Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: Scaffold161
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 434478
ACGTcount: A:0.30, C:0.14, G:0.14, T:0.30
Warning! 56201 characters in sequence are not A, C, G, or T
File 4 of 4
Found at i:365883 original size:102 final size:103
Alignment explanation
Indices: 365698--365885 Score: 272
Period size: 102 Copynumber: 1.8 Consensus size: 103
365688 ACTCAGGTGC
* *
365698 GCTTTTGAAAAGGTTGCCAACAACTATTGTAGAATTTTAAAAAGGTTGTCACTAACTCGTGTGGA
1 GCTTTTGAAAAGGTTGCCAACAACTATTGTAGAATTTTAAAAAGGTTGGCACTAACTCGTATGGA
* *
365763 CTTTGAAATGGTTGCCACCAATTCGTGTGAGCTTTTAG
66 CTTTGAAATAGTTACCACCAATTCGTGTGAGCTTTTAG
* * * * *
365801 GCTTTTGAAAAGGTTGCCACCAACTCTTGTAGACTTTT-GAAAGGTTGGCA-TCAACTCTTATGG
1 GCTTTTGAAAAGGTTGCCAACAACTATTGTAGAATTTTAAAAAGGTTGGCACT-AACTCGTATGG
365864 ACTTTGAAATAGTTACCACCAA
65 ACTTTGAAATAGTTACCACCAA
365886 CTCATGTAGA
Statistics
Matches: 75, Mismatches: 9, Indels: 3
0.86 0.10 0.03
Matches are distributed among these distances:
101 1 0.01
102 39 0.52
103 35 0.47
ACGTcount: A:0.29, C:0.18, G:0.21, T:0.33
Consensus pattern (103 bp):
GCTTTTGAAAAGGTTGCCAACAACTATTGTAGAATTTTAAAAAGGTTGGCACTAACTCGTATGGA
CTTTGAAATAGTTACCACCAATTCGTGTGAGCTTTTAG
Found at i:366624 original size:71 final size:71
Alignment explanation
Indices: 366500--366636 Score: 159
Period size: 71 Copynumber: 1.9 Consensus size: 71
366490 TCTCGTAGAG
* ** * **
366500 TTTTGAAAATGTTGCCACCAACTCATGCAAACTCTGAAATGGTTGCCTCCAACTTGTGTGGGCTT
1 TTTTGAAAAGGTTGCCACCAACTCATGCAAACTCTGAAAAAGTTGCATCCAACTCATGTGGGCTT
366565 TTGGAC
66 TTGGAC
** * * *
366571 TTTTGAAAAGGTTGCCACCTTCTCATGTAGACTTTGAAAAAGTTGACAT-CAACTCATGTGGGCT
1 TTTTGAAAAGGTTGCCACCAACTCATGCAAACTCTGAAAAAGTTG-CATCCAACTCATGTGGGCT
366635 TT
65 TT
366637 AAAAAAAGCT
Statistics
Matches: 54, Mismatches: 11, Indels: 2
0.81 0.16 0.03
Matches are distributed among these distances:
71 52 0.96
72 2 0.04
ACGTcount: A:0.26, C:0.20, G:0.20, T:0.34
Consensus pattern (71 bp):
TTTTGAAAAGGTTGCCACCAACTCATGCAAACTCTGAAAAAGTTGCATCCAACTCATGTGGGCTT
TTGGAC
Found at i:370591 original size:167 final size:167
Alignment explanation
Indices: 370292--370608 Score: 399
Period size: 167 Copynumber: 1.9 Consensus size: 167
370282 TTGTTTGCGA
* * *
370292 TTTTGAAAAGGTTGCCACTAACTCGTGTGCGCTTTTGAAAAGGTTACCAACAACTTGTGTTGACT
1 TTTTGAAAAGGTTGCCACCAACTCGTGTGCACTATTGAAAAGGTTACCAACAACTTGTGTTGACT
* * * *
370357 TTCAAAAGGTGGTCACTAACTCTTGTGGGCTTTTGAAAAGCTTGCCACCAACTCTTGTAGACTTT
66 TTCAAAAGATGGTCACCAACTCGTGTGGGCTTTTGAAAAGCTTGCCACCAACTCTTATAGACTTT
370422 TGAAAAGGTTACCACCAACTCTTGTGGGCCTTTCGGC
131 TGAAAAGGTTACCACCAACTCTTGTGGGCCTTTCGGC
* * *
370459 TTTTGAAAAGGTTGCCACCAACTCGTGTGCAC-ATTGAAAAGGTTGCCATCAACTTGTG-TGAGT
1 TTTTGAAAAGGTTGCCACCAACTCGTGTGCACTATTGAAAAGGTTACCAACAACTTGTGTTGACT
* * *** *
370522 TTTAAAA-ATGGCTAACACCAACTCGTGTGGGCTTTTGAAAAGGTTGCTTTCAACT-TATATAGG
66 TTCAAAAGATGG-T--CACCAACTCGTGTGGGCTTTTGAAAAGCTTGCCACCAACTCT-TATAGA
* * *
370585 CTTTTGAAAATGTTGCCAGCAACT
127 CTTTTGAAAAGGTTACCACCAACT
370609 TGTTTGGACT
Statistics
Matches: 127, Mismatches: 19, Indels: 8
0.82 0.12 0.05
Matches are distributed among these distances:
164 3 0.02
165 11 0.09
166 24 0.19
167 89 0.70
ACGTcount: A:0.26, C:0.20, G:0.21, T:0.32
Consensus pattern (167 bp):
TTTTGAAAAGGTTGCCACCAACTCGTGTGCACTATTGAAAAGGTTACCAACAACTTGTGTTGACT
TTCAAAAGATGGTCACCAACTCGTGTGGGCTTTTGAAAAGCTTGCCACCAACTCTTATAGACTTT
TGAAAAGGTTACCACCAACTCTTGTGGGCCTTTCGGC
Found at i:371307 original size:102 final size:102
Alignment explanation
Indices: 371105--371299 Score: 248
Period size: 102 Copynumber: 1.9 Consensus size: 102
371095 ACTCGTGTAA
* * * ** *
371105 GCTTTTGAAACGGTTGCCACTAACTCTTGTAGACTTTTAAAAGGTTGCCACCAACTTGTGTCGGG
1 GCTTTTGAAAAGGTTGCCACCAACTCTTGTAGACTTTTAAAAGCTTGCCACCAACTCATGTCGGC
* * * *
371170 TTTGAAATGGTTGCTAACAATTTGTGTGGACTTTTGG
66 TTTGAAATAGTTGCCAACAACTCGTGTGGACTTTTGG
* * *
371207 GCTTTTGAAAAGGTTGCCACCAACTCTTGTGGACTTTTGAAAGCTTGCCATCAACTCATGT-GGA
1 GCTTTTGAAAAGGTTGCCACCAACTCTTGTAGACTTTTAAAAGCTTGCCACCAACTCATGTCGG-
*
371271 CTTTGAAATAGTTGCCACCAACTCGTGTG
65 CTTTGAAATAGTTGCCAACAACTCGTGTG
371300 TATTTTTGAA
Statistics
Matches: 78, Mismatches: 14, Indels: 2
0.83 0.15 0.02
Matches are distributed among these distances:
101 2 0.03
102 76 0.97
ACGTcount: A:0.24, C:0.19, G:0.23, T:0.34
Consensus pattern (102 bp):
GCTTTTGAAAAGGTTGCCACCAACTCTTGTAGACTTTTAAAAGCTTGCCACCAACTCATGTCGGC
TTTGAAATAGTTGCCAACAACTCGTGTGGACTTTTGG
Found at i:372680 original size:126 final size:125
Alignment explanation
Indices: 372472--396592 Score: 4889
Period size: 127 Copynumber: 189.6 Consensus size: 125
372462 TTTTGTAAAC
* * * ** * * * *
372472 TTTGAAAGGGTTACC-ACTAACTCGTGTGTGCTTTGAAAAGATTGCCCCCAATTCGTATGGGCTG
1 TTTGAAAAGGTTACCAAC-AACTCGTGTGGGCTTTGAAAAGGTTGCCAACAACTCGTGTGGACTT
* * * * *
372536 TGAAAAGGTTACCCCCAATTCATGTGGACTTTGAAAATGTTGCCATCAACTCGTGTGGGCT
65 TGAAAAGGTTGCCACCAATTCATGTGGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * *
372597 TATTGAAAAGGCTACCAACAACTCGTGTGGGCTTTCGAAAAGGTTGCCATCAACTCATATGGACT
1 T-TTGAAAAGGTTACCAACAACTCGTGTGGGCTTT-GAAAAGGTTGCCAACAACTCGTGTGGACT
* * * ** * * * **
372662 TTG-AAAGGTTGCCACCAATTCGTGTGGGCTTCT-GATTGGCTGCCATCAACTCGTGTAGATT
64 TTGAAAAGGTTGCCACCAATTCATGTGGACTT-TAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * * * * * *
372723 TTTAAAAAAGTTACCACCAACTCTTGTGGACTTTGACTATGG-TGCC-ACAAACTTGTGTGAACA
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTTGA-AAAGGTTGCCAAC-AACTCGTGTGGACT
* * * * * * *
372786 TTGAAAAAGTTGTCGCCAAATCGTGTGGTCTTTTAAAAAGGTTGCCACCAACTCATGTGGG-T
64 TTGAAAAGGTTGCCACCAATTCATGTGGAC-TTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
** * * * *
372848 TATTGGAAAA-GTTGTCACCAACTCATGTGGGCTTTTAAAAAGGTTGCTAACAACTCGTGTGG-C
1 T-TT-GAAAAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGTGGAC
* ** * * * * *
372911 TTTGAAATGGTTATCACCAACTCTTGTGGACTTTCAAAAAGGTTACCACCAATTCGTGTGGGCC
63 TTTGAAAAGGTTGCCACCAATTCATGTGGACTTT-AAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * * * *
372975 TTTGAAAAGGTTGCCATCAACTCGTGTAGGCTTTTAAAAGTGCTACCAACAACTTGTGTGGGCTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTTGAAAAG-GTTGCCAACAACTCGTGTGGAC-T
* * * *
373040 TTGAAAAGGTTGACACCAGCTT-ATATGGACTTTAAAAAGGTTGCCACCAATTCGTGTGGGCT
64 TTGAAAAGGTTGCCACCA-ATTCATGTGGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * * * * * * * *
373102 TTTGAAATGGTTACCATCAACTCATATAGACTTTTAAAAATGTTACCACCAACTCGTGTAGACTA
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGTGGACTT
* * * * * * * * * *
373167 CGACTATGG-TGCTACAAACTCGTGTGAACTTTAAAAAGGTTACCACCAACTCCTGTGGGCT
65 TGA-AAAGGTTGCCACCAATTCATGTGGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * ** *
373228 TTTAAAAAGATTACCACCAACACATGTAGGTTTTTGTAAAA-GTTGCC-ACTAACTTGTGT-GAG
1 TTTGAAAAGGTTACCAACAACTCGTGT-GGGCTTTG-AAAAGGTTGCCAAC-AACTCGTGTGGA-
* * * * *
373290 CTTTTAAAAAGGTTGCCAACAACTCGTGTAGG-CTTTGAAAAAGGTTGCCACCAACTCGTGTGGA
62 C-TTTGAAAAGGTTGCCACCAATTCATGT-GGACTTT-AAAAAGGTTGCCACCAACTCGTGTGGG
373354 CT
124 CT
* * * * * * **** * * ** *
373356 TTTGACAATGTTGCCACCAAGTCATGCAAACTTTGAAATGGTTGGCTCCAACTTGTGTGGGTTTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTTGAAAAGGTTGCCAACAAC-T-CGT--G----
* * * * * * ** *
373421 TGGACTTTTGAAAAGGTTACCA-CTATCTCGTGTGAACTTTGAAAAGGTTGACATTAAGTCGTGT
58 TGGAC-TTTGAAAAGGTTGCCACCAAT-TCATGTGGACTTTAAAAAGGTTGCCACCAACTCGTGT
373485 GGGCT
121 GGGCT
** * * * * ** * * * *
373490 TTAAAAAAAGTTGCGAGCAACTCGTGTCCGCTTTTGAAAAGGTTGCTACCAACTCATGTGGGCTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGTGGAC-T
* * * * **** *
373555 TTGAAAATGTTGCCACCAACTCGTGTGGACTTTGACTTTGTTGCCACCAA-TCTGTGTGGAC-
64 TTGAAAAGGTTGCCACCAATTCATGTGGACTTTAAAAAGGTTGCCACCAACTC-GTGTGGGCT
* * * *** * * * * *** * * *
373616 TTTGACTATGG-TGCTGCCAACTTGTATAGACTACAAAAAGGTTACCAGCAACTCGTGTGGGCTT
1 TTTGA-AAAGGTTACCAACAACTCGTGTGGGCTTTGAAAAGGTTGCCAACAACTCGTGTGGAC-T
** ** * ** * ** **
373680 TTGAAAATATT-ATACCCAATTCGTGTGGACTTTGACTATGG-TGCCATAAACTCGTGTGAAC-
64 TTGAAAAGGTTGCCA-CCAATTCATGTGGACTTT-AAAAAGGTTGCCACCAACTCGTGTGGGCT
* * ** * * *
373741 TTTGTAAAGGTTGCCTCCAACTTC-TGTGGGCTTTTGAAAAGGTTGCCAACAACTCATTTGGGCT
1 TTTGAAAAGGTTACCAACAAC-TCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGTGGACT
** * * * *
373805 TTGAAAATCCTTG-CACCAACTT-AGGTAGACTTTTGTAAAAGG-TGCCACCAACTCGTGTAGGC
64 TTGAAAA-GGTTGCCACCAA-TTCATGTGGAC-TTT-AAAAAGGTTGCCACCAACTCGTGTGGGC
373867 T
125 T
* * * * * * * ** * * *
373868 TTTGAAAAGATTACC-ACGAACTCATATGGGCCATCGAAAAAGATGTTACCAACTCATGTGGGAT
1 TTTGAAAAGGTTACCAAC-AACTCGTGTGGG-CTTTGAAAAGGTTGCCAACAACTCGTGT-GGAC
* * * * * *
373932 TTTGAAAAGGTAT--TACCAACTCAAGTGGGATTTTAAAAGGGTTGCCACCAACTCGTATGGGCT
63 TTTGAAAAGGT-TGCCACCAATTCATGT-GGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * ** * * * * *
373995 TTTGAAAAGGTTGCCAACAACTCATGTGGATTTTGAAAAGTTTGTCACCAACCCATGTGGGA-TT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTTGAAAAGGTTGCCAACAACTCGTGT-GGACTT
* * * * * * * * * * *
374059 CTGAAAAAGTTTCCAACAACTT-GTGTGTACTTTGAAAAGGTTGTCACCAACAC-TATGTGTT
65 -TGAAAAGGTTGCCACCAA-TTCATGTGGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * ** * * * *
374120 TTTGAAAAGATTGCTACCAACTCATGTGTGATTTTGAAAAGGTTGTCACCAATTCGTGTGGGCTT
1 TTTGAAAAGGTTACCAACAACTCGTGTG-GGCTTTGAAAAGGTTGCCAACAACTCGTGTGGAC-T
** * * * * *** * * * ***
374185 TTGAAAAGGTTGCCAATAATTTATGTTGACTTTGAAAAGTTTATTACTAACTTGCGACAGCT
64 TTGAAAAGGTTGCCACCAATTCATGTGGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * *
374247 TTTAAAAAGGTTTGCCACCAACTC-TCGTAGACTTTTGAAACGGTTGCC-ACTAACTCATGTGGG
1 TTTGAAAAGG-TTACCAACAACTCGT-GTGGGC-TTTGAAAAGGTTGCCAAC-AACTC--GT--G
* * * * * *
374310 CTTTTGGGCTTTTAAAAAGGTTGTCACTAA--CATGTGTGGATTTTGAAAAA-GTTGCCATCAA-
58 ----TGGAC-TTTGAAAAGGTTGCCACCAATTCA--TGTGGACTTT-AAAAAGGTTGCCACCAAC
374371 TGCGTGTGGGC-
115 T-CGTGTGGGCT
* * * * * * * * * *
374382 TTT-AATTAAGGCTGCTACCAACTCGTGTGAGCTTTTGAAATGGTTCCCATCAA-TCATGTGGGC
1 TTTGAA--AAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGTGGAC
* ** * * ** * ** * ***
374445 TTTTGAAAATGTTGCCACTTACTCGTGTGGACTTTGACTATGG-TGCCACCAACTTTTATAAAC-
63 -TTTGAAAAGGTTGCCACCAATTCATGTGGACTTT-AAAAAGGTTGCCACCAACTCGTGTGGGCT
* * *
374508 TTTGAAAAGGTTGCCACCAACTAGTGTGAACTTCTGAAACTGTTGGGCTTTGAATATGGTGCC-A
1 TTTGAAAAGGTT---ACCAAC-------AAC-TC-G----TG-TGGGCTTTGAAAAGGTTGCCAA
* * * * * * *
374572 CAAACTCGTGTGAACTTTAAAAAGGTTACCACCAACTCAAGTGGGCTTTTAAAAAGGTTGCTACC
49 C-AACTCGTGTGGACTTTGAAAAGGTTGCCACCAATTCATGTGGAC-TTTAAAAAGGTTGCCACC
* **
374637 AACTCGTATGGATT
112 AACTCGTGTGGGCT
* ** * * * * * * *
374651 TTTCAAAATATTACCACCAACTTGCGTGGGCCTTTGAAAA-GTTGCTACCAACTCATGTAGGATT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGG-CTTTGAAAAGGTTGCCAACAACTCGTGT-GGACT
* *** * * * * ** ** *
374715 TTAAAAATACTGCCACCAACTCGTGTGGGATTTTGAAAAGGTTATCACCAACTTTTATGGGCT
64 TTGAAAAGGTTGCCACCAATTCATGT-GGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
*** * * * * * *
374778 TTTGAAAAGGTTGTTAACAACTTGTGTGGACTTTGAAAAGGTTGTCACCAACTCGGGTGGGCTTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTTGAAAAGGTTGCCAACAACTCGTGTGGAC-TT
* * * * * * * *
374843 TGAAAAGGTTACCACCGATT-ATTGTAGAATTTTAAAAAGGTTGCCACTAACTCGTCTAGAC-
65 TGAAAAGGTTGCCACCAATTCA-TGT-GGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * * *
374904 TTT-AAAATGATT-GCTACTAATTTGTGTGGGCTTTTAGGCTTTTGAAAAGGTTGTCACCAACTC
1 TTTGAAAA-GGTTACCAAC-AACTCGTGT--G------GGC-TTTGAAAAGGTTGCCAACAACTC
* * * * * * * * *
374967 TTGTGGACTTTTGAAAATGTTACCACCAACTT-ACGCGAGATTTTAAAAAAGTTGTCACCAGCTC
55 GTGTGGAC-TTTGAAAAGGTTGCCACCAA-TTCATGTG-GACTTTAAAAAGGTTGCCACCAACTC
**
375031 GTGTGGAAT
117 GTGTGGGCT
* * * * * * * * *
375040 TTTTAAAAAGTTGCAAACAACTTGTGTGGACTTTTG-AAAGGTTACC-ACAAACTCATGTAGGCC
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAAC-AACTCGTGT-GGAC
* * * ** * * * * * *** *
375103 TTTGAAAATGTTTCTACCAACACGTGTGGGATTTTGAAAAGGTTACCACCAACTCTTGCAAGAT
63 TTTGAAAAGGTTGCCACCAATTCATGT-GGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* ** * * * ** * *
375167 TTTGAAAAAGTTGTCACCAACTCGTTTGGGCTTTTGAAAAGATTGTTACCAACTCGTGTGGGCTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGTGGAC-T
* * * *** * *
375232 TTGAAAAGGTTACCACCAACTCTTACAGACTTTTCAAAAGGTTGCCACCAACTCGTGTGGAC-
64 TTGAAAAGGTTGCCACCAATTCATGTGGAC-TTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * *** * * * *
375294 ATTGAAATA-GTTGCTTCCAACTCTTGTGGGCTTTTGAAAAGGTTGCCACCAACTCTTGTAGACT
1 TTTGAAA-AGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGTGGAC-
* ** * * * *
375358 TTTG-AAAGGTTGCC-CCTAACTGGTGTGGACTTTGAAATGGTTGCCACCAACTCGTGTAGGCA
63 TTTGAAAAGGTTGCCACC-AATTCATGTGGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * * * * * **
375420 TTTAAAAAGGTTACCACCAACACGTATAGGCTTTTGAAAAGGTTACTACCAACTCATGTACACTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGTGGACTT
* * * ** * * * * * *
375485 TGACTATGG-TGCCACAAACCCATGTGAACTTTGAAAAGGTTACCACCAACTCTTGTAGGTT
65 TGA-AAAGGTTGCCACCAATTCATGTGGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * *
375546 TTTAAAAAGGTTACCACCAATTTGTGTGGGTTTTTGTAAAA-GTTGCCAGCAACTCGTGT-GAGC
1 TTTGAAAAGGTTACCAACAACTCGTGTGGG-CTTTG-AAAAGGTTGCCAACAACTCGTGTGGA-C
* * * * * ** * * *
375609 TTTTAAAAAGGTTACCACCAACTCGTGTGGACTTTTGAAAATATTGCCAACAACTGGTGTGGAC-
63 -TTTGAAAAGGTTGCCACCAATTCATGTGGAC-TTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * ** * * * * * * * *
