTTGCCAC-CAACTCGTGTG
* * * * *
389437 GATTTTGAAAAGTTTGCTACCAACTCATATG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
389468 AGATTTTGAAAAGGTTACCACCAACTCGTGTG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * *
389500 GCCTTTTGAAAAAGTTGCCAACAACTTGTATG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
389532 GAC-TTTGAAAAGGTTGCTAGCAACTCGTGTG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
** **
389563 GAC-TTTGAAAAGGTTGCCATGAACTTTTGTAG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * * *
389595 ACTTTTGAAAAAGTTACCGCCAATTCGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
389626 AAC-TTTGAAATGGTTACCACCAATTCATGTGAGCTTTTAG
1 -GCTTTTGAAA-GGTTGCCACCAACTC--GT--G----T-G
* * *
389666 GCTTTTGAAAAGTTTGCCACCAACTCTTGCG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * ** *
389697 GACTTTTGAAGGGTTGCTATTAACTTGTGTG
1 G-CTTTTGAAAGGTTGCCACCAACTCGTGTG
* * **
389728 GAC-TTTGAAATAGTTGCC-CTTAACAATTTTG-G
1 G-CTTTTGAAA-GGTTGCCAC-CAAC--TCGTGTG
* *
389760 GCTTTTTAAAAGGTTGCCACCAACTCATGTGG
1 GC-TTTTGAAAGGTTGCCACCAACTCGTGT-G
* * *
389792 GC-TTTGAAAAGGTTACCCCCAACTTGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
*** * *
389822 GAC-TTTGAAAAGGTTGCTTTCAACCCTTGTGG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
** * * * * **
389854 GCATTTAAAAAGGCTACCAACAACTAGTACAG
1 GC-TTTTGAAAGGTTGCCACCAACTCGT-GTG
** ** *
389886 GCTTTTGAAAAAATTGCCACCAACTTATGCG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * *
389917 GAC-TTTGAAATGGTTTCCACTAACTTGTATGG
1 G-CTTTTGAAA-GGTTGCCACCAACTCGTGT-G
*
389949 GC-TTTGAAAAGGTTGCCACCAACTCATGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
389979 GAC-TTTGAAAAGGTTGCCATCAACTCATGTG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * *
390010 TGCTTTTAAAAAGGTTGCTACCATCTCATGTG
1 -GCTTTT-GAAAGGTTGCCACCAACTCGTGTG
* * **
390042 GCTTTTGAAAATGTTACCAATAACTCGTGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
390074 GCTTTCGAAAATGTTGCCACAAACTCGTGTA
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
*** * * *
390105 AAATTTGAAAAAGGTTTCCACCAACTCATCTG
1 GCTTTTG--AAAGGTTGCCACCAACTCGTGTG
* *
390137 CGCTTTTAAAAAGGATGCCACCAACTCGTGTG
1 -GCTTTT-GAAAGGTTGCCACCAACTCGTGTG
* * *
390169 GATTTTTGAAAAAGTTACCACCAACTCGTGTGG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * **
390202 GCCTTTGAAAAGGTTGCTACCAATTTATGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * * *
390234 GATTTTAAAAAAGTTACCACCAACTCATGTG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGTG
* * * *
390265 AGATTTTGAAAGGGTTGTCAACAACTTGTGTG
1 -GCTTTTGAAA-GGTTGCCACCAACTCGTGTG
** * ** *
390297 GACTTTAAAAAGGTTGCCACCTACTAATATGG
1 G-CTTTTGAAAGGTTGCCACCAACTCGTGT-G
** * *
390329 GCTTTTGAAAAGGTTGCCATTAACTCTTCTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * **
390361 ACTTTTGAAAAGGTTGCCACCAACTCTTACG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
390392 AACTTTTGAAAGGTTGCCATCAACTCGTGTG
1 -GCTTTTGAAAGGTTGCCACCAACTCGTGTG
* * * **
390423 GAC-CTTGAAAAAGTTGCCCCCAACTCACGTG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
** * *
390454 AATTTTTTATAAGGTTGCCCCCAACTCGTGTG
1 -GCTTTTGA-AAGGTTGCCACCAACTCGTGTG
* * *
390486 GACTTTTGAAAAGGCTCCCACCAACTTC-TGTCA
1 G-CTTTTG-AAAGGTTGCCACCAAC-TCGTGT-G
* * *
390519 GCATTTGAAAAGGTTGTCGA-CAACTCGTTTG
1 GCTTTTG-AAAGGTTG-CCACCAACTCGTGTG
*
390550 AGC-TTTGAAAAGGTT-CTCACCAACTCATGTG
1 -GCTTTTG-AAAGGTTGC-CACCAACTCGTGTG
* * * * *
390581 GCCATTTGCAAAGCTTACGACCAACTCGTGTAA
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
** *
390614 GCTTTTGAAAAAATTGCTACCAACTCGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
*
390645 AGATTTTGAAAGGTTGCCACCAACTCGTGTGG
1 -GCTTTTGAAAGGTTGCCACCAACTCGTGT-G
* * * *
390677 GATTCTGAAAATGTTGCCACCAACTCATGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
390709 GCTATTGAAATAGTTGCCAACAACTTGTGTAG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* *
390741 AC-TTTGAAAAGGTTGTCACCAACTCGTGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
390772 GATTTTGAAAAGTTTCCTACCAATTCGTGTGG
1 GCTTTTGAAAGGTTGCC-ACCAACTCGTGT-G
* *
390804 GATTTTGAAAAGGTTACCACCAACTCGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
390835 GCCTTTTGAAAAGGTTGCCGA-CAACTTGTATAG
1 G-CTTTTG-AAAGGTTGCC-ACCAACTCGTGT-G
* * * * *
390868 AC-ATTAAAATGATTGCCACCAACTCATGTGG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* * ** **
390899 GCTATTGAAATGGTTTCCAATAACTTATGTG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGTG
* * *
390930 GAC-TTTGAAAAGGCTGTCACCAACTCATGTGG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
390962 GATTTTGAAAAGTTTCCTACCAACTCGTGTGG
1 GCTTTTGAAAGGTTGCC-ACCAACTCGTGT-G
* *
390994 GATTTTGAAAAGGTTACCACCAACTCGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
391025 GCCTTTTGAAAAGGTTGCCAACAACTTGTATG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
* ** *
391057 GACATTAAAAAGGTTGCCACCAACTCATGTG
1 G-CTTTTGAAAGGTTGCCACCAACTCGTGTG
* * *
391088 GAC-TTTAAAATAGTTGCCACCAACCAGTGCGGGCTTTTGG
1 G-CTTTTGAAA-GGTTGCCACCAA-C--T-C--G--TGT-G
* * *
391128 GCTTTTGAAAAGTTTGCCACTAACTCTTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
391159 GACTTTTGAAAGGTTGCTATCAACTCATGTG
1 G-CTTTTGAAAGGTTGCCACCAACTCGTGTG
* *
391190 GAC-TTTGAAATAGTTGCCACCAACCAGTGCGGGCTTTTGG
1 G-CTTTTGAAA-GGTTGCCACCAA-C--T-C--G--TGT-G
* * *
391230 GCTTTTGAAAAGTTTGCCACTAACTCTTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
391261 GACTTTTGAAAGGTTGCTATCAACTCGTGTG
1 G-CTTTTGAAAGGTTGCCACCAACTCGTGTG
391292 GAC-TTTGAAATGGTTGCCACCAACTCGTGTG
1 G-CTTTTGAAA-GGTTGCCACCAACTCGTGTG
** * * * *
391323 AGCCTTTAAAAAGGTTACCACCAGCTCATATG
1 -G-CTTTTGAAAGGTTGCCACCAACTCGTGTG
* **
391355 AGCTTTTGAAAAAGTTTTCACCAACTCGTGTG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
391387 GAC-ATTGAAAAGGTTGCCACCAACTAGTTTAG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
391419 GCTTTTTAAAATGG-TGCCAACAACTCGTGTG
1 GC-TTTTGAAA-GGTTGCCACCAACTCGTGTG
* * * *
391450 GATTATGAAAAGGTTGCCACAAACTCATGTTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTG-TG
* *
391482 GC-TTTGAAAAGCTTGCC-TCAACTCGTGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* **
391512 GC-TTTGAAAAGATTGCTTCCAACTCGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * * *
391542 AAC-TTTAAAAGGTTACAATCAACTCGTGTG
1 -GCTTTTGAAAGGTTGCCACCAACTCGTGTG
* * * *
391572 AGCTTTTAAAAAGGCTGCCAACAACTCATGTGG
1 -GCTTTT-GAAAGGTTGCCACCAACTCGTGT-G
* * * *
391605 GCATTTGAAAAGATTGGCACCAAC-CTATGTG
1 GCTTTTG-AAAGGTTGCCACCAACTC-GTGTG
** * * * *
391636 GAATTTGAAAAGATAGCCACAAACTTGTGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *** * *
391668 GC-TTGGAAAAGGCTATTACCATCTCATGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
391699 GC-TTTGAAAGGGTTGCCATCAACTTGTGTG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGTG
* * * *
391729 GAC-ATTGAAATGGTTGCCACCAACTAGTTTAA
1 G-CTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* * *
391761 ACTTTTTAAAAGGTTGCCACCAACTTGTGTAG
1 GC-TTTTGAAAGGTTGCCACCAACTCGTGT-G
* * *
391793 AC-TTTGAAAAGGCTGCCACAAACTCGTGTTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTG-TG
* *
391824 GC-TTTGAAAAG--GCTACTGCAACTCGTGTAG
1 GCTTTTGAAAGGTTGCCAC--CAACTCGTGT-G
* * *
391854 GC-TTTGAAAAGATTGCCTCCAACTCGTGTAA
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * * *
391885 AC-TTTGAAAAAGTTGTCATCAACTCATGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
** * *
391916 GCTTTCAAAAAGGCTGCCAACC-ACTCGTCTGG
1 GCTTT-TGAAAGGTTGCC-ACCAACTCGTGT-G
* * * *
391948 GCTTTTAAAAAGATTGCGACCAACTCATGTG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGTG
* * *
391979 GAC-ATTGAAATGGTTGCCACTAACTTGTGTGG
1 G-CTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* * *
392011 GC-TTGGAAAAGGTTGCCACCAACTCATATGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
*
392042 GC-TTTGAAAAGGTTGCCATCAACTCGTGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
*
392073 GCTTTTAAAAAGGTTGCCACCAACTCGTGTGG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGT-G
* *
392105 GCTTTTAAAAAGGTTGCCACCAACTCATGTG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGTG
* ** * * * *
392136 GATTTTTGAAAATATTACCACTAACTTGTATG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
* ** * *
392168 GACCTCTCAAAAGGTTACCACCAACTCATGTG
1 G--CTTTTGAAAGGTTGCCACCAACTCGTGTG
* *
392200 GAC-TTTGAAATGGTTGCCACTAACTTGTGTGG
1 G-CTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* **
392232 GC-TTTGAAAAGGTTTCCACCAACTTATGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
*** *
392262 GAC-TTTGAAAAGGTTATTATCAACTCGTGTAG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
392294 GCTTTTCAAAAGGCTGCCACCAACTCGTGTGG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGT-G
*
392326 GCTTTTGAAAAGGTTGCCAACAACTCGTGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
** * *
392358 GCTTTCAAAAATGTTTCCACCAA-TGCGTGTG
1 GCTTT-TGAAAGGTTGCCACCAACT-CGTGTG
** * * * * *
392389 GAC-TTTGACTGTGGTGGCACCAACTTGTATA
1 G-CTTTTGAAAG-GTTGCCACCAACTCGTGTG
* * *
392420 GATTTTGAAAAGGTTACCACCAGCTCGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
392451 AGCTTTTGAAAAGGTTACCACAAACTCGTGTG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
392483 AAC-TTTGAAATGGTTGCCACCAATTCGTTTG
1 -GCTTTTGAAA-GGTTGCCACCAACTCGTGTG
* * * *
392514 GAC-TTTAAAATGGTTGCCTCAAACTAGTGTG
1 G-CTTTTGAAA-GGTTGCCACCAACTCGTGTG
* * *
392545 GACTTTTGAAATGGTTGGCACCAACTCATGTAT
1 G-CTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* * *
392578 AC-TTTGAAAATGTTGTCACCAACTCGTGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
** * *
392609 GCTTTAAAAACGTTGCCACCAACTCGAGTG
1 GCTTTTGAAAGGTTGCCACCAACTCGTGTG
* ** *
392639 GAC-TCTGAAAAGGTTGTTATCAACTCGTGTGG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *** ** *
392671 GCTTTTAAAATCACTGCCATTAACTCATGTAG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* * **
392703 AC-TTTGAAAAGGTTGCCCCCAACGAGTGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * * * *
392734 ACTTTTAAAATGATTACCACAAACTTGTGTG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGTG
* ** * * *
392765 GAC-ATTGACAAGGTCACCATCAGCTCATGTGG
1 G-CTTTTGA-AAGGTTGCCACCAACTCGTGT-G
* *
392797 GCTTTTGAAAAGGTTACCACCAACTCGTGCGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTG-TG
* *
392829 GCTTTTGAAATTGTTGCTACCAACTCGTGTG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGTG
* * * *
392860 GAC-TTTGACTATGGTT-TCACCAACTTGTATAG
1 G-CTTTTGA--AAGGTTGCCACCAACTCGTGT-G
* * * *
392892 AC-TTTGAAAAGGTTACCACCAACTTGTATG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * *
392922 GCTTCTGAAAAGGTTGCCACCAATTCCTATTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGT-GTG
* * *
392954 AC-TTTGACTATGG-TGCCATCAACGT-GTGTAG
1 GCTTTTGA--AAGGTTGCCACCAAC-TCGTGT-G
* * * *
392985 AC-TTTGAAACAGTTGCCACCAAATCATGTGG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* * * *
393016 GCTTTTAAAAAGGTTGGCACCTACTCGTTTG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGTG
* * * * **
393047 GATTTTTGTAAATGTTACCCCCAACTTATGTG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * *
393079 GATCTTTGAAAAAGTTGCTACCAACTCATGTG
1 GCT-TTTG-AAAGGTTGCCACCAACTCGTGTG
* *
393111 GAATTTTAAAAAGGTTGCCACCAACTC-TGGTGG
1 G-CTTTT-GAAAGGTTGCCACCAACTCGT-GT-G
* * **
393144 GATTTTGAAAGGGTTGCTACCAACTTATGTG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGTG
*** * *
393175 GACTTACAAAAGGTTGTCACCAATTCGTGTGG
1 G-CTTTTGAAAGGTTGCCACCAACTCGTGT-G
* * * *
393207 GCTTTTGAAAAAGTTTCCAACAACTTGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
*
393238 GAC-TTTGAAAAGGTTGTCA-CAACTC-TGTGG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
393268 GTTTTTGAAAATGTTGCTACCAACTCATGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
*
393299 CGATTTTGAAAAGGTTGCCACCAACTCGTGTG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* ** * *
393331 GAC-TTTGACAATGG-TACCACCAACTTTTATA
1 G-CTTTTGA-AA-GGTTGCCACCAACTCGTGTG
** *
393362 TATTTTGAAAAGGTTGCCACCAACTCATGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * **** *
393393 AGCTTTTGAAAATGTTAGACTTTGACT-ATGGTG
1 -GCTTTTG-AAAGGTT-GCCACCAACTCGT-GTG
* * ** ** *
393426 CCACAAACTCATGTG-AACTTTGGTAGCC-AC-C----A
1 ------GCT--TTTGAAAGGTTGCCA-CCAACTCGTGTG
* * ** ** * *
393458 ACTTATG-TGGGCTT-TTA-AAAAT-GT-T-
1 GCTTTTGAAAGG-TTGCCACCAACTCGTGTG
***** *** * ** ** *
393483 -CCCACCAACTCTTGCGGATTTTTGAA-AAG-GTT
1 GCTTTTGAAAGGTTGC-CA----CCAACTCGTGTG
* *** * * * *** ** *
393515 ACCACTAAATATGTGGTCCTTTGAA-AAG-GTT
1 GCTTTTGAA-AGGTTG-CC-ACCAACTCGTGTG
* * *
393546 GC---T---A-----CCAAC-TCGT-GTGGG
1 GCTTTTGAAAGGTTGCCACCAAC-TCGTGTG
** ** * *
393564 ATTTTGAAAAGGTTACCACCAACTCGTCTG
1 GCTTTTGAAAGGTTGCCACCAACTCGTGTG
* * * *
393594 AGATTTTGAAAAGGTTGCTAGCAACTCTTGTGG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
393627 GCTTTTGAAAAGGTTGCCAACAACTTGTATG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
393658 GAC-TTTGAAAAGGTTGTCACCAACTCCTGTAG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
393690 GCTTTTAAAATGGTTGCCACCAACTCTTGTAG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* *
393722 ACTTTTGAAAATGTTGCCACCAACTCGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
393753 GAC-TTTGAAATGGTTGCCACAAATTCATGTAAGCTATTGG
1 G-CTTTTGAAA-GGTTGCCACCAACTC--GT--G----T-G
* * * *
393793 GCTTTTTAAAAGCTTGCCACCAATTCTTGTG
1 GC-TTTTGAAAGGTTGCCACCAACTCGTGTG
* *
393824 GACTTTTGAAAGGTTGCAATCAACTCGTGTG
1 G-CTTTTGAAAGGTTGCCACCAACTCGTGTG
* * **
393855 AAC-TTTGAAATTGTTGCCATTAACTCGTGTAG
1 -GCTTTTGAAA-GGTTGCCACCAACTCGTGT-G
** *
393887 ATTTTTGAAAAGGTTGCCACCAACTCGTATG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * * *
393918 GCCATTTGCAAAGCTTAG-CGCTAACTTC-TATAG
1 G-CTTTTG-AAAGGTT-GCCACCAAC-TCGTGT-G
*
393951 GCTTTTGAAAAGGTTGCTACCAACTCGTGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
393983 GATTTTGAAAGGTTACCACCAACTCATGCAG
1 GCTTTTGAAAGGTTGCCACCAACTCGTG-TG
* * * *
394014 GATTTTGAAAAGGTTGCTACCAACTTGTGTTA
1 GCTTTTG-AAAGGTTGCCACCAACTCGTG-TG
* * *
394046 GCTTTTGAAAAGGTTGCCAACAATTTGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* ** *
394077 GAC-TTTGAAAAAGTTATCACCAACTCGTATGG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
394109 GCTTTTGAAAAGGTTGCGACCAACTC-TCATAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGT-GT-G
* * *
394141 ACTTTTGAAAATGTT-CCTACCAACTCTTGTGG
1 GCTTTTG-AAAGGTTGCC-ACCAACTCGTGT-G
* * * * * *
394173 GATTTTAAAAAGTTTGCTACCAACTCATGTAA
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGT-G
* * * *
394205 GATTTTGAAAAAGTTACCACCAACTCGTATG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
394236 GCATTTTGAAAAGGTTGCCAACAACTTGTATG
1 GC-TTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
394268 GAC-TTTGAAAAGGTTGTCATCAACTCGTGTG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
* **
394299 GAC-TTTGAAAAGGTTGCCACGAA-TATTTGTAG
1 G-CTTTTG-AAAGGTTGCCACCAACT-CGTGT-G
* **
394331 ACTTTTGAAAAGGTTAACACCAACTCGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
394362 GAC-TTTGAAATGGTTGCCACCAACTCGTGTGGGCTTTTGG
1 G-CTTTTGAAA-GGTTGCCACCAACTC--GT--G----T-G
* * * *
394402 GCTTTTGAAAAGTTTGCTACCAACTCTTATG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * *
394433 GACTTCTAAAAGGTTGCTATCAACTCGTGTG
1 G-CTTTTGAAAGGTTGCCACCAACTCGTGTG
* *
394464 GATTTTGAAATGGTTTCCACCAACTCGTGTAAG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGT--G
* ** * * *
394497 CCTTTAAAAAGTTTACCACCAAATCGTGTG
1 GCTTTTGAAAGGTTGCCACCAACTCGTGTG
394527 AGCTTTTGAAAAGGTTGCCACCAACTCGTGTG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
394559 GAC-ATTGAAAAGGTTGCCACCAACTAGTTTGG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* ** *
394591 GCTTCTTAAAATCTTACCACCAACTCGTGTG
1 GCTT-TTGAAAGGTTGCCACCAACTCGTGTG
* *
394622 GAC-TTTGAAAAGGTTACCACTAACTCGTGTGG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
*
394654 GC-TTTGAAAAGGTTGCC-CCAACTCATGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
394683 GAC-TTTGAAAAGGTTGCCATCAACCCGTGTGG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * * * *
394715 GCTTTTAAAAAAGCTGCCAACAACTAGTGCAG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTG-TG
* *
394747 GCTTTTGAAAAGATTGCCACCAACTCATGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
394778 GAC-TTTGAAATGGTTGCCACTAACTTGTGT-
1 G-CTTTTGAAA-GGTTGCCACCAACTCGTGTG
* *
394808 GTTCTTTGAAAAGGTTGCCACCAACTCATGTG
1 GCT-TTTG-AAAGGTTGCCACCAACTCGTGTG
* * * *
394840 GAC-ATTGAAAAGGTTACCATCAACTGGTGTGG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * ** *
394872 GCTTTTAAAAATGTTATCATCAACTCGTGTAG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGT-G
* *
394904 GCTTTTAAAAAGGCTGCCACCAACTCGTGTAG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGT-G
* *
394936 GCTTTTGAAAAGGTTGCCAACAACTCATGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
** ** * * *
394968 GCTTTCAAAAATATTACCACCAACTTGAGTG
1 GCTTT-TGAAAGGTTGCCACCAACTCGTGTG
* ** *
394999 GAC--TTCAACTGTAGTGCCACCAAGCT-GTATAG
1 G-CTTTTGAAAGGT--TGCCACCAA-CTCGTGT-G
* * * * *
395031 ACTTTGGAAAGGTTGCTACGAAGAT-GTGTG
1 GCTTTTGAAAGGTTGCCACCAA-CTCGTGTG
** * * **** *
395061 AGCTTCTAAAAATGTTAGACTTTGACT-ATGGTG
1 -GCTT-TTGAAAGGTT-GCCACCAACTCGT-GTG
* * *
395094 CCACAAACTCATGTGAAATTTGAAAAGGTTGCCACCAACTCATGTG
1 ------GCT--TTTGAAA--------GGTTGCCACCAACTCGTGTG
* * * * *
395140 AGCTTTTAAAAAGGTTGACTCTAACTCATGTG
1 -GCTTTT-GAAAGGTTGCCACCAACTCGTGTG
* * *
395172 GATTTTTGAAAAGGTTACCACTAACT-GTGTGG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
395204 GCCTTTGAAAAGGTTGCAACCAACTCGTGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
395236 GATTTTGAAAAAGTTACCACCAACTCATGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * *
395268 GATTTTGAAAAGGTTGCCAACAACTCGTGCGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTG-TG
* * * *
395300 GCATTTGAAAAGGTTACCAACAACTTGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
395331 GAC-TTTGAAAAGGTTGTCACCAACTCATGTG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * *
395362 AGCTTTTGAAAAGGTTACCACCAACTCTTCTAA
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
395395 ACTTTTGAAAAGGTTGCCACCAACTCATGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
395427 AC-TTTGAAATGGTTGCCACCAATTCGTGTGGGCTTTTGG
1 GCTTTTGAAA-GGTTGCCACCAACTC--GT--G----T-G
* ** * *
395466 GCTTTTGAAAAGGCTGCCATAAACTCTTATG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
*
395497 GACTTTTGAAAGGTTGCCATCAACTCGTGTG
1 G-CTTTTGAAAGGTTGCCACCAACTCGTGTG
* *
395528 GAC-TTTGAAAAAGTTACCACCAACTCGTGTG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
** * *
395559 AATTTTTGAAAAGGTTGCTACCAACTCATGTAG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
** * * * *
395592 ATTTTTGAAAAGGTTCCCACCAACTCCTATCA
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
*
395624 GCTTTT-ACAAGGTTGCCGA-CAACTCGTTTGG
1 GCTTTTGA-AAGGTTGCC-ACCAACTCGTGT-G
* * *
395655 GCTTTGGAAAAGGTTGCCACCAATTCCTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * * * *
395686 ACCATTTGCAAAGCTTACCACCAACTTGTGTAG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * * *
395719 GCTTTTGAAAAGATTGCTACTACCTCATGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
395751 GATTTTGAAAGGTTGCCTCCAACTCATATGG
1 GCTTTTGAAAGGTTGCCACCAACTCGTGT-G
* * * *
395782 GATTTTGAAAATGTTGCCACCGACTCGTATAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * ** * * *
395814 ACTTTTAAAAAGGTTGCCAATAACTTGTATA
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGTG
* * *
395845 GATTTTAAAAAGGTTGTCACCAACTCGTGTAG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGT-G
* * **
395877 AC-TTTGAAAAGGTTGCCACTAACTTTTGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
395908 ACTTTTGAAAGGTTGCCACCAACTTGTGTG
1 GCTTTTGAAAGGTTGCCACCAACTCGTGTG
* * *
395938 GCCTTTTGAAAAGGTTGCCAACAACTTGTATGG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
** * *
395971 GCTTTAAAAAGGTTGTCACCAACTCATGTG
1 GCTTTTGAAAGGTTGCCACCAACTCGTGTG
* ** *
396001 GAC-TTTGAAAAGGTTGCCACTAACTTTTGCAG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTG-TG
* *
396033 ACTTTTGAAAAGGTTACCACCAACTCGTGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
*
396064 GAC-TTTGAAATGGTTGCCACCAACTCATGTAG
1 G-CTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* * *
396096 GCTTTTGGGCTTTTAAATAGTTACACACCAACTCTTGTG
1 GCTTTT--G-----AAA-GGTTGC-CACCAACTCGTGTG
* * **
396135 GACTTTTGAAAGGCTGCTATTAACTCGTGTG
1 G-CTTTTGAAAGGTTGCCACCAACTCGTGTG
* * *
396166 GAC-TTTAAAATGGTTGCTACCAACTCATGTAAG
1 G-CTTTTGAAA-GGTTGCCACCAACTCGTGT--G
* * * *
396199 CCTTTAT-AAAGGTTACCACCAACTCATATG
1 GCTTT-TGAAAGGTTGCCACCAACTCGTGTG
*
396229 AGCTTTTGAAAAGTTTGCCACCAACTCGTGTG
1 -GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* * *
396261 GAC-ATTGAAAAGGTTGCCACCAACTAGTTTAG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
396293 GCTTTTTAAAAGGTTAG-CACCAACTCGTATG
1 GC-TTTTGAAAGGTT-GCCACCAACTCGTGTG
** * * *
396324 GACTTTAAAAAGGTTGTCACAAACTTGTGTTG
1 G-CTTTTGAAAGGTTGCCACCAACTCGTG-TG
* *
396356 G-ATTTGAAAAGGTTACC-CCAACTCGTGTAG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* *
396386 AC-TTTGAAAAGGTTGCCATCAACTCGTGTGG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGT-G
* * * *
396417 GCTTTTAAAAAGGCTGCCAACAACTTGTGTG
1 GCTTTT-GAAAGGTTGCCACCAACTCGTGTG
* **
396448 GTCTTTTGAAAAGATTGCCACCAACTCACGTG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
* *
396480 GAC-TTTGAAATGGTTGCCACTAACTTGTGTGG
1 G-CTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* * *
396512 GC-TTGGAAAAGGTTGCCCCCAACTCATGTG
1 GCTTTTG-AAAGGTTGCCACCAACTCGTGTG
* **
396542 GAC-TTTGAAAAAGTTGCCATTAACTCGTGTG
1 G-CTTTTG-AAAGGTTGCCACCAACTCGTGTG
*
396573 GAC-TTTGAAATGGTTGCCACTAACTCGTGTAG
1 G-CTTTTGAAA-GGTTGCCACCAACTCGTGT-G
* * * *
396605 GCTTTTGGGCCTTTGAAAAGTTTACCACCAACTCTTATG
1 GC---T-----TTTG-AAAGGTTGCCACCAACTCGTGTG
* *
396644 GACTTTTGAAAGGTTGCTATCAACTCGTGTTG
1 G-CTTTTGAAAGGTTGCCACCAACTCGTG-TG
*
396676 AC-TTTGAAATGGTTGCCACCAACTCGTGTG
1 GCTTTTGAAA-GGTTGCCACCAACTCGTGTG
** * ** *
396706 AGCCTTTAAAAAGGTTACCATAAACTCGTGTT
1 -G-CTTTTGAAAGGTTGCCACCAACTCGTGTG
* * *
396738 GATATTGAAAAGGTTGCGACCAACT
1 GCTTTTG-AAAGGTTGCCACCAACT
396763 AGTTTAGGCT
Statistics
Matches: 30284, Mismatches: 8291, Indels: 6125
0.68 0.19 0.14
Matches are distributed among these distances:
17 1 0.00
18 3 0.00
20 4 0.00
21 4 0.00
22 12 0.00
23 40 0.00
24 82 0.00
25 65 0.00
26 29 0.00
27 88 0.00
28 112 0.00
29 158 0.01
30 1484 0.05
31 10253 0.34
32 15608 0.52
33 979 0.03
34 83 0.00
35 59 0.00
36 50 0.00
37 15 0.00
38 83 0.00
39 139 0.00
40 756 0.02
41 113 0.00
42 2 0.00
43 3 0.00
44 2 0.00
46 32 0.00
47 23 0.00
48 2 0.00
ACGTcount: A:0.28, C:0.19, G:0.22, T:0.31
Consensus pattern (30 bp):
GCTTTTGAAAGGTTGCCACCAACTCGTGTG
Found at i:356188 original size:220 final size:219
Alignment explanation
Indices: 355665--356216 Score: 559
Period size: 220 Copynumber: 2.5 Consensus size: 219
355655 TGAGCATTTG
* * * * * ** * *
355665 AAAAGGTTAGCACCAACTCGTGTGAACTTTGAAATGGTTGCCTCCAACTAGTGTAGACTTTTGAA
1 AAAAAGTTACCACCAACTAGTGAGGACTTTGAAAAAGTTGCCCCCAACTAGTGTGGACTTTTGAA
* * * * * *
355730 ATGGTTGCCACCAACTCGTGTATACTTTAAAAATGTTGCTACCAACTCGTGTTGGCTATAAAAAG
66 ATGG-TGCCACCAACTTGTGTAGACATTAAAAAGGTTGCCACCAACTCGTGTGGGCTATAAAAAG
* * * * *
355795 GTTGCCACCAACTCGTGCGGATTTTGAAAAGGTTGCCATCAACTCGTGTAGGCTTTTAAAAAGGC
130 GTTACCACCAACTCGTGCAGACTTTGAAAAGGTTGCCATCAACTCATGTAGGCATTTAAAAAGGC
*
355860 TGCCATCAACTCATGTAGGCTTTTA
195 TGCCACCAACTCATGTAGGCTTTTA
* * * * *
355885 AAAAAGTTGCCATCAACTAGTGTGGACTTTGAAAAAGTTGCCCCCAACGAGTATGGACTTTTGAA
1 AAAAAGTTACCACCAACTAGTGAGGACTTTGAAAAAGTTGCCCCCAACTAGTGTGGACTTTTGAA
* * * ** * * * * *
355950 AAGATTACCATAAACTTGTGTGGACATTGACAAGGTTGCCACTAACTCGTGTGGGCTTTGAAAAA
66 ATG-GTGCCACCAACTTGTGTAGACATTAAAAAGGTTGCCACCAACTCGTGTGGGCTAT-AAAAA
* * *
356015 -GTTACCACCAACTCGTGTAGACTTTGAAAAGGTTGCCATCAAGTCATGTGGGCATTTAAAAAGG
129 GGTTACCACCAACTCGTGCAGACTTTGAAAAGGTTGCCATCAACTCATGTAGGCATTTAAAAAGG
* *
356079 CTGCCACCAACTCGTGTGGGCTTTTA
194 CTGCCACCAACTCATGTAGGCTTTTA
** * * * * * *
356105 AAAAAGTTACCACCATTTCGTGAGGGCTTTTAAAAATTTTGCCCTCAACTTGTGTGGAC-TTTGA
1 AAAAAGTTACCACCAACTAGTGAGGACTTTGAAAAA-GTTGCCCCCAACTAGTGTGGACTTTTGA
* * * * *
356169 ATATGGTGCCACCAACTTGTATATACTTTGAAAAGGTTACCACCAACT
65 A-ATGGTGCCACCAACTTGTGTAGACATTAAAAAGGTTGCCACCAACT
356217 TATGAAGGCT
Statistics
Matches: 264, Mismatches: 64, Indels: 8
0.79 0.19 0.02
Matches are distributed among these distances:
220 240 0.91
221 24 0.09
ACGTcount: A:0.30, C:0.20, G:0.21, T:0.29
Consensus pattern (219 bp):
AAAAAGTTACCACCAACTAGTGAGGACTTTGAAAAAGTTGCCCCCAACTAGTGTGGACTTTTGAA
ATGGTGCCACCAACTTGTGTAGACATTAAAAAGGTTGCCACCAACTCGTGTGGGCTATAAAAAGG
TTACCACCAACTCGTGCAGACTTTGAAAAGGTTGCCATCAACTCATGTAGGCATTTAAAAAGGCT
GCCACCAACTCATGTAGGCTTTTA
Found at i:356545 original size:126 final size:125
Alignment explanation
Indices: 354583--359905 Score: 774
Period size: 127 Copynumber: 41.9 Consensus size: 125
354573 CATGTGGACT
* * * ** * * *
354583 TTGAAATGGTTACCACCAATTCATGTGGATTTTTGAAAAGGTTGCCACCAACTCGTGTGGATTTT
1 TTGAAAAGGTTGCCACCAACTCATGT-GAACTTTAAAAAAGTTGCCACCAACTCGTGTAGA-TTT
** * * * ** * * * *
354648 TGAAAAGGTTGCCACCAACTCCTATGGGCTTTTAAAAAGGTTGCCAACAACTCATTTGGGCT-
64 TGAAAAGGTTGCCACCAACTTGTGTAGAC-TTCGAAAAGGTTACCACCAACTCATATAGGCTA
* * * ** * **
354710 TTCAAAAGGTTGCCACCAACTCGTGTGGACATTT-GTAAAGCTTACCACCAACTCGTGGGGGATT
1 TTGAAAAGGTTGCCACCAACTCATGTGAAC-TTTAAAAAAG-TTGCCACCAACTCGT-GTAGATT
* * * * * * * * * * * * * *
354774 TTG-AAAGGTTGCCAGCAACTCGTATGGGATTTTGAAAATGTTGCTAGCAACTCGTGTGGGCTT
63 TTGAAAAGGTTGCCACCAACTTGTGT-AGACTTCGAAAAGGTTACCACCAACTCATATAGGCTA
* * * * * ** *
354837 TTGAAAAGGTTGCCAACAGCTTGA-GTGGACTTTGAAATGGTTGTCACCAACTCGTGTGAGATTT
1 TTGAAAAGGTTGCCACCAAC-TCATGTGAACTTTAAAAAAGTTGCCACCAACTCGTGT-AGATTT
* *** * * * ** * * *
354901 TGAAAAGTTTGCCACCAACGCATGTAGGATTTCGAAAATGTTACCACCAATTTGTGTGGGCTT
64 TGAAAAGGTTGCCACCAACTTGTGTA-GACTTCGAAAAGGTTACCACCAACTCATATAGGCTA
* * ** * ** * * ** *
354964 TTGAAAAAGTTGCCAACAACTTGTGTGGACTTCGAAAAGGTTGCTAATAACTCTTGTAGACTTTT
1 TTGAAAAGGTTGCCACCAACTCATGTGAACTTTAAAAAAGTTGCCACCAACTCGTGTAGA-TTTT
* * * * * * *
355029 GAAAAAGTTTCCACCAACTCGTGTAGACTT-TAAAATGGTTGCCACCAACTCGTGTGGGCATTTG
65 GAAAAGGTTGCCACCAACTTGTGTAGACTTCGAAAA-GGTTACCACCAACTC--AT----A-TAG
*
355093 AGCTT
122 -GCTA
* * * * ** * * * *
355098 TTGAAAAGGTTACCACCAACTC-TTTTAGGCTTTTGAAAGGTTGCCATCAACTCGTGTGGACTTT
1 TTGAAAAGGTTGCCACCAACTCATGTGA-ACTTTAAAAAAGTTGCCACCAACTCGTGTAGATTTT
* * * * * * * *
355162 GAAATGGTTGCCACCAACTAGTGTGGACATT-GAAAGGGTTGCCACCAA-TTAGT-TTGTGCTT
65 GAAAAGGTTGCCACCAACTTGTGTAGAC-TTCGAAAAGGTTACCACCAACTCA-TATAG-GCTA
* * * * * * * * * **
355223 TTAAAAAGGTTGCCAGCAGCTCGTGTGGACTTT-GAAAAGTTTGCCACTAACTCATAG-GGGCTT
1 TTGAAAAGGTTGCCACCAACTCATGTGAACTTTAAAAAAG-TTGCCACCAACTCGT-GTAGATTT
* * *** * * * * * * * * *
355286 TGAAAAAGTTACCTTTAACTTGTGTGGAATTTGAAAAGGTTGCTATCAACTTATGT-GGCCTT
64 TGAAAAGGTTGCCACCAACTTGTGTAGACTTCGAAAAGGTTACCACCAACTCATATAGG-CTA
* ** * * ** ** * * *
355348 TTAAAAAGGCAGCCAACAACTCGTGTGGGCTTT-TGAAAGATTGCCACCAACTCATGTGGACTTT
1 TTGAAAAGGTTGCCACCAACTCATGTGAACTTTAAAAAAG-TTGCCACCAACTCGTGTAGATTTT
* * * * * * *
355412 GAAAAGGTTGCCACTAACTCGTATGGGCTTTGAAAAGGTTACCACCAACTCCTAT-GGACT-
65 GAAAAGGTTGCCACCAACTTGTGTAGACTTCGAAAAGGTTACCACCAACTCATATAGG-CTA
* * * *** ** *** * * *
355472 TTGAAAAGGTTGCTATCAACTCGTGTAGGTTTTTAAAAGGGCAACCACCAACTCGTATGGGCTTT
1 TTGAAAAGGTTGCCACCAACTCATGT-GAACTTTAAAAAAGTTGCCACCAACTCGTGT-AGATTT
* ** * *** ** * *
355537 TGAAAAGGTTTCCACCAACTCATGTAGGCTTTCGAAAATAATACCACCAAGGCGTGT-GGACT-
64 TGAAAAGGTTGCCACCAACTTGTGTAGAC-TTCGAAAAGGTTACCACCAACTCATATAGG-CTA
* * * ** *
355599 TTGACTATAGG--GCCACCAACT--TGTATAGACTTTGAAAATA-TTGCCACCTGCTCGTATGAG
1 TTGA--AAAGGTTGCCACCAACTCATGT-GA-ACTTT-AAAAAAGTTGCCACCAACTCGTGT-AG
* * * * * *
355659 CA-TTTGAAAAGGTTAG-CACCAACTCGTGT-GAACTTTGAAATGGTTGCCTCCAACT-AGTGTA
60 -ATTTTGAAAAGGTT-GCCACCAACTTGTGTAG-ACTTCGAAAAGGTTACCACCAACTCA-TATA
* *
355720 GACTT
121 GGCTA
* * * * * ** *
355725 TTGAAATGGTTGCCACCAACTCGTGT-ATACTTTAAAAATGTTGCTACCAACTCGTGTTGGCTAT
1 TTGAAAAGGTTGCCACCAACTCATGTGA-ACTTTAAAAAAGTTGCCACCAACTCGTGTAGATTTT
* * ** * * * * * * *
355789 AAAAAGGTTGCCACCAACTCGTGCGGATTTTGAAAAGGTTGCCATCAACTCGTGTAGGCTT
65 GAAAAGGTTGCCACCAACTTGTGTAGACTTCGAAAAGGTTACCACCAACTCATATAGGCTA
* * * * * * * *
355850 TTAAAAAGGCTGCCATCAACTCATGT-AGGCTTTTAAAAAAGTTGCCATCAACTAGTGTGGACTT
1 TTGAAAAGGTTGCCACCAACTCATGTGA-AC-TTTAAAAAAGTTGCCACCAACTCGTGTAGATTT
* * ** * * * * ** ** *
355914 TGAAAAAGTTGCCCCCAACGAGTATGGACTTTTGAAAAGATTACCATAAACTTGTGT-GGAC-A
64 TGAAAAGGTTGCCACCAACTTGTGTAGAC-TTCGAAAAGGTTACCACCAACTCATATAGG-CTA
* * * ** * * *
355976 TTGACAAGGTTGCCACTAACTCGTGTGGGCTTTGAAAAAGTTACCACCAACTCGTGTAGACTTTG
1 TTGAAAAGGTTGCCACCAACTCATGTGAACTTTAAAAAAGTTGCCACCAACTCGTGTAGATTTTG
* * ** * * ** * * * * * *
356041 AAAAGGTTGCCATCAAGTCATGTGGGCATTTAAAAAGGCTGCCACCAACTCGTGTGGGCTT
66 AAAAGGTTGCCACCAACTTGTGTAGAC-TTCGAAAAGGTTACCACCAACTCATATAGGCTA
* * * ** * * ** ** * * *
356102 TTAAAAAAGTTACCACCATTTCGTGAGGGCTTTTAAAAATTTTGCC-CTCAACTTGTGTGGACTT
1 TTGAAAAGGTTGCCACCAACTCATGTGAAC-TTTAAAAAAGTTGCCAC-CAACTCGTGTAGATTT
* * * * *
356166 TGAATATGG-TGCCACCAACTTGTATATACTTTGAAAAGGTTACCACCAACTTATGA-AGGCT-
64 TGAA-AAGGTTGCCACCAACTTGTGTAGACTTCGAAAAGGTTACCACCAACTCAT-ATAGGCTA
* * * * ** * * * * *
356227 TCTGGAAAA-GTTGCCACCTACTCGTATGGACTTTGACTATAG-GGCAATCAACTCGTGTAGACT
1 T-T-GAAAAGGTTGCCACCAACTCATGTGAACTTT-AAAAAAGTTGCCACCAACTCGTGTAGATT
* * *
356290 TTGAAAAGGTTGCCACCAACTTGTGTAGACTTCGAAAAGTTTACCACCAACTCTTATAGGTTA
63 TTGAAAAGGTTGCCACCAACTTGTGTAGACTTCGAAAAGGTTACCACCAACTCATATAGGCTA
* * * * *
356353 TTGAAAAGGTTGCCACCAACTCATGTGGACTTTAAAAAAGTTTCCACCAATTCGGGTAAGCTTTT
1 TTGAAAAGGTTGCCACCAACTCATGTGAACTTTAAAAAAGTTGCCACCAACTCGTGT-AGATTTT
* * *
356418 GAAAAGGTTACCACCAACTTGTGTAGCCTTCTGAAAAGGTTACCACCAACTCATGT-GGACTA
65 GAAAAGGTTGCCACCAACTTGTGTAGACTTC-GAAAAGGTTACCACCAACTCATATAGG-CTA
** * ** * * *
356480 -TGACTATGTTGCC-CCAAACTTGTGTGAACTTTGAAAAGGTTGCCACCAACTCGTGTGAGTTTT
1 TTGAAAAGGTTGCCACC-AACTCATGTGAACTTTAAAAAAGTTGCCACCAACTCGTGT-AGATTT
* * ** * * * * * *
356543 TGAAAAGGTTGCCACCAACTCGTGTGGACTTTTTAAACGGTTGCCAACAAATC-TCGTGGGCT-
64 TGAAAAGGTTGCCACCAACTTGTGTAGAC-TTCGAAAAGGTTACCACCAACTCAT-ATAGGCTA
* ** * * * * **
356605 TTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTAAAAAGGTTACCACAAACTCATGTAAGCCTT
1 TTGAAAAGGTTGCCACCAACTCATGTGAAC-TTTAAAAAAGTTGCCACCAACTCGTGT-AGATTT
* * ** * * ** * ** ** *
356670 TGAAATGGTTGCTACCAACACGTGTGGAATTTTAAAAAGGTTACCACCAACTCGT-GCGAAATT
64 TGAAAAGGTTGCCACCAACTTGTGTAG-ACTTCGAAAAGGTTACCACCAACTCATATAG-GCTA
* * * ** ** * * * *
356733 TTGAAAAAGTTGTCACTAACTTGTGTGGGCTTTTGAAAAGGTTACCACCAACTCTTGTAGACTTT
1 TTGAAAAGGTTGCCACCAACTCATGTGAAC-TTTAAAAAAGTTGCCACCAACTCGTGTAGA-TTT
* * * * * ** * * * *
356798 TCAAAAGGTTGCCACCAACTCGTGTGGA-TATTGAAATA-GTTGCTTCCAACTCGTTTGGGCTT
64 TGAAAAGGTTGCCACCAACTTGTGTAGACT-TCGAAA-AGGTTACCACCAACTCATATAGGCTA
* ** * * *** *
356860 TTGAAAAGGTTGCCACCAACTCCTGT-AGACTTTTGAAAGGTTTCTGTCAACTCGTGTAGACTTT
1 TTGAAAAGGTTGCCACCAACTCATGTGA-ACTTTAAAAAAGTTGCCACCAACTCGTGTAGATTTT
* * * * * * * *
356924 GAAATGGTTGCCAGCAACTCGTGTGGGCTTTTGAAAAGGTTACCACCAACAT-ATGTAGGCTT
65 GAAAAGGTTGCCACCAACTTGTGTAGAC-TTCGAAAAGGTTACCACCAAC-TCATATAGGCTA
* * * * * *
356986 TTGAAAAGGTTACTACCAACTCATGT-AGACTTTAACTATAG-TGCCACAAACTCGTGT-GAACT
1 TTGAAAAGGTTGCCACCAACTCATGTGA-ACTTTAA-AAAAGTTGCCACCAACTCGTGTAG-ATT
* * * * * ** * * * * *
357048 TTGAAAAGGTTACCACCAACTCGCGTGGGCTTTTAAAATGGTTACCACCAACTCGTGTGGGATT
63 TTGAAAAGGTTGCCACCAACTTGTGTAGACTTCGAAAA-GGTTACCACCAACTCATATAGGCTA
* * * * * *
357112 TTGTAAAA-GTTACCATCAACTCGTGTGAGCTTTTAAAAATGTTGCCAACAACTCGTGTAGGA-T
1 TTG-AAAAGGTTGCCACCAACTCATGTGAAC-TTTAAAAAAGTTGCCACCAACTCGTGTA-GATT
* * * * * ** *
357175 TTGAAAAGGTTGCCACCAACTCGTGT-GAACTTTTGAAAATGTTGCCAACAACTTGTGT-GGACT
63 TTGAAAAGGTTGCCACCAACTTGTGTAG-AC-TTCGAAAAGGTTACCACCAACTCATATAGG-CT
357238 -
125 A
** * * * * * * * *
357238 TTGAAAAGGTTGTTACCAACTTATGTGAGCTTTGGAAAATGTTGCTACCAACTCATATGGGATTT
1 TTGAAAAGGTTGCCACCAACTCATGTGAACTTT-AAAAAAGTTGCCACCAACTCGTGT-AGATTT
* * * * * * *
357303 TGAAAAGGTTGTCACCAACTTGTGT-GAGCTTTTGAAAAGGTTGCCAACAATTTATGT-GGACT-
64 TGAAAAGGTTGCCACCAACTTGTGTAGA-C-TTCGAAAAGGTTACCACCAACTCATATAGG-CTA
* * ** * * * *
357365 TTGAAAAGGTTGTCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACACTTGTAGACTTT
1 TTGAAAAGGTTGCCACCAACTCATGTGAAC-TTTAAAAAAGTTGCCACCAACTCGTGTAGA-TTT
* ** * * * * * * * *
357430 TGAAAATGTTATCACCAACTCGTGCAAACTAT-GAAATGGTTGCCTCCAACTTC-TGTGGGCTTT
64 TGAAAAGGTTGCCACCAACTTGTGTAGACT-TCGAAAAGGTTACCACCAAC-TCATATAGGC---
357493 TGGA
124 T--A
* * * * * * * * * *
357497 CTTTTGAAAAGGTTGCCACCATCTCATGTGGACTTTGAAAAGGTTGACAGCAACTCATATGGTCT
1 ---TTGAAAAGGTTGCCACCAACTCATGTGAACTTTAAAAAAGTTGCCACCAACTCGTGTAG-AT
* * * * * * * * * * * * *
357562 TTTAAAAAAGCTGCGACCAA-TTCGTTTTTG-CATTTGTAAAGATTGCTACCAACTCATGTGGGC
62 TTTGAAAAGGTTGCCACCAACTT-G-TGTAGAC-TTCGAAAAGGTTACCACCAACTCATATAGGC
*
357625 TT
124 TA
* * * * **** *
357627 TTGAAAATGTTGCCACCAACTCGTGTGGACTTTGACTTTGTTGCCACCAACTCGTGT-GTACTTT
1 TTGAAAAGGTTGCCACCAACTCATGTGAACTTTAAAAAAGTTGCCACCAACTCGTGTAG-ATTTT
* * * * ** * * * * * *
357691 GACTATGG-TGCCACTAACTTGTATAGACTTTAAAAAAGTTTCCAGCAACTCGTGTCA-GCTT
65 GA-AAAGGTTGCCACCAACTTGTGTAGACTTCGAAAAGGTTACCACCAACTCATAT-AGGCTA
** * * * * ** * * ** * *
357752 TTGAAAATATT-ACACCCAACTCGTGTGGACTTTGACTATGGTGCCATAAACTCGTGTAAACTTT
1 TTGAAAAGGTTGCCA-CCAACTCATGTGAACTTTAAAAAAGTTGCCACCAACTCGTGTAGATTTT
* ** * * * * ** ** * *
357816 GTAAAGGTTGCCACCAACTCCTGTGGGCTTTTGAAAAGGTTGCCAAAAACTTGTTTGGGCT-
65 GAAAAGGTTGCCACCAACTTGTGTAGAC-TTCGAAAAGGTTACCACCAACTCATATAGGCTA
** * ** ** * * * * *
357877 TTGAAAATCTTGCCACCAATTCATGTGGATTTTTGTAAAGGGTGCCAACAACTCGTGTGTGCTTT
1 TTGAAAAGGTTGCCACCAACTCATGT-GAACTTTAAAAAAGTTGCCACCAACTCGTGT-AGATTT
* * * * *** * * * * *
357942 TGAAAAGGTTACCACCAACTCGTGTCGACCTTGGAAAAGGTTGTTACCAACTCGTGTGGGATT
64 TGAAAAGGTTGCCACCAACTTGTGTAGA-CTTCGAAAAGGTTACCACCAACTCATATAGGCTA
* ** * * * *
358005 TTGAAATAGTGTT---ACCAACTCGA-GTGGGACTTTAAAAGGGTTGCCACTAACTCGTTTGGGC
1 TTGAAA-AG-GTTGCCACCAACTC-ATGT-GAACTTTAAAAAAGTTGCCACCAACTCGTGT-AGA
* * * * *** * * * *
358066 TTTTGAAAAGGTTGCCAACAACTTGTGTGGATTTTGAAAAGGTTGTTACCAACCCGTCTGGGC-A
61 TTTTGAAAAGGTTGCCACCAACTTGTGTAGACTTCGAAAAGGTTACCACCAACTCATATAGGCTA
* * * ** * * * ** * *
358130 TTTGAAAAAGTTTCCAACAACTTGTGTGGACTTTGAAAAGGTTATCACCAACAC-TGTATGTTTT
1 -TTGAAAAGGTTGCCACCAACTCATGTGAACTTTAAAAAAGTTGCCACCAACTCGTGTA-GATTT
* * * * * * * * * *
358194 TTAAAAGATTGCCACCAACTCATGTG-CGATTTTGAAAAGGTTTCCACCAACTCGTGTGGGCTT
64 TGAAAAGGTTGCCACCAACT--TGTGTAGACTTCGAAAAGGTTACCACCAACTCATATAGGCTA
* * * ** * *** * *
358257 TTGAAAATGTTGCCAACAACTTATGTTG-ACTTCGAAAAGGTTATTACTAACTCGCGTAGACTTT
1 TTGAAAAGGTTGCCACCAACTCATG-TGAACTTTAAAAAAGTTGCCACCAACTCGTGTAGA-TTT
* * * *
358321 TGAAAAGGTTGCCACCAACTCT-CGCAGACTTTTGAAAAGGTTACCACCAATTCGTATGAATTTT
64 TGAAAAGGTTGCCACCAACT-TGTGTAGAC-TTCGAAAAGGTTACCACCAACTC--AT--A----
* *
358385 TGGGCTT
119 TAGGCTA
* * * * * * * **
358392 TTGAAAAGGTTGCCACCAACAT-GTGTGGACTTTGAAAAGGTTGCGATCAA-TGCGTGTGGGCTT
1 TTGAAAAGGTTGCCACCAAC-TCATGTGAACTTTAAAAAAGTTGCCACCAACT-CGTGTAGATTT
* * * * * * * * * * * *
358455 TAAATAAGGCTGCTACCAACTCGCGTGGGCTTTTGAAATGGTTCCCATCAACTCATGTAGGC-A
64 TGAA-AAGGTTGCCACCAACTTGTGTAGAC-TTCGAAAAGGTTACCACCAACTCATATAGGCTA
* * * * * * * ** * * ** * *
358518 TTTGAAAATGTTACCACGATCTCGTGTGGACTTTGACTATGGTGCCACCAACTTTTATAGACTTT
1 -TTGAAAAGGTTGCCACCAACTCATGTGAACTTTAAAAAAGTTGCCACCAACTCGTGTAGATTTT
* * * *
358583 GAAAAAGTTGCCACCAACTAATGTG-AG-CTTCTGAAAATGTT---A--GACT--T-T-GACTA
65 GAAAAGGTTGCCACCAACT--TGTGTAGACTTC-GAAAAGGTTACCACCAACTCATATAGGCTA
* ** * * * * * *
358636 -T-----GG-TGCTAAAAACTCGTGTGAACTTTGAAAAGGTTACCACCAACTCATGTGGACTTTT
1 TTGAAAAGGTTGCCACCAACTCATGTGAACTTTAAAAAAGTTGCCACCAACTCGTGTAGA-TTTT
* * * * ** * * *
358694 -AAAATAGTTGCCACCAACTTATGTAGATTTTTGAAAATATTACCACCAACTCGTGTGGGCCT-
65 GAAAA-GGTTGCCACCAACTTGTGTAGA-CTTCGAAAAGGTTACCACCAACTCATATAGG-CTA
* * ** * * * *
358756 TTGAAAAGGTTGCTAGCAACTCATGTGGGCTTTTAAAAATGTTGCCACTAACTCATGTATATTTT
1 TTGAAAAGGTTGCCACCAACTCATGTGAAC-TTTAAAAAAGTTGCCACCAACTCGTGTAGA-TTT
* ** * * * * * * * * * * *
358821 TAAAAATATTACCACCAACTCGTGTGAGCCTTTGAAAAGGTTGCTACTAACTCGTGTAGGATT
64 TGAAAAGGTTGCCACCAACTTGTGT-AGACTTCGAAAAGGTTACCACCAACTCATATAGGCTA
* * * * * * * *
358884 TTGAAAAGGTTCCCACCAACTCGA-GTGGGATTTTGAAAAGGTTACCACCAACTCGTGTGGGCTT
1 TTGAAAAGGTTGCCACCAACTC-ATGT-GAACTTTAAAAAAGTTGCCACCAACTCGTGT-AGATT
* * * * * ** * *** *
358948 GTGAAAAGGTTGCCAACAACTTGTGTGGATTTTGAAAAGGTTGTCACTAACTCGGGTAGGCTT
63 TTGAAAAGGTTGCCACCAACTTGTGTAGACTTCGAAAAGGTTACCACCAACTCATATAGGCTA
* * * * * * *
359011 TTGAAAAGGTTGCCACCAACT-ATTATAGAATTTTAAAAAGGTTACCACTAACTCGTGTGGACTT
1 TTGAAAAGGTTGCCACCAACTCA-TGT-GAACTTTAAAAAAGTTGCCACCAACTCGTGTAGATTT
* * * * * *
359075 TGAAATGGTTACCACCAA-TTCGTGTGAGCTTTTAGGCTTTTGAAAAGGTTGCCACCAACTCTTG
64 TGAAAAGGTTGCCACCAACTT-GTGT-AG-----A--C-TTCGAAAAGGTTACCACCAACTCATA
*
359139 T-GGACTT
119 TAGG-CTA
* * * * * * *
359146 TTG-AAAGGTTGCCATCAATTCCTATGGACTTTGAAATAGTTGCCACCAACTCGTGTAGAGTTTT