375673 TTTCAAAAGGATGTCACCAACTTGTATGAGCTTTTGAAAAGGTTGCTATCAACTCATGTGGAATT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGTGG-ACT
* * * * * ** *
375738 TTGAAAAGATTGTCACCAA--CTTG-GAAGAGCTTTTGAAAAGGTTGCCAACAACTTATGT-GGA
64 TTGAAAAGGTTGCCACCAATTCATGTG--GA-C-TTTAAAAAGGTTGCCACCAACTCGTGTGGGC
375799 T
125 T
** ** * * * *
375800 TTTGAAAAGGTTGTC-ACTAACTCGTGTGGGCTTTTGAAAAGGTTGTGACCAGCTC-TCATAGAC
1 TTTGAAAAGGTTACCAAC-AACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGT-GTGGAC
* * * * ***
375863 TTTTGAAAAGGTTGCCACCAACTCATGTGCACTTTTAAAAAGGTTGCCAACAACTTGTGTTAAC-
63 -TTTGAAAAGGTTGCCACCAATTCATGTGGAC-TTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
** * * **
375927 TTTGAAAAGGTTGTC-ACTAACTCGTGTGGGCTTTTGAAAAGGTTACCACCAACTC-TCGTAAAC
1 TTTGAAAAGGTTACCAAC-AACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGT-GTGGAC
* * * *
375990 TTTTAAAAAGGTTACCACCAACTCTAATGGGCCTTTCGG-CTTTTGAAAAGGTTGCCACCAACTC
63 -TTTGAAAAGGTTGCCACCAA-T-TCAT--G----T-GGAC-TTTAAAAAGGTTGCCACCAACTC
**
376054 GTGTGCAC-
117 GTGTGGGCT
* * * * * ** * *
376062 ATTGAAAATGTTGCCATCAACTTGTGTGGGCTTTTGAAAAGGTTGCCTTCAACTCATGTGGGCTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGTGGAC-T
* * ** * * * * ** * * *
376127 TTGAAAATGTTGCCACCAACTT-GTGTGGACTTTGACTATGG-TACCACAAATTTTTATAGAC-
64 TTGAAAAGGTTGCCACCAA-TTCATGTGGACTTT-AAAAAGGTTGCCACCAACTCGTGTGGGCT
* * ** * *
376188 TTTGAAAAGGTTGCCACCAACT-GTGTGAACTTCTAAAAATGTTAGACTTTGACTATGATACAAA
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTT-TGAAAA-G---G---TTG-C---CA-AC-AA
** * * * **
376252 CTCGTGTAAACTTTGAAAAGGTTGCCACCAACTCAAGCGAGGTTTTAAAAA-GTTAGCCACCAAC
52 CTCGTGTGGACTTTGAAAAGGTTGCCACCAATTCATGTG-GACTTTAAAAAGGTT-GCCACCAAC
* **
376316 TCG-GATTGATT
115 TCGTG-TGGGCT
* * * ** * * * * * *
376327 TTTAAAAAGGTTATCACCAACTTATGTGGGCTTTCAAAAAAGTTGCTACCAATTCGTGTGAGATT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTT-GAAAAGGTTGCCAACAACTCGTGTG-GACT
* * * * * * * *
376392 TTGAAAAGGTTACCACCAACTCGTGTGGGATTTTGAAAAGGTTGCCACCAACTCATATGGACT
64 TTGAAAAGGTTGCCACCAATTCATGT-GGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * * *
376455 TTTGAAAAAGTTGCCAACAACTAGTGTGGACTTTGAAAAAGTTGTC-ACTAACTCGTGT-AAGCT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTTGAAAAGGTTGCCAAC-AACTCGTGTGGA-C-
* * * * *
376518 TTTGCAACGGTTGCCACCAATTCTTGTAGACTTTTGAAAAGGTTGCCACCAACTCGTGTAGGG--
63 TTTGAAAAGGTTGCCACCAATTCATGTGGAC-TTTAAAAAGGTTGCCACCAACTCGTGT-GGGCT
* * * * *
376581 TTTGAAATGGTTGCCAACAATTCGTGTGGGCTTTTGGGCTTTTGAAAAGGTTGCCATCAACTCTT
1 TTTGAAAAGGTTACCAACAACTC--GT--G----TGGGC-TTTGAAAAGGTTGCCAACAACTCGT
* * * * * * *
376646 GTGGACTTTTG-AAACGTTGCCATCAACTCATGTGGACTTTGAAATA-GTTACAACCAACTTGTG
57 GTGGAC-TTTGAAAAGGTTGCCACCAATTCATGTGGACTTT-AAAAAGGTTGCCACCAACTCGTG
**
376709 TGGATT
120 TGGGCT
* * * *** * * *
376715 TTTAAAAAGGTTACCACCAACTTGTGTGAATTTTTGAAAAGGTTGCCATCAACTCCTGTCGACTT
1 TTTGAAAAGGTTACCAACAACTCGTGTG-GGCTTTGAAAAGGTTGCCAACAACTCGTGTGGAC-T
* * * * * * * * * * *
376780 TTGAAAAGGTTACCAACAACTCGTTTGGGCTTTGAAAAA-GTTTCCACCAACTCATGCGGCCA
64 TTGAAAAGGTTGCCACCAATTCATGTGGACTTT-AAAAAGGTTGCCACCAACTCGTGTGGGCT
* *** * * * * * * *
376842 TTTGCAAACCATAGCACCAACTCGTATAGGCTTTTGAAAAGGTTG-CTACTAACTCATGTGGGAT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAAC-AACTCGTGT-GGAC
* * * * * * * *
376906 TTTG-AAAGTTTGCCACAAACTCGTGTTGAATTTTGAAAAGGTTGCCACCAACTCATGTGGGCT
63 TTTGAAAAGGTTGCCACCAATTCATG-TGGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* ** * * * * * * *
376969 TTTGAAAAGGTTGCCAACAACTTTTGTGGACTTTGAAAAGGCTACTACCAACTCATGTAGGCCTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTTGAAAAGGTTGCCAACAACTCGTGT-GGACTT
* * ** * * * *
377034 TGAAAAGGTTGCCATCAACTCATGTGAGTTTTTGAGAATGTTGCCACCAACTCGTGTGGAC-
65 TGAAAAGGTTGCCACCAATTCATGTG-GACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
** * * * * ** * * * * ** *
377095 TTCCACTATGG-TGCCACCAACTTTTATAGACTTTGAAAAGGTTGCCACCAACTTATGT-AAGCT
1 TTTGA-AAAGGTTACCAACAACTCGTGTGGGCTTTGAAAAGGTTGCCAACAACTCGTGTGGA-CT
* * * * **
377158 TCTGAAAA---TG----C---T-A----GACTTTAACTATGG-TGCCACAAACTTGTGTGAAC-
64 T-TGAAAAGGTTGCCACCAATTCATGTGGACTTTAA-AAAGGTTGCCACCAACTCGTGTGGGCT
* * * * ** * * *
377205 TTTGAAAAAGTTACC-ACAAACTGGTGTAGGATTTGAAAAGGTTGCCCCCAATTCGTGCGGGCTT
1 TTTGAAAAGGTTACCAAC-AACTCGTGTGGGCTTTGAAAAGGTTGCCAACAACTCGTGTGGACTT
* * * * * * * *
377269 TGAAAAGGTTGCC-CTCAACTCATTTGGGCTTTGAAAAGGTTACCATCAACTAGTGT-AGCAT
65 TGAAAAGGTTGCCAC-CAATTCATGTGGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGC-T
* * * * * * *
377330 TTTAAAAAGGCTACCAACAACTTGTGTGGGCTTTTGAAAAGGTTGCCACCAATTCATATGGACTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGTGGACTT
* * * ** * * * *
377395 TCAAAAGGTTGCCACTAACTCGGGTGGGCTTTTAAAAAGGTTGCCACCAACTCGTATAGACT
65 TGAAAAGGTTGCCACCAATTCATGTGGAC-TTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * * * * * *
377457 TTTGAAAATGTTACCACCAACTCATGTGGACTTTGACTATGG-TGTC-ACAAACTTGTGTGAACC
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTTGA-AAAGGTTGCCAAC-AACTCGTGTGGACT
** * * * *
377520 TTGAAAAGGTTGCTGCCAACTCGTGTGGGCTTTTAAAAAGGTTCCCA-CAACTCGTGTGGG-T
64 TTGAAAAGGTTGCCACCAATTCATGTGGAC-TTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * * **
377581 TTTAAAAAGGTTGCCACCAACTCATATGGGCTTTTGAAAAGATTGCCAACAACTCG-CAGGAGCT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGTGGA-CT
* * * * * * *
377645 TTGAAAAGGTTGCCACCAACTCGTGTGGCCTTTTGAAAAGGATACCACCAACTCGTTTGGGCT
64 TTGAAAAGGTTGCCACCAATTCATGTGGAC-TTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * ** * * * *
377708 TTTGAAAAGGTT-CCTACCAACTCATGCAGGATTTTG-AAA---TGCCATCAACTCATGTCAGAT
1 TTTGAAAAGGTTACC-AACAACTCGTG-TGGGCTTTGAAAAGGTTGCCAACAACTCGTGT-GGAC
* ** * * * * * * * * * *
377768 TTTGAAAAAGTTTTCTCCAACTCTTCTGGGCTTTTATAAATGTTGCCAACAACTTGTGTGGAC-
63 TTTGAAAAGGTTGCCACCAATTCATGTGGAC-TTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * *
377831 TTTGAAAAGGTTACCACCAACTCGTGTGAGCTTCTGAAAATGTT----A-GACT--T-T-GAC--
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTT-TGAAAAGGTTGCCAACAACTCGTGTGGACTT
* ** * * * * * *
377885 T---ATGG-TGCCATAAACTCATGTGAACTTTGAAAAGGTTGCCCCCAATTTGTGTGGGC-
65 TGAAAAGGTTGCCACCAATTCATGTGGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * * *
377941 TTTGAAAAGGTTGCC-CCTAACTCATGTGGACTTTGAAAAGGTTGCCATCAACTCATGTGGGCTT
1 TTTGAAAAGGTTACCAAC-AACTCGTGTGGGCTTTGAAAAGGTTGCCAACAACTCGTGTGGACTT
* ** ** * * * * * * * * *
378005 TTAAAA--AAGCTTCCAATAGCACGTGCAGTCTTTTGAAAAGGTTGCCATCAAGTCATATGGAC-
65 TGAAAAGGTTGCCACCAAT-TCATGTG--GAC-TTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * * *
378067 TTTAAAAAGGTTGCCACCAATTCGTGTGGGCTTTTGAAATGGTTG-CAATCAACTTGTGTAGACT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAA-CAACTCGTGTGGAC-
* * * * * * ** * * * * **
378131 TTTTAAAATGTTACCACTAACTCTTGTGGACTTTGACTATGG-TGCCACAAACTTGTGCGAAC-
63 TTTGAAAAGGTTGCCACCAATTCATGTGGACTTT-AAAAAGGTTGCCACCAACTCGTGTGGGCT
* ** ** * * * * **
378193 TTTGAAAAAGTTGTCGCCAAATCGTGTGGGCTTTTAAAAAGGTTGCCACCAACTCTTGTGGGTTG
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGTGGACT-
* * * * * * **
378258 TTGAAAAAGTTGCCACCAACTCTTGTGGGCTTTCAAAAAGGTTGCCAACAACTCATG-CAGC-
64 TTGAAAAGGTTGCCACCAATTCATGTGGACTTT-AAAAAGGTTGCCACCAACTCGTGTGGGCT
** * * * * * * * * *
378319 TTTGAAAAGGTTTTCACCGACTAGTGTGGACTTTTGAAAATGTTACCACCAACTCGTATGGGCCT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGT-GGACT
* * * ** * *
378384 TTGAAAAGATTGCCCCCAATTCATGTGGACTTTGAAAAGGTTATCATCAACTCGTGTGGACT
64 TTGAAAAGGTTGCCACCAATTCATGTGGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * * * * * *
378446 TTTAAAAAGGCTACCGACAATTTGTGTGGGCTTTTGAAAAGGTTACCACCAACTCATATGAACTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGTGGACTT
* * * * * * * * ***
378511 TAAAAAGGTTGCCACTAATTCTTGTGGGCTTTTGAAATGGTTGCCATCAACTCCTGTCAACT
65 TGAAAAGGTTGCCACCAATTCATGTGGAC-TTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * * * * *
378573 TTTAAAAACGTTACC-ACTAACTTGTGTAGACTTTGATTATGG-TACC-ACAAACTCGTGTGAAC
1 TTTGAAAAGGTTACCAAC-AACTCGTGTGGGCTTTGA-AAAGGTTGCCAAC-AACTCGTGTGGAC
* * * * ** *
378635 TTTGAAAAGGTTACCACTAACTCGA-GTGGGCTTTTAAAAAGGTTATCACCAACTCGTGTGGGTT
63 TTTGAAAAGGTTGCCACCAATTC-ATGTGGAC-TTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * *
378699 TTTGTAAAA-GTTGCCAACAACTTGTGTGAGCTTTTAAAATGGTTGCCAACAACTTGTGTGGACT
1 TTTG-AAAAGGTTACCAACAACTCGTGTGGGCTTTGAAAA-GGTTGCCAACAACTCGTGTGGACT
* * * ** * * *
378763 TTGAAAAGGTTGCCACCAACTCGTGTGGACTTTTGAAAATATTGCCAACAACTTGTGTGGAC-
64 TTGAAAAGGTTGCCACCAATTCATGTGGAC-TTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * * * * * *
378825 TTTGAAATA-GTTGCCACCAACTCATGTAGAGTTTTGAAAAGGTTGCTACCAACTCATATGGATT
1 TTTGAAA-AGGTTACCAACAACTCGTGT-GGGCTTTGAAAAGGTTGCCAACAACTCGTGTGGA-C
* * * * * *
378889 TTTGAAAAGGTTGCCACCAACTCGTGTGGACTTTTTATAAGGTTGCCAACAACTCGCGTGGGC-
63 TTTGAAAAGGTTGCCACCAATTCATGTGGAC-TTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * ** * ** * * *
378952 TTTGAAAAGGTTGCCACCAACTTGTGTGAACTATTGAAAAAGTTATC-ACAAACTCATATAGGCC
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCT-TTGAAAAGGTTGCCAAC-AACTCGTGT-GGAC
* * * * ** * * *
379016 TTTGAAAAGGTTGCTACCAA--CATGTATGTGATTTTGAAAAGGTTACCACCAACTAATGCGAGA
63 TTTGAAAAGGTTGCCACCAATTCATG--TG-GACTTTAAAAAGGTTGCCACCAACTCGTGTGGGC
379079 T
125 T
* * * * * *
379080 ATTGAAAAAGTTATCACCAACTCGTGTGGGCTTTTGAAAAGGTTGCCAACAACTTGTGTAGACTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGTGGACTT
** * * ** * * * * *
379145 TGAAAAGGTTGTTACCAACTCGTGTGGACTTTTGTAAAGGTTACTACCAACTCTTGTAGACT
65 TGAAAAGGTTGCCACCAATTCATGTGGAC-TTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * *
379207 TTTCAAAAGGTTACCACCAACTCATGT-GGATATTGAAATA-GTAACTTCCAAC-TCTTATGGGC
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCT-TTGAAA-AGGT---TGCCAACAAC---T---C
* * * * * * * ** * *
379269 TTTTGGGCTTTTGAAAAGGCTGCCACCAACTCTTGTAGACTTTTGAAAGGTTGCCATCAACTCAT
55 GTGTGGAC-TTTGAAAAGGTTGCCACCAATTCATGTGGACTTTAAAAAGGTTGCCACCAACTCGT
*
379334 GTGGAC-
119 GTGGGCT
* * * * * * * * * * **
379340 TTTCAAATGGTTGCCACCAACTCATGTGGGCTTTTGAAAAAGTTACCACCAGCACGTGTAGGTTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGT-GGACT
* * * * * * ** * ** * **
379405 TTGAAAAAGTTACTACCAACTC-TATAGACTTTGACTATGG-TGCTGCAAACTCGTGTGAAC-
64 TTGAAAAGGTTGCCACCAATTCATGTGGACTTT-AAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * * * * *
379465 TTTGAAAAGATTACCAATAACTCCTATGGGCTTTTACAAAGGTTACCACCAACTCAT-TTGACTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTTGA-AAAGGTTGCCAACAACTCGTGTGGAC--
* * * * * * **
379529 TTTGTAAAA-GTTACCACCAACTCGTGTGGGCTTTTAAAAAGGTTGCCAACAACTCATGCAGGC-
63 TTTG-AAAAGGTTGCCACCAATTCATGTGGAC-TTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * * *
379592 TTTGCAAAGGTTGCCACCAACTCATGTGGACTTTTGAAAATGTTGCCAACAACTTGTGTGGACTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGTGGACTT
* * ** * * * * *
379657 TGAAAAGGTTGTCACC-ATCTCCT-TTAAGCTTTTGAAAAGGTTGCTACCAACTCATGTAGGAT
65 TGAAAAGGTTGCCACCAAT-TCATGTGGA-C-TTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * **
379719 TTTGAAAAGGTTGCCACCAACTTGTGTGAGCTTTTGAAAAGGTTGCTAACAACTTATGTGGAC-T
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGTGGACTT
* * * * * * * *
379783 TAAAAAGGTTGTCACCAATTCATGTGGATTTTTCAAAAGGTTGCGACCAATTC-TCGTAGACT
65 TGAAAAGGTTGCCACCAATTCATGTGGA-CTTTAAAAAGGTTGCCACCAACTCGT-GTGGGCT
* * * * * * *
379845 TTTGAAAAGGTTGCTACCAACTCGTGTGGGCTTTTGGGCTTTTGAAAGGTTGCTATCAACTCATG
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGC-TTT--G-----AAAAGGTTGCCAACAACTCGTG
* * * * * * * * * *
379910 TGGACTTTGGAATGATTACCACCAACTCGTGTGGGCCTTTTAAAAGGTTACCACCAACTCGTGTA
58 TGGACTTTGAAAAGGTTGCCACCAATTCATGT-GGACTTTAAAAAGGTTGCCACCAACTCGTGTG
*
379975 GAC-
122 GGCT
* * * * * * **
379978 TTTGAAAAGGTTGCCACCAACTCGTGTAGG-TAATTGAAAAAGTTACCACCAACTCACGTAGG-C
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCT--TTGAAAAGGTTGCCAACAACTCGTGT-GGAC
* * * * * * * * ** * *
380041 TTTTAAAAATGTTGACAACAACTCGTGTGG-CTTTGAGAAGGTTATCACCAACTCGTATGGACT
63 -TTTGAAAAGGTTGCCACCAATTCATGTGGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * ** ** *
380104 TCTT-AAAAGGTTACCACCAACTCGTGT-GGCTTTTGAAAAGGCTG-TTACGAACTTATATGGGA
1 T-TTGAAAAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAAC-AACTCGTGT-GGA
* * * * * * ** *
380166 -TATTAAAAATGTTGCCATCAACTCATGTGAGATTTTGAAAAGGTTGCTGCTAACTCGTGTGGGC
62 CT-TTGAAAAGGTTGCCACCAATTCATGTG-GACTTTAAAAAGGTTGCCACCAACTCGTGTGGGC
380230 T
125 T
* * * * * * * * * * *
380231 TTTGACAAA-GTTGCTACCAACTCTTATAGACTTTTGAAAAAGTTGCCATCAACTCTTGTGGGCT
1 TTTGA-AAAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGTGGACT
* * * * * * * ** *
380295 TTGAAATGGTTACCACAAATTTGTGTGGGCTTTTGGACTATTGAAAAGGTTGCTACCAACTTTTA
64 TTGAAAAGGTTGCCACCAA----T-T---CATGTGGACT-TTAAAAAGGTTGCCACCAACTCGTG
** *
380360 CAGACT
120 TGGGCT
* * ** * * ** * * * *
380366 TTTG-AAAGGTTGCTATTAATTCATGTGCACTTTGAAATA-GTTGCCACCAACTTGTGTGAATTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTTGAAA-AGGTTGCCAACAACTCGTGTGGA-CT
* ** * * * * * * *
380429 TTTAAAAGGTT-CTTGCCAACTCGTCTGGATTTTTGAAAAGGTTGCCACCAACTCCTGTCGGCT
64 TTGAAAAGGTTGC-CACCAATTCATGTGGA-CTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * * * **
380492 TTTGAAAAGGTTGCCAACAACTCATTTGGGCTTTGAAAAAGTTGTCACCAACTTGTGTGCCCATT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTTGAAAAGGTTGCCAACAACTCGTGTGGAC-TT
* * * * * * ** *
380557 TGCAAAGCTTACCACCAA--CGTGTGTAGGCTTTTAAAAAGGTTGCTACCAACTCGTGCAGGAT
65 TGAAAAGGTTGCCACCAATTCATGTG--GAC-TTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
*** * * * * * *
380619 TTTG-AAAGGTCGTCACCAACTCATGTGAGCTTTTAAAAAGGTTGCCAATAACTCGTGTGGGCTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGTGGACTT
* * * * ** * * * *
380683 TGAAAAGGTTGCTACCAACTCGTGTGAACTTTTGGAAAGGTTCCCACCAACTCATGTCGGCC
65 TGAAAAGGTTGCCACCAATTCATGTGGAC-TTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * * * * * * *
380745 TTTGAAAAGGTTGCTACCAACTCATGTGAGCTTTTGAAATGATTGCCACCAACTCTTCTAGACTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGTGGAC-T
* * * * * * *
380810 TTGAAAAGGTTGCCACCAACTCGTGTGGACTTTGAAATGGTTTCCACTAATTCGTGTGGGCTTTT
64 TTGAAAAGGTTGCCACCAATTCATGTGGACTTTAAAAAGGTTGCCACCAACTC--GT--G----T
380875 GGGCT
121 GGGCT
* * * * * * ** *
380880 TTTGAAAAAGTTGCCACCAACTCTTGTGGACTTTTG-AAAGGTTGGCATTAACTAGTGTGGACTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGTGGACTT
* ** * * * * * *
380944 TGAAATA-GTTAG-CACTAACACGTGTAGATTTTTCAAAAGGTTGCCACCAACTCCTGTGAGCT
65 TGAAA-AGGTT-GCCACCAATTCATGTGGA-CTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * * * * *
381006 CTTGAAGAGGTTGCCACCAACTCGTGTGGACTTTTGCAAAGGTTGCC-ACTAACCCAT-TGGGCT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAAC-AACTCGTGTGGAC-
* * * * * * * * * * * *
381069 TTTGAAATGGTTACCACCAACTCGTGTGAGCCTTT-CAAATGTTACTACCTACTCGTGTAGGAT
63 TTTGAAAAGGTTGCCACCAATTCATGTG-GACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
** * * * * * * **
381132 TTTG---AGCG--A-C--CGGCTCGAGTGGGATTTTGGAAAGGTTACCACCAACTTGTGTGGGTT
1 TTTGAAAAG-GTTACCAACAACTCGTGTGGG-CTTTGAAAAGGTTGCCAACAACTCGTGT-GGAC
* * * * ** * *
381189 TTTGAAAAGGTTGCCAACAAGTT-GTGTGGACATTGAAAAA-GTTGTCATTAACTTGTGTGGACT
63 TTTGAAAAGGTTGCCACCAA-TTCATGTGGAC-TTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * * **
381252 TTTGAAAAAGTTTCTAATAACTTGTGTGGAG-TTTGAAAAGGTTGTC-ACTAACTC-TGTGGTTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGG-GCTTTGAAAAGGTTGCCAAC-AACTCGTGTGGACT
* * * * * * * **
381314 TTGAAAAGGTTGCTACCAACTCGTATGT-GATTTTGAAAAGATTACTACCAACTTATGTGGGCT
64 TTGAAAAGGTTGCCACCAATTC--ATGTGGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * ** * * ** *
381377 TTTGAAAAGGTTGCTAACAACTTATGTTGACTTTGAAAAGGTTG-TTACTAACTCGTGTGGGCTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTTGAAAAGGTTGCCAAC-AACTCGTGTGGAC--
* * * * * ** *
381441 TTTAAAGAAAAGGTTGCCAACTACTT-GTGTAGACTTTGAAAAGGTTGTTACCAACTCATGTGGG
63 TTT---GAAAAGGTTGCC-ACCAATTCATGTGGACTTTAAAAAGGTTGCCACCAACTCGTGTGGG
381505 CT
124 CT
* * * * * * * *
381507 TTTGAAAAGGTTGTCC--CTAACTCTTGTAGACTTTTCAAAAGGATGCCACCAACTCGTATGGAC
1 TTTGAAAAGGTT-ACCAAC-AACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGTGGAC
* * * * * * * * *
381570 ATTGAAATAGTTACTTCCAACTC-TTGTGGGCTTTTGGGCTTTTGAAAAGGTTGCCACCAACTCT
63 TTTGAAA-AGGT--TGCC-AC-CAAT-T---CATGTGGAC-TTTAAAAAGGTTGCCACCAACTCG
***
381634 TGTAAACT
118 TGTGGGCT
* * * * * * * *
381642 TTTG-AAAGGTTGCCATCAACTCGTGTAGACTTTGACATGGTTGCC-GCAAACTCATGTAGG-CT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTTGAAAAGGTTGCCAAC-AACTCGTGT-GGAC-
* * *** * * * * * *
381704 TTTGAAAAGGTTGCTACTAGCACATGTACG-CTTTTGAAAAA-GTTACTACCAACTCCTGTAGAC
63 TTTGAAAAGGTTGCCACCAATTCATGT-GGAC-TTT-AAAAAGGTTGCCACCAACTCGTGTGGGC
381767 -
125 T
* * * ** * * *
381767 TTTGACTATGG-TGCC-ACAAACTCGTGTGAACTTTGAAAAGGTTACC-ACTAACTCATGTGGGC
1 TTTGA-AAAGGTTACCAAC-AACTCGTGTGGGCTTTGAAAAGGTTGCCAAC-AACTCGTGTGGAC
* * * * ** * * * ***
381829 TTTTAAAAAGGTTACCACCAACTCGTGTGGGTTTCTGTAAAA-GTTACCACCAACTCATGTGAAA
63 -TTTGAAAAGGTTGCCACCAATTCATGTGGACTT-T-AAAAAGGTTGCCACCAACTCGTGTGGGC
381893 T
125 T
* * * * *
381894 TTT-AAAATGGTTGCCAACAACTCGTGTAGGCATTGAAAAGGTTGCCACCAATTCGTGTGGACTT
1 TTTGAAAA-GGTTACCAACAACTCGTGTGGGCTTTGAAAAGGTTGCCAACAACTCGTGTGGACTT
* * * * * * * ** * *
381958 CTAAAAATGTTGCCAACAACTT-GTGCGGACTTTGAAAGGGTTGTTAGCAACTCGTGTGAGCT
65 -TGAAAAGGTTGCCACCAA-TTCATGTGGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * * * * * *
382020 TTTGAAGAGGTTGCTACCAACTCATGTGGGATTTTGAAAAGGTTACCACCATCTTGTGT-GAGCT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGG-CTTTGAAAAGGTTGCCAACAACTCGTGTGGA-C-
* ** * * * * * *
382084 TTTGGAGTGGTTGCCAACAACTT-ATGTGGATTTTGAAAAGGTTGTCACCAACTCATGTGAGCT
63 TTTGAAAAGGTTGCCACCAA-TTCATGTGGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * * *
382147 TTTGAAAAGGTTGCGACCAACTC-TCGT----TTTGAAAAGGTTACCACCATCTTGTGT-GAGCT
1 TTTGAAAAGGTTACCAACAACTCGT-GTGGGCTTTGAAAAGGTTGCCAACAACTCGTGTGGA-C-
* ** * * * * * *
382206 TTTGGAGTGGTTGCCAACAACTT-ATGTGGATTTTGAAAAGGTTGCCACCATCTCATGTGGAC-
63 TTTGAAAAGGTTGCCACCAA-TTCATGTGGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
** ** * ** * *
382268 TTTGAAAAGGTTGA-CATTAACTTATGTGGGCTTTAAAAAGAGCAG-CGACAAACTCGTGTCTG-
1 TTTGAAAAGGTT-ACCAACAACTCGTGTGGGCTTTGAAAAG-GTTGCCAAC-AACTCGTGT-GGA
* * * * * * *
382330 CTTTTGAAAAGGTTGCTACCAATTCATGTCGTCTTTTGAAAATGTTACCACCAACTCGTGTGGAC
62 C-TTTGAAAAGGTTGCCACCAATTCATGTGGAC-TTTAAAAAGGTTGCCACCAACTCGTGTGGGC
382395 -
125 T
***** * * * * * * * * * * *
382395 TTTGACTTTATTGCCACCAACTTGTCTGGACTTTGACTATGGTACCGCC-AC-ACTTGTATAGAC
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTTGA-AAAGGT--TGCCAACAACTCGTGTGGAC
* * * * * * * * ** * * *
382458 TTTAAAAAGATTACCAGCAACTCGTGTGGGCTTTTGAAAATATT-ACATCCAACTCGTGTAGAC-
63 TTTGAAAAGGTTGCCACCAATTCATGTGGAC-TTTAAAAAGGTTGCCA-CCAACTCGTGTGGGCT
* * * * ** * * * *
382521 TTTGACTATGG-TGCTATA-AACTCGTGTGAACTTTGTAAAGGTTGCCACCAACTCCTGTGGGCT
1 TTTGA-AAAGGTTACCA-ACAACTCGTGTGGGCTTTGAAAAGGTTGCCAACAACTCGTGTGGAC-
* * * * * * ** * * **
382584 TTTGAAAAGGTTACCAACAACTCGTTTGGGCTTTGAAAATCG-TGCCACCAACACATGTGCACT
63 TTTGAAAAGGTTGCCACCAATTCATGTGGACTTT-AAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * ** * *
382647 TTTGCAAAAGG-TGCCACCAACTCGTGTGCGCTTTTGAAAAGGTTACCACCAACTTATCTGAGAT
1 TTTG-AAAAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGTG-GAC
* * * * * * * *
382711 TTTGAAAAGG-TGCTACCAACTCGA-GTGAGATTTTAAAAGGGTTGTCACAAACTTGTGTGAGCT
63 TTTGAAAAGGTTGCCACCAATTC-ATGTG-GACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * ** * * * * *
382774 TTTGAAAAGGTTGCGAACAACTTGTATGGATTTTGAAAAAGTTGTCATCAACCCGTGTGGGCTTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTTGAAAAGGTTGCCAACAACTCGTGTGGAC-TT
* * * * * * *
382839 TGAAAAAGTTTCCAGCAACTT-GTGTGGACTTTGAAAAA-GTTGTCACCAACAC-TGTGGGTT
65 TGAAAAGGTTGCCACCAA-TTCATGTGGACTTT-AAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * *** * *
382899 TTTGAAAAGATTGCTACCAACTCATGTGCTATTTTGAAAAGGTTGCCACCAACTCGTGTAGACCT
1 TTTGAAAAGGTTACCAACAACTCGTGTG-GGCTTTGAAAAGGTTGCCAACAACTCGTGTGGA-CT
* * * * ** * * ***
382964 TCG-AAAGGTTGCCAACAACTT-ATGTTGACTTTGAAAAGGTTGTTACTAACTCGCGACAGCT
64 TTGAAAAGGTTGCCACCAA-TTCATGTGGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
*** *
383025 TTTGAAAAGGTTACTGCCAACTCGTGTAGGCTTTTAGGCTTTTGAGAAGGTTGCC-ACTAACAT-
1 TTTGAAAAGGTTACCAACAACTCGTGT--G------GGC-TTTGAAAAGGTTGCCAAC-AAC-TC
** ** * * * * *
383088 GTGTGGACTTTGAAAAGGTTGCCATTAAGACGTGTGGGCTTTAAATAAGGCTGCTACCAACTCAT
55 GTGTGGACTTTGAAAAGGTTGCCACCAATTCATGTGGACTTTAAA-AAGGTTGCCACCAACTCGT
383153 GTGGGCT
119 GTGGGCT
* * * * * * ** * **
383160 TTTGAAAATGTTGCC-ACTAACTCGTGTGGACTTTGACTATGG-TGCCACCAACTTTTATAAACT
1 TTTGAAAAGGTTACCAAC-AACTCGTGTGGGCTTTGA-AAAGGTTGCCAACAACTCGTGTGGACT
** * ** *
383223 TCAAAAAGGATGCCATCCAACTAGTGTGAGCTTTTGAAAATGTTGGACTTTGACTATGG-TGCCA
64 TTGAAAAGGTTGCCA-CC-A--A-T-T---C--------ATG-TGGACTTT-AAAAAGGTTGCCA
* * *
383287 CAAACGCGTGTGAAG--
110 CCAACTCGTGTG-GGCT
* * * * ** * * *
383302 TTTGAAAAGATTACCACCAACCCATGAAGGCTTTTAAAAAGGTTGCCAACAACTCGTGTAGAATT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGT-GGACT
* * * * * * * * * * ** *
383367 TTGAAAATGTTACAACCAACTCATGTGGGCCTTTGAAATGGTTGCTACCAATTCGTTTAAGAT
64 TTGAAAAGGTTGCCACCAATTCATGT-GGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * * * * *
383430 TTTGAAAAAGTTACCACCAACTCATGTGGGATTTTGAAAAGGTTACCACCAACTCATTTGGGCTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGG-CTTTGAAAAGGTTGCCAACAACTCGTGTGGAC-T
* * * * *
383495 TTGAAAATGTTGCCAAC-A---ATGTTGACTTTGAAAAA-GTTGTCACCAACTCGGGTGGGCT
64 TTGAAAAGGTTGCCACCAATTCATGTGGACTTT-AAAAAGGTTGCCACCAACTCGTGTGGGCT
* * ** ** * * *
383553 TTTGAAAAGGTTGCCACCAACTATTGTGGAATTCTAAAAAGGTTACC-ACTAACTCGTGTAGACT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTT-TGAAAAGGTTGCCAAC-AACTCGTGTGGACT
* * * * *
383617 TTGAAATGGTTGTCACCAATTCGTGTGGGTTTTCAGGCTTTTGAAAAGGTTGCCACCAACTCTTG
64 TTGAAAAGGTTGCCACCAATTCATGT-GG-----A--C-TTTAAAAAGGTTGCCACCAACTCGTG
*
383682 TGGAC-
120 TGGGCT
** ** * *** * * ** *
383687 TTTG-AAAGGTTGTCGTCAACTCTTACAGACTTTGAAATA-GTTGCC-ACTAACTCATGTACAGT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTTGAAA-AGGTTGCCAAC-AACTCGTGTGGA-C
* * * ** * * * *
383749 TTTGAAAAGGTTGCTACCAACTCGTGTGGGTTTTTGAAAAGGTTGCTACCAACTCATGTGGACT
63 TTTGAAAAGGTTGCCACCAATTCATGT-GGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * ** * *
383813 TTTTATAAGGTTGCCAACAACTCACGTGGGCTTCGAAAAGGTTGCCACCAACTCGTGTGGACTAT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTTGAAAAGGTTGCCAACAACTCGTGTGGACT-T
** ** * * * * * * * * *
383878 TGAAAAGGTTATCATAAACTCGTGGAGGCCTTTGAAAAGGTTGCTACCAACAT-GTATGTGAT
65 TGAAAAGGTTGCCACCAATTCAT-GTGGACTTTAAAAAGGTTGCCACCAAC-TCGTGTGGGCT
* * * * ** * ** * *
383940 TTTGAAAAGGTTACC-TCTAATTCATGCGAGATTTTGAAAAAGTTATCACCAACTTGTGT-GAGC
1 TTTGAAAAGGTTACCAAC-AACTCGTGTG-GGCTTTGAAAAGGTTGCCAACAACTCGTGTGGA-C
* * * * * ***
384003 TTTTAAAAAGGTTGCCAACAACTT-GTGTAGACTTTGAAAAGGTTATTACCAACTCGTGTGGGCT
63 -TTTGAAAAGGTTGCCACCAA-TTCATGTGGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * * * * * *
384067 TTTGAAAAGGTTACTACCAACTCTTGTAGACTTTTCAAAAGGTTGCCACCAACTCATGTAGACAT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGTGGACTT
* ** * * * * *
384132 TGAAATA-GTGGCTTCCAACTTTTATGGGCTTTTGGGCTTTTAAAACGGATGCCACCAACTCTTG
65 TGAAA-AGGTTGCCACCAA--TTCAT--G----TGGAC-TTTAAAAAGGTTGCCACCAACTCGTG
* *
384196 TAGACT
120 TGGGCT
* * ** * * * * *
384202 TTTG-AAAGGTTGCCATCAACTTATGTGGACATTCAAATGGTTGCC-ACTAACTCGTGTGGGCTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTTGAAAAGGTTGCCAAC-AACTCGTGTGGAC-T
* * ** * * * * * *
384265 TTGAAAAGGTTACCATCAACACGTGTAGG-CTTTTGAAAAA-GTTACTACCAACTCATGTAGAC-
64 TTGAAAAGGTTGCCACCAATTCATGT-GGAC-TTT-AAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * ** * * ** * * *
384327 TTTGACTATGG-TGCC-ACAAACCCGTGTGAACATTGAAAAGGTTACCAGTAACTCCTATGGGCT
1 TTTGA-AAAGGTTACCAAC-AACTCGTGTGGGCTTTGAAAAGGTTGCCAACAACTCGTGTGGACT
* * * * * *
384390 TTTAAAATGGTTACCACTAACTT-GTGTGG-CTTTTTGTAAAA-GTTGCCACCAACTCGTGTGAG
64 TTGAAAA-GGTTGCCACCAA-TTCATGTGGAC--TTT-AAAAAGGTTGCCACCAACTCGTGTGGG
384452 CT
124 CT
* * * * *
384454 TTTAAAAAGGTTGCCAACAACTCGTGTAGGCTTTGAAAAGGTTGCCACCAACTCATGTGGACTTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTTGAAAAGGTTGCCAACAACTCGTGTGGAC-TT
* * * * * *
384519 TGAAAATGTTGCCAACAACTT-ATGTGGACTTTGAAAAGGTTGTCACCAACTCCTGTGAGCT
65 TGAAAAGGTTGCCACCAA-TTCATGTGGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * ** * *
384580 TTTGAAAAGGTTGCTACCAACTCATGTGGATTTTGAAAAGGTTGCC-ACTAACTTGTAT-GAGCT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTTGAAAAGGTTGCCAAC-AACTCGTGTGGA-C-
* ** * *
384643 TTTGGAAAGGTTGCCAATAACTT-ATGTGGACTTTAAAAAGGTTGTCATCAACTCGTGTGGGCT
63 TTTGAAAAGGTTGCCACCAA-TTCATGTGGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
*** * * * * * * * *
384706 TTTGAAAAGGTTGTGACCAACT-TTCATAGACTTTTGAAAAGGTTACCACCAACCCGTGTAGG-C
1 TTTGAAAAGGTTACCAACAACTCGT-GTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGT-GGAC
* * * * * * * * * *
384769 TTTTGGGCTTTTGAAAGGTTGCTATCAACTCGTGTAGACTTTGAAATGATTACCACCAACTCGTG
63 -TTT--G-----AAAAGGTTGCCACCAATTCATGTGGACTTTAAAAAGGTTGCCACCAACTCGTG
*
384834 TCGGCCT
120 T-GGGCT
*** * *
384841 TTT-AAAAGGTTACC-ACTAACTCGTGTACACTTTAAAAAGGTTGCCACCAACTCGTGTAGGTA-
1 TTTGAAAAGGTTACCAAC-AACTCGTGTGGGCTTTGAAAAGGTTGCCAACAACTCGTGT-GG-AC
* * * * * * * * *
384903 GTTGAAAAAGTTTCCACCAACTCACGCAGG-CTTTTGAAAAGGTTGACAACAACTCGTGT-GGC-
63 TTTGAAAAGGTTGCCACCAATTCATG-TGGAC-TTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * * * ** * *
384965 TTTGAAAATGTTATCACCAACTCATATGGACTTCTGAAAAGGTTACCGCCAACTCATGTGGGCCT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTT-TGAAAAGGTTGCCAACAACTCGTGT-GGACT
* * * * * * * * * *
385030 TTGAAAAGGTTGCTACCAACTCATATGGGATTTTAAAAATGTTGCCATCTACTCATGTGAGAT
64 TTGAAAAGGTTGCCACCAATTCATGT-GGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * * * **
385093 TTTGAAAAGGTTGGTCC--TAACTCGCGTGGGCTTTTGAAAAAGTTGCTACCAACTCTTGAAGAC
1 TTTGAAAAGGTT--ACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGTGGAC
* * ** * * * * * * * * *
385156 TTTTAAAAAAGTTATCATCAACTCGTGTGGGCTTTGAAATGGTTACCACCAATTTGTGTGGGCTT
63 -TTTGAAAAGGTTGCCACCAATTCATGTGGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGC--
385221 TT
125 -T
* * ** *** * * *
385223 GGGCTATTGAAAAGGTTGCCACCAACTTTTACAGACTTTTG-AAAGGTTGCTATCAACTCGTGTG
1 ----T-TTGAAAAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGTG
* * * * * * *
385287 GACTTTGAAATA-GTTACCACCAACTCGTGTGAATTTTTGAAAAGGTTCCCACCAACTCGTGTGG
60 GACTTTGAAA-AGGTTGCCACCAATTCATGTGGA-CTTTAAAAAGGTTGCCACCAACTCGTGTGG
**
385351 ATT
123 GCT
* * * * * * * * *
385354 TTTGAAAAGGTAACCACCAACTCCTATTGGGTTTTGAAAAGGTTGCCAATAACTCATTTGGGCTT
1 TTTGAAAAGGTTACCAACAACTCGT-GTGGGCTTTGAAAAGGTTGCCAACAACTCGTGTGGACTT
* * * * * *
385419 TGGAAAA-GTTGCCACCAACTT-GTGTGGCCATTTACAAAGCTTACCACCAACTCGTGTAGGCT
65 T-GAAAAGGTTGCCACCAA-TTCATGTGGAC-TTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * ** ** * *