1 TTGAAAAGGTTGCCACCAACTCATGTGAACTTTAAAAAAGTTGCCACCAACTCGTGTAGA-TTTT
* * * * ** * * * * * *
359210 GAAAAAGTTGCTACCAACTCGTGTGGGTTTTTGAAAAGGTTGCCACTAACTCGTGT-GGACTT
65 GAAAAGGTTGCCACCAACTTGTGT-AGACTTCGAAAAGGTTACCACCAACTCATATAGG-CTA
* * * ** * *
359272 TTTAAAAGGTTGCCAACAACTCACGTGGGCTTT-GAAAAGATTGCCACCAACTCGTGTCGACTTT
1 TTGAAAAGGTTGCCACCAACTCATGTGAACTTTAAAAAAG-TTGCCACCAACTCGTGTAGA-TTT
* * * * * * * * * * *** * *
359336 TGAAAAGGTTACCACAAACTCATGTG-GGCCTTTGAAAAAGTTGCTACCAACACGTGCGGGATT
64 TGAAAAGGTTGCCACCAACT--TGTGTAGACTTCGAAAAGGTTACCACCAACTCATATAGGCTA
* * * * * * ** * *
359399 TTGAAAAGGTTACCACCAACTCGTGCGGGATTTTGAAAAAGTTATCACCAACTCAAGTG-GGCTT
1 TTGAAAAGGTTGCCACCAACTCATG-TGAACTTTAAAAAAGTTGCCACCAACTC--GTGTAGATT
* * * * * * ** * * * *
359463 TCGAAAAGATTGCTAACAACTTGTGCAGACTTTGAAAAGGTTATTACCAACTCGTGTAAGCTT
63 TTGAAAAGGTTGCCACCAACTTGTGTAGACTTCGAAAAGGTTACCACCAACTCATATAGGCTA
* * * * * * **
359526 TTGAAAAGGTTACCACCAACTCTTGT-AGACTTTTCAAAATA-TTACCACCAACTCGTATGGACA
1 TTGAAAAGGTTGCCACCAACTCATGTGA-AC-TTT-AAAAAAGTTGCCACCAACTCGTGTAGATT
** * * * * *
359589 TTGAAATA-GTTGCTTCCAACTCTTGTGCGCTTTTGAGCATTTGAAAAGGTTGCCACAAACTCTT
63 TTGAAA-AGGTTGCCACCAA--CTTGT--G---TAGA-C-TTCGAAAAGGTTACCACCAACTCAT
* *
359653 ATAGACTT
118 ATAGGCTA
** * * * * * * *
359661 TTGAAAATATTGCCAACAACAT-GTGTGGACTTTGAAAAGGTTGTCACCAACTCGTGTGAGCTTT
1 TTGAAAAGGTTGCCACCAAC-TCATGTGAACTTTAAAAAAGTTGCCACCAACTCGTGT-AGATTT
* ** * * * ** * *
359725 TGAAAAGGTTGCTACCAACTCATGTAGGATTTTGAAAAGGTTGCCACCAACTTGTGT-GAGCTT
64 TGAAAAGGTTGCCACCAACTTGTGTA-GACTTCGAAAAGGTTACCACCAACTCATATAG-GCTA
* * * * * * *
359788 TTGAAAAGGTTGCTACCAACTCATGTAGGATTTTGAAAAGGTTGCCACCAACTCATGTGAGCTTT
1 TTGAAAAGGTTGCCACCAACTCATGT-GAACTTTAAAAAAGTTGCCACCAACTCGTGT-AGATTT
* ** * * * *
359853 TGAAATGGTTGTGACCAACTCT-CGTAGACTTTTGAAAATGTTGCCACCAACTC
64 TGAAAAGGTTGCCACCAACT-TGTGTAGAC-TTCGAAAAGGTTACCACCAACTC
359906 GTGCAAACTT
Statistics
Matches: 3928, Mismatches: 1001, Indels: 533
0.72 0.18 0.10
Matches are distributed among these distances:
109 3 0.00
110 41 0.01
111 26 0.01
112 2 0.00
114 1 0.00
116 4 0.00
117 2 0.00
118 3 0.00
119 2 0.00
120 1 0.00
121 6 0.00
123 1 0.00
124 55 0.01
125 666 0.17
126 1012 0.26
127 1227 0.31
128 367 0.09
129 28 0.01
130 6 0.00
131 2 0.00
132 3 0.00
133 79 0.02
134 162 0.04
135 227 0.06
136 2 0.00
ACGTcount: A:0.28, C:0.20, G:0.21, T:0.31
Consensus pattern (125 bp):
TTGAAAAGGTTGCCACCAACTCATGTGAACTTTAAAAAAGTTGCCACCAACTCGTGTAGATTTTG
AAAAGGTTGCCACCAACTTGTGTAGACTTCGAAAAGGTTACCACCAACTCATATAGGCTA
Found at i:357834 original size:94 final size:94
Alignment explanation
Indices: 357673--357852 Score: 236
Period size: 94 Copynumber: 1.9 Consensus size: 94
357663 TTTGTTGCCA
* * * * *
357673 CCAACTCGTGTGTACTTTGACTATGGTGCCACTAACTTGTATAGACTTTAAAAAAGTTTCCAGCA
1 CCAACTCGTGTGGACTTTGACTATGGTGCCACTAACTCGTATAAACTTTAAAAAAGTTGCCACCA
*
357738 ACTCGTGTCAGCTTTTGAAAATATTACAC
66 ACTCCTGTCAGCTTTTGAAAATATTACAC
* ** *
357767 CCAACTCGTGTGGACTTTGACTATGGTGCCA-TAAACTCGTGTAAACTTTGTAAAGGTTGCCACC
1 CCAACTCGTGTGGACTTTGACTATGGTGCCACT-AACTCGTATAAACTTTAAAAAAGTTGCCACC
**
357831 AACTCCTGTGGGCTTTTGAAAA
65 AACTCCTGTCAGCTTTTGAAAA
357853 GGTTGCCAAA
Statistics
Matches: 73, Mismatches: 12, Indels: 2
0.84 0.14 0.02
Matches are distributed among these distances:
93 1 0.01
94 72 0.99
ACGTcount: A:0.28, C:0.22, G:0.19, T:0.32
Consensus pattern (94 bp):
CCAACTCGTGTGGACTTTGACTATGGTGCCACTAACTCGTATAAACTTTAAAAAAGTTGCCACCA
ACTCCTGTCAGCTTTTGAAAATATTACAC
Found at i:359200 original size:102 final size:103
Alignment explanation
Indices: 359004--359209 Score: 265
Period size: 102 Copynumber: 2.0 Consensus size: 103
358994 CTAACTCGGG
* *
359004 TAGGCTTTTGAAAAGGTTGCCACCAACTATTATAGAATTTTAAAAAGGTTACCACTAACTCGTGT
1 TAGGCTTTTGAAAAGGTTGCCACCAACTATTATAGAATTTTAAAAAGGTTACCACTAACTCCTAT
* *
359069 GGACTTTGAAATGGTTACCACCAATTCGTGT-GAGCTTT
66 GGACTTTGAAATAGTTACCACCAACTCGTGTAGAG-TTT
* * * * * * *
359107 TAGGCTTTTGAAAAGGTTGCCACCAACTCTTGTGGACTTTT-GAAAGGTTGCCA-TCAATTCCTA
1 TAGGCTTTTGAAAAGGTTGCCACCAACTATTATAGAATTTTAAAAAGGTTACCACT-AACTCCTA
*
359170 TGGACTTTGAAATAGTTGCCACCAACTCGTGTAGAGTTT
65 TGGACTTTGAAATAGTTACCACCAACTCGTGTAGAGTTT
359209 T
1 T
359210 GAAAAAGTTG
Statistics
Matches: 89, Mismatches: 12, Indels: 5
0.84 0.11 0.05
Matches are distributed among these distances:
101 1 0.01
102 48 0.54
103 40 0.45
ACGTcount: A:0.28, C:0.18, G:0.20, T:0.33
Consensus pattern (103 bp):
TAGGCTTTTGAAAAGGTTGCCACCAACTATTATAGAATTTTAAAAAGGTTACCACTAACTCCTAT
GGACTTTGAAATAGTTACCACCAACTCGTGTAGAGTTT
Found at i:359212 original size:197 final size:198
Alignment explanation
Indices: 358914--359272 Score: 474
Period size: 197 Copynumber: 1.8 Consensus size: 198
358904 TCGAGTGGGA
* * * *
358914 TTTTGAAAAGGTTACCACCAACTCGTGTGGGCTTGTGAAAAGGTTGCCAACAACTTGTGTGGATT
1 TTTTGAAAAGGTTACCACCAACTCGTGTGGACTTGTGAAAAGGTTGCCAACAACTTCTATGGACT
* * * *
358979 TTGAAAAGGTTGTCACTAACTCGGGTAGGCTTTTGAAAAGGTTGCCACCAACTATTATAGAATTT
66 TTGAAAAGGTTGCCACCAACTCGGGTAGGCTTTTGAAAAAGTTGCCACCAACTAGTATAGAATTT
359044 TAAAAAGGTTACCACTAACTCGTGTGGACTTTGAAATGGTTACCACCAATTCGTGTGAGCTTTTA
131 TAAAAAGGTTACCACTAACTCGTGTGGACTTTGAAATGGTTACCACCAATTCGTGTGAGCTTTTA
359109 GGC
196 GGC
* * * *
359112 TTTTGAAAAGGTTGCCACCAACTCTTGTGGACTTTTG-AAAGGTTGCCATCAA-TTCCTATGGAC
1 TTTTGAAAAGGTTACCACCAACTCGTGTGGACTTGTGAAAAGGTTGCCAACAACTT-CTATGGAC
* * * * * **
359175 TTTGAAATA-GTTGCCACCAACTCGTGTAGAG-TTTTGAAAAAGTTGCTACCAACTCGTGTGGGT
65 TTTGAAA-AGGTTGCCACCAACTCGGGTAG-GCTTTTGAAAAAGTTGCCACCAACTAGTATAGAA
* *
359238 TTTTGAAAAGGTTGCCACTAACTCGTGTGGACTTT
128 TTTTAAAAAGGTTACCACTAACTCGTGTGGACTTT
359273 TTAAAAGGTT
Statistics
Matches: 137, Mismatches: 21, Indels: 7
0.83 0.13 0.04
Matches are distributed among these distances:
196 2 0.01
197 100 0.73
198 35 0.26
ACGTcount: A:0.27, C:0.18, G:0.23, T:0.32
Consensus pattern (198 bp):
TTTTGAAAAGGTTACCACCAACTCGTGTGGACTTGTGAAAAGGTTGCCAACAACTTCTATGGACT
TTGAAAAGGTTGCCACCAACTCGGGTAGGCTTTTGAAAAAGTTGCCACCAACTAGTATAGAATTT
TAAAAAGGTTACCACTAACTCGTGTGGACTTTGAAATGGTTACCACCAATTCGTGTGAGCTTTTA
GGC
Found at i:359571 original size:159 final size:158
Alignment explanation
Indices: 358836--359581 Score: 501
Period size: 159 Copynumber: 4.7 Consensus size: 158
358826 ATATTACCAC
* * * * * * * * *
358836 CAACTCGTGT-GAGCCTTTGAAAAGGTTGCTACTAACTCGTGTAGGATTTTGAAAAGGTTCCCAC
1 CAACTCGTGTCGA-CTTTTGAAAAGGTTACCACCAACTCGTGTAAGCTTTTGAAAAAGTTGCTAC
* * * *
358900 CAACTCGAGTGGGATTTTGAAAAGGTTACCACCAACTCGTGTGGG-CTTGTGAAAAGGTTGCCAA
65 CAACTCGTGT-GGATTTTGAAAAGGTTACCACCAACTCGTG-GGGACTTTTGAAAAAGTTACCAA
*** ** * *
358964 CAACTTGTGTGGATTTTGAAAAGGTTGTC-A
128 CAACTCAAGTGGGCTTTGAAAAGATTGCCAA
* * * * * * *
358994 CTAACTCGGGTAGGCTTTTGAAAAGGTTGCCACCAACT-AT-TATAGAATTTT-AAAAAGGTTAC
1 C-AACTCGTGTCGACTTTTGAAAAGGTTACCACCAACTCGTGTA-AG-CTTTTGAAAAA-GTTGC
* * * * * *
359056 CACTAACTCGTGTGGACTTTGAAATGGTTACCACCAATTCGTGTGAGCTTTTAGGCTTTTGAAAA
62 TACCAACTCGTGTGGATTTTGAAAAGGTTACCACCAACTCGTG-G-G------GACTTTTGAAAA
* * * ** * * *
359121 GGTTGCCACCAACTCTTGTGGACTTTTG-AAAGGTTGCCAT
119 AGTTACCAACAACTCAAGTGGGC-TTTGAAAAGATTGCCAA
* * * * *
359161 CAATTCCTATGGAC-TTTGAAATA-GTTGCCACCAACTCGTGTAGAG-TTTTGAAAAAGTTGCTA
1 CAACTCGTGTCGACTTTTGAAA-AGGTTACCACCAACTCGTGTA-AGCTTTTGAAAAAGTTGCTA
* * * * * * *
359223 CCAACTCGTGTGGGTTTTTGAAAAGGTTGCCACTAACTCGTGTGGACTTTTTAAAAGGTTGCCAA
64 CCAACTCGTGT-GGATTTTGAAAAGGTTACCACCAACTCGTGGGGACTTTTGAAAAAGTTACCAA
* *
359288 CAACTCACGTGGGCTTTGAAAAGATTGCCAC
128 CAACTCAAGTGGGCTTTGAAAAGATTGCCAA
* * ** *
359319 CAACTCGTGTCGACTTTTGAAAAGGTTACCACAAACTCATGTGGGCCTTTGAAAAAGTTGCTACC
1 CAACTCGTGTCGACTTTTGAAAAGGTTACCACCAACTCGTGTAAGCTTTTGAAAAAGTTGCTACC
* * * *
359384 AACACGTGCGGGATTTTGAAAAGGTTACCACCAACTCGTGCGGGA-TTTTGAAAAAGTTATCACC
66 AACTCGTG-TGGATTTTGAAAAGGTTACCACCAACTCGTG-GGGACTTTTGAAAAAGTTACCAAC
*
359448 AACTCAAGTGGGCTTTCGAAAAGATTGCTAA
129 AACTCAAGTGGGCTTT-GAAAAGATTGCCAA
* ** * * *
359479 CAACTTGTG-CAGAC-TTTGAAAAGGTTATTACCAACTCGTGTAAGCTTTTGAAAAGGTTACCAC
1 CAACTCGTGTC-GACTTTTGAAAAGGTTACCACCAACTCGTGTAAGCTTTTGAAAAAGTTGCTAC
* * * **
359542 CAACTCTTGTAGACTTTTCAAAATATTACCACCAACTCGT
65 CAACTCGTGTGGA-TTTTGAAAAGGTTACCACCAACTCGT
359582 ATGGACATTG
Statistics
Matches: 470, Mismatches: 89, Indels: 57
0.76 0.14 0.09
Matches are distributed among these distances:
157 6 0.01
158 89 0.19
159 223 0.47
160 27 0.06
164 1 0.00
165 40 0.09
166 75 0.16
167 9 0.02
ACGTcount: A:0.29, C:0.20, G:0.22, T:0.30
Consensus pattern (158 bp):
CAACTCGTGTCGACTTTTGAAAAGGTTACCACCAACTCGTGTAAGCTTTTGAAAAAGTTGCTACC
AACTCGTGTGGATTTTGAAAAGGTTACCACCAACTCGTGGGGACTTTTGAAAAAGTTACCAACAA
CTCAAGTGGGCTTTGAAAAGATTGCCAA
Found at i:359711 original size:103 final size:103
Alignment explanation
Indices: 359525--359727 Score: 259
Period size: 103 Copynumber: 2.0 Consensus size: 103
359515 CGTGTAAGCT
* * *
359525 TTTGAAAAGGTTACCACCAACTCTTGTAGACTTTTCAAAATATTACCACCAACTCGTATGGACAT
1 TTTGAAAAGGTTACCACAAACTCTTATAGACTTTTCAAAATATTACCAACAACTCGTATGGACAT
* * *
359590 TGAAATAGTTGCTTCCAACTCTTGTGCGCTTTTGAGCA
66 TGAAATAGTTGCTACCAACTCGTGTGAGCTTTTGAGCA
* * * * *
359628 TTTGAAAAGGTTGCCACAAACTCTTATAGACTTTTGAAAATATTGCCAACAACAT-GTGTGGACT
1 TTTGAAAAGGTTACCACAAACTCTTATAGACTTTTCAAAATATTACCAACAAC-TCGTATGGACA
359692 TTGAAA-AGGTTG-TCACCAACTCGTGTGAGCTTTTGA
65 TTGAAATA-GTTGCT-ACCAACTCGTGTGAGCTTTTGA
359728 AAAGGTTGCT
Statistics
Matches: 86, Mismatches: 11, Indels: 6
0.83 0.11 0.06
Matches are distributed among these distances:
102 2 0.02
103 83 0.97
104 1 0.01
ACGTcount: A:0.30, C:0.20, G:0.18, T:0.33
Consensus pattern (103 bp):
TTTGAAAAGGTTACCACAAACTCTTATAGACTTTTCAAAATATTACCAACAACTCGTATGGACAT
TGAAATAGTTGCTACCAACTCGTGTGAGCTTTTGAGCA
Found at i:360017 original size:71 final size:71
Alignment explanation
Indices: 359883--360018 Score: 159
Period size: 71 Copynumber: 1.9 Consensus size: 71
359873 CTCGTAGACT
* * * * * *
359883 TTTGAAAATGTTGCCACCAACTCGTGCAAACTTTGAAATGGTTGCCTCCAACTTGTATGGGCTTT
1 TTTGAAAAGGTTGCCACCAACTCGTGCAAACTTTGAAAAGATTGCATCCAACTCGTATAGGCTTT
359948 TGGACC
66 TGGACC
** *
359954 TTTGAAAAGGTTGCCA-CAATCTCGTGTGAACTTTGAAAAGATTGACAT-CAACTCGTGTAGGCT
1 TTTGAAAAGGTTGCCACCAA-CTCGTGCAAACTTTGAAAAGATTG-CATCCAACTCGTATAGGCT
360017 TT
64 TT
360019 AAAAAAAGCT
Statistics
Matches: 54, Mismatches: 9, Indels: 4
0.81 0.13 0.06
Matches are distributed among these distances:
70 3 0.06
71 49 0.91
72 2 0.04
ACGTcount: A:0.26, C:0.20, G:0.21, T:0.32
Consensus pattern (71 bp):
TTTGAAAAGGTTGCCACCAACTCGTGCAAACTTTGAAAAGATTGCATCCAACTCGTATAGGCTTT
TGGACC
Found at i:360900 original size:95 final size:93
Alignment explanation
Indices: 360492--360997 Score: 271
Period size: 95 Copynumber: 5.3 Consensus size: 93
360482 GTAAGATTTT
* * * * *
360492 AAAAGGGTTGCCACCAACTTGTGTAGG-CTTTTGAAAAGGTTGCCAACAACTTGTGTGGATTTTG
1 AAAA-GGTTGCCACCAACTCGTGT-GGACTTTTGAAAAGGTTACCAAAAACTTATG-GGCTTTTG
* * * * *
360556 AAAAGGTT-TTCACCAACCCGTGTGGGCTTTTG
63 AAAAGGTTGCT-ACTAACACATGTGGAC-TTTG
* * ** * * * * *
360588 AAAAAGTTTCCAATAACTTGTGTGGAC-ATTGAAAAGGTTGTCACC-AACAC-TGTGGGTTTTTG
1 AAAAGGTTGCCACCAACTCGTGTGGACTTTTGAAAAGG-T-T-ACCAAAAACTTATGGGCTTTTG
* * *
360650 AAAAGATTGCTACTAACTCATGTGCGATTTTG
63 AAAAGGTTGCTACTAACACATGTG-GACTTTG
* * * * *
360682 AAAAGGTTGCCACCAACTAGTGTGGGCTTTTGAAAAGGTTGCCAACAACTTATGTTGAC-TTTGA
1 AAAAGGTTGCCACCAACTCGTGTGGACTTTTGAAAAGGTTACCAAAAACTTATG--GGCTTTTGA
* * * * *
360746 AAATGTTGTTACTAGCTCGCATG-GG-CTTTCA
64 AAAGGTTGCTACTA--ACACATGTGGACTTT-G
*
360777 AAAAGGTTGCCACCAACTC-TCGTAGACTTTTGAAAAGGTTACCACAAAATCTTATGGGCTTTTG
1 AAAAGGTTGCCACCAACTCGT-GTGGACTTTTGAAAAGGTTACCA-AAAA-CTTATGGGCTTTTG
* *
360841 AAAGGGTTGCCACTAACACATGTGGACTTTG
63 AAAAGGTTGCTACTAACACATGTGGACTTTG
* * * ** * *
360872 AAAAGGTTGCCATCAACGCGTGTGGAC-TTTAAATAAGGCTCCTACC-AACTCGTGTGGGCTTTT
1 AAAAGGTTGCCACCAACTCGTGTGGACTTTTGAA-AAGG-T--TACCAAAAACTTATGGGCTTTT
* * * * *
360935 GAAATA-GTTCCTATTAACTCATGTGGGCTTTTA
62 GAAA-AGGTTGCTACTAACACATGTGGAC-TTTG
* * *
360968 AAAATGTTGCCACTAACTCGCGTGGACTTT
1 AAAAGGTTGCCACCAACTCGTGTGGACTTT
360998 GACTATGGTG
Statistics
Matches: 313, Mismatches: 69, Indels: 55
0.72 0.16 0.13
Matches are distributed among these distances:
92 2 0.01
93 4 0.01
94 78 0.25
95 149 0.48
96 61 0.19
97 15 0.05
98 4 0.01
ACGTcount: A:0.28, C:0.18, G:0.23, T:0.31
Consensus pattern (93 bp):
AAAAGGTTGCCACCAACTCGTGTGGACTTTTGAAAAGGTTACCAAAAACTTATGGGCTTTTGAAA
AGGTTGCTACTAACACATGTGGACTTTG
Found at i:361978 original size:95 final size:93
Alignment explanation
Indices: 361869--363082 Score: 382
Period size: 95 Copynumber: 12.8 Consensus size: 93
361859 TGGGCTTTTA
* * * * *
361869 AAAAGGTTACCACCAACTCGTGTGGGTTTTTGTAAAAGTTACCACCAACTCATGAGAGCTTTTAA
1 AAAAGGTTGCCACCAACTCGTGTGGGCTTTTG-AAAAGTTGCCACCAACT-ATGTGAGCTTTTGA
361934 AAAGGTTGCTAACAACTTGTGTAGGCTTTG
64 AAAGGTTGCTAACAACTTGTGTAGGCTTTG
* * *
361964 AAAAGGTTGCCACCAACTCGTGTGGACTTTTGAAAATGTTGCCAACAACT-TGTGTGGAC-TTTG
1 AAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAA-GTTGCCACCAACTATGTG-AG-CTTTTG
* * *
362027 AAAAGGTTG-TCACCAACTCGTGT-GAGCTTTCA
63 AAAAGGTTGCT-AACAACTTGTGTAG-GCTTT-G
* * * * * *
362059 AAAAGGTTGCTACTAACTCATGTGGGATTTTGAAAGGGTTGCCACCAACTTTGTGAGCTTTTGAA
1 AAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAA-AGTTGCCACCAACTATGTGAGCTTTTGAA
* * *
362124 AAGGTTGCCAATAACTTAGTGGA-G-TTTG
65 AAGGTTGCTAACAACTT-GTGTAGGCTTTG
* * * * * * *
362152 AAAAAGTTGTCA-CAACTCGTTTGGGCTTTTGAAAAGGTTGCGAGCAACTCTCG-CAGACTTTTG
1 AAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAA-GTTGCCACCAACTAT-GTGAG-CTTTTG
* * * * * * **
362215 AACATGTTGCCACCAACTCGTGCAAACTTTG
63 AAAAGGTTGCTAACAACTTGTGTAGGCTTTG
* * * * * * *
362246 AAATGGTTGCCTCCAACTTGTGTGGGCTTTTGGACCTTTGAAAAAGTTACCACCATCTCGTGTGG
1 AAAAGGTTGCCACCAACTCGTGTGGGC---T-----TTTG-AAAAGTTGCCACCAACT-ATGTGA
* * * * *
362311 GC-TTTGAAAAGATTGAC-ATCAACTCGTGTGGGCTTTAA
56 GCTTTTGAAAAGGTTG-CTAACAACTTGTGTAGGCTTT-G
* * * ** * * *
362349 AAAAAGATGCGACCAACTCGTGTTTGCTTTTGAAAAGGTTGCTACCAACTTATATGGGCTTTTGA
1 AAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAA-GTTGCCACCAAC-TATGTGAGCTTTTGA
* * * * *
362414 AAATGTTACCACCAACTCGTGT-GGACTTTG
64 AAAGGTTGCTAACAACTTGTGTAGG-CTTTG
**** ** * * * * * * *
362444 ACTTTGTTGCCACCAACTCGTGTGTAC-TATGACTATGGTGCCACTAACT-TGTATAGAC-TTTA
1 AAAAGGTTGCCACCAACTCGTGTGGGCTTTTGA-AAAGTTGCCACCAACTATGT-GAG-CTTTTG
* * * *
362506 AAAAGGTTACCAACAACTCGTGTCGGCTTTTG
63 AAAAGGTTGCTAACAACTTGTGTAGGC-TTTG
** * * * * * ** * *
362538 AAAATATT-ACACCCAACTCGTGTGGAC-TTTGACTATGGTGCCATAAACTCGTGTGAAC-TTTG
1 AAAAGGTTGCCA-CCAACTCGTGTGGGCTTTTGA-AAAGTTGCCACCAACT-ATGTGAGCTTTTG
* * * *
362600 TAAAGGTTGCCACCAACTCGTGT-GGACTTTTG
63 AAAAGGTTGCTAACAACTTGTGTAGG-C-TTTG
* * * * * * * *
362632 AAAAAGCTGCCAACAACGT-GTTTGGGC-TTTAAAAATCTTACCACCAACTCGTGTG-GACTTTT
1 AAAAGGTTGCCACCAAC-TCGTGTGGGCTTTTGAAAA-GTTGCCACCAACT-ATGTGAG-CTTTT
* * * * * *
362694 GCAAAGGGTACCACCAACTTGTGTATGCTATTG
62 GAAAAGGTTGCTAACAACTTGTGTAGGCT-TTG
* * * * ** *
362727 AAAAGATTACCACCAACTCGTGTGGGCCTTAGAAAAGGTTGTTACCAACTCATGTGAGATTTTGA
1 AAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAA-GTTGCCACCAACT-ATGTGAGCTTTTGA
* * * * * * * *
362792 AATGG-TGTTACCAACTCGAGTGGGATTTT
64 AAAGGTTGCTAACAACTTGTGTAGGCTTTG
* * * * * *
362821 AAAAGGGTTGCCACCAACTTGTGTAGGCTTTTGAAAAGGTTGCCAACACCT-TGTGTGGATTTTG
1 AAAA-GGTTGCCACCAACTCGTGTGGGCTTTTGAAAA-GTTGCCACCAACTATGTG-AGCTTTTG
* * ** *
362885 AAAAGGTT-TTCACCAACCCGTGTGGGCTTTTG
63 AAAAGGTTGCT-AACAACTTGTGTAGGC-TTTG
* * ** * * * * *
362917 AAAAAGTTTCCAATAACTTGTGTGGAC-TTTGAAAAGGTTGTCACCAAC-ACTGTGGGTTTTTGA
1 AAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAA-GTTGCCACCAACTA-TGTGAGCTTTTGA
* **
362980 AAAGATTGCT-ACTAACTCATGTGT-GATTTTG
64 AAAGGTTGCTAAC-AACT--TGTGTAGGCTTTG
* *
363011 AAAAGGTTGCCACCAACTAGTGTGGGCTTTTGAAAAGGTTGCCAACAACTAATGTTGA-C-TTTG
1 AAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAA-GTTGCCACCAACT-ATG-TGAGCTTTTG
*
363074 AAAATGTTG
63 AAAAGGTTG
363083 TTACTAGCTC
Statistics
Matches: 838, Mismatches: 211, Indels: 140
0.70 0.18 0.12
Matches are distributed among these distances:
92 38 0.05
93 72 0.09
94 255 0.30
95 323 0.39
96 79 0.09
97 4 0.00
98 1 0.00
100 1 0.00
102 24 0.03
103 35 0.04
104 6 0.01
ACGTcount: A:0.28, C:0.19, G:0.22, T:0.31
Consensus pattern (93 bp):
AAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGTTGCCACCAACTATGTGAGCTTTTGAAA
AGGTTGCTAACAACTTGTGTAGGCTTTG
Found at i:362556 original size:94 final size:94
Alignment explanation
Indices: 362413--362635 Score: 240
Period size: 94 Copynumber: 2.4 Consensus size: 94
362403 TGGGCTTTTG
* * *** * * *
362413 AAAATGTTACCACCAACTCGTGTGGAC-TTTGACTTTGTTGC-CACCAACTCGTGTGTACTATGA
1 AAAAGGTTACCAACAACTCGTGTGGACTTTTGAAAATATTACAC-CCAACTCGTGTGGACTATGA
*
362476 CTATGGTGCCACT-AACTTGTAT-AGACTTTA
65 CTATGGTGCCA-TAAACTCGTATGA-ACTTTA
*
362506 AAAAGGTTACCAACAACTCGTGTCGG-CTTTTGAAAATATTACACCCAACTCGTGTGGACTTTGA
1 AAAAGGTTACCAACAACTCGTGT-GGACTTTTGAAAATATTACACCCAACTCGTGTGGACTATGA
* *
362570 CTATGGTGCCATAAACTCGTGTGAACTTTG
65 CTATGGTGCCATAAACTCGTATGAACTTTA
* * *
362600 TAAAGGTTGCCACCAACTCGTGTGGACTTTTGAAAA
1 AAAAGGTTACCAACAACTCGTGTGGACTTTTGAAAA
362636 AGCTGCCAAC
Statistics
Matches: 109, Mismatches: 15, Indels: 11
0.81 0.11 0.08
Matches are distributed among these distances:
93 25 0.23
94 82 0.75
95 2 0.02
ACGTcount: A:0.28, C:0.22, G:0.20, T:0.31
Consensus pattern (94 bp):
AAAAGGTTACCAACAACTCGTGTGGACTTTTGAAAATATTACACCCAACTCGTGTGGACTATGAC
TATGGTGCCATAAACTCGTATGAACTTTA
Found at i:362611 original size:125 final size:125
Alignment explanation
Indices: 362405--362692 Score: 318
Period size: 125 Copynumber: 2.3 Consensus size: 125
362395 AACTTATATG
* * * * *
362405 GGCTTTTGAAAATGTTACCACCAACTCGTGTGGACTTTGACTTTGTTGCCACCAACTCGTGTGTA
1 GGCTTTTGAAAATATTACCACCAACTCGTGTGGACTTTGACTATGGTGCCACAAACTCGTGTGAA
* * * *
362470 CTATGACTATGGTGCCACTAACTTGTATAGAC-TTT-AAAAAGGTTACCAACAAC-TCGTGTC
66 CTATGAC-AAGGTGCCACCAACTCGTATAGACTTTTGAAAAA-GCTACCAACAACGT-GTGTC
*
362530 GGCTTTTGAAAATATTA-CACCCAACTCGTGTGGACTTTGACTATGGTGCCATAAACTCGTGTGA
1 GGCTTTTGAAAATATTACCA-CCAACTCGTGTGGACTTTGACTATGGTGCCACAAACTCGTGTGA
* * * * * *
362594 ACTTTGTA-AAGGTTGCCACCAACTCGTGTGGACTTTTGAAAAAGCTGCCAACAACGTGTTTG
65 ACTATG-ACAAGG-TGCCACCAACTCGTATAGACTTTTGAAAAAGCTACCAACAACGTGTGTC
* *
362656 GGC-TTTAAAAATCTTACCACCAACTCGTGTGGACTTT
1 GGCTTTTGAAAATATTACCACCAACTCGTGTGGACTTT
362693 TGCAAAGGGT
Statistics
Matches: 138, Mismatches: 18, Indels: 14
0.81 0.11 0.08
Matches are distributed among these distances:
124 5 0.04
125 105 0.76