385481 TTTGAAAAGGTTGCTACCAACTTGTGTAGGATTTTG-AAAGGTTGTTACCAACTCATGTAGG-CT
1 TTTGAAAAGGTTACCAACAACTCGTGT-GGGCTTTGAAAAGGTTGCCAACAACTCGTGT-GGAC-
* * * * * * * * *
385544 TTTGAAAAAGTTGCCAACAACTCGTGTGGGCTTTGAAAATGTTGCTACCAACTCGTGTGGACT
63 TTTGAAAAGGTTGCCACCAATTCATGTGGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * * *
385607 TTTGAAAAGATTCCCACCGACTCATGTGGGCCTTTGAAAAGGTTG-CTACTAACTCGTAT-GAGC
1 TTTGAAAAGGTTACCAACAACTCGTGTGGG-CTTTGAAAAGGTTGCCAAC-AACTCGTGTGGA-C
* * * * * * * *
385670 TTTTGAAATGATTGCCACCAACTCTTCTAGACTTTTGAAAAGGTTGCCACCAACTCGTGTGGACT
63 -TTTGAAAAGGTTGCCACCAATTCATGTGGAC-TTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * * * *
385735 TTGGCAAAGGTTGCCACCAACTCATGTGGGCTTTTGAAATA-GTTACCACCAACTCGTGTGGGCC
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGC-TTTGAAA-AGGTTGCCAACAACTCGTGT-GGAC
* * * * * * * * *
385799 TTTG-AAAGGTTGCTACCAACTCGTGTCAGATTTTGAAAAGGTTGCGACCAACTCGAGTGGGAT
63 TTTGAAAAGGTTGCCACCAATTCATGT-GGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * * * ** *
385862 TTTGGAATGGTTGCCACCAACTTGTGTGGGTTTTTGAAAAGGTTGCCAACAAGTTATGT-GAGCA
1 TTTGAAAAGGTTACCAACAACTCGTGTGGG-CTTTGAAAAGGTTGCCAACAACTCGTGTGGA-CT
* * ** * *** * * **
385926 TTGGAAAGGTTGTCATTAACTCATGTGGACTTTTGAAAAA-GTTTTTAACAACTTGTGTAAAG--
64 TTGAAAAGGTTGCCACCAATTCATGTGGAC-TTT-AAAAAGGTTGCCACCAACTCGTGT-GGGCT
** * * ** * * *
385988 TTTGAAAAGGTTGTCACCAACTC-TATGGTTTTTGAAAAGGTTGCTACCAACTCGTGTGTGATTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTTGAAAAGGTTGCCAACAACTCGTGTG-GACTT
* * * * * * * ** * *
386052 TGAAAAGGTTACTACCAACTCATGTGGGCTTTTGAAAAGGTTGCTAACAACTTATGTTGAC-
65 TGAAAAGGTTGCCACCAATTCATGTGGAC-TTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
** * * * *
386113 TTTGAAAAGGTTA-TTACTAACTCATGTGGGCTTTTTAAAAAAAGGTTGCCAACAACTTGTGTAG
1 TTTGAAAAGGTTACCAAC-AACTCGTGTGGGC--TTT--GAAAAGGTTGCCAACAACTCGTGTGG
** * * * * * * * * *
386177 ACTTTGAAAAGGTTGTTACCAACTCGTGTGGGCTTTTGAAAAGGTGGACC-CTAACTCTTGTAGA
61 ACTTTGAAAAGGTTGCCACCAATTCATGTGGAC-TTTAAAAAGGTTG-CCACCAACTCGTGTGGG
386241 CT
124 CT
* * * * * * * ***
386243 TTTCAAAAGGTTGCCACCAACTCGTATGGACATT-AAAATAGTTGCTTCCAACTCTTGTGGGCTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTTGAAAA-GGTTGCCAACAACTC--GT--G---
* * * * ** * *
386307 TTGGGCTTTTGAAAAGGTTGCCACCAACTCTTGTAGACTTTTGAAAGGTTGTCATCAACTCGTGT
58 -TGGAC-TTTGAAAAGGTTGCCACCAATTCATGTGGACTTTAAAAAGGTTGCCACCAACTCGTGT
*
386372 GGAC-
121 GGGCT
* ** * * * * * *
386376 TTTGAAATGGTTGTCACCAACTCGTGT-GGCTTTTGAAAAGGTTACTAGCAGCAT-ATGTAGG-C
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAAC-TCGTGT-GGAC
* * * * * * ** * * **
386438 TTTTAAAAAAGTTACTACCAACTT-GTGTAGACTTTGACTATGG-TGCCACAAACTCGTGTGAAC
63 -TTTGAAAAGGTTGCCACCAA-TTCATGTGGACTTT-AAAAAGGTTGCCACCAACTCGTGTGGGC
386501 -
125 T
* * * * * * * *
386501 TTGGAAAAGGTTACC-ACTAACTCATGCGAGCTTTTAAAAAGGTTACCACCAACTCGTGTGAGAT
1 TTTGAAAAGGTTACCAAC-AACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGTG-GAC
* * * * * * * * * * *
386565 TTTAAAAAGGTTGCCAACAACTCGTGTAGG-CATTGAAAAGATTACCACCAACTTGTGTAGGCA
63 TTTGAAAAGGTTGCCACCAATTCATGT-GGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * ** * * * * * *
386628 TCTGAAAATGTTGCAAACAACTTATGTGGACTTTGAAATGGTTACCACCAACTTGTGTGGGCCTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTTGAAAAGGTTGCCAACAACTCGTGT-GGACTT
* * * * * * * * * * *
386693 TG-AAAGGTTGCTACCAACTCGTGTCAGATTTTGAAAAGGTTGCGACCAACTTGAGTAGGAT
65 TGAAAAGGTTGCCACCAATTCATGT-GGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* ** * ** * * * * *
386754 TTTGGAAAGGTTGTCACCAACTC-TGTGGTTTTTGAAAAAGTTGCTACCAACTCATGTGTGATTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTTGAAAAGGTTGCCAACAACTCGTGTG-GACTT
* * * * * * ** * *
386818 TGAAAAAGTTACTACCAACTCTTGTAGACTTTTGAAAGGTTGCCATCAACTCGTGTGGAC-
65 TGAAAAGGTTGCCACCAATTCATGTGGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * * * **
386878 TTTGAAATGGTTGCCACCAACTCGTGTAGGCTTTTGAAAAGGTTACTACCAACAAGTGTAGG-CT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGT-GGAC-
* * * * * * * * ** * **
386942 TTTGAAAAAGTTACTATCAACTCGTATAGACTTTGACTATGG-TGCCA-CAACCTCGTGTGAAC-
63 TTTGAAAAGGTTGCCACCAATTCATGTGGACTTT-AAAAAGGTTGCCACCAA-CTCGTGTGGGCT
* * * * * **
387004 TTTGAAAAGGTAACC-ACTAACTCCTGTGGGCTTTTAAAAAGGTTACCACCAACTCGTGTGGGTT
1 TTTGAAAAGGTTACCAAC-AACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGTGGACT
* * * * * * ** * * * * *
387068 TCTCCAAAA-GTTACCGCTAACTCGTGTGAGA---T--AAAGGTTGCTGCTAACTCATCTTGACT
64 T-T-GAAAAGGTTGCCACCAATTCATGTG-GACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * ** * * * * * * *
387127 TTTGAAAAGTTTGCCACCAACTATTGTAGACTTTTGAAAAAGTTACCACCAACTCATGTGGGCTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGTGGACTT
* * ** * ** **
387192 TGAAATGGTTGCTACCAATTTGTGTGGACTTTTGGGCTATTAAAATGGTTGCCAGCAACTTTTAC
65 TGAAAAGGTTGCCACCAATTCATGTGGAC--TT----TA--AAAA-GGTTGCCACCAACTCGTGT
**
387257 GGATT
121 GGGCT
* * * * * * * * * * * *
387262 TTTG-AAAGGTTGCTATCAACACGTGTGGACTTT-AAAATAGTTTCCACCAACACATGTGAATTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTTGAAAA-GGTTGCCAACAACTCGTGTGGA-CT
* * * * * * * * **
387325 TTGAAAAAGTTGCCACCAACTCGTGTAGATTTTTGAAAAGGTTGCCACCATCTCCTGTCAGCT
64 TTGAAAAGGTTGCCACCAATTCATGTGGA-CTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * *
387388 TTTGAAAAGGTTACCAACAACTCATTTGGGCTTTGAAAAAGTTGCCACCAACTTGTGTGGCCATT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTTGAAAAGGTTGCCAACAACTCGTGTGGAC-TT
* * ** * * * * * * *
387453 TGCAAAGCTTAACACCAACTCGTGCAGG-CTTTTAAAAAGGTTGCTACCAACTCATGTAGGAT
65 TGAAAAGGTTGCCACCAATTCATG-TGGAC-TTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* ** * * ** *
387515 TTTG-AAAGGATGTCACCAACTCATGT-GGCTTTTGAAAAGGTTGCCAACAACTTTTGTGGGCTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGTGGACTT
* * * * * * * *
387578 TGAAAAGGTTGCTACCAACT-AGTGTGGACTTTTGAAAAGGTTCCCACTAACTCATGTGGACC
65 TGAAAAGGTTGCCACCAATTCA-TGTGGAC-TTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * * * *
387640 TTTGAAAAGGTTGCTACCAACTCGCGTGAGCTTTGGAAAAGGTTTCCAAAAACTTGTGTGGACTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTT-GAAAAGGTTGCCAACAACTCGTGTGGACTT
* * * * * * * *
387705 TGAAAAGGTTGCCACCAACTCGTGTGTGATTTTGAAAAGTTTTCCACCAACTCATGTGGGAT
65 TGAAAAGGTTGCCACCAATTCATGTG-GACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * * *
387767 TTTGAAAAGGTTACCACCAACTCATATGGGCCTTTGAAAAGGTTGCTACCAACTCATGTGGGATT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGG-CTTTGAAAAGGTTGCCAACAACTCGTGT-GGACT
* * * * * * * * * *
387832 TTGAAATA-GTTGCCACCAACTCTTCTAGACTTTTGAAAAGGTTGTCACCAACCCATATGGAC-
64 TTGAAA-AGGTTGCCACCAATTCATGTGGAC-TTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* ** * * *
387894 TTTGAAATGGTTGTC-ACTAATTCGTGTGGGCTTTTGGGCTTTTGAAAAGGTTGCCACCAACTCT
1 TTTGAAAAGGTTACCAAC-AACTC--GT--G----TGGGC-TTTGAAAAGGTTGCCAACAACTCG
* * ** * * * * * * *
387958 TGTGAACTTTTG-AAAGGTTGGCATTAACTCGTGTGGACTTT-TATA-GTTACCACTAACTTGTG
56 TGTGGAC-TTTGAAAAGGTTGCCACCAATTCATGTGGACTTTAAAAAGGTTGCCACCAACTCGTG
**
388020 TGGAAT
120 TGGGCT
** * * * * * * * * *
388026 TTTGAAAAGGTTGTCACCGACTCCTATGAGCTCTTGAAAAGGTTGTCACCAACTCATGTGGCCTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCT-TTGAAAAGGTTGCCAACAACTCGTGTGGAC-T
* * * * * *
388091 TTGCAAAGGTTGCCACCAACTCATGTGGGCTTTTGAAATGGTTACCACCAACTCGTGTGGG-T
64 TTGAAAAGGTTGCCACCAATTCATGTGGAC-TTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
*** * * ** * * * * * *
388153 CTTTG-AAAGGTTGTTACCAACTCGTGTCAGATTTTGAAAAGGTTACGACCAAATCGAGTGGGAT
1 -TTTGAAAAGGTTACCAACAACTCGTGT-GGGCTTTGAAAAGGTTGCCAACAACTCGTGT-GGAC
* * * * * * *
388217 TTTGGACAA-GTTGCCACCAACTT-GTGTGGGATTTTAAAAAAGCTGCCACCAACTTGTGTGGAC
63 TTT-GAAAAGGTTGCCACCAA-TTCATGT-GGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGC
388280 -
125 T
* ** * * * * * *
388280 GTTGAAAAGGTTGTC-ACTAACTCGTGTGGACTTTTGAAAAAGCTT-CTAACAACTTGTGTAGAG
1 TTTGAAAAGGTTACCAAC-AACTCGTGTGGGC-TTTG-AAAAGGTTGCCAACAACTCGTGTGGAC
* * * * * * * * *
388343 TTTGAAAAGTTTGTCACCAACTC-TATGG-TTTTGACAAAGGTTGCTACCAACTCGTGTGTGAT
63 TTTGAAAAGGTTGCCACCAATTCATGTGGACTTT-AAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * *
388405 TTTGAAAAGGTTACCACCAACTCGTGTGGGATTTTGAAAAGGTTGCTAACAACTTGTGTGGACTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGG-CTTTGAAAAGGTTGCCAACAACTCGTGTGGACTT
* * * * * * * * * * *
388470 TGAAAAGGTTGTCACCAACTCGTCTAGG-CTTTTGAAAAGGTTGCCACCAATTCTTCTAGACC
65 TGAAAAGGTTGCCACCAATTCATGT-GGAC-TTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * *
388532 TTTGAAAAGGTTGCCACCAACTC-TGTGGACTTTGAAATGGTTGCCACCAATTCGTAGGGGCTTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTTGAAAAGGTTGCCAACAACTCGT----G----
* * * * ** ** * ** *
388596 TGGGCTTTTGAAAAAGTTGCCACCAACTCGTGTGGACTTTTGAACTGTTGGCATGAACTCGTGTA
58 TGGAC-TTTGAAAAGGTTGCCACCAATTCATGTGGACTTTAAAAAGGTTGCCACCAACTCGTGTG
*
388661 GAC-
122 GGCT
* ** *
388664 TTTGAAATA-GTTACCACCAACTCGTGTGGATTTTTGAAAAGGTTGCCACCAACTCGTGTGGACT
1 TTTGAAA-AGGTTACCAACAACTCGTGTGG-GCTTTGAAAAGGTTGCCAACAACTCGTGTGGACT
** * * * ** * ** *
388728 TTGACTAGGGTGCCACAAACTCGGGTGAACTTTGTAAAGGTTGCCACCAACTCCTGTGGGCT
64 TTGAAAAGGTTGCCACCAATTCATGTGGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * * * * * *
388790 CTTGGAAAGGTTGCCACCAACTCCTGTGGACTTTTGCAAAGGTTGCCACCAACTCATGTGGGCTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGTGGAC-T
* * * * * * * * * ** *
388855 TTGAAATGGTTACTACCAACTCGTGTGGGCCTTTGAAAAGGTTGCTACCAACTCATGTTAGAT
64 TTGAAAAGGTTGCCACCAATTCATGT-GGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
** * * * * * * *
388918 TTTGAAAAGAG-CGCCACCAACTC------G-ATTAAAAAGGTTGCCACCAATTTGTGT-AAGCT
1 TTTGAAAAG-GTTACCAACAACTCGTGTGGGCTTTGAAAAGGTTGCCAACAACTCGTGTGGA-C-
* * * * * * * * *
388974 TTTGAAAAAGTTTCCAACAACTT-GTGTGGACTTTGAAGAGGTTGTCACCAACTC-TATGGGTT
63 TTTGAAAAGGTTGCCACCAA-TTCATGTGGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * ** * * * *
389036 TTTGAAAAGGTT-GCAACCAACTCATGTGCGATTTTCAAAAGGTTACCACCAACTCGTGTGGGCT
1 TTTGAAAAGGTTACCAA-CAACTCGTGTG-GGCTTTGAAAAGGTTGCCAACAACTCGTGTGGAC-
* * * * *** * * *
389100 TTTGAAAAGGTTGCCAACAA--CGTGTGTTGACTTTGAAAATGTTATTACTAACTCATGTAGGCT
63 TTTGAAAAGGTTGCCACCAATTCATGTG--GACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * *
389163 TTTGAAAAGCTTGCTACCAACTCGTGTGGGCTTTTGGGCTTTTAAAAAGGTTGTCACCAACTCGT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGC-TTT--G------AAAAGGTTGCCAACAACTCGT
* * * * * * *
389228 GTGAACTTTAAAAAGGTTGCCATCAACTCATGTGGGCTTTAAAAAAGGCTGCCACCAAATCGTGT
57 GTGGACTTTGAAAAGGTTGCCACCAATTCATGTGGACTTT-AAAAAGGTTGCCACCAACTCGTGT
389293 GGGCT
121 GGGCT
* * * * * * *
389298 TTTGAAAACGTTGCCATCAACTCATGTGGACTTTGAAAAGGTTGCCACCAA--C-T-T--A-TGT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTTGAAAAGGTTGCCAACAACTCGTGTGGACTTT
* * * * * * * *
389356 G--AA-CTT-CTA--AA--AATGTTGGACTTTGAAAAGGTTGCCAACAAATTGTGT-GGAT
66 GAAAAGGTTGCCACCAATTCATG-TGGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * * * * * * * *
389408 TTTGAAAAGTTTTCTATCAACTCATGTGGGATTTTGAAAAGTTTGCTACCAACTCATATGAGATT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGG-CTTTGAAAAGGTTGCCAACAACTCGTGTG-GACT
* * * * * * * *
389473 TTGAAAAGGTTACCACCAACTCGTGTGGCCTTTTGAAAAA-GTTGCCAACAACTTGTATGGAC-
64 TTGAAAAGGTTGCCACCAATTCATGTGGAC-TTT-AAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * ** ** *
389535 TTTGAAAAGGTTGCTAGCAACTCGTGTGGACTTTGAAAAGGTTGCCATGAACTTTTGTAGACTTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTTGAAAAGGTTGCCAACAACTCGTGTGGAC-TT
* * * * * * * * * *
389600 TGAAAAAGTTACCGCCAATTCGTGTGAACTTTGAAATGGTTACCACCAATTCATGTGAGCTTTTA
65 TGAAAAGGTTGCCACCAATTCATGTGGACTTTAAAAAGGTTGCCACCAACTC--GT--G----TG
389665 GGCT
122 GGCT
* * * * * * * * ** *
389669 TTTGAAAAGTTTGCCACCAACTCTTGCGGACTTTTG-AAGGGTTGCTATTAACTTGTGTGGACTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGTGGACTT
* * * *
389733 TGAAATA-GTTGCCCTTAACAATT--T-TGGGCTTTTTAAAAGGTTGCCACCAACTCATGTGGGC
65 TGAAA-AGGTTG-CC--ACCAATTCATGTGGAC-TTTAAAAAGGTTGCCACCAACTCGTGTGGGC
389794 -
125 T
** * * *** * * *
389794 TTTGAAAAGGTTACCCCCAACTTGTGTGGACTTTGAAAAGGTTGCTTTCAACCCTTGTGGGCATT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTTGAAAAGGTTGCCAACAACTCGTGTGGAC-TT
* * * * * * ** * *
389859 TAAAAAGGCTACCAACAACT-A-GTACAGG-CTTTTGAAAAA-ATTGCCACCAACTTATGCGGAC
65 TGAAAAGGTTGCCACCAATTCATGT---GGAC-TTT-AAAAAGGTTGCCACCAACTCGTGTGGGC
389920 -
125 T
* * * * * *
389920 TTTGAAATGGTTTCC-ACTAACTTGTATGGGCTTTGAAAAGGTTGCCACCAACTCATGTGGACTT
1 TTTGAAAAGGTTACCAAC-AACTCGTGTGGGCTTTGAAAAGGTTGCCAACAACTCGTGTGGACTT
* * * * *
389984 TGAAAAGGTTGCCATCAACTCATGTGTG-CTTTTAAAAAGGTTGCTACCATCTCATGT-GGCT
65 TGAAAAGGTTGCCACCAATTCATGTG-GAC-TTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * ** *
390045 TTTGAAAATGTTACCAATAACTCGTGTGGGCTTTCGAAAATGTTGCC-ACAAACTCGTGTAAAAT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTT-GAAAAGGTTGCCAAC-AACTCGTGTGGACT
* * * * **
390109 TTGAAAAAGGTTTCCACCAACTCATCTGCG-CTTTTAAAAAGGATGCCACCAACTCGTGTGGATT
64 TTG-AAAAGGTTGCCACCAATTCATGTG-GAC-TTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * ** *
390173 TTTGAAAAAGTTACCACCAACTCGTGTGGGCCTTTGAAAAGGTTGCTACCAATTTATGTGGGATT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGG-CTTTGAAAAGGTTGCCAACAACTCGTGT-GGACT
* * * * * * * * * * *
390238 TTAAAAAAGTTACCACCAACTCATGTGAGATTTTGAAAGGGTTGTCAACAACTTGTGTGGAC-
64 TTGAAAAGGTTGCCACCAATTCATGTG-GACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * ** * ** * * *