126 22 0.16
127 6 0.04
ACGTcount: A:0.27, C:0.22, G:0.20, T:0.31
Consensus pattern (125 bp):
GGCTTTTGAAAATATTACCACCAACTCGTGTGGACTTTGACTATGGTGCCACAAACTCGTGTGAA
CTATGACAAGGTGCCACCAACTCGTATAGACTTTTGAAAAAGCTACCAACAACGTGTGTC
Found at i:363088 original size:95 final size:96
Alignment explanation
Indices: 362724--363145 Score: 344
Period size: 95 Copynumber: 4.4 Consensus size: 96
362714 GTGTATGCTA
* * * * * ** * * *
362724 TTGAAAAGATTACCACCAACTCGTGTGGGCCTTAGAAAAGGTTGTTACCAACTCATGTGAGATTT
1 TTGAAAAGGTTGCCACCAACTTGTGTGGGCTTTTGAAAAGGTTGCCAACAACTAATGTGGGATTT
*
362789 TG-AAATGGTGTTACCAACTCGA-GTGGGATT
66 TGAAAATGTTGTTACCAACTC-ATGTGGGATT
* *
362819 TT-AAAAGGGTTGCCACCAACTTGTGTAGGCTTTTGAAAAGGTTGCCAACACCT--TGTGTGGAT
1 TTGAAAA-GGTTGCCACCAACTTGTGTGGGCTTTTGAAAAGGTTGCCAACAACTAATGTG-GGAT
* * * *
362881 TTTGAAAAGGTT-TTCACCAACCCGTGTGGGCTT
64 TTTGAAAATGTTGTT-ACCAACTCATGTGGGATT
* * ** * * * * *
362914 TTGAAAAAGTTTCCAATAACTTGTGTGGAC-TTTGAAAAGGTTGTCACCAAC-ACTGTGGGTTTT
1 TTGAAAAGGTTGCCACCAACTTGTGTGGGCTTTTGAAAAGGTTGCCAACAACTAATGTGGGATTT
* * *
362977 TGAAAA-GATTGCTACTAACTCATGTGTGATT
66 TGAAAATG-TTGTTACCAACTCATGTGGGATT
* * *
363008 TTGAAAAGGTTGCCACCAACTAGTGTGGGCTTTTGAAAAGGTTGCCAACAACTAATGT-TGACTT
1 TTGAAAAGGTTGCCACCAACTTGTGTGGGCTTTTGAAAAGGTTGCCAACAACTAATGTGGGATTT
* * ** * *
363072 TGAAAATGTTGTTACTAGCTCACATGCGCTT
66 TGAAAATGTTGTTACCAACTCATGTGGGATT
* * *
363103 TTGAAAAGGTTGCCACCAACTCT-CGTAGACTTTTGAAAAGGTT
1 TTGAAAAGGTTGCCACCAACT-TGTGTGGGCTTTTGAAAAGGTT
363146 ACCACGAAAT
Statistics
Matches: 259, Mismatches: 54, Indels: 28
0.76 0.16 0.08
Matches are distributed among these distances:
93 5 0.02
94 81 0.31
95 164 0.63
96 9 0.03
ACGTcount: A:0.28, C:0.17, G:0.23, T:0.32
Consensus pattern (96 bp):
TTGAAAAGGTTGCCACCAACTTGTGTGGGCTTTTGAAAAGGTTGCCAACAACTAATGTGGGATTT
TGAAAATGTTGTTACCAACTCATGTGGGATT
Found at i:363173 original size:8 final size:8
Alignment explanation
Indices: 363160--363184 Score: 50
Period size: 8 Copynumber: 3.1 Consensus size: 8
363150 CGAAATCTTA
363160 TGGGCTTT
1 TGGGCTTT
363168 TGGGCTTT
1 TGGGCTTT
363176 TGGGCTTT
1 TGGGCTTT
363184 T
1 T
363185 AAAAGGGTGC
Statistics
Matches: 17, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
8 17 1.00
ACGTcount: A:0.00, C:0.12, G:0.36, T:0.52
Consensus pattern (8 bp):
TGGGCTTT
Found at i:363488 original size:158 final size:158
Alignment explanation
Indices: 363209--363499 Score: 372
Period size: 158 Copynumber: 1.8 Consensus size: 158
363199 AACACATGTG
* * * **
363209 GACTTTGAAAAGGTTGCCATCAATGCGTGTGGACTTTAAATAAGGCTGCTACCAACTCGTGTGGG
1 GACTTTGAAAAGGTTGCCACCAATGAGTGTGGACTTTAAATAAGGCTGCTACCAACTCGTATAAG
* * * * * *
363274 CTTTTGAAATAGGTCCTATCAACTCATGTGGGCTTTTGAAAATGTTGCCACTAACTCGTGTGGAC
66 ATTTTGAAAAAGGTCCTACCAACTCATGTGGGCTTTTGAAAAGGTTACCACCAACTCGTGTGGAC
363339 TTTGACTATGGTGCCACCAACTTTTATA
131 TTTGACTATGGTGCCACCAACTTTTATA
* * *
363367 GACTTTGAAAAGGTTGCCACCAATTAGTGT-GACCTTCTGAA-AAGGTTGCTACCAACTCGTATA
1 GACTTTGAAAAGGTTGCCACCAATGAGTGTGGA-CTT-TAAATAAGGCTGCTACCAACTCGTATA
* * *
363430 AGATTTTGAAAAAGTTGCC-ACCAACTCGTGTGGGTTTTTGAAAAGGTTACCACCAACTCGTGTG
64 AGATTTTGAAAAAGGT-CCTACCAACTCATGTGGGCTTTTGAAAAGGTTACCACCAACTCGTGTG
*
363494 GGCTTT
128 GACTTT
363500 TTAAAAGGTT
Statistics
Matches: 112, Mismatches: 18, Indels: 6
0.82 0.13 0.04
Matches are distributed among these distances:
157 2 0.02
158 105 0.94
159 5 0.04
ACGTcount: A:0.26, C:0.20, G:0.23, T:0.31
Consensus pattern (158 bp):
GACTTTGAAAAGGTTGCCACCAATGAGTGTGGACTTTAAATAAGGCTGCTACCAACTCGTATAAG
ATTTTGAAAAAGGTCCTACCAACTCATGTGGGCTTTTGAAAAGGTTACCACCAACTCGTGTGGAC
TTTGACTATGGTGCCACCAACTTTTATA
Found at i:364149 original size:95 final size:94
Alignment explanation
Indices: 364034--396560 Score: 5490
Period size: 95 Copynumber: 340.5 Consensus size: 94
364024 CTCGTGTGAA
* * *
364034 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGTTTTTGTAAAA-GTTACCACCAACTCATGAGAGC
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTG-AAAAGGTTGCCACCAACTCATGTGAGC
*
364098 TTTTAAAAAGGTTGCTAACAACTTGTGTAGG
65 TTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * * **
364129 CTTTGAAAAGGTTGCCACCAACTCGTGTGGACTTTTGAAAATGTTGCCAACAACTTGTGTG-GAC
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-C
* *
364193 -TTTGAAAAGGTTG-TCACCAACTCGTGTGAG
65 TTTTGAAAAGGTTGCT-AACAACTTGTGTG-G
* * * * * *
364223 CTTTCAAAAAGGTTGCTACCAACTCATGTGGGATTTTGAAAGGGTTGCCACCAACT-TTGTGAGC
1 CTTT-GAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * * * *
364287 TTTTGAAAAGGTTGCCAATAACTTACT-CGA
65 TTTTGAAAAGGTTGCTAACAACTT-GTGTGG
* * * *
364317 CTTTGAAAAAGTTGTCACCAACTCGTTTGGGCTTTTGAAAAGGTTGCGACCAACTC-TCGT-AGA
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCAT-GTGAG-
* ** * * * ***
364380 CTTTTGAACATATTGCCACCAACTCGTGCAAA
64 CTTTTGAAAAGGTTGCTAACAACTTGTG-TGG
* * * ** * *
364412 CTTTGAAATGGTTACCTCCAACTTATGTGGGCTTTTGGACCTTTGAAAAGGTTGCCACCATCTCG
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGC---T-----TTTGAAAAGGTTGCCACCAACTCA
* * * *
364477 TGTGTGC-TTTGAAAAGATTGAC-ATCAACTCGTGTGGG
58 TGTGAGCTTTTGAAAAGGTTG-CTAACAACTTGTGT-GG
** * * ** ** * *
364514 CTTAAAAAAAAGCTGCGTCCAACTCGTGTCTGCTTTTGAAAAGGTTGCTACCAACTCATGTGGGC
1 CTT-TGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * ***
364579 TTTGGAAAATGTTGCCGCCAACTTGTGTGG
65 TTTTGAAAAGGTTGCTAACAACTTGTGTGG
**** * ** * * *
364609 ACTTTGACTTTGTTGCCACCAACTCGTGTGGAC-TTTG-ACCGTGGTGCCGCCAACT--TGTATA
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAG-GTTGCCACCAACTCATGT-GA
* * * * *
364670 GAC-TTTAAAAAGGTTACCAGCAACTCGTGTCGG
63 G-CTTTTGAAAAGGTTGCTAACAACTTGTGT-GG
** * ** * * ** *
364703 CTTTTGAAAATATT-ACACCCAACTCGTGT-GGAATTTGACTATGG-TGCCATAAACTCGTGTGA
1 C-TTTGAAAAGGTTGCCA-CCAACTCGTGTGGGCTTTTGA-AAAGGTTGCCACCAACTCATGTGA
* * *
364765 AC-TTTGTAAAGGTTGCCAACAACTCT-TGTGGG
63 GCTTTTGAAAAGGTTGCTAACAACT-TGTGT-GG
* * * * ** * *
364797 CTTTTGAAAAAGTTGCCAACAACGT-GTTTAGGC-TTTGAAAATCTTGTCACCAACTCGTGTG-G
1 C-TTTGAAAAGGTTGCCACCAAC-TCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG
* * * * *
364859 ACTTTTGCAAAGGGTGCCACCAACTCGTGTGG
64 -CTTTTGAAAAGGTTGCTAACAACTTGTGTGG
** * * * ** *
364891 CCCCTTT-AAAAGGGTCACCACCAACTCGTGTGGGCCTTAGAAATGGTTGTTACCAACTCGTGTG
1 ---CTTTGAAAA-GGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTG
* * * *
364955 GGATTTTGAAAAGGTAT--TACCAACTTGAGTGGG
62 AGCTTTTGAAAAGGT-TGCTAACAACTTGTGT-GG
* * ** * * * ** *
364988 ATTTTAAAAGGGTTGCCACCAACTCAAGTAGGCTTTTGAAAAGGTTACCAACAACTTGTGTG-GA
1 CTTTGAAAA-GGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * **
365052 TTTTGAAAACGTTG-TCACCAACCCGTGTGGG
65 TTTTGAAAAGGTTGCT-AACAACTTGTGT-GG
* * * * * * *
365083 CTTTTGAAAAAGTTTCCAACAACTTGTGTGGAC-TTTGAAAAGGTT-CTCACCAACAC-TGTGGG
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGC-CACCAACTCATGTGAG
* * * * *
365145 TTTTTGAAAAGATTGCTACCAACTCATGTATGA
64 CTTTTGAAAAGGTTGCTAACAACT--TGTGTGG
* * * * * * * * *
365178 TTTTGAAAAGGTTACCACCAAATCCTGGGGGCTTTTGAAAAGATTGCTAGCAACTTATGTTGA-C
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATG-TGAGC
* ** *
365242 -TTTGAAAAGGTT-TTTTCTAACTTGCGTGGG
65 TTTTGAAAAGGTTGCTAAC-AACTTGTGT-GG
* * * * *** * *
365272 CTTTTGAAAATGTTGCCACCAACACGTATGGAC-TTTGAAAAGGTCATCATCAA-TGCATGTGGG
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACT-CATGTGAG
* ** * * *
365335 C-TTTAAATAAGACTGCTACCAACTCGTATGGG
64 CTTTTGAA-AAGGTTGCTAACAACTTGTGT-GG
* * * * *
365367 CTTTTGAAATGGTT-CTCATCAACTCATGTGGGCTTTTGAAAATGTTGCCACTAACTCATGTG-G
1 C-TTTGAAAAGGTTGC-CACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG
* * * * * * *
365430 AC-TTTGACTATGG-TGCCACCAACTTTTATAGA
64 -CTTTTGA-AAAGGTTGCTAACAACTTGTGT-GG
** * * * * *
365462 CTTTGAAAAGGTTGCCACCAACTAATGCGAGCTTCTGAAAATGTT---A--GACT--T-TGA-C-
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGCT
* *** * * * ***
365517 TATG----GTGCCACAAAC-TCGTGTGAAC
66 TTTGAAAAG-GTTGCTAACAACTTGTGTGG
* ** * * ** ** * * ** * * *
365542 TTTGAAAAGGTTACCACCAACTC-A-T-GTG-GGCTTTTAT-AAAGGTTGCCAC-CAACTCGT-G
1 CTTTGAAAAGGT--TGCC-AC-CAACTCGTGTGGGCTTT-TGAAAAGGTTGC-CACCA-AC-TCA
** ** * * ** * *
365600 TG-GATTTTTGAAAATGTTACCACCAAC-TCGTT-TG-GG
58 TGTGAGCTTTTGAAAAGGT--TGCTAACAAC-TTGTGTGG
* * * * * * *
365636 CCTTTGAAAAAGTTGCTACCAACTCGAGTAGGATTTT-AAAAGGTTGCCACCAACTCAGGTGCGC
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* *
365700 TTTTGAAAAGGTTGCCAACAACTAT-TGTAGAA
65 TTTTGAAAAGGTTGCTAACAACT-TGTGT-G-G
* * * * * * * *
365732 TTTTAAAAAGGTTGTCACTAACTCGTGTGGAC-TTTGAAATGGTTGCCACCAATTCGTGTGAGCT
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGT--G--
* * *
365796 TTTAGGCTTTTGAAAAGGTTGCCACCAACTCT-TGTAGA
62 ---A-GCTTTTGAAAAGGTTGCTAACAACT-TGTGT-GG
* * * * * *
365834 CTTTTG-AAAGGTTGGCATCAACTCTTATGGAC-TTTGAAATA-GTTACCACCAACTCATGTAGA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAA-AGGTTGCCACCAACTCATGT-GA
* *
365896 G-TTTTGAAAAGGTTGCTACCAACTCGTGTGGGG
63 GCTTTTGAAAAGGTTGCTAACAACT--TGTGTGG
* * * * * * * *
365929 TTTTGAAAAAGTTACCACCAACTCGTGTGGACTTTTTAAAAGGTTTCTAACAACTCGCATG-G-G
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACT--CATGTGAG
*
365992 C-TTTGAAAAGGTTGCTAGCAACTTGTGTGG
64 CTTTTGAAAAGGTTGCTAACAACTTGTGTGG
* * * * * * * * *
366022 ACTTTTGAATAGGTTACCACAAACTCGTGTAGGCCTTTGAAAAGGTTGCTACCAACACGTGTGGG
1 -C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG
* * * *** ** *
366087 ATTTTCAAAAGGTTACCCCCAACTCATGCCGG
64 CTTTTGAAAAGGTTGCTAACAACTTGTG-TGG
* * ** * * * *
366119 ATTTTGAAAAAGTTATCACCAACTCGTGT-GGCTTTTCAAAAGGTTGCCACCAACTCGTGTGGGT
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * * *
366183 TTTTGTAAAA-GTTACCATCAACTCGTGTGAG
65 TTTTG-AAAAGGTTGCTAACAACTTGTGTG-G
* * * * * *
366214 CTTTTAAAAATGTTGCTAACAACTCGTGTAGGC-TTTGAAAAGGTTACCACCAACTCATGTG-GA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* * *
366277 CTTTTGAAAATGTTGCCAACAACTTGTGTGCA
64 CTTTTGAAAAGGTTGCTAACAACTTGTGTG-G
* * * ** ** * * *
366309 CTTTGAAATGGTTGTCACCAACTAGTGTTAGCTTTTGAAAAGGTTGCTGCCAACTTATG-CAGGA
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGA-GC
* *
366373 TTTTGAAAAGGTTG-TCATCAATTTGTGTGAG
65 TTTTGAAAAGGTTGCT-AACAACTTGTGTG-G
* ** * * * * * *
366404 CTTTTGAAAAGGTTGCCAACAACTTATGTAGAC-TTTGAAAAAGTTGTCACCAACTCGTGTGGGC
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * * *
366468 TTTTGAAAAGGTTACGACCAACTCTCGTAG-AG
65 TTTTGAAAAGGTTGCTAACAACT-T-GT-GTGG
* * * **** * * * **
366500 TTTTGAAAATGTTGCCACCAACTCATGCAAAC-TCTGAAATGGTTGCCTCCAACTTGTGTGGGCT
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGT--G--
* * * ** ** *
366564 TTTGGACTTTTGAAAAGGTTGCCACCTTCTCATGTAGA
62 ---AG-CTTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * * * ** * * * *
366602 CTTTGAAAAAGTTGACATCAACTCATGTGGGCTTTAAAAAAAGCTGCGACCAACTCGTGCCT-A-
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATG--TGAG
* * *
366665 CTTTTGAAAAGTTTGCTACCAACTCAAGTG-GG
64 CTTTTGAAAAGGTTGCTAACAACT--TGTGTGG
* ** * * * * * ** *
366697 CTTTGGAAAATGTTATCGCCAACTCATGTGGACTTTTTAAAAGGTTGCCAACAACTCGCGTGGGC
1 CTTT-GAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * * *
366762 -TTTGAAAAGGTTGCCACCAACTCGTATGG
65 TTTTGAAAAGGTTGCTAACAACTTGTGTGG
* * * * * * * * *
366791 ACTTTTGAAAAGGTTACCACAAACTCGTGTAGGCCTTCGAAAATGTAGCTACCAACACATGTGAG
1 -C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG
* * * * *
366856 ATTTTGAAAAGGTTGCCACCAACTCGTGCGAG
64 CTTTTGAAAAGGTTGCTAACAACTTGTGTG-G
* * * * * * **
366888 ATTTTAATAAAGTTGTCACCATCTCTTGTGGGCTTTTGAAAAGGTTGCCAATAACT--TGTGCAG
1 CTTTGAA-AAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTG-AG
* *
366951 AC-TTTGAAAAGGTTGTTACCAAC--GTG-GG
64 -CTTTTGAAAAGGTTGCTAACAACTTGTGTGG
* * * * * **
366979 CTTTTGAAAAGGTTACCACCAACTCTTGTAGACTTTTTAAAAGGTTGCCACCAACTCGCGTG-GA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
** ** * *
367043 C-AAT-AAAATTTTTGCCACCAATTCTTGTGACCTTTTGGG
64 CTTTTGAAAA-GGTTGCTAACAA--CTTGTG------T-GG
* * * * ** * *
367082 CTTTTAAAATAGTTACCACCAACTCTTGTGGAATTTTG-AAAGGTTGCCATCAACTCGTGTG-GA
1 CTTTGAAAA-GGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* * *
367145 C-TTTGAAATA-GTTCCCAATAACTTGTGTGG
64 CTTTTGAAA-AGGTTGCTAACAACTTGTGTGG
* ** * * *
367175 ATTTTTGAAAAGGTTGCCACCAACTTATGTGGGC-TTTGACTATGG-TGCCACAAACTCATGTGA
1 --CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGA-AAAGGTTGCCACCAACTCATGTGA
* * * ***
367238 AC-ATTGTAAAGGTTGCCCCCAACTCCTGTG-GG
63 GCTTTTGAAAAGGTTGCTAACAACT--TGTGTGG
* * * * * ** * * *
367270 CTCTTGAAAAGATTGCCAACGACTCGTTTGGGC-TTTGAAAATGTTATCACAAATTCATATG-GA
1 CT-TTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* * * *
367333 CTTTTGCAAAGGTTGCCACCAACTCT-TATGGG
64 CTTTTGAAAAGGTTGCTAACAACT-TGTGT-GG
* * * * * * * ** * * * * *
367365 TTTTAAAAAGGTTACTACTAAGTCATGAAGGCCTTTGAAAAGCTTGCTACCAACTCGTGTTG-GA
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATG-TGAGC
* * * ** * * *
367429 TTTTGGAACGGTTGCCATGAGCTGGAGTGAG
65 TTTTGAAAAGGTTGCTAACAACTTGTGTG-G
* * * * *** * *
367460 ATTTTGAAAAAGTTACCACCAACTCGGGTCACCTTTTGAAAAGGTTGCTACCAACT--TGTGCGG
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTG-AG
* *
367523 AC-TTTGAAAAGGTTG-TCACCAA-TACGTGTGTG
64 -CTTTTGAAAAGGTTGCT-AACAACT-TGTGTG-G
* * *** ** * * * * *
367555 TTTTAGAAAAAGTTTTTAATAACTTGTGTGGAC-TTTGAAAAAGTTGTCACCAACTTTATG-G-G
1 CTTT-GAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAAC-TCATGTGAG
* * *
367617 TTTTTGAAAAGGTTGCTACCAACTCGTGTGCG
64 CTTTTGAAAAGGTTGCTAACAACTTGTGTG-G
* * ** * * *
367649 ATTTTGAAAAAGTTAACACCAACTCGTGTGGGCTTTTAAAAAGGTTGCCACTAACTCGTGTG-GA
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* * * * * * *
367713 TTTTTTAAAATGTTACCACCAACTCGTGTGGG
64 CTTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * * * * * * * *
367745 CCTTTGAAAAGGTTGCTACCAACTTGTATAGGATTTTTAAAAAGTTGCCACTAACTCGTGTG-GC
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * **
367809 ATTTTGAAAAGGTTAC-GACTAACTCATGTAGG
65 -TTTTGAAAAGGTTGCTAAC-AACTTGTGT-GG
* * * * * * * ** *
367841 CTTTTAAAAGGTTGCCAACAACTTGTGTAGAC-TTTGAAAAGGTTGTCACTAACTCGGGTGGGCT
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGCT
** * *
367905 TTTGAAAAGGTTGCTGCCAA-TTATTGTAGAA
66 TTTGAAAAGGTTGCTAACAACTT-GTGT-G-G
* * * * * * * * * * *
367936 TTTTAAAAAGGTTACTACTAACTTGTATGGTC-TTTGAAATGGTTGCCACCAATTCTTGTGGGCT
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGT--G--
* * * *
368000 TCTAGGCTTTTGAAAAGGATGCCACCAACTCT-TATGG
62 ---A-GCTTTTGAAAAGGTTGCTAACAACT-TGTGTGG
** * * * **
368037 ACATTTG-AAAGGTTGCCATTAACTCCTATGGAC-TTTGAAATTGTTGCCACCAACTCATGTAGA
1 -C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGT-GA
* * *
368100 G-TTTTGAAAATGTTGCTACCAACTCGTGTGGGG
63 GCTTTTGAAAAGGTTGCTAACAACT--TGTGTGG
* * * ** * ** *
368133 TTTTGAAAATGTTGTCACCAACTCGTGTGGAAATTTT-AAAAGGTTGCCAACAACTCGCGTGGGC
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGG-GCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * * *
368197 -TTTAAAAAGGTTGCCACCAACTCGTGTGG
65 TTTTGAAAAGGTTGCTAACAACTTGTGTGG
* * * * * * *
368226 ACTTTTGAAAAGGTTACCACCAACTCGTGTAGG-TCATTGAAAAGGTTGCTACCAACACGTGTGG
1 -C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCT-TTTGAAAAGGTTGCCACCAACTCATGTGA
* * *** *
368290 GATTTTGAAAAGGTTACCCCCAACTCGTGTGAG
63 GCTTTTGAAAAGGTTGCTAACAACTTGTGTG-G
* * * * * * *
368323 ATTTTGAAAAAGTTGTCACCAACTCGTGTGAGCTTTTTAAAAGGTTGCCAACAACT--TTTGCAG
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTG-AG
* * *
368386 AC-TTT-AAAATGGTTGTTACCAACTCGTGT-G
64 -CTTTTGAAAA-GGTTGCTAACAACTTGTGTGG
* * * * * * *
368416 CATTTTTGAAAAGGTTACCACCAACTCTTGTAGACTTTTCAAAAGATTGCCACCAACTCGTGTG-
1 C---TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGA
* * * * * *
368480 GAC-ATTAAAATAGTTAATTCTAAC-TCTTATG-GG
63 G-CTTTTGAAA-AGGT--TGCTAACAACTTGTGTGG
* * * * *
368513 CTTTTGAAAAGGTTG-CACCAACTCTTGTAGACTTTTG-AAAGGTTGCCATCAACTCGTGTG-GA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* *
368575 C-TTT-AAAATGGTTGCCACCAACTTGTGTGGG
64 CTTTTGAAAA-GGTTGCTAACAACTTGTGT-GG
* * * * * * * * * *
368606 CTTTTGAAAAGGTTACCACCAACACTTGTAGGCTTTTGAAAAAGTTACTACCAACTGATGTAAAC
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * * * * *
368671 -TCTGACTATGG-TGC-CACAAACTCGTGTGAA
65 TTTTGA-AAAGGTTGCTAAC-AACTTGTGTG-G
* * * * * * * * * *
368701 CTTTGTAAAGGTTACCACTAACTCTTGTGGGTTTTTAAAAAGGTTACCACCAATTCGTGTTG-GT
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATG-TGAGC
*
368765 TTTTGTAAAA-GTTGCT-ACGAACTCGTGTGAG
65 TTTTG-AAAAGGTTGCTAAC-AACTTGTGTG-G
* * * * * *
368796 CTTTTAAAAAGGTTGCCAACAACTCGTGTAGGC-TTTGAAAAGGTTACCACTAACTCGTGTG-GA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
** * *
368859 CTTTCAAAAATGTTGCCAACAACTTGTGTGG
64 CTTTTGAAAAGGTTGCTAACAACTTGTGTGG
* * * * * * *
368890 ACTTTGAAAAGGTTGTCACCAACTCGTGTGAGCTTTTGAAAAGGTTGCTACTAACTCATGCGGGA
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* *
368955 TTTTGAAAAGGTTGCCACCAACTTGTGTGAG
65 TTTTGAAAAGGTTGCTAACAACTTGTGTG-G
** ** * * *
368986 CTTTTGAAAAGGTTGCCAATAACTTATGTGGAC-TTTGAAAAGGTTGTCACCAACTCATGTGGGC
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * * * *
369050 TTTTGAAAATGTTGCGACCAACTCTCGT-AGA
65 TTTTGAAAAGGTTGCTAACAACT-T-GTGTGG
* * * * * *
369081 CTTTTTAAAAGGTTGCCACCAACTCATGTGGGCTTTTGGCTTTTGAAAA-GTTGCTATCGACTCC
1 C-TTTGAAAAGGTTGCCACCAACTC--GT--G---TGGGCTTTTGAAAAGGTTGCCACCAACTCA
** * * * * *
369145 TGTG-GAC-TTTGAAATTGTTACCACCAACTCGTGAGGG
58 TGTGAG-CTTTTGAAAAGGTTGCTAACAACTTGTG-TGG
* * * * * * ** *
369182 CCTTTAAAAAGGTTACCACCAACTCATGTGAGCTTTTGAAAATGTTGCTATTAACTCGTGTG-GA
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* * * *
369246 C-ATTGGAAAGGTTGGCACCAACAAGTT-TG-GG
64 CTTTTGAAAAGGTT-G--CTAACAACTTGTGTGG
* * * * * ** * ** * * *
369277 TTTTTTAAAAGATTTCCACCAACTCATGTGAAC-TTTGAAAAGGTTACCAATAACTCGTATGGGC
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* *
369341 -TTTGAAAAGGTTGC--CCTAACTTATGTAGG
65 TTTTGAAAAGGTTGCTAAC-AACTTGTGT-GG
* * * * * * * *
369370 CTTTGAAAAGGATGTCC-CTAAGTCGTGTGGAC-TTTGAAAAGGTTGCCGCTAACTCGTGTGGGC
1 CTTTGAAAAGGTTG-CCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
** * * *
369433 TTTCAAAAAGGCTG-TCACCAACTTATGTGTGT
65 TTTTGAAAAGGTTGCT-AACAAC-T-TGTGTGG
* * * * ** * * * *
369465 TTTTTAAAAAGTCGCCATAAACTCGTGTGGGCTTTTGAAAATGTTGCCAACGACTCATGTGGGC-
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGCT
* * * *
369529 TTTGAAAAGGTTACCACCAACTCGTGTGG
66 TTTGAAAAGGTTGCTAACAACTTGTGTGG
* * * * * * * ** *
369558 ACTTTTGAAAAGGTTACCCCCAACTTGTGTGAGCTTTTGAACTA-GTTGCTACTAACTTGTGTGG
1 -C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAA-AAGGTTGCCACCAACTCATGTGA
* * *
369622 GATTTTGAAAAGGTTGCCT-CCAACTTATGTGAG
63 GCTTTTGAAAAGGTTG-CTAACAACTTGTGTG-G
* * * * **
369655 ATTTTGAAAAGGTTGCCACCAACTCTTGTAGACTTTTGAAAAGGTTGCCACCAACTCGCGTG-GA
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
** *** *
369719 C-TTT-AAAATTTTTGCCCCCAATTTGTGTGACCTTTTGGG
64 CTTTTGAAAA-GGTTGCTAACAA-CT-TGTG------T-GG
* * ** * * * * *
369758 CTTTTAAAATGGTTGTCACCAACTTTTGTGGACTTTTG-AGAGGTTGCCACTAACTCGTGTGAAC
1 CTTTGAAAA-GGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * * *
369822 -TTTGAAATA-GTTACCAATAACTCGTGTGG
65 TTTTGAAA-AGGTTGCTAACAACTTGTGTGG
* * * * ** * * *
369851 ATTTTTGAAAAGGTTGCCACCAACTCATATGGAC-TTTGACTA-TTGTGCCA-CAA--CGTGCGA
1 --CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGT-TGCCACCAACTCATGTGA
* * * * ** *
369911 AC-TTTGTAAAA-GTTGCCACCATCTCCTATGAG
63 GCTTTTG-AAAAGGTTGCTAACAACTTGTGTG-G
* * * * * * *
369943 CTTTTGAAAAGGTTGACAACAACTCGTTTCGGC-ATTGAAAATGTTACCACCAACTCGCATG-GA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACT--CATGTGA
* * * *
370006 -CTTTT-ACAATGCTTGCCT-CCAACTCGTGTGGG
63 GCTTTTGA-AAAGGTTG-CTAACAACTTGTGT-GG
* * * * * * *** * * * *
370038 CTTTTAAAAAAGTTACTACCAACTCGGGTGGGCCTTTGAAAAGGTTATTACGAACTCGTGTGGGA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* **
370103 TTTTGAAAAGGTTACCCCTAACTCCTATG-G-GG
65 TTTTGAAAAGGTT---GCTAACAACT-TGTGTGG
* * * * ** * *
370135 TTTTGAAAAGGTTGCCACTAACTCGTGTAGAC-TTTGAAAAGGTTGTAACCAACTCGTGTGGGCT
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGCT
* * * *
370199 TTTGAAAAAGTTTCCAACAACTTGTGTTGA
66 TTTGAAAAGGTTGCTAACAACTTGTG-TGG
** * * * * ** * * *
370229 CTTTGAAAAAATTTGTCACCAACTC-TATGGGTTTTTGAAAAGGTTGCTA-CAACTTGTTTGCGA
1 CTTTG-AAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* *
370292 TTTTGAAAAGGTTGC-CACTAACTCGTGTGCG
65 TTTTGAAAAGGTTGCTAAC-AACTTGTGTG-G
* * * * * * * * * * *
370323 CTTTTGAAAAGGTTACCAACAACTTGTGTTGAC-TTTCAAAAGGTGGTCACTAACTCTTGTGGGC
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * * *
370387 TTTTGAAAAGCTTGCCACCAACTCT-TGTAGA
65 TTTTGAAAAGGTTGCTAACAACT-TGTGT-GG
* *
370418 CTTTTGAAAAGGTTACCACCAACTCTTGTGGGCCTTTCGGCTTTTGAAAAGGTTGCCACCAACTC
1 C-TTTGAAAAGGTTGCCACCAACTC--GT--G----TGGGCTTTTGAAAAGGTTGCCACCAACTC
* * * *
370483 GTGTGCA-C-ATTGAAAAGGTTGCCATCAACTTGTGTGAG
57 ATGTG-AGCTTTTGAAAAGGTTGCTAACAACTTGTGTG-G
* * * ** *** * *
370521 TTTTAAAAATGGCTAACACCAACTCGTGTGGGCTTTTGAAAAGGTTGCTTTCAACTTATAT-AGG
1 CTTTGAAAA-GGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGA-G
* * * *
370585 CTTTTGAAAATGTTGCCAGCAACTTGTTTGG
64 CTTTTGAAAAGGTTGCTAACAACTTGTGTGG
* * * * ** * * * * * *
370616 ACTTTGACTATGG-TGCTACCAATTTTTATAGAC-TTGGAAAAGGTTACCACCAACTCGTGTGAG
1 -CTTTGA-AAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG
* * *
370679 CTTTTAAAAATGTTGGACTTTGACTATGATACAAACTCGTGTGAA
64 CTTTTGAAAA----GG---TTG-C--T-A-AC-AACTTGTGTG-G
* * * * * **
370724 CTTTGAAAAGGTTGCCACCAACTCATGCGAGCTTTTAAAAAGTTTGCCA-CAGACTCGGGTTGA-
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCA-ACTCATG-TGAG
* * * * *
370787 TTTTTAAAAAGGTTACCACCAACTCATGTG-GG
64 CTTTTGAAAAGGTTGCTAACAACT--TGTGTGG
* * * * * * *
370819 CCTTTGAAAAGGTTTCTACCAACTCGTGTGGGATTTTGAAAAAGGTTACCACAAACTCGTGTGGG
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTG-AAAAGGTTGCCACCAACTCATGTGAG
* * * **
370884 ATTTTGAAAAGTTTGC-CACAAACTCATGTGG
64 CTTTTGAAAAGGTTGCTAAC-AACTTGTGTGG
* * * * * * * * * *
370915 ACTTTTGAAAAGGTTTCCAACAACTGGTGTGGAC-TTCGAAAAAGTTGTCACTAACTCGTAT-AG
1 -C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGA-
** * * ***
370978 GCTTTTGAAACTGTTGCCACCAACTCTCGT-AAA
63 GCTTTTGAAAAGGTTGCTAACAACT-T-GTGTGG
* * * * * * **
371011 CTTTTGAAAAGGTTACCACCAACTCATGTGGACTTGTGAAAAGGTTGCCAACAATTGGTGT-AGA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* ** * *
371075 C-ATTGTAAAA-GTTGC-CGCTAACTCGTGTAAG
64 CTTTTG-AAAAGGTTGCTAAC-AACTTGTGT-GG
* * * * * *
371106 CTTTTGAAACGGTTGCCACTAACTCTTGTAGACTTTT-AAAAGGTTGCCACCAACT--TGTGTCG
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTG-AG
** * *
371168 GGTTTGAAATGGTTGCTAACAATTTGTGTGGACTTTTGGG
64 CTTTTGAAAAGGTTGCTAACAA-CT-TGT-G-----T-GG
* * * *
371208 CTTTTGAAAAGGTTGCCACCAACTCTTGTGGACTTTTG-AAAGCTTGCCATCAACTCATGTG-GA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* * **
371271 C-TTTGAAATA-GTTGCCACCAACTCGTGTGTAT
64 CTTTTGAAA-AGGTTGCTAACAACT--TGTGTGG
* * * * * * * ** * *
371303 TTTTGAAAAGGTTGCCACCTACTCCTATCGGCTTTTGAAAAGGTTACCAACAACTTGTTTGGGC-
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGCT
* * * * **
371367 TTTGAAAAAGTTACCACCAACTCATGTGG
66 TTTGAAAAGGTTGCTAACAACTTGTGTGG
* ** * * * * * *
371396 CCATTTGTAAACCTTACCACCAACTTGTATAGGCTTTTGAAAAGGTTGCTACCAACTCATGTGGG
1 -C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG
* * *** * *
371461 ATTTT-AAAAGTTTGCCGCCAACTCGTGTTGAA
64 CTTTTGAAAAGGTTGCTAACAACTTGTG-TG-G
* * *** * * * **
371493 TTTTGAAAAAGTTGCCACCAACTTAAGTGGGCTTTTGAAAAGATTACCAACAACTTGTGTG-GAC
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-C
* * *
371557 -TTTGAAAAGGCTGCTACCAACTCGTGTGGG
65 TTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * * * * * *
371587 CCTTTGAAAAGGTTGCCATCAACTCATGTGAGCTTTTGAGAATGTTGCCACCAACTCGTGCG-GA
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* * * * * ** *
371651 C-TTTCACTATA-G-TGCCACCAACTTTTAAAGA
64 CTTTTGA--AAAGGTTGCTAACAACTTGT-GTGG
* * *** * * * * *
371682 CTTTGAAAAGGCTGCCACCAACTGGTAAAGGCTTCTAAAAATGTTG-GACTTTAACTGTGGTGCC
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCAC--CAAC-----T---
* ** * *
371746 ACAAACTCGTGTGAACTTTGAAAAGGTTGC-CACAAACTCGTGTGGG
56 -C--A-T-GTGAG-CTTTTGAAAAGGTTGCTAAC-AACTTGTGT-GG
* * * * * * *
371792 CTTTAAAAAGGTTGCC-CTCAATTCGTGTGGGC-TTTGAAAGGGTTGCC-CTTAACTCTTTTGGG
1 CTTTGAAAAGGTTGCCAC-CAACTCGTGTGGGCTTTTGAAAAGGTTGCCAC-CAACTCATGTGAG
* * * *
371854 C-TTTGAAAATGTTGCCATCAACTCGTGTAGG
64 CTTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * * * * *
371885 ATTTTAAAAAGGCTGCCAACAACTCGTATGGGCTTTTGAAAAGGTTGCCACCAACTCATATG-GA
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* * * * * *
371949 C-TTTAAAAAAGTTGCCAACAAGTCGGGTGGG
64 CTTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * * *
371980 CTTTTGAAAAGGTTGCCACCAACTCGTGTAGACTTTTGAAAATGTTACCACCAACTCATGTG-GA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
** * * * *
372044 C-TTTGACTACGATGC-CACAAACTTGTGTGAA
64 CTTTTGAAAAGGTTGCTAAC-AACTTGTGTG-G
* * * * * * * *
372075 CCTTGAAAAGGTTACCACTAACTCATGTAGGCTTTTAAAAAGGTTCCCACCAACTC--GTGTGCA
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC-
* * *
372138 TTTTAAAAAAGTTG-TCACCAACTCATGTG-GG
65 TTTTGAAAAGGTTGCT-AACAACT--TGTGTGG
* * * ***
372169 CTTTTGAAAAGGTTGCCAACAACTCGTATGAGC-TTTGAAAAGGTTGCCACCAACTTGGGTG-GA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* * * * *
372232 CTTTTGAAAAGGTTACCACCAACTCGTTTGGG
64 CTTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * * ** ** ** *
372264 CCTTTCAAAAGGTTGCTACCAACTCATGCAGGCTTTTGAAAATATTGCCATAAACTCGTGT-AGG
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGA-G
* * *
372328 ATTTTGAAAAGGTTTCCGCCAAC-TCTTGTG-GG
64 CTTTTGAAAAGG-TT--GCTAACAACTTGTGTGG
* * * * * * * *
372360 CTTTTGAAAAGGTTGCCAACAACTTGTGTGGAC-TTTGAAAATGTTGCCACGAACTCGTGTGGGT
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* ***
372424 TTTTGAAAATGTTAGACT-TTGACTATG-GT-G
65 TTTTGAAAAGGTT-G-CTAACAACT-TGTGTGG
*** *** * * * *** * **** ***
372454 C-CACAAACTTTTG-TA--AACT-TTGAAAGGG-TTACCACTAACTCGTGTGTGCTTTGAAAAGA
1 CTTTGAAAAGGTTGCCACCAACTCGTG--TGGGCTTTTGA--AA--AG-GT-TGCCACCAACTCA
** * * * ** * * *****
372513 T-TGCCCCCAATTCGTATGGGCTG-TGAA-AAGGTT-ACCCC
58 TGTG--AGC-TTTTGAAAAGGTTGCT-AACAA-CTTGTGTGG
*** ** ** * * * *** ** **** *
372551 CAATTCATGTGGACTTTGAAAATGTTGCCATCAAC-TCGTGTGGGCTT-ATTGAAAAGGCTACCA
1 C--TT--TGAAAAGGTTG-CCA-----CCAAC-TCGT-GTGGGCTTTTGA-AAAGGTTGCCACCA
* * * * * ** *
372614 ACAACTCGTGTGGGCTTTCGAAAAGGTTGCCATCAACTCATATGG
53 A---CTCATGTGAGCTTTTGAAAAGGTTGCTAACAACTTGTGTGG
* * ** * * *
372659 ACTTTG-AAAGGTTGCCACCAATTCGTGTGGGCTTCTG-ATTGGCTGCCATCAACTCGTGT-AGA
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* * * * * *
372721 TTTTTAAAAAAGTTACCACCAACTCT-TGTGG
64 CTTTTGAAAAGGTTGCTAACAACT-TGTGTGG
* * * * ** * * * * * *
372752 ACTTTGACTATGG-TGCCACAAACTTGTGTGAAC-ATTGAAAAAGTTGTCGCCAAATCGTGTG-G
1 -CTTTGA-AAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG
* * *
372814 TCTTTTAAAAAGGTTGCCACCAACTCATGTG-GG
64 -CTTTTGAAAAGGTTGCTAACAACT--TGTGTGG
* * * * * * *
372847 TTATTGGAAAA-GTTGTCACCAACTCATGTGGGCTTTTAAAAAGGTTGCTAACAACTCGTGTG-G
1 CT-TT-GAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG
* * *
372910 C-TTTGAAATGGTT-ATCACCAACTCT-TGTGG
64 CTTTTGAAAAGGTTGCT-AACAACT-TGTGTGG
* * * * * *
372940 ACTTTCAAAAAGGTTACCACCAATTCGTGTGGGCCTTTGAAAAGGTTGCCATCAACTCGTGT-AG
1 -CTTT-GAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGA-
* * *
373004 GCTTTT-AAAAGTGCTACCAACAACTTGTGTGGG
63 GCTTTTGAAAAG-GTTGCTAACAACTTGTGT-GG
* * ** * * * * * *
373037 CTTTTGAAAAGGTTGACACCAGCTTATATGGAC-TTTAAAAAGGTTGCCACCAATTCGTGTGGGC
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * * * ** * *
373101 TTTTGAAATGGTTACCATCAACTCATATAGA
65 TTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * * * * ** * * * * * *
373132 CTTTTAAAAATGTTACCACCAACTCGTGTAGAC-TACGACTATGG-TGCTACAAACTCGTGTGAA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGA-AAAGGTTGCCACCAACTCATGTGAG
* * * *
373195 C-TTTAAAAAGGTTACCACCAACTCCTGTG-GG
64 CTTTTGAAAAGGTTGCTAACAACT--TGTGTGG
* * * * * * * * **
373226 CTTTTAAAAAGATTACCACCAACACATGTAGGTTTTTGTAAAA-GTTGCCACTAACTTGTGTGAG
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTG-AAAAGGTTGCCACCAACTCATGTGAG
* * *
373290 CTTTTAAAAAGGTTGCCAACAACTCGTGTAGG
64 CTTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * * * ** *
373322 CTTTGAAAAAGGTTGCCACCAACTCGTGTGGACTTTTGACAATGTTGCCACCAAGTCATGCAAAC
1 CTTTG-AAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* *
373387 -TTTGAAATGGTTGGCT-CCAACTTGTGTGGGTTTTTGG
65 TTTTGAAAAGGTT-GCTAACAAC-T-TGT--G----TGG
* * * ** * ** * * *
373424 ACTTTTGAAAAGGTTACCACTATCTCGTGTGAAC-TTTGAAAAGGTTGACATTAAGTCGTGTGGG
1 -C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG
** * * * * *
373488 CTTTAAAAAAAGTTGCGAGCAACTCGTGTCCG
64 CTTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * * *
373520 CTTTTGAAAAGGTTGCTACCAACTCATGTGGGCTTTTGAAAATGTTGCCACCAACTCGTGTG-GA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
**** * *
373584 C-TTTGACTTTGTTGCCACCAA-TCTGTGTGG
64 CTTTTGAAAAGGTTGCTAACAACT-TGTGTGG
* * ** * * * * *** * * * *
373614 ACTTTGACTATGG-TGCTGCCAACTTGTATAGAC-TACAAAAAGGTTACCAGCAACTCGTGTGGG
1 -CTTTGA-AAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG
** * *
373677 CTTTTGAAAATATT-ATACCCAA-TTCGTGTGG
64 CTTTTGAAAAGGTTGCTA-ACAACTT-GTGTGG
* * ** ** * * *
373708 ACTTTGACTATGG-TGCCATAAACTCGTGTGAAC-TTTGTAAAGGTTGCCTCCAACTTC-TGTGG
1 -CTTTGA-AAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAAC-TCATGTGA
* *
373770 GCTTTTGAAAAGGTTGCCAACAACTCATTTG-GG
63 GCTTTTGAAAAGGTTGCTAACAACT--TGTGTGG
** * * * *
373803 CTTTGAAAATCCTTG-CACCAACTTAG-GTAGACTTTTGTAAAAGG-TGCCACCAACTCGTGT-A
1 CTTTGAAAA-GGTTGCCACCAAC-TCGTGTGGGCTTTTG-AAAAGGTTGCCACCAACTCATGTGA
* * * *
373864 GGCTTTTGAAAAGATTAC-CACGAACTCATATG-GG
63 -GCTTTTGAAAAGGTTGCTAAC-AACT--TGTGTGG
* * * * ** * * * * *
373898 CCATCGAAAAAGATGTTACCAACTCATGTGGGATTTTGAAAAGGTAT--TACCAACTCAAGTGGG
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGT-TGCCACCAACTCATGTGAG
* * * * *
373961 ATTTT-AAAAGGGTTGCCACCAACTCGTATGGG
64 CTTTTGAAAA-GGTTGCTAACAACTTGTGT-GG
* * * * * * * *
373993 CTTTTGAAAAGGTTGCCAACAACTCATGT-GGATTTTGAAAAGTTTGTCACCAACCCATGTGGGA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * * * *
374057 TTCTGAAAAAGTTTCCAACAACTTGTGTGTA
65 TTTTGAAAAGGTTGCTAACAACTTGTGTG-G
* * * * * * * * *
374088 CTTTGAAAAGGTTGTCACCAACAC-TATGTGTTTTTGAAAAGATTGCTACCAACTCATGTGTGAT
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGCT
*
374152 TTTGAAAAGGTTG-TCACCAA-TTCGTGTGGG
66 TTTGAAAAGGTTGCT-AACAACTT-GTGT-GG
** * ** * * * *** * *
374182 CTTTTGAAAAGGTTGCCAATAATTTATGTTGAC-TTTGAAAAGTTTATTACTAACT--TGCGACA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTG--A
* * * * *
374244 GCTTTTAAAAAGGTTTGCCACCAACTCTCGT-AGA
63 GCTTTTGAAAAGG-TTGCTAACAACT-T-GTGTGG
* * * * *
374278 CTTTTGAAACGGTTGCCACTAACTCATGTGGGCTTTTGGGCTTTTAAAAAGGTTGTCACTAA--C
1 C-TTTGAAAAGGTTGCCACCAACTC--GT--G----TGGGCTTTTGAAAAGGTTGCCACCAACTC
* * * * * *
374341 ATGTGTGGATTTTGAAAAAGTTGCCATCAA-TGCGTGTGGG
57 ATGTG-AGCTTTTGAAAAGGTTGCTAACAACT-TGTGT-GG
* * * * * * *
374381 CTTT-AATTAAGGCTGCTACCAACTCGTGTGAGCTTTTGAAATGGTTCCCATCAA-TCATGTGGG
1 CTTTGAA--AAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG
* * * *
374444 CTTTTGAAAATGTTGC-CACTTACTCGTGTGG
64 CTTTTGAAAAGGTTGCTAAC-AACTTGTGTGG
* * ** * ***
374475 ACTTTGACTATGG-TGCCACCAACTTTTATAAAC-TTTGAAAAGGTTGCCACCAACT-A-GT--G
1 -CTTTGA-AAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG
* *
374534 ----TG--AA-CTT-CTGA-AAC-TGTTG-GG
64 CTTTTGAAAAGGTTGCTAACAACTTG-TGTGG
* * ** * * * *
374555 CTTTGAATATGG-TGCCACAAACTCGTGTGAAC-TTTAAAAAGGTTACCACCAACTCAAGTGGGC
1 CTTTGAA-AAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * * *
374618 TTTTAAAAAGGTTGCTACCAACTCGTATGG
65 TTTTGAAAAGGTTGCTAACAACTTGTGTGG
* * ** * * * * *
374648 ATTTTTCAAAATATTACCACCAACTTGCGTGGGCCTTTGAAAA-GTTGCTACCAACTCATGT-AG
1 --CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGA-
* * *** * * *
374711 GATTTTAAAAATACTGCCACCAACTCGTGTGGG
63 GCTTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* ** ** * ** * **
374744 ATTTTGAAAAGGTTATCACCAACTTTTATGGGCTTTTGAAAAGGTTGTTAACAACTTGTGTG-GA
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* * *
374808 C-TTTGAAAAGGTTG-TCACCAACTCGGGTGGG
64 CTTTTGAAAAGGTTGCT-AACAACTTGTGT-GG
* * * ** * ** * * * *
374839 CTTTTGAAAAGGTTACCACCGATTATTGTAGAATTTTAAAAAGGTTGCCACTAACTCGTCT-AGA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* *
374903 C-TTT-AAAATGATTGCT-ACTAATTTGTGTGGGCTTTTAGG
64 CTTTTGAAAA-GGTTGCTAAC-AA-CT-TGT--G----T-GG
* * * * * * * * *
374942 CTTTTGAAAAGGTTGTCACCAACTCTTGTGGACTTTTGAAAATGTTACCACCAACTTACGCGAGA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * * * *
375007 TTTTAAAAAAGTTG-TCACCAGCTCGTGTGG
65 TTTTGAAAAGGTTGCT-AACAACTTGTGTGG
* * * * * * * * *
375037 AATTTTTAAAAAGTTGCAAACAACTTGTGTGGACTTTTG-AAAGGTTACCACAAACTCATGT-AG
1 --CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGA-
* * * * **
375100 GCCTTTGAAAATGTTTCTACCAACACGTGTGGG
63 GCTTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * * *** * * * * * *
375133 ATTTTGAAAAGGTTACCACCAACTCTTGCAAGATTTTGAAAAAGTTGTCACCAACTCGTTTGGGC
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * * *
375198 TTTTGAAAAGATTGTTACCAACTCGTGTGGG
65 TTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * *** * * *
375229 CTTTTGAAAAGGTTACCACCAACTCTTACAGACTTTTCAAAAGGTTGCCACCAACTCGTGTG-GA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* **
375293 C-ATTGAAATA-GTTGCTTCCAACTCT-TGTGGG
64 CTTTTGAAA-AGGTTGCTAACAACT-TGTGT-GG
* * * **
375324 CTTTTGAAAAGGTTGCCACCAACTCTTGTAGACTTTTG-AAAGGTTGCC-CCTAACTGGTGTG-G
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACC-AACTCATGTGAG
* * * *
375386 AC-TTTGAAATGGTTGCCACCAACTCGTGTAGG
64 -CTTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * * * * * *
375418 CATTTAAAAAGGTTACCACCAACACGTATAGGCTTTTGAAAAGGTTACTACCAACTCATGT-A-C
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * * * *** *
375481 ACTTTGACTATGG-TGC-CACAAACCCATGTGAA
65 -TTTTGA-AAAGGTTGCTAAC-AACTTGTGTG-G
* * * * * * * ** * *
375513 CTTTGAAAAGGTTACCACCAACTCTTGTAGGTTTTTAAAAAGGTTACCACCAATTTGTGTGGGTT
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGCT
* * *
375578 TTTGTAAAA-GTTGCCAGCAACTCGTGTGAG
66 TTTG-AAAAGGTTGCTAACAACTTGTGTG-G
* * * ** * **
375608 CTTTTAAAAAGGTTACCACCAACTCGTGTGGACTTTTGAAAATATTGCCAACAACTGGTGTG-GA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* * * *
375672 C-TTTCAAAAGGATG-TCACCAACTTGTATGAG
64 CTTTTGAAAAGGTTGCT-AACAACTTGTGTG-G
* * * ** * * *
375703 CTTTTGAAAAGGTTGCTATCAACTCATGTGGAATTTTGAAAAGATTGTCACCAACT--TGGAAGA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCAT-G-TGA
* *
375766 GCTTTTGAAAAGGTTGCCAACAACTTATGTGG
63 GCTTTTGAAAAGGTTGCTAACAACTTGTGTGG
* * * ** * *
375798 ATTTTGAAAAGGTTGTCACTAACTCGTGTGGGCTTTTGAAAAGGTTGTGACCAGCTC-TCAT-AG
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCAT-GTGAG
* * ** *
375861 ACTTTTGAAAAGGTTGCCACCAACTCATGTGCA
64 -CTTTTGAAAAGGTTGCTAACAACTTGTGTG-G
* * * *** * * * *
375894 CTTTTAAAAAGGTTGCCAACAACTTGTGTTAAC-TTTGAAAAGGTTGTCACTAACTCGTGTGGGC
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * * ***
375958 TTTTGAAAAGGTTACCACCAACTCTCGT-AAA
65 TTTTGAAAAGGTTGCTAACAACT-T-GTGTGG
* * * *
375989 CTTTTAAAAAGGTTACCACCAACTCTAATGGGCCTTTCGGCTTTTGAAAAGGTTGCCACCAACTC
1 C-TTTGAAAAGGTTGCCACCAACTC------G--TGTGGGCTTTTGAAAAGGTTGCCACCAACTC
* * * * *
376054 GTGTGCA-C-ATTGAAAATGTTGCCATCAACTTGTGTGGG
57 ATGTG-AGCTTTTGAAAAGGTTGCTAACAACTTGTGT-GG
** * * **
376092 CTTTTGAAAAGGTTGCCTTCAACTCATGTGGGCTTTTGAAAATGTTGCCACCAACTTGTGTG-GA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* * * * * * * *
376156 C-TTTGACTATGG-TAC-CACAAATTTTTATAGA
64 CTTTTGA-AAAGGTTGCTAAC-AACTTGTGT-GG
** * * * *
376187 CTTTGAAAAGGTTGCCACCAACT-GTGTGAACTTCTAAAAATGTTAGACTTTGACTATGATACAA
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAA-G---G---TTG-C-----CACCA
* * * * * * * *
376251 ACTCGTGTAAAC-TTTGAAAAGGTTGCCACCAACTCAAGCGAGG
53 ACTCATGTGAGCTTTTGAAAAGGTTGCTAACAACT--TGTGTGG
* * * ** * ** * *
376294 -TTTTAAAAAGTTAGCCACCAACTCG-GATTGATTTTTAAAAAGGTTATCACCAACTTATGTGGG
1 CTTTGAAAAGGTT-GCCACCAACTCGTG-TGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG
** * *
376357 CTTTCAAAAAAGTTGCTACCAA-TTCGTGTGAG
64 CTTTTGAAAAGGTTGCTAACAACTT-GTGTG-G
* * * *
376389 ATTTTGAAAAGGTTACCACCAACTCGTGTGGGATTTTGAAAAGGTTGCCACCAACTCATATG-GA
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* * *
376453 CTTTTGAAAAAGTTGCCAACAACTAGTGTGG
64 CTTTTGAAAAGGTTGCTAACAACTTGTGTGG
* * * ** * * * *
376484 ACTTTGAAAAAGTTGTCACTAACTCGTGTAAGCTTTTGCAACGGTTGCCACCAATTCTTGT-AGA
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* * *
376548 CTTTTGAAAAGGTTGCCACCAACTCGTGTAGG
64 CTTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * * * * *
376580 GTTTGAAATGGTTGCCAACAATTCGTGTGGGCTTTTGGGCTTTTGAAAAGGTTGCCATCAACTCT
1 CTTTGAAAAGGTTGCCACCAACTC--GT--G----TGGGCTTTTGAAAAGGTTGCCACCAACTCA