390300 TTTAAAAAGGTTGCCACCTACTAATATGGGCTTTTGAAAAGGTTGCCATTAACTCTTCTAGACTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGTGGAC-T
* * ** * ** * *
390365 TTGAAAAGGTTGCCACCAACTCTTACGAACTTTTGAAAGGTTGCCATCAACTCGTGTGGAC-
64 TTGAAAAGGTTGCCACCAATTCATGTGGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * ** ** *** * * **
390426 CTTGAAAAAGTTGCCCCCAACTCACGTGAATTTTTTATAAGGTTGCCCCCAACTCGTGTGGACTT
1 TTTGAAAAGGTTACCAACAACTCGTGTG-GGCTTTGAAAAGGTTGCCAACAACTCGTGTGGAC-T
* * * * * * *
390491 TTGAAAAGGCTCCCACCAACTTC-TGT-CAGCATTTGAAAAGGTTGTCGA-CAACTCGTTTGAGC
64 TTGAAAAGGTTGCCACCAA-TTCATGTGGA-C-TTTAAAAAGGTTG-CCACCAACTCGTGTGGGC
390553 -
125 T
* * * * * * * * *
390553 TTTGAAAAGGTT-CTCACCAACTCATGTGGCCATTTGCAAAGCTTACGACCAACTCGTGT-AAGC
1 TTTGAAAAGGTTAC-CAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGTGGA-C
** * * * ** *
390616 TTTTGAAAAAATTGCTACCAACTCGTGTGAGA-TTTTGAAAGGTTGCCACCAACTCGTGTGGGAT
63 -TTTGAAAAGGTTGCCACCAATTCATGTG-GACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * * *
390680 TCTGAAAATGTTGCCACCAACTCATGTGGGCTATTGAAATA-GTTGCCAACAACTTGTGTAGACT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCT-TTGAAA-AGGTTGCCAACAACTCGTGTGGACT
* * * * * * * *
390744 TTGAAAAGGTTGTCACCAACTCGTGTGGGATTTTGAAAA-GTTTCCTACCAATTCGTGTGGGAT
64 TTGAAAAGGTTGCCACCAATTCATGT-GGACTTTAAAAAGGTTGCC-ACCAACTCGTGTGGGCT
* * * * * * *
390807 TTTGAAAAGGTTACCACCAACTCGTGTGGCCTTTTGAAAAGGTTGCCGACAACTTGTATAGACAT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGTGGACTT
* * * * * * ** ** *
390872 T-AAAATGATTGCCACCAACTCATGTGGGCTATTGAAATGGTTTCCAATAACTTATGTGGAC-
65 TGAAAA-GGTTGCCACCAATTCATGTGGACT-TTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* ** * * * * * *
390933 TTTGAAAAGGCTGTCACCAACTCATGTGGGATTTTGAAAA-GTTTCCTACCAACTCGTGTGGGAT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGG-CTTTGAAAAGGTTGCC-AACAACTCGTGT-GGAC
* * * * * * * * *
390997 TTTGAAAAGGTTACCACCAACTCGTGTGGCCTTTTGAAAAGGTTGCCAACAACTTGTATGGAC-
63 TTTGAAAAGGTTGCCACCAATTCATGTGGAC-TTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * * * *
391060 ATTAAAAAGGTTGCCACCAACTCATGTGGACTTT-AAAATAGTTGCCACCAACCAGTGCGGGCTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTTGAAAA-GGTTGCCAACAA-C--T-C--G--T
* * * * * * ** * * *
391124 TTGGGCTTTTGAAAAGTTTGCCACTAACTCTTGTGGACTTTTGAAAGGTTGCTATCAACTCATGT
57 GTGGAC-TTTGAAAAGGTTGCCACCAATTCATGTGGACTTTAAAAAGGTTGCCACCAACTCGTGT
*
391189 GGAC-
121 GGGCT
* * * *
391193 TTTGAAATA-GTTGCCACCAACCAGTGCGGGCTTTTGGGCTTTTGAAAAGTTTGCC-ACTAACTC
1 TTTGAAA-AGGTT---ACCAACAACT-C--G--TGTGGGC-TTTGAAAAGGTTGCCAAC-AACTC
* * * * * * *
391256 TTGTGGACTTTTG-AAAGGTTGCTATCAACTCGTGTGGACTTTGAAATGGTTGCCACCAACTCGT
55 GTGTGGAC-TTTGAAAAGGTTGCCACCAATTCATGTGGACTTTAAAAAGGTTGCCACCAACTCGT
* *
391320 GTGAGCC
119 GTGGGCT
* * * * * * * ** * *
391327 TTTAAAAAGGTTACCACCAGCTCATATGAGCTTTTGAAAAAGTTTTCACCAACTCGTGTGGACAT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGTGGACTT
* * * * *
391392 TGAAAAGGTTGCCACCAACT-AGTTTAGG-CTTTTTAAAATGG-TGCCAACAACTCGTGT-GGAT
65 TGAAAAGGTTGCCACCAATTCA-TGT-GGAC--TTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * * *
391453 TATGAAAAGGTTGCC-ACAAACTCATGTTGGCTTTGAAAAGCTTGCC-TCAACTCGTGTGGGCTT
1 TTTGAAAAGGTTACCAAC-AACTCGTGTGGGCTTTGAAAAGGTTGCCAACAACTCGTGTGGACTT
* ** * * * * * * *
391516 TGAAAAGATTGCTTCCAACTCGTGTGAACTTT-AAAAGGTTACAATCAACTCGTGTGAGCT
65 TGAAAAGGTTGCCACCAATTCATGTGGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * * * * *
391576 TTTAAAAAGGCTGCCAACAACTCATGTGGGCATTTGAAAAGATTGGCACCAAC-CTATGTGGAAT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTC-GTGTGGACT
* * * * * ** * *** * *
391640 TTGAAAAGATAGCCACAAACTT-GTGTGGGCTTGGAAAAGGCTATTACCATCTCATGTGGGC-
64 TTGAAAAGGTTGCCACCAA-TTCATGTGGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * * * * * * **
391701 TTTGAAAGGGTTGCCATCAACTTGTGTGGACATTGAAATGGTTGCCACCAACTAGTTTAAACTTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTTGAAAAGGTTGCCAACAACTCGTGTGGAC-TT
* * * * * * *
391766 TTAAAAGGTTGCCACCAACTT-GTGTAGACTTTGAAAAGGCTGCCACAAACTCGTGTTGGC-
65 TGAAAAGGTTGCCACCAA-TTCATGTGGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* ** * * ** **
391826 TTTGAAAAGGCTA-CTGCAACTCGTGTAGGCTTTGAAAAGATTGCCTCCAACTCGTGTAAACTTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTTGAAAAGGTTGCCAACAACTCGTGTGGACTTT
* * * * * * *
391890 GAAAAAGTTGTCATCAACTCATGTGGGCTTTCAAAAAGGCTGCCAACC-ACTCGTCTGGGCT
66 GAAAAGGTTGCCACCAATTCATGTGGACTTT-AAAAAGGTTGCC-ACCAACTCGTGTGGGCT
* * * * * * * * * * *
391951 TTTAAAAAGATTGCGACCAACTCATGTGGACATTGAAATGGTTGCC-ACTAACTTGTGTGGGCTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTTGAAAAGGTTGCCAAC-AACTCGTGTGGACTT
* * * * * *
392015 GGAAAAGGTTGCCACCAACTCATATGGGCTTTGAAAAGGTTGCCATCAACTCGTGTGGGCT
65 TGAAAAGGTTGCCACCAATTCATGTGGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * * *
392076 TTTAAAAAGGTTGCCACCAACTCGTGTGGGCTTTTAAAAAGGTTGCCACCAACTCATGTGGATTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGTGGA-CT
** * * * * * * * * *
392141 TTGAAAATATTACCACTAACTT-GTATGGACCTCTCAAAAGGTTACCACCAACTCATGTGGAC-
64 TTGAAAAGGTTGCCACCAA-TTCATGTGGA-CTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * **
392203 TTTGAAATGGTTGCC-ACTAACTTGTGTGGGCTTTGAAAAGGTTTCCACCAACTTATGTGGACTT
1 TTTGAAAAGGTTACCAAC-AACTCGTGTGGGCTTTGAAAAGGTTGCCAACAACTCGTGTGGACTT
*** * * * * *
392267 TGAAAAGGTTATTATCAACTCGTGTAGG-CTTTTCAAAAGGCTGCCACCAACTCGTGTGGGCT
65 TGAAAAGGTTGCCACCAATTCATGT-GGAC-TTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * *
392329 TTTGAAAAGGTTGCCAACAACTCGTGTGGGCTTTCAAAAATGTTTCCACCAA-TGCGTGTGGACT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTT-GAAAAGGTTGCCAACAACT-CGTGTGGACT
** * * * * * * * * * *
392393 TTG-ACTGTGGTGGCACCAACTT-GTATAGATTTTGAAAAGGTTACCACCAGCTCGTGTGAGCT
64 TTGAAAAG-GTTGCCACCAA-TTCATGTGGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
** * * * *
392455 TTTGAAAAGGTTACC-ACAAACTCGTGTGAACTTTGAAATGGTTGCCACCAATTCGTTTGGACTT
1 TTTGAAAAGGTTACCAAC-AACTCGTGTGGGCTTTGAAAAGGTTGCCAACAACTCGTGTGGACTT
* * * * * * * ***
392519 T-AAAATGGTTGCCTCAAACT-AGTGTGGACTTTTGAAATGGTTGGCACCAACTCATGTATAC-
65 TGAAAA-GGTTGCCACCAATTCA-TGTGGAC-TTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* ** * * * * * * *
392580 TTTGAAAATGTTGTCACCAACTCGTGTAGGCTTTAAAAACGTTGCCACCAACTCGAGTGGACTCT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTTGAAAAGGTTGCCAACAACTCGTGTGGACTTT
** * * * * **** ** * * *
392645 GAAAAGGTTGTTATCAACTCGTGTGGGCTTTTAAAATCACTGCCATTAACTCATGTAGAC-
66 GAAAAGGTTGCCACCAATTCATGTGGAC-TTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* ** ** * * * * * * *
392705 TTTGAAAAGGTTGCCCCCAACGAGTGTAGACTTTTAAAATGATTACC-ACAAACTTGTGTGGACA
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTTGAAAA-GGTTGCCAAC-AACTCGTGTGGACT
* ** * ** * * * *
392769 TTGACAAGGTCACCATCAGCTCATGTGGGCTTTTGAAAAGGTTACCACCAACTCGTGCGGGCT
64 TTGAAAAGGTTGCCACCAATTCATGTGGAC-TTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
** * * * * * * * * * * *
392832 TTTGAAATTGTTGCTACCAACTCGTGTGGACTTTGACTATGGTT-TCACCAACTTGTATAGACTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTTGA-AAAGGTTGCCAACAACTCGTGTGGACTT
* * * * * * * * *
392896 TGAAAAGGTTACCACCAACTT-GTATGG-CTTCTGAAAAGGTTGCCACCAATTCCTATTGAC-
65 TGAAAAGGTTGCCACCAA-TTCATGTGGACTT-TAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * * * * * *
392956 TTTGACTATGG-TGCCATCAACGT-GTGTAGACTTTGAAACA-GTTGCCACCAAATCATGTGGGC
1 TTTGA-AAAGGTTACCAACAAC-TCGTGTGGGCTTTGAAA-AGGTTGCCAACAACTCGTGTGGAC
* * * * * * * ** * * * ** *
393018 TTTTAAAAAGGTTGGCACCTACTCGTTTGGATTTTTGTAAATGTTACCCCCAACTTATGT-GGAT
63 -TTTGAAAAGGTTGCCACCAATTCATGTGGA-CTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * ** * *
393082 CTTTGAAAAAGTTGCTACCAACTCATGTGGAATTTTAAAAAGGTTGCCACCAACTC-TGGTGGGA
1 -TTTGAAAAGGTTACCAACAACTCGTGTGG-GCTTTGAAAAGGTTGCCAACAACTCGT-GT-GGA
* * * * *
393146 TTTTGAAAGGGTTGCTACCAACTT-ATGTGGAC-TTACAAAAGGTTGTCACCAATTCGTGTGGGC
62 CTTTGAAAAGGTTGCCACCAA-TTCATGTGGACTTTA-AAAAGGTTGCCACCAACTCGTGTGGGC
393209 T
125 T
* * * * * **
393210 TTTGAAAAAGTTTCCAACAACTTGTGTGGACTTTGAAAAGGTTGTC-ACAACTC-TGTGGGTTTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTTGAAAAGGTTGCCAACAACTCGTGT-GGACTT
* * * * * *
393273 TGAAAATGTTGCTACCAACTCATGTGCGATTTTGAAAAGGTTGCCACCAACTCGTGTGGAC-
65 TGAAAAGGTTGCCACCAATTCATGTG-GACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * ** * **** * *
393334 TTTGACAATGG-TACCACCAACTTTTATATATTTTGAAAAGGTTGCCACCAACTCATGT-GAGCT
1 TTTGA-AAAGGTTACCAACAACTCGTGTGGGCTTTGAAAAGGTTGCCAACAACTCGTGTGGA-C-
* * * * **
393397 TTTGAAAATGTTAG--A-C---T--T-T-GAC--T---ATGG-TGCCACAAACTCATGTGAAC-
63 TTTGAAAAGGTT-GCCACCAATTCATGTGGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* ** * * * * * * *
393444 TTT-----GG-TAGCCACCAACTTATGTGGGCTTTTAAAAATGTTCCCACCAACTCTTGCGGATT
1 TTTGAAAAGGTTA-CCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGTGGA-C
* * * * * * *
393503 TTTGAAAAGGTTACCACTAAAT-ATGTGGTCCTTTGAAAAGGTTGCTACCAACTCGTGTGGGAT
63 TTTGAAAAGGTTGCCACCAATTCATGTGG-ACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * ** * * * *
393566 TTTGAAAAGGTTACCACCAACTCGTCTGAGATTTTGAAAAGGTTGCTAGCAACTCTTGTGGGCTT
1 TTTGAAAAGGTTACCAACAACTCGTGTG-GGCTTTGAAAAGGTTGCCAACAACTCGTGTGGAC-T
* * * * * * *
393631 TTGAAAAGGTTGCCAACAACTT-GTATGGACTTTGAAAAGGTTGTCACCAACTCCTGTAGGCT
64 TTGAAAAGGTTGCCACCAA-TTCATGTGGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * * *
393693 TTT-AAAATGGTTGCCACCAACTCTTGTAGACTTTTGAAAATGTTGCCACCAACTCGTGTGGACT
1 TTTGAAAA-GGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGTGGACT
* * * * * * *
393757 TTGAAATGGTTGCCACAAATTCATGTAAGCTATTGGGCTTTTTAAAAGCTTGCCACCAATTCTTG
64 TTGAAAAGGTTGCCACCAATTCA--T--G----TGGAC-TTTAAAAAGGTTGCCACCAACTCGTG
*
393822 TGGACT
120 TGGGCT
* ** ** ** * *
393828 TTTG-AAAGGTT-GCAATCAACTCGTGTGAACTTTGAAATTGTTGCCATTAACTCGTGTAGATTT
1 TTTGAAAAGGTTACCAA-CAACTCGTGTGGGCTTTGAAAAGGTTGCCAACAACTCGTGTGGA-CT
* * * * ** * * * * *
393891 TTGAAAAGGTTGCCACCAACTCGTATGGCCATTTGCAAAGCTTAG-CGCTAACTTC-TATAGGCT
64 TTGAAAAGGTTGCCACCAATTCATGTGGAC-TTTAAAAAGGTT-GCCACCAAC-TCGTGTGGGCT
* * * * * * * * *
393954 TTTGAAAAGGTTGCTACCAACTCGTGTGGGATTTTG-AAAGGTTACCACCAACTCATGCAGGATT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGG-CTTTGAAAAGGTTGCCAACAACTCGTG-TGGACT
* * * * * * * *
394018 TTGAAAAGGTTGCTACCAA--CTTGTGTTAGCTTTTGAAAAGGTTGCCAACAATTTGTGTGGAC-
64 TTGAAAAGGTTGCCACCAATTCATGTG-GA-C-TTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * * * *
394080 TTTGAAAAAGTTATCACCAACTCGTATGGGCTTTTGAAAAGGTTGCGACCAACTC-TCATAGACT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGT-GTGGAC-
* * * * * * * ** *
394144 TTTGAAAATGTT-CCTACCAACTCTTGTGGGATTTTAAAAAGTTTGCTACCAACTCATGTAAGAT
63 TTTGAAAAGGTTGCC-ACCAATTCATGT-GGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * *
394208 TTTGAAAAAGTTACCACCAACTCGTAT-GGCATTTTGAAAAGGTTGCCAACAACTTGTATGGACT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGC--TTTGAAAAGGTTGCCAACAACTCGTGTGGACT
* * * * * * ** * *
394272 TTGAAAAGGTTGTCATCAACTCGTGTGGACTTTGAAAAGGTTGCCACGAA-TATTTGTAGACT
64 TTGAAAAGGTTGCCACCAATTCATGTGGACTTTAAAAAGGTTGCCACCAACT-CGTGTGGGCT
* * * * *
394334 TTTGAAAAGGTTAACACCAACTCGTGTGGACTTTGAAATGGTTGCCACCAACTCGTGTGGGCTTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTTGAAAAGGTTGCCAACAACTC--GT--G----
* * * * * * * *
394399 TGGGCTTTTGAAAAGTTTGCTACCAACTCTTATGGACTTCT-AAAAGGTTGCTATCAACTCGTGT
58 TGGAC-TTTGAAAAGGTTGCCACCAATTCATGTGGACTT-TAAAAAGGTTGCCACCAACTCGTGT
*
394463 -GGAT
121 GGGCT
* * * * * * * * * *
394467 TTTGAAATGGTTTCCACCAACTCGTGTAAGCCTTTAAAAAGTTTACCACCAAATCGTGT-GAGCT
1 TTTGAAAAGGTTACCAACAACTCGTGT-GGGCTTTGAAAAGGTTGCCAACAACTCGTGTGGA-C-
* * * * * *
394531 TTTGAAAAGGTTGCCACCAACTCGTGTGGACATTGAAAAGGTTGCCACCAACTAGTTTGGGCT
63 TTTGAAAAGGTTGCCACCAATTCATGTGGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
** * * * *
394594 TCTT-AAAATCTTACCACCAACTCGTGTGGACTTTGAAAAGGTTACC-ACTAACTCGTGTGGGCT
1 T-TTGAAAAGGTTACCAACAACTCGTGTGGGCTTTGAAAAGGTTGCCAAC-AACTCGTGTGGACT
* * * *
394657 TTGAAAAGGTTGCC-CCAACTCATGTGGACTTTGAAAAGGTTGCCATCAACCCGTGTGGGCT
64 TTGAAAAGGTTGCCACCAATTCATGTGGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * ** * * *
394718 TTTAAAAAAGCTGCCAACAACTAGTGCAGGCTTTTGAAAAGATTGCCACCAACTCATGTGGACTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGTGGACTT
* * * ** * * *
394783 TGAAATGGTTGCCACTAACTT-GTGTGTTCTTTGAAAAGGTTGCCACCAACTCATGTGGAC-
65 TGAAAAGGTTGCCACCAA-TTCATGTGGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * ** *
394843 ATTGAAAAGGTTACCATCAACTGGTGTGGGCTTTTAAAAATGTTATCATCAACTCGTGTAGG-CT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGT-GGAC-
* * * * * * *
394907 TTTAAAAAGGCTGCCACCAACTCGTGTAGG-CTTTTGAAAAGGTTGCCAACAACTCATGTGGGCT
63 TTTGAAAAGGTTGCCACCAATTCATGT-GGAC-TTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
** ** * * * * * ** * * *
394971 TTCAAAAATATTACCACCAACTTGAGTGGAC-TT-CAACTGTAGTGCCACCAAGCT-GTATAGAC
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTTGAAAAGGT--TGCCAACAA-CTCGTGTGGAC
* * * *
395033 TTTGGAAAGGTTGCTACGAA--GATGTGTGAGCTTCTAAAAATGTTAGACTTTGACTATGGTGCC
63 TTTGAAAAGGTTGCCACCAATTCATGTG-GA-CTT-T-AAAA----AG-----G----T--TGCC
* * ***
395096 ACAAACTCATGT-GAAA
109 ACCAACTCGTGTGGGCT
* * * * * * * * *
395112 TTTGAAAAGGTTGCCACCAACTCATGTGAGCTTTTAAAAAGGTTGAC-TCTAACTCATGTGGATT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAAC-AACTCGTGTGGA-C
* * * * * * * * *
395176 TTTGAAAAGGTTACCACTAACT-GTGTGGGCCTTTGAAAAGGTTGCAACCAACTCGTGTAGGAT