* * * **
376645 TGTG-GACTTTTG-AAACGTTGCCATCAACTCATGTGG
58 TGTGAG-CTTTTGAAAAGGTTGCTAACAACTTGTGTGG
* * * ** * * ** *
376681 ACTTTGAAATA-GTTACAACCAACTTGTGTGGATTTTTAAAAAGGTTACCACCAACTTGTGTGAA
1 -CTTTGAAA-AGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG
* * * ** *
376745 TTTTTGAAAAGGTTGCCATCAACTCCTGTCGA
64 CTTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * * * * *
376777 CTTTTGAAAAGGTTACCAACAACTCGTTTGGGC-TTTGAAAAAGTTTCCACCAACTCATGCG-GC
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* *** * * * *
376840 CATTTGCAAACCATAGC-ACCAACTCGTATAGG
64 CTTTTG-AAAAGGTTGCTAACAACTTGTGT-GG
* * * * * * *
376872 CTTTTGAAAAGGTTGCTACTAACTCATGTGGGATTTTG-AAAGTTTGCCACAAACTCGTGTTGA-
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATG-TGAG
* * *
376935 ATTTTGAAAAGGTTGCCACCAACTCATGTG-GG
64 CTTTTGAAAAGGTTGCTAACAACT--TGTGTGG
* ** * * * *
376967 CTTTTGAAAAGGTTGCCAACAACTTTTGTGGAC-TTTGAAAAGGCTACTACCAACTCATGT-AGG
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGA-G
* * * * *
377030 CCTTTGAAAAGGTTGCCATCAACTCATGTGAGT
64 CTTTTGAAAAGGTTGCTAACAACT--TGTGTGG
* * * * ** * * ** *
377063 TTTTGAGAATGTTGCCACCAACTCGTGTGGAC-TTCCACTATGG-TGCCACCAACTTTTAT-AGA
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGA-AAAGGTTGCCACCAACTCATGTGAG-
* * * *
377125 C-TTTGAAAAGGTTGCCACCAACTTATGTAAG
64 CTTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * ** * * ** * *
377156 CTTCTGAAAATGCTAGACTTTAACTATGGTGCCACAAACTTGTGTGAACTTTGAAAAAGTTACCA
1 CTT-TGAAAA-G---G---TT-GCCA-----CCA-ACTCGTGTGGGCT-TTTGAAAAGGTTGCCA
* ** ** *** *
377221 CAAACTGGTGT-AGGATTTGAAAAGGTTGCCCCCAA-TTCGTGCGGG
50 CCAACTCATGTGAGCTTTTGAAAAGGTTGCTAACAACTT-GTG-TGG
* * * *
377266 CTTTGAAAAGGTTGCC-CTCAACTCATTTGGGC-TTTGAAAAGGTTACCATCAACT-A-GTGTAG
1 CTTTGAAAAGGTTGCCAC-CAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTG-AG
* * * *
377327 CATTTTAAAAAGGCTACCAACAACTTGTGTGGG
64 C-TTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * * * * * ** *
377360 CTTTTGAAAAGGTTGCCACCAATTCATATGGAC-TTTCAAAAGGTTGCCACTAACTCGGGTGGGC
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * * * * *
377424 TTTTAAAAAGGTTGCCACCAACTCGTATAGA
65 TTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * * * * * * * ** *
377455 CTTTTGAAAATGTTACCACCAACTCATGTGGAC-TTTGACTATGG-TGTCACAAACTTGTGTGAA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGA-AAAGGTTGCCACCAACTCATGTGAG
* ** *
377518 C-CTTGAAAAGGTTGCTGCCAACTCGTGTGGG
64 CTTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * * * *
377549 CTTTTAAAAAGGTTCCCA-CAACTCGTGTGGG-TTTTAAAAAGGTTGCCACCAACTCATATGGGC
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * * *
377612 TTTTGAAAAGATTGCCAACAACTCGCAG-GAG
65 TTTTGAAAAGGTTGCTAACAACTTG-TGTG-G
* * * * * *
377643 CTTTGAAAAGGTTGCCACCAACTCGTGTGGCCTTTTGAAAAGGATACCACCAACTCGTTTGGGCT
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGCT
* * ** *
377708 TTTGAAAAGGTTCCTACCAACTCATGCAGG
66 TTTGAAAAGGTTGCTAACAACTTGTG-TGG
* * * ** * * ** * * * *
377738 ATTTTG-AAA---TGCCATCAACTCATGTCAGATTTTGAAAAAGTTTTCTCCAACTCTTCTGGGC
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* *
377799 TTTT-ATAAATGTTGCCAACAACTTGTGTGG
65 TTTTGA-AAAGGTTGCTAACAACTTGTGTGG
* * * * * ****
377829 ACTTTGAAAAGGTTACCACCAACTCGTGTGAGCTTCTGAAAATGTTAGACTTTGACT-ATGGTGC
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTT-GCCACCAACTCAT-GTG-
* * * * ***** * *
377893 CATAAACTCATGTGAACTTTGAAAAGGTTGCCCCCAATT-TGTGTGGG
62 ----AGCT--TTTG-A-----AAAGGTTGCTAACAACTTGT--GT-GG
* * * *
377940 CTTTGAAAAGGTTGCC-CCTAACTCATGTGGAC-TTTGAAAAGGTTGCCATCAACTCATGTGGGC
1 CTTTGAAAAGGTTGCCACC-AACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * * * * ** * *
378003 TTTTAAAAAAGCTT-CCAATAGCACGTGCAGT
65 TTTT-GAAAAGGTTGCTAACAACTTGTG-TGG
* * * * * * * * *
378034 CTTTTGAAAAGGTTGCCATCAAGTCATATGGAC-TTTAAAAAGGTTGCCACCAATTCGTGTGGGC
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* *
378098 TTTTGAAATGGTTGC-AATCAACTTGTGTAGA
65 TTTTGAAAAGGTTGCTAA-CAACTTGTGT-GG
* * * * * * * * * ** * *
378129 CTTTTTAAAATGTTACCACTAACTCTTGTGGAC-TTTGACTATGG-TGCCACAAACTTGTGCGAA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGA-AAAGGTTGCCACCAACTCATGTGAG
* ** * *
378192 C-TTTGAAAAAGTTG-TCGCCAAATCGTGTGGG
64 CTTTTGAAAAGGTTGCT-AACAACTTGTGT-GG
* * * * *
378223 CTTTTAAAAAGGTTGCCACCAACTCTTGTGGG-TTGTTGAAAAAGTTGCCACCAACTCTTGTGGG
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTT-TTGAAAAGGTTGCCACCAACTCATGTGAG
** * ** **
378287 CTTTCAAAAAGGTTGCCAACAACTCATGCAG
64 CTTTTGAAAAGGTTGCTAACAACTTGTGTGG
** * * * * * * * * *
378318 CTTTGAAAAGGTTTTCACCGACTAGTGTGGACTTTTGAAAATGTTACCACCAACTCGTATGGGCC
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGCT
* *** *
378383 TTTGAAAAGATTGCCCCCAA-TTCATGTGG
66 TTTGAAAAGGTTGCTAACAACTT-GTGTGG
** * * * * * * ** *
378412 ACTTTGAAAAGGTTATCATCAACTCGTGTGGACTTTTAAAAAGGCTACCGA-CAATTTGTGTGGG
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCC-ACCAACTCATGTGAG
* * * ** * *
378476 CTTTTGAAAAGGTTACCACCAACTCATATGAA
64 CTTTTGAAAAGGTTGCTAACAACTTGTGTG-G
* * * * * * * * *
378508 CTTTAAAAAGGTTGCCACTAATTCTTGTGGGCTTTTGAAATGGTTGCCATCAACTCCTGTCAACT
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGCT
* * * * *
378573 TTTAAAAACGTTAC-CACTAACTTGTGTAGA
66 TTTGAAAAGGTTGCTAAC-AACTTGTGT-GG
* * * * ** * * *
378603 CTTTGATTATGG-TACCACAAACTCGTGTGAAC-TTTGAAAAGGTTACCACTAACTCGA-GTGGG
1 CTTTGA-AAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTC-ATGTGAG
* * * *
378665 CTTTTAAAAAGGTT-ATCACCAACTCGTGTGGG
64 CTTTTGAAAAGGTTGCT-AACAACTTGTGT-GG
* * * * * **
378697 TTTTTGTAAAA-GTTGCCAACAACTTGTGTGAGCTTTT-AAAATGGTTGCCAACAACTTGTGTG-
1 -CTTTG-AAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAA-GGTTGCCACCAACTCATGTGA
* * *
378759 GAC-TTTGAAAAGGTTGCCACCAACTCGTGTGG
63 G-CTTTTGAAAAGGTTGCTAACAACTTGTGTGG
** * * *
378791 ACTTTTGAAAATATTGCCAACAACTTGTGTGGAC-TTTGAAATA-GTTGCCACCAACTCATGTAG
1 -C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAA-AGGTTGCCACCAACTCATGT-G
* ** *
378854 AG-TTTTGAAAAGGTTGCTACCAACTCATATGG
62 AGCTTTTGAAAAGGTTGCTAACAACTTGTGTGG
* * * * * ** *
378886 ATTTTTGAAAAGGTTGCCACCAACTCGTGTGGACTTTTTATAAGGTTGCCAACAACTCGCGTGGG
1 --CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG
* * *
378951 C-TTTGAAAAGGTTGCCACCAACTTGTGTGAA
64 CTTTTGAAAAGGTTGCTAACAACTTGTGTG-G
* ** * * * * * * *
378982 CTATTGAAAAAGTTATCACAAACTCATATAGGCCTTTGAAAAGGTTGCTACCAACATGTATGTGA
1 CT-TTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAAC-T-CATGTGA
* * * ** *
379047 --TTTTGAAAAGGTTACCACCAACTAATGCGAG
63 GCTTTTGAAAAGGTTGCTAACAACTTGTGTG-G
* * ** *
379078 ATATTGAAAAAGTTATCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCAACAACT--TGTGTAG
1 CT-TTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTG-AG
* * *
379141 AC-TTTGAAAAGGTTGTTACCAACTCGTGTGG
64 -CTTTTGAAAAGGTTGCTAACAACTTGTGTGG
* * * * * * * *
379172 ACTTTTGTAAAGGTTACTACCAACTCTTGTAGACTTTTCAAAAGGTTACCACCAACTCATGTG-G
1 -C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG
* * ** ** *
379236 ATATTGAAATA-GTAACTTCCAACTCTTATGGGCTTTTGGG
64 CTTTTGAAA-AGGTTGCTAACAA--C-T-T--G--TGT-GG
* * * * *
379276 CTTTTGAAAAGGCTGCCACCAACTCTTGTAGACTTTTG-AAAGGTTGCCATCAACTCATGTG-GA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* * * *
379339 C-TTTCAAATGGTTGCCACCAACTCATGTG-GG
64 CTTTTGAAAAGGTTGCTAACAACT--TGTGTGG
* * * * * * * * * *
379370 CTTTTGAAAAAGTTACCACCAGCACGTGTAGGTTTTTGAAAAAGTTACTACCAACTC-TAT-AGA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* * * * *
379433 C-TTTGACTATGG-TGCT-GCAAACTCGTGTGAA
64 CTTTTGA-AAAGGTTGCTAAC-AACTTGTGTG-G
* * ** * * * *
379464 CTTTGAAAAGATTACCAATAACTCCTATGGGCTTTT-ACAAAGGTTACCACCAACTCATTTGA-C
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGA-AAAGGTTGCCACCAACTCATGTGAGC
* * * *
379527 TTTTTGTAAAA-GTTACCACCAACTCGTGTGGG
65 -TTTTG-AAAAGGTTGCTAACAACTTGTGT-GG
* * * ** *
379559 CTTTTAAAAAGGTTGCCAACAACTCATGCAGGC-TTTGCAAAGGTTGCCACCAACTCATGTG-GA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* *
379622 CTTTTGAAAATGTTGCCAACAACTTGTGTGG
64 CTTTTGAAAAGGTTGCTAACAACTTGTGTGG
* * * * ** *
379653 ACTTTGAAAAGGTTGTCACCATCTCCTTTAAGCTTTTGAAAAGGTTGCTACCAACTCATGT-AGG
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGA-G
* * *
379717 ATTTTGAAAAGGTTGCCACCAACTTGTGTGAG
64 CTTTTGAAAAGGTTGCTAACAACTTGTGTG-G
* * ** * * * *
379749 CTTTTGAAAAGGTTGCTAACAACTTATGTGGAC--TTAAAAAGGTTGTCACCAATTCATGTG-GA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* * * * * *
379811 TTTTTCAAAAGGTTGCGACCAA-TTCTCGTAGA
64 CTTTTGAAAAGGTTGCTAACAACTTGT-GT-GG
* * * *
379843 CTTTTGAAAAGGTTGCTACCAACTCGTGTGGGCTTTTGGGCTTTTGAAAGGTTGCTATCAACTCA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTT--G-----AAAAGGTTGCCACCAACTCA
* * * * * * *
379908 TGTG-GAC-TTTGGAATGATTACCACCAACTCGTGTGGG
58 TGTGAG-CTTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * * * * *
379945 CCTTTTAAAAGGTTACCACCAACTCGTGTAGAC-TTTGAAAAGGTTGCCACCAACTCGTGT-AGG
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * * * * ***
380008 TAATTGAAAAAGTTACCACCAACTCACGTAGG
65 T-TTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * * * * **
380040 CTTTTAAAAATGTTGACAACAACTCGTGT-GGC-TTTGAGAAGGTTATCACCAACTCGTATG-GA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTC--ATGTGA
* * * *
380102 -CTTCTT-AAAAGGTTACCACCAACTCGTGTGG
63 GCTT-TTGAAAAGGTTGCTAACAACTTGTGTGG
* ** * ** * * * * * * *
380133 CTTTTGAAAAGGCTGTTACGAACTTATATGGGATATTAAAAATGTTGCCATCAACTCATGTGAGA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* *
380198 TTTTGAAAAGGTTGCT-GCTAACTCGTGTGGG
65 TTTTGAAAAGGTTGCTAAC-AACTTGTGT-GG
* * * * * * * * *
380229 CTTTTGACAAA-GTTGCTACCAACTCTTATAGACTTTTGAAAAAGTTGCCATCAACTCTTGTGGG
1 C-TTTGA-AAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG
* * * *
380293 C-TTTGAAATGGTTAC-CACAAATTTGTGTGGGCTTTTGG
64 CTTTTGAAAAGGTTGCTAAC-AA-CT-TGT--G----TGG
* ** *** * * ** *
380331 ACTATTGAAAAGGTTGCTACCAACTTTTACAGACTTTTG-AAAGGTTGCTATTAATTCATGTGCA
1 -CT-TTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTG-A
* * *
380395 -C-TTTGAAATA-GTTGCCACCAACTTGTGTGAAT
63 GCTTTTGAAA-AGGTTGCTAACAACTTGTGTG--G
* * ** * ** *
380427 TTTTTAAAAGGTT-CTTGCCAACTCGTCTGGATTTTTGAAAAGGTTGCCACCAACTCCTGTCG-G
1 CTTTGAAAAGGTTGC-CACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGT-GAG
* *
380490 CTTTTGAAAAGGTTGCCAACAACTCATTTG-GG
64 CTTTTGAAAAGGTTGCTAACAACT--TGTGTGG
* * * ** * * * * *
380522 CTTTGAAAAAGTTGTCACCAACTTGTGTGCCCATTTGCAAAGCTTACCACCAA--CGTGTGTAGG
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTG-A-G
* * * *
380585 CTTTTAAAAAGGTTGCTACCAACTCGTGCAGG
64 CTTTTGAAAAGGTTGCTAACAACTTGTG-TGG
* * * * * * ** * *
380617 ATTTTG-AAAGGTCGTCACCAACTCATGTGAGCTTTTAAAAAGGTTGCCAATAACTCGTGTGGGC
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * *
380681 -TTTGAAAAGGTTGCTACCAACTCGTGTGAA
65 TTTTGAAAAGGTTGCTAACAACTTGTGTG-G
* * * * * *
380711 CTTTTGGAAAGGTTCCCACCAACTCATGTCGGCCTTTGAAAAGGTTGCTACCAACTCATGTGAGC
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * * * * *
380776 TTTTGAAATGATTGCCACCAACTCT-TCTAGA
65 TTTTGAAAAGGTTGCTAACAACT-TGTGT-GG
* * * *
380807 CTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC-TTTGAAATGGTTTCCACTAATTCGTGTGGGC
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAA--C---T---C
* * * * * *
380871 TTTTGGGCTTTTGAAAAAGTTGCCACCAACTCT-TGTGG
57 ATGTGAGCTTTTGAAAAGGTTGCTAACAACT-TGTGTGG
* ** * * * * *
380909 ACTTTTG-AAAGGTTGGCATTAACTAGTGTGGAC-TTTGAAATA-GTTAG-CACTAACACGTGT-
1 -C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAA-AGGTT-GCCACCAACTCATGTG
* * * * **
380969 AGATTTTTCAAAAGGTTGCCACCAACTCCTGTGAG
62 AG-CTTTTGAAAAGGTTGCTAACAACTTGTGTG-G
* * * * * *
381004 CTCTTGAAGAGGTTGCCACCAACTCGTGTGGACTTTTGCAAAGGTTGCCACTAACCCAT-TGGGC
1 CT-TTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * * * *
381068 TTTTGAAATGGTTACCACCAACTCGTGTGAG
65 TTTTGAAAAGGTTGCTAACAACTTGTGTG-G
* * * * * * * * ** *
381099 CCTTT-CAAATGTTACTACCTACTCGTGTAGGATTTTG---A----GCGACCGGCTCGA-GTGGG
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTC-ATGTGAG
* * * * *
381155 ATTTTGGAAAGGTTACCACCAACTTGTGTGGG
64 CTTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * * * * * * * ** **
381187 TTTTTGAAAAGGTTGCCAACAAGTTGTGTGGAC-ATTGAAAAAGTTGTCATTAACTTGTGTG-GA
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* * *
381250 CTTTTGAAAAAGTTTCTAATAACTTGTGTGG
64 CTTTTGAAAAGGTTGCTAACAACTTGTGTGG
* * * * *
381281 AGTTTGAAAAGGTTGTCACTAACTC-TGT-GGTTTTTGAAAAGGTTGCTACCAACTCGTATGTGA
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTC--ATGTGA
* * * *
381344 --TTTTGAAAAGATTACTACCAACTTATGTGGG
63 GCTTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * ** * * ** * * *
381375 CTTTTGAAAAGGTTGCTAACAACTTATGTTGAC-TTTGAAAAGGTTGTTACTAACTCGTGTGGGC
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * *
381439 TTTTTAAAGAAAAGGTTGCCAACTACTTGTGTAGA
65 -TTTT---GAAAAGGTTGCTAACAACTTGTGT-GG
** * * *
381474 CTTTGAAAAGGTTGTTACCAACTCATGTGGGCTTTTGAAAAGGTTGTCC-CTAACTCTTGT-AGA
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTG-CCACCAACTCATGTGAG-
* * * * * *
381537 CTTTTCAAAAGGATGCCACCAACTCGTATGG
64 CTTTTGAAAAGGTTGCTAACAACTTGTGTGG
* * **
381568 ACATTGAAATA-GTTACTTCCAACTCTTGTGGGCTTTTGGGCTTTTGAAAAGGTTGCCACCAACT
1 -CTTTGAAA-AGGTTGCCACCAACTC--GT--G----TGGGCTTTTGAAAAGGTTGCCACCAACT
* * * * * * *
381632 CTTGTAAACTTTTG-AAAGGTTGCCATCAACTCGTGTAGA
56 CATGTGAGCTTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * * * * * * * * *
381671 CTTTGACATGGTTGCCGCAAACTCATGTAGGCTTTTGAAAAGGTTGCTACTAGCACATGT-ACGC
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGA-GC
* * * ** *
381735 TTTTGAAAAAGTTACTACCAACTCCTGTAGA
65 TTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * * ** * * *
381766 CTTTGACTATGG-TGCCACAAACTCGTGTGAAC-TTTGAAAAGGTTACCACTAACTCATGTGGGC
1 CTTTGA-AAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * * * *
381829 TTTTAAAAAGGTTACCACCAACTCGTGTGGG
65 TTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * * *** * *
381860 TTTCTGTAAAA-GTTACCACCAACTCATGTGAAATTTT-AAAATGGTTGCCAACAACTCGTGT-A
1 CTT-TG-AAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAA-GGTTGCCACCAACTCATGTGA
* * *
381922 GGC-ATTGAAAAGGTTGCCACCAA-TTCGTGTGG
63 -GCTTTTGAAAAGGTTGCTAACAACTT-GTGTGG
* * * * * * * ** * *
381954 ACTTCTAAAAATGTTGCCAACAACTTGTGCGGAC-TTTGAAAGGGTTGTTAGCAACTCGTGTGAG
1 -CTT-TGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG
* *
382018 CTTTTGAAGAGGTTGCTACCAACTCATGTG-GG
64 CTTTTGAAAAGGTTGCTAACAACT--TGTGTGG
* * * * * * ** * * *
382050 ATTTTGAAAAGGTTACCACCATCTTGTGTGAGCTTTTGGAGTGGTTGCCAACAACTTATGTG-GA
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* **
382114 TTTTGAAAAGGTTG-TCACCAACTCATGTGAG
65 TTTTGAAAAGGTTGCT-AACAACTTGTGTG-G
* * * * **
382145 CTTTTGAAAAGGTTGCGACCAACTC---T-CG-TTTTGAAAAGGTTACCACCATCTTGTGTGAGC
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* ** * *
382205 TTTTGGAGTGGTTGCCAACAACTTATGTGG
65 TTTTGAAAAGGTTGCTAACAACTTGTGTGG
* * * * * ** * *
382235 ATTTTGAAAAGGTTGCCACCATCTCATGTGGAC-TTTGAAAAGGTTGACATTAACTTATGTGGGC
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* ** * * *
382299 -TTTAAAAAGAGCAGC-GACAAACTCGTGTCTG
65 TTTTGAAAAG-GTTGCTAAC-AACTTGTGT-GG
* * * * * * * *
382330 CTTTTGAAAAGGTTGCTACCAATTCATGTCGTCTTTTGAAAATGTTACCACCAACTCGTGTG-GA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
***** * * *
382394 C-TTTGACTTTATTGCCACCAACTTGTCTGG
64 CTTTTGAAAAGGTTGCTAACAACTTGTGTGG
* * * * * * * * * * * * * *
382424 ACTTTGACTATGG-TACCGCCACACTTGTATAGAC-TTTAAAAAGATTACCAGCAACTCGTGTGG
1 -CTTTGA-AAAGGTTGCCACCA-ACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGA
** * * * *
382487 GCTTTTGAAAATATTAC-ATCCAACTCGTGTAGA
63 GCTTTTGAAAAGGTTGCTA-ACAACTTGTGT-GG
* * * ** ** * * *
382520 CTTTGACTATGG-TGCTATAAACTCGTGTGAAC-TTTGTAAAGGTTGCCACCAACTCCTGTGGGC
1 CTTTGA-AAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * * *
382583 TTTTGAAAAGGTTACCAACAACTCGTTTGGG
65 TTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * * ** * *
382614 CTTTGAAAATCG-TGCCACCAACACATGTGCACTTTTGCAAAAGG-TGCCACCAACTCGTGTGCG
1 CTTTGAAAA-GGTTGCCACCAACTCGTGTGGGCTTTTG-AAAAGGTTGCCACCAACTCATGTGAG
* * * * *
382677 CTTTTGAAAAGGTTACCACCAACTTATCTGAG
64 CTTTTGAAAAGGTTGCTAACAACTTGTGTG-G
* * * * * * * **
382709 ATTTTGAAAAGG-TGCTACCAACTCGAGTGAGATTTT-AAAAGGGTTGTCACAAACTTGTGTGAG
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAA-GGTTGCCACCAACTCATGTGAG
* *
382772 CTTTTGAAAAGGTTGCGAACAACTTGTATGG
64 CTTTTGAAAAGGTTGCTAACAACTTGTGTGG
* * * * * * * * **
382803 ATTTTGAAAAAGTTGTCATCAACCCGTGTGGGCTTTTGAAAAAGTTTCCAGCAACTTGTGTG-GA
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* * *
382867 C-TTTGAAAAAGTTG-TCACCAACACTGTG-GG
64 CTTTTGAAAAGGTTGCT-AACAAC-TTGTGTGG
* * * * *** *
382897 TTTTTGAAAAGATTGCTACCAACTCATGTGCTATTTTGAAAAGGTTGCCACCAACTCGTGT-AGA
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* * * * *
382961 CCTTCG-AAAGGTTGCCAACAACTTATGTTGA
64 CTTTTGAAAAGGTTGCTAACAACTTGTG-TGG
** * * *** * ** *
382992 CTTTGAAAAGGTTGTTACTAACTCGCGACAGCTTTTGAAAAGGTTACTGCCAACTCGTGTAGGCT
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGT--G--
* * *
383057 TTTAGGCTTTTGAGAAGGTTGC-CACTAACATGTGTGG
62 ---A-GCTTTTGAAAAGGTTGCTAAC-AACTTGTGTGG
** ** * * * *
383094 ACTTTGAAAAGGTTGCCATTAAGACGTGTGGGC-TTTAAATAAGGCTGCTACCAACTCATGTGGG
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAA-AAGGTTGCCACCAACTCATGTGAG
* * *
383158 CTTTTGAAAATGTTGC-CACTAACTCGTGTGG
64 CTTTTGAAAAGGTTGCTAAC-AACTTGTGTGG
* * ** * *** ** *
383189 ACTTTGACTATGG-TGCCACCAACTTTTATAAAC-TTCAAAAAGGATGCCATCCAACT-AGTGTG
1 -CTTTGA-AAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCA-CCAACTCA-TGTG
* * *
383251 AGCTTTTGAAAATGTTG-----GAC-T-T-TGA
62 AGCTTTTGAAAAGGTTGCTAACAACTTGTGTGG
* * * * ** * ** * * *
383276 C--T---ATGG-TGCCACAAACGCGTGTGAAG-TTTGAAAAGA-TTACCACCAACCCA-TGAAG-
1 CTTTGAAAAGGTTGCCACCAACTCGTGTG-GGCTTTTGAAA-AGGT--TGCC-ACCAACTCATGT
** ** * * ** * * * **
383331 G-CTTTTAAAAAGGTTGCCAACA-ACTCGTGTAG-AA
61 GAGCTTTTGAAAAGGTTGCTA-ACA-ACTTGT-GTGG
* * * * * * * * * * * * *
383365 TTTTGAAAATGTTACAACCAACTCATGTGGGCCTTTGAAATGGTTGCTACCAATTCGTTTAAGAT
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGCT
* * * *
383430 TTTGAAAAAGTTACCACCAACTCATGTG-GG
66 TTTGAAAAGGTTGCTAACAACT--TGTGTGG
* * * * * * *
383460 ATTTTGAAAAGGTTACCACCAACTCATTTGGGCTTTTGAAAATGTTGCCAACAA-T-GT-TGA-C
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * * *
383521 -TTTGAAAAAGTTG-TCACCAACTCGGGTGGG
65 TTTTGAAAAGGTTGCT-AACAACTTGTGT-GG
** ** * * * * *
383551 CTTTTGAAAAGGTTGCCACCAACTATTGTGGAATTCTAAAAAGGTTACCACTAACTCGTGT-AGA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* * *
383615 C-TTTGAAATGGTTG-TCACCAATTCGTGTGGGTTTTCAGG
64 CTTTTGAAAAGGTTGCT-AACAA--C-T-T--G-TGT--GG
* * * ** *
383654 CTTTTGAAAAGGTTGCCACCAACTCTTGTGGAC-TTTG-AAAGGTTGTCGTCAACTC-T-TACAG
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGT-GAG
* ***
383715 AC-TTTGAAATA-GTTGC-CACTAACTCATGTACAG
64 -CTTTTGAAA-AGGTTGCTAAC-AACT--TGTGTGG
* * * *
383748 TTTTGAAAAGGTTGCTACCAACTCGTGTGGGTTTTTGAAAAGGTTGCTACCAACTCATGTG-GAC
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-C
* * * *
383812 TTTTTATAAGGTTGCCAACAACTCACGTG-GG
65 TTTTGAAAAGGTTGCTAACAACT--TGTGTGG
* * * ** ** *
383843 CTTCGAAAAGGTTGCCACCAACTCGTGTGGACTATTGAAAAGGTTATCATAAACTCGTG-GAGGC
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGA-GC
* * * *
383907 CTTTGAAAAGGTTGCTACCAACATGTATGTGA
65 TTTTGAAAAGGTTGCTAACAAC-T-TGTGTGG
* * * * * * * * * * ** **
383939 TTTTGAAAAGGTTACCTCTAATTCATGCGAGATTTTGAAAAAGTTATCACCAACTTGTGTGAGCT
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGCT
* * *
384004 TTTAAAAAGGTTGCCAACAACTTGTGTAGA
66 TTTGAAAAGGTTGCTAACAACTTGTGT-GG
*** * * *
384034 CTTTGAAAAGGTTATTACCAACTCGTGTGGGCTTTTGAAAAGGTTACTACCAACTCTTGT-AGAC
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-C
* * * ** *
384098 TTTTCAAAAGGTTGCCACCAACTCATGTAGA
65 TTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * ** ** * *
384129 CATTGAAATA-GTGGCTTCCAACTTTTATGGGCTTTTGGGCTTTTAAAACGGATGCCACCAACTC
1 CTTTGAAA-AGGTTGCCACCAACTCGTGTGGGCTTTT--G-----AAAA-GGTTGCCACCAACTC
* * * *
384193 TTGT-AGACTTTTG-AAAGGTTGCCATCAACTTATGTGG
57 ATGTGAG-CTTTTGAAAAGGTTGCTAACAACTTGTGTGG
* * * * * * * *
384230 ACATTCAAATGGTTGCCACTAACTCGTGTGGGCTTTTGAAAAGGTTACCATCAACACGTGT-AGG
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGA-G
* * * ** *
384294 CTTTTGAAAAAGTTACTACCAACTCATGTAGA
64 CTTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * * * ** * * ** * * *
384326 CTTTGACTATGG-TGCCACAAACCCGTGTGAAC-ATTGAAAAGGTTACCAGTAACTCCTATGGGC
1 CTTTGA-AAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* *
384389 TTTT-AAAATGGTTAC-CACTAACTTGTGTGG
65 TTTTGAAAA-GGTTGCTAAC-AACTTGTGTGG
* * * *
384419 CTTTTTGTAAAA-GTTGCCACCAACTCGTGTGAGCTTTTAAAAAGGTTGCCAACAACTCGTGT-A
1 C--TTTG-AAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGA
* * **
384482 GGC-TTTGAAAAGGTTGCCACCAACTCATGTGG
63 -GCTTTTGAAAAGGTTGCTAACAACTTGTGTGG
* * ** * * *
384514 ACTTTTGAAAATGTTGCCAACAACTTATGTGGAC-TTTGAAAAGGTTGTCACCAACTCCTGTGAG
1 -C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG
* **
384578 CTTTTGAAAAGGTTGCTACCAACTCATGTGG
64 CTTTTGAAAAGGTTGCTAACAACTTGTGTGG
* * * * * * ** *
384609 ATTTTGAAAAGGTTGCCACTAACTTGTATGAGCTTTTGGAAAGGTTGCCAATAACTTATGTG-GA
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* * *
384673 C-TTTAAAAAGGTTG-TCATCAACTCGTGTGGG
64 CTTTTGAAAAGGTTGCT-AACAACTTGTGT-GG
** * * * * * * *
384704 CTTTTGAAAAGGTTGTGACCAACT-TTCATAGACTTTTGAAAAGGTTACCACCAACCCGTGT-AG
1 C-TTTGAAAAGGTTGCCACCAACTCGT-GTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGA-
* * * *
384767 GCTTTTGGGCTTTTGAAAGGTTGCTATCAACTCGTGTAGA
63 GCTTTT--G-----AAAAGGTTGCTAACAACTTGTGT-GG
* * * * * * *
384807 CTTTGAAATGATTACCACCAACTCGTGTCGGCCTTTT-AAAAGGTTACCACTAACTCGTGT-A-C
1 CTTTGAAAAGGTTGCCACCAACTCGTGT-GGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * * * *
384869 ACTTTAAAAAGGTTGCCACCAACTCGTGTAGG
65 -TTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * ** ** * * *
384901 -TAGTTGAAAAAGTTTCCACCAACTCACGCAGGCTTTTGAAAAGGTTGACAACAACTCGTGTG-G
1 CT--TTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG
* * * ** *
384964 C-TTTGAAAATGTT-ATCACCAACTCATATGG
64 CTTTTGAAAAGGTTGCT-AACAACTTGTGTGG
* * * * * * *
384994 ACTTCTGAAAAGGTTACCGCCAACTCATGTGGGCCTTTGAAAAGGTTGCTACCAACTCATATGGG
1 -CTT-TGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG
* * * * * * * *
385059 ATTTTAAAAATGTTGCCATCTACTCATGTGAGA
64 CTTTTGAAAAGGTTGCTAACAACT--TGTGTGG
* * * * * *
385092 TTTTGAAAAGGTTGGTC-CTAACTCGCGTGGGCTTTTGAAAAAGTTGCTACCAACTC-T-TGAAG
1 CTTTGAAAAGGTT-GCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTG-AG
* * * * *
385154 ACTTTTAAAAAAGTT-ATCATCAACTCGTGTGGG
64 -CTTTTGAAAAGGTTGCT-AACAACTTGTGT-GG
* * * *
385187 CTTTGAAATGGTTACCACCAATTTGTGTGGGCTTTTGGGCTATTGAAAAGGTTGCCACCAACT--
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGC---T----T-TTGAAAAGGTTGCCACCAACTCA
* * * *
385250 TTTACAGACTTTTG-AAAGGTTGCTATCAACTCGTGTGG
58 TGT-GAG-CTTTTGAAAAGGTTGCTAACAACTTGTGTGG
* *** * *
385288 ACTTTGAAATA-GTTACCACCAACTCGTGTGAATTTTTGAAAAGGTTCCCACCAACTCGTGTG-G
1 -CTTTGAAA-AGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG
* ** * * *
385351 ATTTTTGAAAAGGTAACCACCAACTCCTAT-TGGG
64 -CTTTTGAAAAGGTTGCTAACAACT--TGTGT-GG
* ** * * * **
385385 TTTTGAAAAGGTTGCCAATAACTCATTTGGGCTTTGGAAAA-GTTGCCACCAACTTGTGTG-GCC
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-C
* * * * * *
385448 ATTT-ACAAAGCTTACCACCAACTCGTGTAGG
65 TTTTGA-AAAGGTTGCTAACAACTTGTGT-GG
* * * * **
385479 CTTTTGAAAAGGTTGCTACCAACTTGTGTAGGATTTTG-AAAGGTTGTTACCAACTCATGT-AGG
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGA-G
* * *
385542 CTTTTGAAAAAGTTGCCAACAACTCGTGTGGG
64 CTTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * * * * * * *
385574 CTTTGAAAATGTTGCTACCAACTCGTGTGGACTTTTGAAAAGATTCCCACCGACTCATGTGGGCC
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGCT
* *
385639 TTTGAAAAGGTTGCT-ACTAACTCGTATGAG
66 TTTGAAAAGGTTGCTAAC-AACTTGTGTG-G
* * * * * * *
385669 CTTTTGAAATGATTGCCACCAACTCTTCTAGACTTTTGAAAAGGTTGCCACCAACTCGTGTG-GA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* * * *
385733 CTTTGGCAAAGGTTGCCACCAACTCATGTG-GG
64 CTTTTGAAAAGGTTGCTAACAACT--TGTGTGG
* * * * *
385765 CTTTTGAAATA-GTTACCACCAACTCGTGTGGGCCTTTG-AAAGGTTGCTACCAACTCGTGTCAG
1 C-TTTGAAA-AGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG
* * * * *
385828 ATTTTGAAAAGGTTGCGACCAACTCGAGTGGG
64 CTTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * * * * * * *
385860 ATTTTGGAATGGTTGCCACCAACTTGTGTGGGTTTTTGAAAAGGTTGCCAACAAGTTATGTGAGC
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * ** **
385925 -ATTGGAAAGGTTG-TCATTAACTCATGTGG
65 TTTTGAAAAGGTTGCT-AACAACTTGTGTGG
* *** * * ** * *
385954 ACTTTTGAAAAAGTTTTTAACAACTTGTGTAAAG--TTTGAAAAGGTTGTCACCAACTC-TATG-
1 -C-TTTGAAAAGGTTGCCACCAACTCGTGT-GGGCTTTTGAAAAGGTTGCCACCAACTCATGTGA
* * *
386015 GTTTTTGAAAAGGTTGCTACCAACTCGTGTGTGA
63 GCTTTTGAAAAGGTTGCTAACAACT--TGTGTGG
* * * * * * *
386049 TTTTGAAAAGGTTACTACCAACTCATGTGGGCTTTTGAAAAGGTTGCTAACAACTTATGTTGA-C
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATG-TGAGC
* *
386113 -TTTGAAAAGGTT-ATTACTAACTCATGTG-GG
65 TTTTGAAAAGGTTGCTAAC-AACT--TGTGTGG
* * * * * ** *
386143 CTTTTTAAAAAAAGGTTGCCAACAACTTGTGTAGAC-TTTGAAAAGGTTGTTACCAACTCGTGTG
1 C--TTT--GAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTG
* * * * *
386207 GGCTTTTGAAAAGGTGGACCCTAAC-TCTTGT-AGA
62 AGCTTTTGAAAAGGTTG---CTAACAACTTGTGTGG
* * * * * ** *
386241 CTTTTCAAAAGGTTGCCACCAACTCGTATGGAC-ATT-AAAATAGTTGCTTCCAACTCTTGTGGG
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAA-GGTTGCCACCAACTC--AT--G
* * * *
386304 CTTTTGGGCTTTTGAAAAGGTTGCCACCAACTCT-TGTAGA
60 ----TGAGCTTTTGAAAAGGTTGCTAACAACT-TGTGT-GG
* * * * * *
386344 CTTTTG-AAAGGTTGTCATCAACTCGTGTGGAC-TTTGAAATGGTTGTCACCAACTCGTGTG-GC
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * * * *
386406 TTTTGAAAAGGTTACTAGCAGCATATGTAGG
65 TTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * * * * * * * * * * *
386437 CTTTTAAAAAAGTTACTACCAACTTGTGTAGAC-TTTGACTATGG-TGCCACAAACTCGTGTGAA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGA-AAAGGTTGCCACCAACTCATGTGAG
* * * ** *
386500 C-TTGGAAAAGGTTAC-CACTAACTCATGCGAG
64 CTTTTGAAAAGGTTGCTAAC-AACTTGTGTG-G
* * * * * * *
386531 CTTTTAAAAAGGTTACCACCAACTCGTGTGAGATTTTAAAAAGGTTGCCAACAACTCGTGT-AGG
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGA-G
* * * * *
386595 C-ATTGAAAAGATTACCACCAACTTGTGTAGG
64 CTTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * * * ** * * * ** *
386626 CATCTGAAAATGTTGCAAACAACTTATGTGGAC-TTTGAAATGGTTACCACCAACTTGTGTGGGC
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * * *
386690 CTTTG-AAAGGTTGCTACCAACTCGTGTCAGA
65 TTTTGAAAAGGTTGCTAACAACTTGTGT--GG
* * * * * * * * *
386721 TTTTGAAAAGGTTGCGACCAACTTGAGTAGGATTTTGGAAAGGTTGTCACCAACTC-TGTG-GTT
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGCT
* * *
386784 TTTGAAAAAGTTGCTACCAACTCATGTGTGA
66 TTTGAAAAGGTTGCTAACAACT--TGTGTGG
* * * * * * * * *
386815 TTTTGAAAAAGTTACTACCAACTCTTGTAGACTTTTG-AAAGGTTGCCATCAACTCGTGTG-GAC
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-C
* * * *
386878 -TTTGAAATGGTTGCCACCAACTCGTGTAGG
65 TTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * ** * * * * * * *
386908 CTTTTGAAAAGGTTACTACCAACAAGTGTAGGCTTTTGAAAAAGTTACTATCAACTCGTAT-AGA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* * * * *
386972 C-TTTGACTATGG-TGC-CACAACCTCGTGTGAA
64 CTTTTGA-AAAGGTTGCTAACAA-CTTGTGTG-G
** * * * * * *
387003 CTTTGAAAAGGTAACCACTAACTCCTGTGGGCTTTTAAAAAGGTTACCACCAACTCGTGTG-GGT
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGCT
* * ** *
387067 TTCTCCAAAA-GTTAC-CGCTAACTCGTGT-G
66 TT-T-GAAAAGGTTGCTAAC-AACTTGTGTGG
* ** * * * * * *
387096 ---AGATAAAGGTTGCTGCTAACTCATCTTGACTTTTGAAAAGTTTGCCACCAACT-AT-TGTAG
1 CTTTGA-AAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTG-AG
* * * *
387156 ACTTTTGAAAAAGTTACCACCAACTCATGTG-GG
64 -CTTTTGAAAAGGTTGCTAACAACT--TGTGTGG
* * * * * *
387189 CTTTGAAATGGTTGCTACCAATTTGTGTGGACTTTTGGGCTATTAAAATGGTTGCCAGCAACTTT
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTT--G-----AAAA-GGTTGCCACCAAC--T
* * * * **
387254 TACG-GA-TTTTTG-AAAGGTTGCTATCAACACGTGTGG
56 CATGTGAGCTTTTGAAAAGGTTGCTAACAACTTGTGTGG
* * * * *** * *
387290 ACTTT-AAAATAGTTTCCACCAACACATGTGAATTTTTGAAAAAGTTGCCACCAACTCGTGT-AG
1 -CTTTGAAAA-GGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG
* * * * ** *
387353 ATTTTTGAAAAGGTTGCCACCATCTCCTGTCAG
64 -CTTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * * * * **
387386 CTTTTGAAAAGGTTACCAACAACTCATTTGGGC-TTTGAAAAAGTTGCCACCAACTTGTGTG-GC
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* * * * * * *
387449 CATTTGCAAAGCTTAAC-ACCAACTCGTGCAGG
64 CTTTTGAAAAGGTT-GCTAACAACTTGTG-TGG
* * * * * * *
387481 CTTTTAAAAAGGTTGCTACCAACTCATGTAGGATTTTG-AAAGGATGTCACCAACTCATGTG-GC
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* *
387544 TTTTGAAAAGGTTGCCAACAACTTTTGTGGG
65 TTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * * * *
387575 CTTTGAAAAGGTTGCTACCAACTAGTGTGGACTTTTGAAAAGGTTCCCACTAACTCATGTG-GAC
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-C
* * * *
387639 CTTTGAAAAGGTTGCTACCAACTCGCGTGAG
65 TTTTGAAAAGGTTGCTAACAACTTGTGTG-G
* ** * * * * *
387670 CTTTGGAAAAGGTTTCCAAAAACTTGTGTGGAC-TTTGAAAAGGTTGCCACCAACTCGTGTGTGA
1 CTTT-GAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * * *
387734 TTTTGAAAAGTTTTCCACCAACTCATGTG-GG
65 TTTTGAAAAGGTTGCTAACAACT--TGTGTGG
* * * * * * * *
387765 ATTTTGAAAAGGTTACCACCAACTCATATGGGCCTTTGAAAAGGTTGCTACCAACTCATGTGGGA
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * * *
387830 TTTTGAAATA-GTTGCCACCAACTCT-TCTAGA
65 TTTTGAAA-AGGTTGCTAACAACT-TGTGT-GG
* * * * * * * *
387861 CTTTTGAAAAGGTTGTCACCAACCCATATGGAC-TTTGAAATGGTTGTCACTAATTCGTGTGGGC
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAA--C---T---C
* * * * * *
387925 TTTTGGGCTTTTGAAAAGGTTGCCACCAACTCT-TGTGAA
57 ATGTGAGCTTTTGAAAAGGTTGCTAACAACT-TGTGTG-G
* ** * * * * **
387964 CTTTTG-AAAGGTTGGCATTAACTCGTGTGGACTTTT--ATA-GTTACCACTAACTTGTGTG-GA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* * * ** *
388024 ATTTTGAAAAGGTTG-TCACCGACTCCTATGAG
64 CTTTTGAAAAGGTTGCT-AACAACTTGTGTG-G
* * * * *
388056 CTCTTGAAAAGGTTGTCACCAACTCATGTGGCCTTTTGCAAAGGTTGCCACCAACTCATGTGGGC
1 CT-TTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * * * *
388121 TTTTGAAATGGTTACCACCAACTCGTGTGGG
65 TTTTGAAAAGGTTGCTAACAACTTGTGT-GG
** ** * * * * *
388152 TCTTTG-AAAGGTTGTTACCAACTCGTGTCAGATTTTGAAAAGGTTACGACCAAATCGA-GTGGG
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTC-ATGTGAG
* * * *
388215 ATTTTGGACAA-GTTGCCACCAACTTGTGTGGG
64 CTTTT-GAAAAGGTTGCTAACAACTTGTGT-GG
* * * * * * * * * *
388247 ATTTTAAAAAAGCTGCCACCAACTTGTGTGGAC-GTTGAAAAGGTTGTCACTAACTCGTGTG-GA
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
*
388310 CTTTTGAAAAAGCTT-CTAACAACTTGTGTAGAG
64 CTTTTG-AAAAGGTTGCTAACAACTTGTGT-G-G
* * * * * * *
388343 -TTTGAAAAGTTTGTCACCAACTC-TAT-GG-TTTTGACAAAGGTTGCTACCAACTCGTGTGTGA
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGA-AAAGGTTGCCACCAACTCATGTGAGC
* * * *
388404 TTTTGAAAAGGTTACCACCAACTCGTGTGGG
65 TTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * * * * * * *
388435 ATTTTGAAAAGGTTGCTAACAACTTGTGTGGAC-TTTGAAAAGGTTGTCACCAACTCGTCT-AGG
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGA-G
* * * **
388498 CTTTTGAAAAGGTTGCCACCAATTCTTCTAG-AC
64 CTTTTGAAAAGGTTGCTAACAA--CTTGT-GTGG
* * *
388531 CTTTGAAAAGGTTGCCACCAACTC-TGTGGAC-TTTGAAATGGTTGCCACCAATTCGTAGGGGCT
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAA--C-T-----CA
* * * * * *
388594 TTTGGGCTTTTGAAAAAGTTGCCACCAACTCGTGTGG
58 TGTGAGCTTTTGAAAAGGTTGCTAACAACTTGTGTGG
** * ** * * * *
388631 ACTTTTG-AACTGTTGGCATGAACTCGTGTAGAC-TTTGAAATA-GTTACCACCAACTCGTGTG-
1 -C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAA-AGGTTGCCACCAACTCATGTGA
* * * *
388692 GATTTTTGAAAAGGTTGCCACCAACTCGTGTGG
63 G-CTTTTGAAAAGGTTGCTAACAACTTGTGTGG
** * * * ** * * *
388725 ACTTTGACTAGGGTGCCACAAACTCGGGTGAAC-TTTGTAAAGGTTGCCACCAACTCCTGTGGGC
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * * * **
388789 TCTTGGAAAGGTTGCCACCAACTCCTGTGG
65 TTTTGAAAAGGTTGCTAACAACTTGTGTGG
* * * * * * *
388819 ACTTTTGCAAAGGTTGCCACCAACTCATGTGGGCTTTTGAAATGGTTACTACCAACTCGTGTGGG
1 -C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG
* * *
388884 CCTTTGAAAAGGTTGCTACCAACTCATGT-TAGA
64 CTTTTGAAAAGGTTGCTAACAACT--TGTGT-GG
* * * * * ** *
388917 TTTTGAAAAGAG-CGCCACCAACTC------G--ATTAAAAAGGTTGCCACCAATTTGTGTAAGC
1 CTTTGAAAAG-GTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * *
388973 TTTTGAAAAAGTTTCCAACAACTTGTGTGG
65 TTTTGAAAAGGTTGCTAACAACTTGTGTGG
* * * * * * *
389003 ACTTTGAAGAGGTTGTCACCAACTC-TATGGGTTTTTGAAAAGGTTGCAACCAACTCATGTGCGA
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * * * *
389067 TTTTCAAAAGGTTACCACCAACTCGTGTGGG
65 TTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * * * *** *
389098 CTTTTGAAAAGGTTGCCAACAACGT-GTGTTGAC-TTTGAAAATGTTATTACTAACTCATGT-AG
1 C-TTTGAAAAGGTTGCCACCAAC-TCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGA-
* *
389160 GCTTTTGAAAAGCTTGCTACCAACTCGTGTGGGCTTTTGGG
63 GCTTTTGAAAAGGTTGCTAACAACT--TGT--G----T-GG
* * ** * * *
389201 CTTTTAAAAAGGTTGTCACCAACTCGTGTGAAC-TTTAAAAAGGTTGCCATCAACTCATGTGGGC
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
** * * * * *
389265 TTTAAAAAAGGCTGCCACCAAATCGTGTGGG
65 TTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * * *
389296 CTTTTGAAAACGTTGCCATCAACTCATGTGGAC-TTTGAAAAGGTTGCCACCAA--C-T-T-A--
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * *
389353 -TGTG--AA-CTT-CTAA-AA-ATGT-TGG
65 TTTTGAAAAGGTTGCTAACAACTTGTGTGG
* * * * * * * * * *
389375 ACTTTGAAAAGGTTGCCAACAAATTGTGT-GGATTTTGAAAAGTTTTCTATCAACTCATGTGGGA
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * * * *
389439 TTTTGAAAAGTTTGCTACCAACTCATATGAGA
65 TTTTGAAAAGGTTGCTAACAACT--TGTGTGG
* * * * * *
389471 TTTTGAAAAGGTTACCACCAACTCGTGTGGCCTTTTGAAAAAGTTGCCAACAACTTGTATG-GA-
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAAC-T-CATGTGAG
* *
389534 C-TTTGAAAAGGTTGCTAGCAACTCGTGTGG
64 CTTTTGAAAAGGTTGCTAACAACTTGTGTGG
** ** * * * * * * * *
389564 ACTTTGAAAAGGTTGCCATGAACTTTTGTAGACTTTTGAAAAAGTTACCGCCAATTCGTGTGAAC
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * * * *
389629 -TTTGAAATGGTTACCACCAATTCATGTGAGCTTTTAGG
65 TTTTGAAAAGGTTGCTAACAA--C-T-T--G--TGT-GG
* * * * * * ** **
389667 CTTTTGAAAAGTTTGCCACCAACTCTTGCGGACTTTTG-AAGGGTTGCTATTAACTTGTGTG-GA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
*
389730 C-TTTGAAATA-GTTGCCCTTAACAA-TTTTG-GG
64 CTTTTGAAA-AGGTTG--C-TAACAACTTGTGTGG
* * * * **
389761 CTTTTTAAAAGGTTGCCACCAACTCATGTGGGC-TTTGAAAAGGTTACCCCCAACTTGTGTG-GA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
**
389824 C-TTTGAAAAGGTTGCTTTCAACCCTTGTG-GG
64 CTTTTGAAAAGGTTGCTAACAA--CTTGTGTGG
* * * * * *** ** * *
389855 CATTTAAAAAGGCTACCAACAACTAGTACAGGCTTTTGAAAAAATTGCCACCAACTTATGCG-GA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* * * *
389919 C-TTTGAAATGGTTTC-CACTAACTTGTATGGG
64 CTTTTGAAAAGGTTGCTAAC-AACTTGTGT-GG
* * * *
389950 CTTTGAAAAGGTTGCCACCAACTCATGTGGAC-TTTGAAAAGGTTGCCATCAACTCATGTGTGCT
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGCT
* * * **
390014 TTTAAAAAGGTTGCTACCATCTCATGTGG
66 TTTGAAAAGGTTGCTAACAACTTGTGTGG
* * ** * * * * **
390043 CTTTTGAAAATGTTACCAATAACTCGTGTGGGCTTTCGAAAATGTTGCCACAAACTCGTGT-AAA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * * * ** *
390107 ATTTGAAAAAGGTTTCCACCAACTCATCTGCG
65 TTTTG-AAAAGGTTGCTAACAACTTGTGTG-G
* * ** * * * *
390139 CTTTTAAAAAGGATGCCACCAACTCGTGTGGATTTTTGAAAAAGTTACCACCAACTCGTGTGGGC
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * * *
390204 CTTTGAAAAGGTTGCTACCAATTTATGTGGG
65 TTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * * * * * * * * * **
390235 ATTTTAAAAAAGTTACCACCAACTCATGTGAGATTTTGAAAGGGTTGTCAACAACTTGTGTG-GA
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* * * * *
390299 C-TTTAAAAAGGTTGCCACCTACTAATATG-GG
64 CTTTTGAAAAGGTTGCTAACAACT--TGTGTGG
** * * * * * ** *
390330 CTTTTGAAAAGGTTGCCATTAACTCTTCTAGACTTTTGAAAAGGTTGCCACCAACTCTTACGAAC
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * *
390395 TTTTG-AAAGGTTGCCATCAACTCGTGTGG
65 TTTTGAAAAGGTTGCTAACAACTTGTGTGG
* * * ** *** * * * *
390424 ACCTTGAAAAAGTTGCCCCCAACTCACGTGAATTTTTTATAAGGTTGCCCCCAACTCGTGTG-GA
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* * * * * *
390488 CTTTTGAAAAGGCTCCCACCAACTTCTGTCAG
64 CTTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * *
390520 CATTTGAAAAGGTTGTCGA-CAACTCGTTTGAGC-TTTGAAAAGGTT-CTCACCAACTCATGTG-
1 C-TTTGAAAAGGTTG-CCACCAACTCGTGTGGGCTTTTGAAAAGGTTGC-CACCAACTCATGTGA
* * * * * * * *
390581 GCCATTTGCAAAGCTTACGACCAACTCGTGTAAG
63 G-CTTTTGAAAAGGTTGCTAACAACTTGTGT-GG