63 TTTGAAAAGGTTGCCACCAATTCATGT-GGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * *
395239 TTTGAAAAAGTTACCACCAACTCATGTGGGATTTTGAAAAGGTTGCCAACAACTCGTGCGGGCAT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGG-CTTTGAAAAGGTTGCCAACAACTCGTGTGGAC-T
* * * * * * *
395304 TTGAAAAGGTTACCAACAACTT-GTGTGGACTTTGAAAAGGTTGTCACCAACTCATGTGAGCT
64 TTGAAAAGGTTGCCACCAA-TTCATGTGGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * *** * * *
395366 TTTGAAAAGGTTACCACCAACTCTTCTAAACTTTTGAAAAGGTTGCCACCAACTCATGTAGACTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGTGGACTT
* * * * * ** * *
395431 TGAAATGGTTGCCACCAATTCGTGTGGGCTTTTGGGCTTTTGAAAAGGCTGCCATAAACTCTTAT
65 TGAAAAGGTTGCCACCAATTC--AT--G----TGGAC-TTTAAAAAGGTTGCCACCAACTCGTGT
*
395496 GGACT
121 GGGCT
* * * * * * * *
395501 TTTG-AAAGGTTGCCATCAACTCGTGTGGACTTTGAAAAAGTTACCACCAACTCGTGTGAATTTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTTGAAAAGGTTGCCAACAACTCGTGTGGA-CTT
* * * * * * * * **
395565 TGAAAAGGTTGCTACCAACTCATGTAGATTTTTGAAAAGGTTCCCACCAACTCCTATCAGCT
65 TGAAAAGGTTGCCACCAATTCATGTGGA-CTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * * *
395627 TTT-ACAAGGTTGCCGACAACTCGTTTGGGCTTTGGAAAAGGTTGCCACCAATTCCTGT-GACCA
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTT-GAAAAGGTTGCCAACAACTCGTGTGGA-C-
* * * * * * * * * * *
395690 TTTGCAAAGCTTACCACCAACTT-GTGTAGG-CTTTTGAAAAGATTGCTACTACCTCATGTGGGA
63 TTTGAAAAGGTTGCCACCAA-TTCATGT-GGAC-TTTAAAAAGGTTGCCACCAACTCGTGTGGGC
395753 T
125 T
* ** * * * * * * * *
395754 TTTG-AAAGGTTGCCTCCAACTCATATGGGATTTTGAAAATGTTGCCACCGACTCGTATAGACTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGG-CTTTGAAAAGGTTGCCAACAACTCGTGTGGAC-T
* ** * * * * * * *
395818 TTAAAAAGGTTGCCAATAACTT-GTATAGATTTTAAAAAGGTTGTCACCAACTCGTGTAGAC-
64 TTGAAAAGGTTGCCACCAA-TTCATGTGGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* ** * * * * *
395879 TTTGAAAAGGTTGCC-ACTAACTTTTGTAGACTTTTG-AAAGGTTGCCACCAACTTGTGTGGCCT
1 TTTGAAAAGGTTACCAAC-AACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGTGGAC-
* * * * *
395942 TTTGAAAAGGTTGCCAACAACTTGTATG-GG-CTTTAAAAAGGTTGTCACCAACTCATGTGGAC-
63 TTTGAAAAGGTTGCCACCAA-TT-CATGTGGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* ** ** * * *
396004 TTTGAAAAGGTTGCC-ACTAACTTTTGCAGACTTTTGAAAAGGTTACCACCAACTCGTGTGGACT
1 TTTGAAAAGGTTACCAAC-AACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGTGGACT
* * * * * *
396068 TTGAAATGGTTGCCACCAACTCATGTAGGCTTTTGGGCTTTTAAATA-GTTACACACCAACTCTT
64 TTGAAAAGGTTGCCACCAATTCA--T--G----TGGAC-TTTAAAAAGGTTGC-CACCAACTCGT
*
396132 GTGGACT
119 GTGGGCT
* * * ** * * * * * *
396139 TTTG-AAAGGCTGCTATTAACTCGTGTGGACTTT-AAAATGGTTGCTACCAACTCATGTAAGCCT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTTGAAAA-GGTTGCCAACAACTCGTGT-GGACT
* * * * * *
396202 TT-ATAAAGGTTACCACCAACTCATAT-GAGCTTTTGAAAAGTTTGCCACCAACTCGTGTGGAC-
64 TTGA-AAAGGTTGCCACCAATTCATGTGGA-C-TTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * * * * *
396264 ATTGAAAAGGTTGCCACCAACTAGTTTAGGCTTTTTAAAAGGTTAG-CACCAACTCGTATGGACT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTT-GCCAACAACTCGTGTGGACT
* * * * * * * *
396328 TTAAAAAGGTTGTCACAAACTT-GTGTTGGA-TTTGAAAAGGTTACC-CCAACTCGTGTAGAC-
64 TTGAAAAGGTTGCCACCAA-TTCATG-TGGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * * * * *
396388 TTTGAAAAGGTTGCCATCAACTCGTGTGGGCTTTTAAAAAGGCTGCCAACAACTTGTGTGGTCTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGC-TTTGAAAAGGTTGCCAACAACTCGTGTGGAC-T
* * * * * * *
396453 TTGAAAAGATTGCCACCAACTCACGTGGACTTTGAAATGGTTGCCACTAACTTGTGTGGGC-
64 TTGAAAAGGTTGCCACCAATTCATGTGGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
* * ** * * * **
396514 TTGGAAAAGGTTGCCCCCAACTCATGTGGACTTTGAAAAAGTTGCCATTAACTCGTGTGGACTTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTTGAAAAGGTTGCCAACAACTCGTGTGGACTTT
*
396579 GAAATGGTTGCCAC
66 GAAAAGGTTGCCAC
396593 TAACTCGTGT
Statistics
Matches: 17833, Mismatches: 4812, Indels: 2703
0.70 0.19 0.11
Matches are distributed among these distances:
104 4 0.00
105 12 0.00
106 33 0.00
107 3 0.00
109 20 0.00
110 159 0.01
111 58 0.00
112 12 0.00
113 4 0.00
114 6 0.00
115 6 0.00
116 7 0.00
117 9 0.00
118 23 0.00
119 60 0.00
120 92 0.01
121 57 0.00
122 166 0.01
123 252 0.01
124 701 0.04
125 2219 0.12
126 4711 0.26
127 4789 0.27
128 1199 0.07
129 143 0.01
130 126 0.01
131 76 0.00
132 105 0.01
133 611 0.03
134 972 0.05
135 739 0.04
136 91 0.01
137 39 0.00
138 25 0.00
139 21 0.00
140 20 0.00
141 76 0.00
142 86 0.00
143 68 0.00
144 31 0.00
145 2 0.00
ACGTcount: A:0.28, C:0.19, G:0.22, T:0.31
Consensus pattern (125 bp):
TTTGAAAAGGTTACCAACAACTCGTGTGGGCTTTGAAAAGGTTGCCAACAACTCGTGTGGACTTT
GAAAAGGTTGCCACCAATTCATGTGGACTTTAAAAAGGTTGCCACCAACTCGTGTGGGCT
Found at i:376416 original size:32 final size:32
Alignment explanation
Indices: 376250--396762 Score: 5417
Period size: 32 Copynumber: 642.1 Consensus size: 32
376240 CTATGATACA
* *
376250 AACTCGTGT-AAACTTTGAAAAGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
** * * *
376281 AACTCAAGCGAGGTTTT-AAAAAGTTAGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTT-GCCACC
* * **
376313 AACTCG-GATTGA-TTTTTAAAAAGGTTATCACC
1 AACTCGTG--TGAGATTTTGAAAAGGTTGCCACC
** * * ** * *
376345 AACTTATGTGGGCTTTCAAAAAAGTTGCTACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* *
376377 AATTCGTGTGAGATTTTGAAAAGGTTACCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
*
376409 AACTCGTGTGGGATTTTGAAAAGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
376441 AACTCATATG-GACTTTTGAAAAAGTTGCCAAC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * * * *
376473 AACTAGTGTG-GACTTTGAAAAAGTTGTCACT
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
376504 AACTCGTGTAAGCTTTTGCAACGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* *
376536 AATTCTTGT-AGACTTTTGAAAAGGTTGCCACC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
** * *
376568 AACTCGTGT-AGGGTTTGAAATGGTTGCCAAC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
376599 AATTCGTGTGGGCTTTTGGGCTTTTGAAAAGGTTGCCATC
1 AACTC--GT--G----TGAGATTTTGAAAAGGTTGCCACC
* * *
376639 AACTCTTGTG-GACTTTTG-AAACGTTGCCATC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * * *
376670 AACTCATGTG-GACTTTGAAATA-GTTACAACC
1 AACTCGTGTGAGATTTTGAAA-AGGTTGCCACC
* * *
376701 AACTTGTGTG-GATTTTTAAAAAGGTTACCACC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* *
376733 AACTTGTGTGA-ATTTTTGAAAAGGTTGCCATC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * * *
376765 AACTCCTGTCGA-CTTTTGAAAAGGTTACCAAC
1 AACTCGTGT-GAGATTTTGAAAAGGTTGCCACC
* ** * *
376797 AACTCGTTTG-GGCTTTGAAAAAGTTTCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *** *
376828 AACTCATGCG-GCCA-TTTGCAAACCATAG-CACC
1 AACTCGTGTGAG--ATTTTG-AAAAGGTTGCCACC
* * * *
376860 AACTCGTAT-AGGCTTTTGAAAAGGTTGCTACT
1 AACTCGTGTGA-GATTTTGAAAAGGTTGCCACC
* * * *
376892 AACTCATGTGGGATTTTG-AAAGTTTGCCACA
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
376923 AACTCGTGTTGA-ATTTTGAAAAGGTTGCCACC
1 AACTCGTG-TGAGATTTTGAAAAGGTTGCCACC
* * * *
376955 AACTCATGTGGGCTTTTGAAAAGGTTGCCAAC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
** * * * *
376987 AACTTTTGTG-GACTTTGAAAAGGCTACTACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* ** *
377018 AACTCATGT-AGGCCTTTGAAAAGGTTGCCATC
1 AACTCGTGTGA-GATTTTGAAAAGGTTGCCACC
* * * *
377050 AACTCATGTGAGTTTTTGAGAATGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* ** * *
377082 AACTCGTGTG-GACTTCCACTATGG-TGCCACC
1 AACTCGTGTGAGATTTTGA-AAAGGTTGCCACC
** * *
377113 AACTTTTAT-AGACTTTGAAAAGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
** * * * * * * ***
377144 AACTTATGTAAGCTTCTGAAAATGCTAGACTTT
1 AACTCGTGTGAGATTTTGAAAA-GGTTGCCACC
* * * * *
377177 AACT-ATGGTGCCACAAACTTGTGTGAACTTTGAAAAAGTTACCACA
1 AACTCGT-GTG----AGA-TT-T-TG-------AAAAGGTTGCCACC
* *
377223 AACTGGTGT-AGGA-TTTGAAAAGGTTGCCCCC
1 AACTCGTGTGA-GATTTTGAAAAGGTTGCCACC
* * **
377254 AATTCGTGCG-GGCTTTGAAAAGGTTGCC-CTC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCAC-C
* * ** * *
377285 AACTCATTTG-GGCTTTGAAAAGGTTACCATC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * *
377316 AACTAGTGT-AGCATTTTAAAAAGGCTACCAAC
1 AACTCGTGTGAG-ATTTTGAAAAGGTTGCCACC
* * *
377348 AACTTGTGTGGGCTTTTGAAAAGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * * *
377380 AATTCATATG-GACTTTCAAAAGGTTGCCACT
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
377411 AACTCGGGTGGGCTTTTAAAAAGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
377443 AACTCGTAT-AGACTTTTGAAAATGTTACCACC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * * * * *
377475 AACTCATGTG-GACTTTGACTATGG-TGTCACA
1 AACTCGTGTGAGATTTTGA-AAAGGTTGCCACC
* ** **
377506 AACTTGTGTGA-ACCTTGAAAAGGTTGCTGCC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
377537 AACTCGTGTGGGCTTTTAAAAAGGTTCCCA-C
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* *
377568 AACTCGTGTG-GGTTTTAAAAAGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * * *
377599 AACTCATATGGGCTTTTGAAAAGATTGCCAAC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* *
377631 AACTCGCAG-GAG-CTTTGAAAAGGTTGCCACC
1 AACTCG-TGTGAGATTTTGAAAAGGTTGCCACC
* * *
377662 AACTCGTGTG-GCCTTTTGAAAAGGATACCACC
1 AACTCGTGTGAG-ATTTTGAAAAGGTTGCCACC
* * *
377694 AACTCGTTTGGGCTTTTGAAAAGGTT-CCTACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCC-ACC
* * *
377726 AACTCATG-CAGGATTTTG-AAA---TGCCATC
1 AACTCGTGTGA-GATTTTGAAAAGGTTGCCACC
* * * ** *
377754 AACTCATGTCAGATTTTGAAAAAGTTTTCTCC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * * *
377786 AACTCTTCTGGGCTTTT-ATAAATGTTGCCAAC
1 AACTCGTGTGAGATTTTGA-AAAGGTTGCCACC
* * *
377818 AACTTGTGTG-GACTTTGAAAAGGTTACCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * ***
377849 AACTCGTGTGAGCTTCTGAAAATGTTAGACTTT
1 AACTCGTGTGAGATTTTGAAAAGGTT-GCCACC
* * * ** ** ** ** **
377882 GACT-ATGGTGCCATAAACTCATGTGAACTTTGAAAAGGTT
1 AACTCGT-GTG----AGA-TTTTGAAAAGGTTG-CCA--CC
** * *** ** *
377922 GCCCCCAATTTGTGTGGGCTTTGAAAAGGTTGCC-CC
1 AACTCGTGTGAG-AT----TTTGAAAAGGTTGCCACC
* * *
377958 TAACTCATGTG-GACTTTGAAAAGGTTGCCATC
1 -AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * * **
377990 AACTCATGTGGGCTTTTAAAAAAGCTT-CCAAT
1 AACTCGTGTGAGATTTT-GAAAAGGTTGCCACC
* * * * *
378022 AGCACGTG-CAGTCTTTTGAAAAGGTTGCCATC
1 AACTCGTGTGAG-ATTTTGAAAAGGTTGCCACC
* * * * *
378054 AAGTCATATG-GACTTTAAAAAGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * * *
378085 AATTCGTGTGGGCTTTTGAAATGGTTGCAATC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * *
378117 AACTTGTGT-AGACTTTTTAAAATGTTACCACT
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * * * *
378149 AACTCTTGTG-GACTTTGACTATGG-TGCCACA
1 AACTCGTGTGAGATTTTGA-AAAGGTTGCCACC
* * * * * *
378180 AACTTGTGCGA-ACTTTGAAAAAGTTGTCGCC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
378211 AAATCGTGTGGGCTTTTAAAAAGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
378243 AACTCTTGTG-GGTTGTTGAAAAAGTTGCCACC
1 AACTCGTGTGAGATT-TTGAAAAGGTTGCCACC
* * * ** *
378275 AACTCTTGTGGGCTTTCAAAAAGGTTGCCAAC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * **
378307 AACTCATG-CAG-CTTTGAAAAGGTTTTCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
378337 GACTAGTGTG-GACTTTTGAAAATGTTACCACC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * ** * *
378369 AACTCGTATGGGCCTTTGAAAAGATTGCCCCC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * ** *
378401 AATTCATGTG-GACTTTGAAAAGGTTATCATC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
378432 AACTCGTGTG-GACTTTTAAAAAGGCTACCGA-C
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCC-ACC
* * * * *
378464 AATTTGTGTGGGCTTTTGAAAAGGTTACCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * *
378496 AACTCATATGA-ACTTTAAAAAGGTTGCCACT
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * * *
378527 AATTCTTGTGGGCTTTTGAAATGGTTGCCATC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * * *
378559 AACTCCTGTCA-ACTTTTAAAAACGTTACCACT
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * * * * *
378591 AACTTGTGT-AGACTTTGATTATGG-TACCACA
1 AACTCGTGTGAGATTTTGA-AAAGGTTGCCACC
* * *
378622 AACTCGTGTGA-ACTTTGAAAAGGTTACCACT
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * **
378653 AACTCGAGTGGGCTTTTAAAAAGGTTATCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
378685 AACTCGTGTGGGTTTTTGTAAAA-GTTGCCAAC
1 AACTCGTGTGAGATTTTG-AAAAGGTTGCCACC
* * *
378717 AACTTGTGTGAGCTTTT-AAAATGGTTGCCAAC
1 AACTCGTGTGAGATTTTGAAAA-GGTTGCCACC
* *
378749 AACTTGTGTG-GACTTTGAAAAGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
** *
378780 AACTCGTGTG-GACTTTTGAAAATATTGCCAAC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* *
378812 AACTTGTGTG-GACTTTGAAATA-GTTGCCACC
1 AACTCGTGTGAGATTTTGAAA-AGGTTGCCACC
* *
378843 AACTCATGT-AGAGTTTTGAAAAGGTTGCTACC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* *
378875 AACTCATATG-GATTTTTGAAAAGGTTGCCACC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * *
378907 AACTCGTGTG-GACTTTTTATAAGGTTGCCAAC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* **
378939 AACTCGCGTG-GGCTTTGAAAAGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * ** *
378970 AACTTGTGTGA-ACTATTGAAAAAGTTATCACA
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * ** *
379002 AACTCATAT-AGGCCTTTGAAAAGGTTGCTACC
1 AACTCGTGTGA-GATTTTGAAAAGGTTGCCACC
* * *
379034 AACAT-GTATGTGATTTTGAAAAGGTTACCACC
1 AAC-TCGTGTGAGATTTTGAAAAGGTTGCCACC
** * * * **
379066 AACTAATGCGAGATATTGAAAAAGTTATCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
379098 AACTCGTGTGGGCTTTTGAAAAGGTTGCCAAC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * **
379130 AACTTGTGT-AGACTTTGAAAAGGTTGTTACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
379161 AACTCGTGTG-GACTTTTGTAAAGGTTACTACC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * *
379193 AACTCTTGT-AGACTTTTCAAAAGGTTACCACC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * ** **
379225 AACTCATGTG-GATATTGAAATA-GTAACTTCC
1 AACTCGTGTGAGATTTTGAAA-AGGTTGCCACC
* * * *
379256 AACTCTTATGGGCTTTTGGGCTTTTGAAAAGGCTGCCACC
1 AACTC------G--TGTGAGATTTTGAAAAGGTTGCCACC
* *
379296 AACTCTTGT-AGACTTTTG-AAAGGTTGCCATC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * * *
379327 AACTCATGTG-GACTTTCAAATGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * *
379358 AACTCATGTGGGCTTTTGAAAAAGTTACCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * * *
379390 AGCACGTGT-AGGTTTTTGAAAAAGTTACTACC
1 AACTCGTGTGA-GATTTTGAAAAGGTTGCCACC
* * * * ** *
379422 AACTC-TAT-AGACTTTGACTATGG-TGCTGCA
1 AACTCGTGTGAGATTTTGA-AAAGGTTGCCACC
* * * **
379452 AACTCGTGTGA-ACTTTGAAAAGATTACCAAT
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * *
379483 AACTCCTATGGGCTTTT-ACAAAGGTTACCACC
1 AACTCGTGTGAGATTTTGA-AAAGGTTGCCACC
* * ** *
379515 AACTCATTTGACTTTTTGTAAAA-GTTACCACC
1 AACTCGTGTGAGATTTTG-AAAAGGTTGCCACC
* * * *
379547 AACTCGTGTGGGCTTTTAAAAAGGTTGCCAAC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * ** *
379579 AACTCATG-CAGGCTTTGCAAAGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
379610 AACTCATGTG-GACTTTTGAAAATGTTGCCAAC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * *
379642 AACTTGTGTG-GACTTTGAAAAGGTTGTCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * * *
379673 ATCTCCTTTAAGCTTTTGAAAAGGTTGCTACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
*
379705 AACTCATGT-AGGATTTTGAAAAGGTTGCCACC
1 AACTCGTGTGA-GATTTTGAAAAGGTTGCCACC
* * * *
379737 AACTTGTGTGAGCTTTTGAAAAGGTTGCTAAC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
** * * *
379769 AACTTATGTG-GA-CTTAAAAAGGTTGTCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
379799 AATTCATGTG-GATTTTTCAAAAGGTTGCGACC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* *
379831 AATTC-TCGT-AGACTTTTGAAAAGGTTGCTACC
1 AACTCGT-GTGAGA-TTTTGAAAAGGTTGCCACC
* * * * *
379863 AACTCGTGTGGGCTTTTGGGCTTTTGAAAGGTTGCTATC
1 AACTCGTGTGAGATTTT--G-----AAAAGGTTGCCACC
* * * * * *
379902 AACTCATGTG-GACTTTGGAATGATTACCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
379933 AACTCGTGTGGGCCTTTT-AAAAGGTTACCACC
1 AACTCGTGTGAG-ATTTTGAAAAGGTTGCCACC
*
379965 AACTCGTGT-AGACTTTGAAAAGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
379996 AACTCGTGT-AGGTAATTGAAAAAGTTACCACC
1 AACTCGTGTGAGAT-TTTGAAAAGGTTGCCACC
** * * * * *
380028 AACTCACGT-AGGCTTTTAAAAATGTTGACAAC
1 AACTCGTGTGA-GATTTTGAAAAGGTTGCCACC
* * **
380060 AACTCGTGTG-G-CTTTGAGAAGGTTATCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* *
380090 AACTCGTATG-GACTTCTT-AAAAGGTTACCACC
1 AACTCGTGTGAGA-TT-TTGAAAAGGTTGCCACC
* * ** *
380122 AACTCGTGTG-GCTTTTGAAAAGGCTGTTACG
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
** * * * * * *
380153 AACTTATATGGGATATTAAAAATGTTGCCATC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* ** *
380185 AACTCATGTGAGATTTTGAAAAGGTTGCTGCT
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
380217 AACTCGTGTGGGCTTTTGACAAA-GTTGCTACC
1 AACTCGTGTGAGATTTTGA-AAAGGTTGCCACC
* * * *
380249 AACTCTTAT-AGACTTTTGAAAAAGTTGCCATC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* ** * * *
380281 AACTCTTGTG-GGCTTTGAAATGGTTACCACA
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * *
380312 AATTTGTGTGGGCTTTTGGACTATTGAAAAGGTTGCTACC
1 AACTCGTGT--G-----AGA-TTTTGAAAAGGTTGCCACC
* * * **
380352 AACT--TTTACAGACTTTTG-AAAGGTTGCTATT
1 AACTCGTGT-GAGA-TTTTGAAAAGGTTGCCACC
* * * *
380383 AATTCATGTG-CACTTTGAAATA-GTTGCCACC
1 AACTCGTGTGAGATTTTGAAA-AGGTTGCCACC
* * **
380414 AACTTGTGTGA-ATTTTTTAAAAGGTT-CTTGCC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGC-CACC
*
380446 AACTCGTCTG-GATTTTTGAAAAGGTTGCCACC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * *
380478 AACTCCTGTCG-GCTTTTGAAAAGGTTGCCAAC
1 AACTCGTGT-GAGATTTTGAAAAGGTTGCCACC
* * ** * *
380510 AACTCATTTG-GGCTTTGAAAAAGTTGTCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* ** * * *
380541 AACTTGTGTGCCCA-TTTGCAAAGCTTACCACC
1 AACTCGTGTG-AGATTTTGAAAAGGTTGCCACC
* * *
380573 AA--CGTGTGTAGGCTTTTAAAAAGGTTGCTACC
1 AACTCGTGTG-A-GATTTTGAAAAGGTTGCCACC
* * *
380605 AACTCGTG-CAGGATTTTG-AAAGGTCGTCACC
1 AACTCGTGTGA-GATTTTGAAAAGGTTGCCACC
* * * **
380636 AACTCATGTGAGCTTTTAAAAAGGTTGCCAAT
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
** *
380668 AACTCGTGTG-GGCTTTGAAAAGGTTGCTACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* *
380699 AACTCGTGTGA-ACTTTTGGAAAGGTTCCCACC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* ** *
380731 AACTCATGTCG-GCCTTTGAAAAGGTTGCTACC
1 AACTCGTGT-GAGATTTTGAAAAGGTTGCCACC
* * * *
380763 AACTCATGTGAGCTTTTGAAATGATTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* *
380795 AACTCTTCT-AGACTTTTGAAAAGGTTGCCACC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * * *
380827 AACTCGTGTG-GACTTTGAAATGGTTTCCACT
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
380858 AATTCGTGTGGGCTTTTGGGCTTTTGAAAAAGTTGCCACC
1 AACTC--GT--G----TGAGATTTTGAAAAGGTTGCCACC
* * **
380898 AACTCTTGTG-GACTTTTG-AAAGGTTGGCATT
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * *
380929 AACTAGTGTG-GACTTTGAAATA-GTTAG-CACT
1 AACTCGTGTGAGATTTTGAAA-AGGTT-GCCACC
* *
380960 AACACGTGT-AGATTTTTCAAAAGGTTGCCACC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * * *
380992 AACTCCTGTGAGCTCTTGAAGAGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* *
381024 AACTCGTGTG-GACTTTTGCAAAGGTTGCCACT
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * * * * *
381056 AACCCAT-TGGGCTTTTGAAATGGTTACCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
** * * * *
381087 AACTCGTGTGAGCCTTT-CAAATGTTACTACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* *
381118 TACTCGTGT-AGGATTTTG---A----GCGACC
1 AACTCGTGTGA-GATTTTGAAAAGGTTGCCACC
** * * * *
381143 GGCTCGAGTGGGATTTTGGAAAGGTTACCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
381175 AACTTGTGTGGGTTTTTGAAAAGGTTGCCAAC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * ** * * **
381207 AAGTTGTGTG-GACATTGAAAAAGTTGTCATT
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * **
381238 AACTTGTGTG-GACTTTTGAAAAAGTTTCTAAT
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * * *
381270 AACTTGTGTG-GAGTTTGAAAAGGTTGTCACT
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* *
381301 AACTC-TGTG-GTTTTTGAAAAGGTTGCTACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * *
381331 AACTCGTATGTGATTTTGAAAAGATTACTACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
** * * * *
381363 AACTTATGTGGGCTTTTGAAAAGGTTGCTAAC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
** * * ** *
381395 AACTTATGT-TGACTTTGAAAAGGTTGTTACT
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
381426 AACTCGTGTGGGCTTTTTAAAGAAAAGGTTGCCAAC
1 AACTCGTGTGAG-ATTTT---GAAAAGGTTGCCACC
* * * **
381462 TACTTGTGT-AGACTTTGAAAAGGTTGTTACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
381493 AACTCATGTGGGCTTTTGAAAAGGTTGTCC-CT
1 AACTCGTGTGAGATTTTGAAAAGGTTG-CCACC
* * *
381525 AACTCTTGT-AGACTTTTCAAAAGGATGCCACC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* ** * **
381557 AACTCGTATG-GACATTGAAATA-GTTACTTCC
1 AACTCGTGTGAGATTTTGAAA-AGGTTGCCACC
* *
381588 AACTCTTGTGGGCTTTTGGGCTTTTGAAAAGGTTGCCACC
1 AACTC--GT--G----TGAGATTTTGAAAAGGTTGCCACC
* * *
381628 AACTCTTGT-AAACTTTTG-AAAGGTTGCCATC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * * * *
381659 AACTCGTGT-AGACTTTGACATGGTTGCCGCA
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
381690 AACTCATGT-AGGCTTTTGAAAAGGTTGCTACT
1 AACTCGTGTGA-GATTTTGAAAAGGTTGCCACC
* * * * * * *
381722 AGCACATGT-ACGCTTTTGAAAAAGTTACTACC
1 AACTCGTGTGA-GATTTTGAAAAGGTTGCCACC
* * * * *
381754 AACTCCTGT-AGACTTTGACTATGG-TGCCACA
1 AACTCGTGTGAGATTTTGA-AAAGGTTGCCACC
* * *
381785 AACTCGTGTGA-ACTTTGAAAAGGTTACCACT
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * *
381816 AACTCATGTGGGCTTTTAAAAAGGTTACCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* *
381848 AACTCGTGTG-GGTTTCTGTAAAA-GTTACCACC
1 AACTCGTGTGAGATTT-TG-AAAAGGTTGCCACC
* * *
381880 AACTCATGTGAAATTTT-AAAATGGTTGCCAAC
1 AACTCGTGTGAGATTTTGAAAA-GGTTGCCACC
***
381912 AACTCGTGT-AGGCATTGAAAAGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * *
381943 AATTCGTGTG-GACTTCTAAAAATGTTGCCAAC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * * * ** *
381975 AACTTGTGCG-GACTTTGAAAGGGTTGTTAGC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
382006 AACTCGTGTGAGCTTTTGAAGAGGTTGCTACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
382038 AACTCATGTGGGATTTTGAAAAGGTTACCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * ** *
382070 ATCTTGTGTGAGCTTTTGGAGTGGTTGCCAAC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
** *
382102 AACTTATGTG-GATTTTGAAAAGGTTGTCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
382133 AACTCATGTGAGCTTTTGAAAAGGTTGCGACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* *
382165 AACTC---T-CG-TTTTGAAAAGGTTACCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * ** *
382192 ATCTTGTGTGAGCTTTTGGAGTGGTTGCCAAC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
**
382224 AACTTATGTG-GATTTTGAAAAGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * **
382255 ATCTCATGTG-GACTTTGAAAAGGTTGACATT
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
** ** * ** * *
382286 AACTTATGTG-GGCTTTAAAAAGAGCAGCGACA
1 AACTCGTGTGAGATTTTGAAAAG-GTTGCCACC
** * *
382318 AACTCGTGTCTGCTTTTGAAAAGGTTGCTACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * ** * *
382350 AATTCATGTCG-TCTTTTGAAAATGTTACCACC
1 AACTCGTGT-GAGATTTTGAAAAGGTTGCCACC
* *****
382382 AACTCGTGTG-GACTTTGACTTTATTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * * * *
382413 AACTTGTCTG-GACTTTGACTATGG-TACCGCC
1 AACTCGTGTGAGATTTTGA-AAAGGTTGCCACC
* * * * * * *
382444 ACACTTGTAT-AGACTTTAAAAAGATTACCAGC
1 A-ACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * ** *
382476 AACTCGTGTGGGCTTTTGAAAATATT-ACATCC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCA-CC
* * * * **
382508 AACTCGTGT-AGACTTTGACTATGG-TGCTATA
1 AACTCGTGTGAGATTTTGA-AAAGGTTGCCACC
* *
382539 AACTCGTGTGA-ACTTTGTAAAGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * *
382570 AACTCCTGTGGGCTTTTGAAAAGGTTACCAAC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* ** *
382602 AACTCGTTTG-GGCTTTGAAAATCG-TGCCACC
1 AACTCGTGTGAGATTTTGAAAA-GGTTGCCACC
* * *
382633 AACACATGTGCA-CTTTTGCAAAAGG-TGCCACC
1 AACTCGTGTG-AGATTTTG-AAAAGGTTGCCACC
* * *
382665 AACTCGTGTGCGCTTTTGAAAAGGTTACCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
** * *
382697 AACTTATCTGAGATTTTGAAAAGG-TGCTACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
382728 AACTCGAGTGAGATTTT-AAAAGGGTTGTCACA
1 AACTCGTGTGAGATTTTGAAAA-GGTTGCCACC
* * * *
382760 AACTTGTGTGAGCTTTTGAAAAGGTTGCGAAC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * *
382792 AACTTGTATG-GATTTTGAAAAAGTTGTCATC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * * *
382823 AACCCGTGTGGGCTTTTGAAAAAGTTTCCAGC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
382855 AACTTGTGTG-GACTTTGAAAAAGTTGTCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * *
382886 AACAC-TGTGGGTTTTTGAAAAGATTGCTACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* **
382917 AACTCATGTGCTATTTTGAAAAGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
382949 AACTCGTGT-AGACCTTCG-AAAGGTTGCCAAC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
** * * ** *
382980 AACTTATGT-TGACTTTGAAAAGGTTGTTACT
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* ** * * **
383011 AACTCGCGACAGCTTTTGAAAAGGTTACTGCC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
383043 AACTCGTGTAGGCTTTTAGGCTTTTGAGAAGGTTGCCACT
1 AACTCGTGT--G-----A-GATTTTGAAAAGGTTGCCACC
* **
383083 AACAT-GTGTG-GACTTTGAAAAGGTTGCCATT
1 AAC-TCGTGTGAGATTTTGAAAAGGTTGCCACC
** ** * * *
383114 AAGACGTGTG-GGCTTTAAATAAGGCTGCTACC
1 AACTCGTGTGAGATTTTGAA-AAGGTTGCCACC
* * * * *
383146 AACTCATGTGGGCTTTTGAAAATGTTGCCACT
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
383178 AACTCGTGTG-GACTTTGACTATGG-TGCCACC
1 AACTCGTGTGAGATTTTGA-AAAGGTTGCCACC
** * * * ** *
383209 AACTTTTAT-AAACTTCAAAAAGGATGCCATCC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCA-CC
* * *
383241 AACTAGTGTGAGCTTTTGAAAATGTTG-----
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * **
383268 GACT--T-TGACTATGGTGCCACAAACGCGTGTG-----
1 AACTCGTGTGA-GATTTTG--A-AAA-G-GT-TGCCACC
* * ** *** * * **
383299 AAGT-TTGAAAAGATTACCACCAA----CCCATG
1 AACTCGTG-TGAGATTTTGA-AAAGGTTGCCACC
** * * * * ** * * *
383328 AAGGCTTTTAAAAAGGTTGCCAACAA-CTCGTG-TA-G
1 AACTCGTGT-GAGATTTTG--AA-AAGGT--TGCCACC
* * ** * * ***
383363 AA-T--TTTGAAAATGTTACAACCAACTCATGTGGGCCTTTG
1 AACTCGTGTG-AGAT-TT-TGA--AA---AGGT-TGCC-ACC
* * * * * ** **
383402 AAATGGT-TGCTACCAATTCGTTTAAGATTTTG--AAA
1 AACTCGTGTG--A--GATT--TTGAAAAGGTTGCCACC
* *** * * ** **
383437 AAGT--TACCACCAACTCATGTG-GGATTTTG--A--
1 AACTCGTGTGA--GA-T--TTTGAAAAGGTTGCCACC