** * * * * * *
390615 CTTTTGAAAAAATTGCTACCAACTCGTGTGAGATTTTG-AAAGGTTGCCACCAACTCGTGTGGGA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * * *
390679 TTCTGAAAATGTTGCCACCAACTCATGTG-GG
65 TTTTGAAAAGGTTGCTAACAACT--TGTGTGG
* * * * * * *
390710 CTATTGAAATA-GTTGCCAACAACTTGTGTAGAC-TTTGAAAAGGTTGTCACCAACTCGTGTGGG
1 CT-TTGAAA-AGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG
* * * *
390773 ATTTTGAAAAGTTTCCTACCAA-TTCGTGTGGG
64 CTTTTGAAAAGGTTGCTAACAACTT-GTGT-GG
* * * *
390805 ATTTTGAAAAGGTTACCACCAACTCGTGTGGCCTTTTGAAAAGGTTGCCGA-CAACT--TGTATA
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCC-ACCAACTCATGT-GA
* * * *
390867 GAC-ATT-AAAATGATTGCCACCAACTCATGTG-GG
63 G-CTTTTGAAAA-GGTTGCTAACAACT--TGTGTGG
* * ** ** * * * * *
390900 CTATTGAAATGGTTTCCAATAACTTATGTGGAC-TTTGAAAAGGCTGTCACCAACTCATGTGGGA
1 CT-TTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * * *
390964 TTTTGAAAAGTTTCCTACCAACTCGTGTGGG
65 TTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * * * *
390995 ATTTTGAAAAGGTTACCACCAACTCGTGTGGCCTTTTGAAAAGGTTGCCAACAACTTGTATG-GA
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAAC-T-CATGTGA
* * * * **
391059 -C-ATTAAAAAGGTTGCCACCAACTCATGTGG
63 GCTTTTGAAAAGGTTGCTAACAACTTGTGTGG
* * * *
391089 ACTTT-AAAATAGTTGCCACCAACCAGTGCGGGCTTTTGGGCTTTTGAAAAGTTTGCCACTAACT
1 -CTTTGAAAA-GGTTGCCACCAA-C--T-C--G--TGTGGGCTTTTGAAAAGGTTGCCACCAACT
* * **
391153 CTTGTG-GACTTTTG-AAAGGTTGCTATCAACTCATGTGG
56 CATGTGAG-CTTTTGAAAAGGTTGCTAACAACTTGTGTGG
* * *
391191 ACTTTGAAATA-GTTGCCACCAACCAGTGCGGGCTTTTGGGCTTTTGAAAAGTTTGCCACTAACT
1 -CTTTGAAA-AGGTTGCCACCAA-C--T-C--G--TGTGGGCTTTTGAAAAGGTTGCCACCAACT
* * *
391255 CTTGTG-GACTTTTG-AAAGGTTGCTATCAACTCGTGTGG
56 CATGTGAG-CTTTTGAAAAGGTTGCTAACAACTTGTGTGG
* * * * * * *
391293 ACTTTGAAATGGTTGCCACCAACTCGTGTGAGCCTTTAAAAAGGTTACCACCAGCTCATATGAGC
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * * *
391358 TTTTGAAAAAGTT-TTCACCAACTCGTGTGG
65 TTTTGAAAAGGTTGCT-AACAACTTGTGTGG
* * * * * * *
391388 ACATTGAAAAGGTTGCCACCAACTAGTTTAGGCTTTTTAAAATGG-TGCCAACAACTCGTGTG-G
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAA-GGTTGCCACCAACTCATGTGAG
* * *
391451 ATTATGAAAAGGTTGC-CACAAACTCATGT-TGG
64 CTTTTGAAAAGGTTGCTAAC-AACT--TGTGTGG
* * * ** * *
391483 CTTTGAAAAGCTTGCC-TCAACTCGTGTGGGC-TTTGAAAAGATTGCTTCCAACTCGTGTGAAC-
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGCT
* *
391545 TTT-AAAAGGTTAC-AATCAACTCGTGTGAG
66 TTTGAAAAGGTTGCTAA-CAACTTGTGTG-G
* * * * * * *
391574 CTTTTAAAAAGGCTGCCAACAACTCATGTGGGCATTTGAAAAGATTGGCACCAAC-CTATGTG-G
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTC-ATGTGAG
** * * *
391637 AATTTGAAAAGATAGC-CACAAACTTGTGTGGG
64 CTTTTGAAAAGGTTGCTAAC-AACTTGTGT-GG
* * *** * * * * **
391669 CTTGGAAAAGGCTATTACCATCTCATGTGGGC-TTTGAAAGGGTTGCCATCAACTTGTGTG-GAC
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-C
* * * * * * **
391732 -ATTGAAATGGTTGCCACCAACTAGTTTAAA
65 TTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * * * * * *
391762 CTTTTTAAAAGGTTGCCACCAACTTGTGTAGAC-TTTGAAAAGGCTGCCACAAACTCGTGTTG-G
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATG-TGAG
* * * *
391825 C-TTTGAAAAGGCTACT-GCAACTCGTGTAGG
64 CTTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * *** * * * *
391855 CTTTGAAAAGATTGCCTCCAACTCGTGTAAAC-TTTGAAAAAGTTGTCATCAACTCATGTGGGCT
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGCT
** * * * * *
391919 TTCAAAAAGGCTGCCAACCACTCGTCTGGG
66 TTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * * * * * * * ** *
391949 CTTTTAAAAAGATTGCGACCAACTCATGTGGAC-ATTGAAATGGTTGCCACTAACTTGTGTGGGC
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * * *
392013 -TTGGAAAAGGTTGCCACCAACTCATATG-GG
65 TTTTGAAAAGGTTGCTAACAACT--TGTGTGG
* * * *
392043 CTTTGAAAAGGTTGCCATCAACTCGTGTGGGCTTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGCT
* * * **
392108 TTTAAAAAGGTTGCCACCAACTCATGTGG
66 TTTGAAAAGGTTGCTAACAACTTGTGTGG
* ** * * * * * * * * *
392137 ATTTTTGAAAATATTACCACTAACTTGTATGGACCTCTCAAAAGGTTACCACCAACTCATGTG-G
1 --CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG
* *
392201 AC-TTTGAAATGGTTGC-CACTAACTTGTGTGGG
64 -CTTTTGAAAAGGTTGCTAAC-AACTTGTGT-GG
* ** * *** * *
392233 CTTTGAAAAGGTTTCCACCAACTTATGTGGAC-TTTGAAAAGGTTATTATCAACTCGTGT-AGGC
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGA-GC
* * * * *
392296 TTTTCAAAAGGCTGCCACCAACTCGTGTGGG
65 TTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* ** * * *
392327 CTTTTGAAAAGGTTGCCAACAACTCGTGTGGGCTTTCAAAAATGTTTCCACCAA-TGCGTGTG-G
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACT-CATGTGAG
*** * * * *
392390 AC-TTTGACTGTGGTGGC-ACCAACTTGTATAGA
64 -CTTTTGA-AAAGGTTGCTAACAACTTGTGT-GG
* * * * * * * *
392422 TTTTGAAAAGGTTACCACCAGCTCGTGTGAGCTTTTGAAAAGGTTACCACAAACTCGTGTGAAC-
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGCT
* * * *
392486 TTTGAAATGGTTGCCACCAA-TTCGTTTGG
66 TTTGAAAAGGTTGCTAACAACTT-GTGTGG
* * * * * *
392515 ACTTT-AAAATGGTTGCCTCAAACTAGTGTGGACTTTTGAAATGGTTGGCACCAACTCATGT-AT
1 -CTTTGAAAA-GGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGA-
* * * *
392578 AC-TTTGAAAATGTTG-TCACCAACTCGTGTAGG
63 GCTTTTGAAAAGGTTGCT-AACAACTTGTGT-GG
* * * * * ** * * *
392610 CTTTAAAAACGTTGCCACCAACTCGAGTGGAC-TCTGAAAAGGTTGTTATCAACTCGTGTGGGCT
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGCT
*** * ** ** *
392674 TTT-AAAATCACTGCCATTAACTCATGTAGA
66 TTTGAAAA-GGTTGCTAACAACTTGTGT-GG
* ** * * * * * **
392704 CTTTGAAAAGGTTGCCCCCAACGAGTGTAGACTTTT-AAAATGATTACCACAAACTTGTGTG-GA
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAA-GGTTGCCACCAACTCATGTGAG-
* * ** * * *
392767 C-ATTGACAAGGTCACCATCAGCTCATGTG-GG
64 CTTTTGAAAAGGTTGCTAACAACT--TGTGTGG
* * ** * *
392798 CTTTTGAAAAGGTTACCACCAACTCGTGCGGGCTTTTGAAATTGTTGCTACCAACTCGTGTG-GA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* * * * * *
392862 C-TTTGACTATGGTTTC-ACCAACTTGTATAGA
64 CTTTTGA-AAAGGTTGCTAACAACTTGTGT-GG
* * * * *
392893 CTTTGAAAAGGTTACCACCAACTTGTAT-GGCTTCTGAAAAGGTTGCCACCAATTCCTAT-TGA-
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACT-C-ATGTGAG
* * * * * *
392955 C-TTTGACTATGG-TGCCATCAACGTGTGTAGA
64 CTTTTGA-AAAGGTTGCTAACAACTTGTGT-GG
* * * * * * *
392986 CTTTGAAACA-GTTGCCACCAAATCATGTGGGCTTTTAAAAAGGTTGGCACCTACTCGTTTG-GA
1 CTTTGAAA-AGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* * * * *** *
393049 TTTTTGTAAATGTTACCCCCAACTTATGTGG
64 CTTTTGAAAAGGTTGCTAACAACTTGTGTGG
* * * ** * *
393080 ATCTTTGAAAAAGTTGCTACCAACTCATGTGGAATTTTAAAAAGGTTGCCACCAACTC-TGGTGG
1 --CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCAT-GTGA
* * * *
393144 GATTTTGAAAGGGTTGCTACCAACTTATGTGG
63 GCTTTTGAAAAGGTTGCTAACAACTTGTGTGG
** * * * * * **
393176 ACTTACAAAAGGTTGTCACCAATTCGTGTGGGCTTTTGAAAAAGTTTCCAACAACTTGTGTG-GA
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
*
393240 C-TTTGAAAAGGTTG-TCACAACTCTGTG-GG
64 CTTTTGAAAAGGTTGCTAACAACT-TGTGTGG
* * * * * * *
393269 TTTTTGAAAATGTTGCTACCAACTCATGTGCGATTTTGAAAAGGTTGCCACCAACTCGTGTG-GA
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* * * * * * **
393333 C-TTTGACAATGG-TACCACCAACTTTTATATA
64 CTTTTGA-AAAGGTTGCTAACAACTTGTGT-GG
* * * * * ****
393364 TTTTGAAAAGGTTGCCACCAACTCATGTGAGCTTTTGAAAATGTTAGACTTTGACT-ATGGTGCC
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTT-GCCACCAACTCAT-GTG--
* * ** * * * *
393428 ACAAACTCATGTGAACTTTGGTAGCCACCAACTTATGTGGG
62 ---AGCT--TTTGAA--AAGGTTGCTAACAACTTGTGT-GG
* * * * * ** * * *
393469 CTTTTAAAAATGTTCCCACCAACTCTTGCGGATTTTTGAAAAGGTTACCACTAAAT-ATGTG-GT
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* * *
393532 CCTTTGAAAAGGTTGCTACCAACTCGTGTGGG
64 CTTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * * * * * * * *
393564 ATTTTGAAAAGGTTACCACCAACTCGTCTGAGATTTTGAAAAGGTTGCTAGCAACTCTTGTGGGC
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* *
393629 TTTTGAAAAGGTTGCCAACAACTTGTATGG
65 TTTTGAAAAGGTTGCTAACAACTTGTGTGG
* * * *
393659 ACTTTGAAAAGGTTGTCACCAACTCCTGTAGGCTTTT-AAAATGGTTGCCACCAACTCTTGT-AG
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAA-GGTTGCCACCAACTCATGTGAG
* * * *
393722 ACTTTTGAAAATGTTGCCACCAACTCGTGTGG
64 -CTTTTGAAAAGGTTGCTAACAACTTGTGTGG
* * * * * *
393754 ACTTTGAAATGGTTGCCACAAATTCATGTAAGCTATTGGGCTTTTTAAAAGCTTGCCACCAATTC
1 -CTTTGAAAAGGTTGCCACCAACTC--GT--G----TGGGCTTTTGAAAAGGTTGCCACCAACTC
* * *
393819 TTGTG-GACTTTTG-AAAGGTTGC-AATCAACTCGTGTGAA
57 ATGTGAG-CTTTTGAAAAGGTTGCTAA-CAACTTGTGTG-G
** ** * ** * *
393857 CTTTGAAATTGTTGCCATTAACTCGTGTAGATTTTTGAAAAGGTTGCCACCAACTCGTATG-GCC
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-C
* * * * * *
393921 ATTTGCAAAGCTTAGC--GCTAACTTCTATAGG
65 TTTTGAAAAGGTT-GCTAAC-AACTTGTGT-GG
* * * *
393952 CTTTTGAAAAGGTTGCTACCAACTCGTGTGGGATTTTG-AAAGGTTACCACCAACTCATG-CAGG
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGA-G
* * *
394015 ATTTTGAAAAGGTTGCTACCAACTTGTGTTAG
64 CTTTTGAAAAGGTTGCTAACAACTTGTG-TGG
* * * * * ** * * *
394047 CTTTTGAAAAGGTTGCCAACAATTTGTGTGGAC-TTTGAAAAAGTTATCACCAACTCGTATGGGC
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* * * * *
394111 TTTTGAAAAGGTTGCGACCAACTCTCAT-AGA
65 TTTTGAAAAGGTTGCTAACAACT-T-GTGTGG
* * * * * * *
394142 CTTTTGAAAATGTT-CCTACCAACTCTTGTGGGATTTTAAAAAGTTTGCTACCAACTCATGTAAG
1 C-TTTGAAAAGGTTGCC-ACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG
* * * * * * *
394206 ATTTTGAAAAAGTTACCACCAACTCGTATGG
64 CTTTTGAAAAGGTTGCTAACAACTTGTGTGG
* * * * * * *
394237 CATTTTGAAAAGGTTGCCAACAACTTGTATGGAC-TTTGAAAAGGTTGTCATCAACTCGTGTG-G
1 C--TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG
* * *
394300 AC-TTTGAAAAGGTTGC-CACGAA-TATTTGTAGA
64 -CTTTTGAAAAGGTTGCTAAC-AACT-TGTGT-GG
** * * *
394332 CTTTTGAAAAGGTTAACACCAACTCGTGTGGAC-TTTGAAATGGTTGCCACCAACTCGTGTGGGC
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTC--AT--G-
* * * *
394396 TTTTGGGCTTTTGAAAAGTTTGCTACCAACTCT-TATGG
60 ---TGAGCTTTTGAAAAGGTTGCTAACAACT-TGTGTGG
* * * * * * *
394434 ACTTCT-AAAAGGTTGCTATCAACTCGTGT-GGATTTTGAAATGGTTTCCACCAACTCGTGTAAG
1 -CTT-TGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG
* * * * * * * *
394497 CCTTTAAAAAGTTTACCACCAAATCGTGTGAG
64 CTTTTGAAAAGGTTGCTAACAACTTGTGTG-G
* * * *
394529 CTTTTGAAAAGGTTGCCACCAACTCGTGTGGAC-ATTGAAAAGGTTGCCACCAACT-AGTTTGGG
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCA-TGTGAG
** * * * *
394592 CTTCTT-AAAATCTTACCACCAACTCGTGTGG
64 CTT-TTGAAAAGGTTGCTAACAACTTGTGTGG
* *
394623 ACTTTGAAAAGGTTACCACTAACTCGTGTGGGC-TTTGAAAAGGTTGCC-CCAACTCATGTG-GA
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* * **
394685 C-TTTGAAAAGGTTGCCATCAACCCGTGTGGG
64 CTTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * * * * ** *
394716 CTTTTAAAAAAGCTGCCAACAACTAGTGCAGGCTTTTGAAAAGATTGCCACCAACTCATGTG-GA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* * *
394780 C-TTTGAAATGGTTGC-CACTAACTTGTGTGTT
64 CTTTTGAAAAGGTTGCTAAC-AACTTGTGTG-G
* * * * * ** *
394811 CTTTGAAAAGGTTGCCACCAACTCATGTGGAC-ATTGAAAAGGTTACCATCAACTGGTGTGGGCT
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGCT
* * * * *
394875 TTTAAAAATGTT-ATCATCAACTCGTGTAGG
66 TTTGAAAAGGTTGCT-AACAACTTGTGT-GG
* * * * *
394905 CTTTTAAAAAGGCTGCCACCAACTCGTGTAGGCTTTTGAAAAGGTTGCCAACAACTCATGTGGGC
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
** ** * * * *
394970 TTTCAAAAATATTACCACCAACTTGAGTGG
65 TTTTGAAAAGGTTGCTAACAACTTGTGTGG
* ** * * * * * * *
395000 AC-TT-CAACTGTAGTGCCACCAAGCT-GTATAGAC-TTTGGAAAGGTTGCTACGAA--GATGT-
1 -CTTTGAAAAGGT--TGCCACCAA-CTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTG
* * *
395058 -G----TG---AGCTT-CTAA-AA-ATGT-TAGA
62 AGCTTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * * * ***
395080 CTTTGACTATGG-TGCCACAAACTCATGT-GAAATTTGAAAAGGTTGCCACCAACTCATGTGAGC
1 CTTTGA-AAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGC
* **
395143 TTTTAAAAAGGTTGACT--CTAACTCATGTGG
65 TTTTGAAAAGGTTG-CTAAC-AACTTGTGTGG
* * * * * *
395173 ATTTTTGAAAAGGTTACCACTAACT-GTGTGGGCCTTTGAAAAGGTTGCAACCAACTCGTGT-AG
1 --CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGA-
* * * * *
395236 GATTTTGAAAAAGTTACCACCAACTCATGTG-GG
63 GCTTTTGAAAAGGTTGCTAACAACT--TGTGTGG
* * * * * * **
395269 ATTTTGAAAAGGTTGCCAACAACTCGTGCGGGCATTTGAAAAGGTTACCAACAACTTGTGTG-GA
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* **
395333 C-TTTGAAAAGGTTG-TCACCAACTCATGTGAG
64 CTTTTGAAAAGGTTGCT-AACAACTTGTGTG-G
* * * ***
395364 CTTTTGAAAAGGTTACCACCAACTCTTCTAAACTTTTGAAAAGGTTGCCACCAACTCATGT-AGA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* * * *
395428 C-TTTGAAATGGTTGCCACCAATTCGTGTGGGCTTTTGGG
64 CTTTTGAAAAGGTTGCTAACAA--C-T-T--G--TGT-GG
* ** * * * * *
395467 CTTTTGAAAAGGCTGCCATAAACTCTTATGGACTTTTG-AAAGGTTGCCATCAACTCGTGTG-GA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* * * * * *
395530 C-TTTGAAAAAGTTACCACCAACTCGTGTGAAT
64 CTTTTGAAAAGGTTGCTAACAACTTGTGTG--G
* * * * ** * * * *
395562 TTTTGAAAAGGTTGCTACCAACTCATGTAGATTTTTGAAAAGGTTCCCACCAACTCCTATCAGCT
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGCT
* ** * *
395627 TTT-ACAAGGTTGCCGACAACTCGTTTGGG
66 TTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * ** * * * *
395656 CTTTGGAAAAGGTTGCCACCAATTCCTGTGACCATTTGCAAAGCTTACCACCAACT--TGTGTAG
1 CTTT-GAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTG-A-
* *
395719 GCTTTTGAAAAGATTGCT-ACTACCTCATGTG-GG
63 GCTTTTGAAAAGGTTGCTAAC-AACT--TGTGTGG
* * * * * * * * *
395752 ATTTTG-AAAGGTTGCCTCCAACTCATATGGGATTTTGAAAATGTTGCCACCGACTCGTAT-AGA
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* * * * *
395815 CTTTTAAAAAGGTTGCCAATAACTTGTATAGA
64 CTTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * * * * * **
395847 TTTTAAAAAGGTTGTCACCAACTCGTGTAGAC-TTTGAAAAGGTTGCCACTAACTTTTGT-AGAC
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-C
* *
395910 TTTTG-AAAGGTTGCCACCAACTTGTGTGG
65 TTTTGAAAAGGTTGCTAACAACTTGTGTGG
* * * * *
395939 CCTTTTGAAAAGGTTGCCAACAACTTGTATGGGC-TTTAAAAAGGTTGTCACCAACTCATGTG-G
1 -C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG
* * * *
396002 AC-TTTGAAAAGGTTGC-CACTAACTTTTGCAGA
64 -CTTTTGAAAAGGTTGCTAAC-AACTTGTG-TGG
* * *
396034 CTTTTGAAAAGGTTACCACCAACTCGTGTGGAC-TTTGAAATGGTTGCCACCAACTCATGT-AGG
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGA-G
*
396097 CTTTTGGGCTTTTAAATA-GTTAC-ACACCAACTCT-TGTGG
64 CTTTT--G-----AAA-AGGTTGCTA-A-CAACT-TGTGTGG
* * ** * * *
396136 ACTTTTG-AAAGGCTGCTATTAACTCGTGTGGAC-TTT-AAAATGGTTGCTACCAACTCATGTAA
1 -C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAA-GGTTGCCACCAACTCATGTGA
* * * * ** *
396198 GCCTTT-ATAAAGGTTACCACCAACTCATATGAG
63 GCTTTTGA-AAAGGTTGCTAACAACTTGTGTG-G
* * * *
396231 CTTTTGAAAAGTTTGCCACCAACTCGTGTGGAC-ATTGAAAAGGTTGCCACCAACT-A-GTTTAG
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATG-TGA-
* * * *
396293 GCTTTTTAAAAGGTTAGC-ACCAACTCGTATGG
63 GCTTTTGAAAAGGTT-GCTAACAACTTGTGTGG
* * * * * * * *
396325 ACTTTAAAAAGGTTGTCACAAACTTGTGTTGG-ATTTGAAAAGGTTACC-CCAACTCGTGT-AGA
1 -CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* * *
396387 C-TTTGAAAAGGTTGCCATCAACTCGTGTGGG
64 CTTTTGAAAAGGTTGCTAACAACTTGTGT-GG
* * * * * * *
396418 CTTTTAAAAAGGCTGCCAACAACTTGTGTGGTCTTTTGAAAAGATTGCCACCAACTCACGTG-GA
1 C-TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAG-
* *
396482 C-TTTGAAATGGTTGC-CACTAACTTGTGTGGG
64 CTTTTGAAAAGGTTGCTAAC-AACTTGTGT-GG
* * * * *
396513 CTTGGAAAAGGTTGCCCCCAACTCATGTGGAC-TTTGAAAAAGTTGCCA
1 CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCA
396561 TTAACTCGTG
Statistics
Matches: 23847, Mismatches: 6466, Indels: 4240
0.69 0.19 0.12
Matches are distributed among these distances:
78 5 0.00
79 114 0.00
80 48 0.00
81 30 0.00
82 17 0.00
83 20 0.00
84 6 0.00
85 6 0.00
86 12 0.00
87 36 0.00
88 84 0.00
89 36 0.00
90 83 0.00
91 308 0.01
92 399 0.02
93 1349 0.06
94 5325 0.22
95 8968 0.38
96 3339 0.14
97 333 0.01
98 146 0.01
99 81 0.00
100 70 0.00
101 157 0.01
102 1260 0.05
103 1067 0.04
104 118 0.00
105 58 0.00
106 77 0.00
107 58 0.00
108 67 0.00
109 54 0.00
110 107 0.00
111 7 0.00
112 1 0.00
113 1 0.00
ACGTcount: A:0.28, C:0.19, G:0.22, T:0.31
Consensus pattern (94 bp):
CTTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCACCAACTCATGTGAGCT
TTTGAAAAGGTTGCTAACAACTTGTGTGG
Found at i:364417 original size:125 final size:125
Alignment explanation
Indices: 364067--364424 Score: 318
Period size: 125 Copynumber: 2.8 Consensus size: 125
364057 CGTGTGGGTT
* ** * * * * * **
364067 TTTGTAAAAGTTACCACCAACTCATGAGAGCTTTTAAAAAGGTTGCTAACAACT--TGTGTAGGC
1 TTTGAAAAAGTTGTCACCAACTCGTGTGAGCTTTCAAAAAGGTTGCGACCAACTCATGTG-AGAT
* * ** *
364130 TTTGAAAAGG-TTGCCACCAACTCGTGTGGACTTTTGAAAATGTTGCCAACAACTTGTGTGGAC
65 TTTG-AAAGGATTGCCACCAACTC--GTGAACTTTTGAAAAGGTTGCCAACAACTTGACTCGAC
* * *
364193 TTTGAAAAGGTTGTCACCAACTCGTGTGAGCTTTCAAAAAGGTTGCTACCAACTCATGTGGGATT
1 TTTGAAAAAGTTGTCACCAACTCGTGTGAGCTTTCAAAAAGGTTGCGACCAACTCATGTGAGATT
* * * *
364258 TTGAAAGGGTTGCCACCAACTTTGTGAGCTTTTGAAAAGGTTGCCAATAACTT-ACTCGAC
66 TTGAAAGGATTGCCACCAAC-TCGTGAACTTTTGAAAAGGTTGCCAACAACTTGACTCGAC
* * **
364318 TTTGAAAAAGTTGTCACCAACTCGTTTGGGCTTTTGAAAAGGTTGCGACCAACTC-TCGT-AGAC
1 TTTGAAAAAGTTGTCACCAACTCGTGTGAGCTTTCAAAAAGGTTGCGACCAACTCAT-GTGAGA-
* *
364381 TTTTGAACA-TATTGCCACCAACTCGTGCAAAC-TTTGAAATGGTT
64 TTTTGAA-AGGATTGCCACCAACTCGTG--AACTTTTGAAAAGGTT
364425 ACCTCCAACT
Statistics
Matches: 192, Mismatches: 31, Indels: 19
0.79 0.13 0.08
Matches are distributed among these distances:
124 7 0.04
125 84 0.44
126 80 0.42
127 16 0.08
128 5 0.03
ACGTcount: A:0.29, C:0.19, G:0.21, T:0.31
Consensus pattern (125 bp):
TTTGAAAAAGTTGTCACCAACTCGTGTGAGCTTTCAAAAAGGTTGCGACCAACTCATGTGAGATT
TTGAAAGGATTGCCACCAACTCGTGAACTTTTGAAAAGGTTGCCAACAACTTGACTCGAC
Found at i:365872 original size:30 final size:31
Alignment explanation
Indices: 365802--365920 Score: 114
Period size: 31 Copynumber: 3.8 Consensus size: 31
365792 AGCTTTTAGG
*
365802 CTTTTGAAAAGGTTGCCACCAACTCTTGTAGA
1 CTTTTG-AAAGGTTGCCACCAACTCTTATAGA
* * *
365834 CTTTTGAAAGGTTGGCATCAACTCTTATGGA
1 CTTTTGAAAGGTTGCCACCAACTCTTATAGA
* * * *
365865 C-TTTGAAATAGTTACCACCAACTCATGTAGA
1 CTTTTGAAA-GGTTGCCACCAACTCTTATAGA
* *
365896 GTTTTGAAAAGGTTGCTACCAACTC
1 CTTTTG-AAAGGTTGCCACCAACTC
365921 GTGTGGGGTT
Statistics
Matches: 69, Mismatches: 15, Indels: 6
0.77 0.17 0.07
Matches are distributed among these distances:
30 7 0.10
31 37 0.54
32 22 0.32
33 3 0.04
ACGTcount: A:0.29, C:0.20, G:0.18, T:0.32
Consensus pattern (31 bp):
CTTTTGAAAGGTTGCCACCAACTCTTATAGA
Done.