** * * ***
383467 AA-AGGT-TACCACCAACTCATTTG----GGCTTTTGA--
1 AACTCGTGT--GA--GA-T--TTTGAAAAGG-TTGCCACC
* * * * *
383499 AAAT-GTTGCCAACAATGTTGACTTTGAAAAAGTTGTCACC
1 AACTCG-TG-------TG-AGATTTTGAAAAGGTTGCCACC
* * *
383539 AACTCGGGTGGGCTTTTGAAAAGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
** * * * *
383571 AACTATTGTG-GAATTCTAAAAAGGTTACCACT
1 AACTCGTGTGAG-ATTTTGAAAAGGTTGCCACC
* * *
383603 AACTCGTGT-AGACTTTGAAATGGTTGTCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* *
383634 AATTCGTGTGGGTTTTCAGGCTTTTGAAAAGGTTGCCACC
1 AACTCGTGT--G-----A-GATTTTGAAAAGGTTGCCACC
* * * **
383674 AACTCTTGTG-GACTTTG-AAAGGTTGTCGTC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
383704 AACTC-T-TACAGACTTTGAAATA-GTTGCCACT
1 AACTCGTGT-GAGATTTTGAAA-AGGTTGCCACC
* * *
383735 AACTCATGT-ACAGTTTTGAAAAGGTTGCTACC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * *
383767 AACTCGTGTGGGTTTTTGAAAAGGTTGCTACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
383799 AACTCATGTG-GACTTTTTATAAGGTTGCCAAC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
** ** *
383831 AACTCACGTG-GGCTTCGAAAAGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* ** **
383862 AACTCGTGTG-GACTATTGAAAAGGTTATCATA
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
** *
383894 AACTCGTG-GAGGCCTTTGAAAAGGTTGCTACC
1 AACTCGTGTGA-GATTTTGAAAAGGTTGCCACC
* * * * *
383926 AACAT-GTATGTGATTTTGAAAAGGTTACCTCT
1 AAC-TCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * **
383958 AATTCATGCGAGATTTTGAAAAAGTTATCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
383990 AACTTGTGTGAGCTTTTAAAAAGGTTGCCAAC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * ***
384022 AACTTGTGT-AGACTTTGAAAAGGTTATTACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
384053 AACTCGTGTGGGCTTTTGAAAAGGTTACTACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* *
384085 AACTCTTGT-AGACTTTTCAAAAGGTTGCCACC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* ** * **
384117 AACTCATGT-AGACATTGAAATA-GTGGCTTCC
1 AACTCGTGTGAGATTTTGAAA-AGGTTGCCACC
** * * * *
384148 AACTTTTATGGGCTTTTGGGCTTTTAAAACGGATGCCACC
1 AACTCGTGTGAGATTTT--G-----AAAA-GGTTGCCACC
* *
384188 AACTCTTGT-AGACTTTTG-AAAGGTTGCCATC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
** ** * * *
384219 AACTTATGTG-GACATTCAAATGGTTGCCACT
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
384250 AACTCGTGTGGGCTTTTGAAAAGGTTACCATC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * *
384282 AACACGTGT-AGGCTTTTGAAAAAGTTACTACC
1 AACTCGTGTGA-GATTTTGAAAAGGTTGCCACC
* * * * *
384314 AACTCATGT-AGACTTTGACTATGG-TGCCACA
1 AACTCGTGTGAGATTTTGA-AAAGGTTGCCACC
* ** * **
384345 AACCCGTGTGA-ACATTGAAAAGGTTACCAGT
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * * *
384376 AACTCCTATGGGCTTTT-AAAATGGTTACCACT
1 AACTCGTGTGAGATTTTGAAAA-GGTTGCCACC
* *
384408 AACTTGTGTG-GCTTTTTGTAAAA-GTTGCCACC
1 AACTCGTGTGAG-ATTTTG-AAAAGGTTGCCACC
* * *
384440 AACTCGTGTGAGCTTTTAAAAAGGTTGCCAAC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
**
384472 AACTCGTGT-AGGCTTTGAAAAGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
384503 AACTCATGTG-GACTTTTGAAAATGTTGCCAAC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
** * *
384535 AACTTATGTG-GACTTTGAAAAGGTTGTCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
384566 AACTCCTGTGAGCTTTTGAAAAGGTTGCTACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* *
384598 AACTCATGTG-GATTTTGAAAAGGTTGCCACT
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * **
384629 AACTTGTATGAGCTTTTGGAAAGGTTGCCAAT
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
** * * * *
384661 AACTTATGTG-GACTTTAAAAAGGTTGTCATC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * **
384692 AACTCGTGTGGGCTTTTGAAAAGGTTGTGACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
384724 AACT-TTCAT-AGACTTTTGAAAAGGTTACCACC
1 AACTCGT-GTGAGA-TTTTGAAAAGGTTGCCACC
* * * * *
384756 AACCCGTGT-AGGCTTTTGGGCTTTTGAAAGGTTGCTATC
1 AACTCGTGTGA-GATTTT--G-----AAAAGGTTGCCACC
* * * *
384795 AACTCGTGT-AGACTTTGAAATGATTACCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
384826 AACTCGTGTCG-GCCTTTT-AAAAGGTTACCACT
1 AACTCGTGT-GAG-ATTTTGAAAAGGTTGCCACC
* * *
384858 AACTCGTGT-ACACTTTAAAAAGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
384889 AACTCGTGT-AGGTAGTTGAAAAAGTTTCCACC
1 AACTCGTGTGAGAT-TTTGAAAAGGTTGCCACC
** * * * *
384921 AACTCACG-CAGGCTTTTGAAAAGGTTGACAAC
1 AACTCGTGTGA-GATTTTGAAAAGGTTGCCACC
* * **
384953 AACTCGTGTG-G-CTTTGAAAATGTTATCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * *
384983 AACTCATATG-GACTTCTGAAAAGGTTACCGCC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * ** *
385015 AACTCATGTGGGCCTTTGAAAAGGTTGCTACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * * *
385047 AACTCATATGGGATTTTAAAAATGTTGCCATC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
385079 TACTCATGTGAGATTTTGAAAAGGTTGGTC-CT
1 AACTCGTGTGAGATTTTGAAAAGGTT-GCCACC
* * * * *
385111 AACTCGCGTGGGCTTTTGAAAAAGTTGCTACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * ** *
385143 AACTC-T-TGAAGACTTTTAAAAAAGTTATCATC
1 AACTCGTGTG-AGA-TTTTGAAAAGGTTGCCACC
** * *
385175 AACTCGTGTG-GGCTTTGAAATGGTTACCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
385206 AATTTGTGTGGGCTTTTGGGCTATTGAAAAGGTTGCCACC
1 AACTCGTGTGAG---AT----T-TTGAAAAGGTTGCCACC
* * * *
385246 AACT--TTTACAGACTTTTG-AAAGGTTGCTATC
1 AACTCGTGT-GAGA-TTTTGAAAAGGTTGCCACC
* *
385277 AACTCGTGTG-GACTTTGAAATA-GTTACCACC
1 AACTCGTGTGAGATTTTGAAA-AGGTTGCCACC
*
385308 AACTCGTGTGA-ATTTTTGAAAAGGTTCCCACC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
**
385340 AACTCGTGTG-GATTTTTGAAAAGGTAACCACC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * * **
385372 AACTCCTATTG-GGTTTTGAAAAGGTTGCCAAT
1 AACTCGT-GTGAGATTTTGAAAAGGTTGCCACC
* * * * *
385404 AACTCATTTGGGCTTTGGAAAA-GTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
385435 AACTTGTGTG-GCCA-TTT-ACAAAGCTTACCACC
1 AACTCGTGTGAG--ATTTTGA-AAAGGTTGCCACC
* *
385467 AACTCGTGT-AGGCTTTTGAAAAGGTTGCTACC
1 AACTCGTGTGA-GATTTTGAAAAGGTTGCCACC
* **
385499 AACTTGTGT-AGGATTTTG-AAAGGTTGTTACC
1 AACTCGTGTGA-GATTTTGAAAAGGTTGCCACC
* * * *
385530 AACTCATGT-AGGCTTTTGAAAAAGTTGCCAAC
1 AACTCGTGTGA-GATTTTGAAAAGGTTGCCACC
** * *
385562 AACTCGTGTG-GGCTTTGAAAATGTTGCTACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* *
385593 AACTCGTGTG-GACTTTTGAAAAGATTCCCACC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * * ** * *
385625 GACTCATGTGGGCCTTTGAAAAGGTTGCTACT
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
385657 AACTCGTATGAGCTTTTGAAATGATTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* *
385689 AACTCTTCT-AGACTTTTGAAAAGGTTGCCACC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* *
385721 AACTCGTGTG-GACTTTGGCAAAGGTTGCCACC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * * *
385753 AACTCATGTGGGCTTTTGAAATA-GTTACCACC
1 AACTCGTGTGAGATTTTGAAA-AGGTTGCCACC
* ** *
385785 AACTCGTGTGGGCCTTTG-AAAGGTTGCTACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* *
385816 AACTCGTGTCAGATTTTGAAAAGGTTGCGACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
385848 AACTCGAGTGGGATTTTGGAATGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
385880 AACTTGTGTGGGTTTTTGAAAAGGTTGCCAAC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* ** * * **
385912 AAGTTATGTGAGCA--TTGGAAAGGTTGTCATT
1 AACTCGTGTGAG-ATTTTGAAAAGGTTGCCACC
* * *** *
385943 AACTCATGTG-GACTTTTGAAAAAGTTTTTAAC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * * *
385975 AACTTGTGT-AAAGTTTGAAAAGGTTGTCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
386006 AACTC-TATG-GTTTTTGAAAAGGTTGCTACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
386036 AACTCGTGTGTGATTTTGAAAAGGTTACTACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * *
386068 AACTCATGTGGGCTTTTGAAAAGGTTGCTAAC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
** * * *** *
386100 AACTTATGT-TGACTTTGAAAAGGTTATTACT
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * *
386131 AACTCATGTGGGCTTTTTAAAAAAAGGTTGCCAAC
1 AACTCGTGTGAG-ATTTT--GAAAAGGTTGCCACC
* * **
386166 AACTTGTGT-AGACTTTGAAAAGGTTGTTACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
386197 AACTCGTGTGGGCTTTTGAAAAGGTGGACC-CT
1 AACTCGTGTGAGATTTTGAAAAGGTTG-CCACC
* *
386229 AACTCTTGT-AGACTTTTCAAAAGGTTGCCACC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* ** * **
386261 AACTCGTATG-GACATT-AAAATAGTTGCTTCC
1 AACTCGTGTGAGATTTTGAAAA-GGTTGCCACC
* *
386292 AACTCTTGTGGGCTTTTGGGCTTTTGAAAAGGTTGCCACC
1 AACTC--GT--G----TGAGATTTTGAAAAGGTTGCCACC
* * *
386332 AACTCTTGT-AGACTTTTG-AAAGGTTGTCATC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * *
386363 AACTCGTGTG-GACTTTGAAATGGTTGTCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
386394 AACTCGTGTG-GCTTTTGAAAAGGTTACTAGC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * * * *
386425 AGCAT-ATGT-AGGCTTTTAAAAAAGTTACTACC
1 AAC-TCGTGTGA-GATTTTGAAAAGGTTGCCACC
* * * * *
386457 AACTTGTGT-AGACTTTGACTATGG-TGCCACA
1 AACTCGTGTGAGATTTTGA-AAAGGTTGCCACC
* * * *
386488 AACTCGTGTGA-ACTTGGAAAAGGTTACCACT
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * *
386519 AACTCATGCGAGCTTTTAAAAAGGTTACCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* *
386551 AACTCGTGTGAGATTTTAAAAAGGTTGCCAAC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
*** * *
386583 AACTCGTGT-AGGCATTGAAAAGATTACCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * *
386614 AACTTGTGT-AGGCA-TCTGAAAATGTTGCAAAC
1 AACTCGTGTGA-G-ATTTTGAAAAGGTTGCCACC
** * * *
386646 AACTTATGTG-GACTTTGAAATGGTTACCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * ** *
386677 AACTTGTGTGGGCCTTTG-AAAGGTTGCTACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* *
386708 AACTCGTGTCAGATTTTGAAAAGGTTGCGACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
386740 AACTTGAGT-AGGATTTTGGAAAGGTTGTCACC
1 AACTCGTGTGA-GATTTTGAAAAGGTTGCCACC
* * *
386772 AACTC-TGTG-GTTTTTGAAAAAGTTGCTACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * *
386802 AACTCATGTGTGATTTTGAAAAAGTTACTACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* *
386834 AACTCTTGT-AGACTTTTG-AAAGGTTGCCATC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* *
386865 AACTCGTGTG-GACTTTGAAATGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
386896 AACTCGTGT-AGGCTTTTGAAAAGGTTACTACC
1 AACTCGTGTGA-GATTTTGAAAAGGTTGCCACC
** * * * * *
386928 AACAAGTGT-AGGCTTTTGAAAAAGTTACTATC
1 AACTCGTGTGA-GATTTTGAAAAGGTTGCCACC
* * * *
386960 AACTCGTAT-AGACTTTGACTATGG-TGCCA-C
1 AACTCGTGTGAGATTTTGA-AAAGGTTGCCACC
* ** *
386990 AACCTCGTGTGA-ACTTTGAAAAGGTAACCACT
1 AA-CTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * *
387022 AACTCCTGTGGGCTTTTAAAAAGGTTACCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * *
387054 AACTCGTGTG-GGTTTCTCCAAAA-GTTACCGCT
1 AACTCGTGTGAGATTT-T-GAAAAGGTTGCCACC
** *
387086 AACTCGTGTGAGA---T--AAAGGTTGCTGCT
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
387113 AACTCATCTTGA-CTTTTGAAAAGTTTGCCACC
1 AACTCGT-GTGAGATTTTGAAAAGGTTGCCACC
** * *
387145 AACTATTGT-AGACTTTTGAAAAAGTTACCACC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* ** * *
387177 AACTCATGTG-GGCTTTGAAATGGTTGCTACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
387208 AATTTGTGTG-GACTTTTGGGCTATTAAAATGGTTGCCAGC
1 AACTCGTGTGAGA-TTTT--G-----AAAA-GGTTGCCACC
** ** * *
387248 AACTTTTACG-GATTTTTG-AAAGGTTGCTATC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * * *
387279 AACACGTGTG-GACTTT-AAAATAGTTTCCACC
1 AACTCGTGTGAGATTTTGAAAA-GGTTGCCACC
* * *
387310 AACACATGTGA-ATTTTTGAAAAAGTTGCCACC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
387342 AACTCGTGT-AGATTTTTGAAAAGGTTGCCACC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * * * * *
387374 ATCTCCTGTCAGCTTTTGAAAAGGTTACCAAC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * ** *
387406 AACTCATTTG-GGCTTTGAAAAAGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * **
387437 AACTTGTGTG-GCCA-TTTGCAAAGCTTAACACC
1 AACTCGTGTGAG--ATTTTGAAAAGGTTGCCACC
* * * *
387469 AACTCGTG-CAGGCTTTTAAAAAGGTTGCTACC
1 AACTCGTGTGA-GATTTTGAAAAGGTTGCCACC
* * *
387501 AACTCATGT-AGGATTTTG-AAAGGATGTCACC
1 AACTCGTGTGA-GATTTTGAAAAGGTTGCCACC
* * *
387532 AACTCATGTG-GCTTTTGAAAAGGTTGCCAAC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
** ** *
387563 AACTTTTGTG-GGCTTTGAAAAGGTTGCTACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
387594 AACTAGTGTG-GACTTTTGAAAAGGTTCCCACT
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * *
387626 AACTCATGTG-GACCTTTGAAAAGGTTGCTACC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * * * **
387658 AACTCGCGTGAGCTTTGGAAAAGGTTTCCAAA
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* *
387690 AACTTGTGTG-GACTTTGAAAAGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
387721 AACTCGTGTGTGATTTTGAAAAGTTTTCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
387753 AACTCATGTGGGATTTTGAAAAGGTTACCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * ** *
387785 AACTCATATGGGCCTTTGAAAAGGTTGCTACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* *
387817 AACTCATGTGGGATTTTGAAATA-GTTGCCACC
1 AACTCGTGTGAGATTTTGAAA-AGGTTGCCACC
* * *
387849 AACTCTTCT-AGACTTTTGAAAAGGTTGTCACC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * * * * * *
387881 AACCCATATG-GACTTTGAAATGGTTGTCACT
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
387912 AATTCGTGTGGGCTTTTGGGCTTTTGAAAAGGTTGCCACC
1 AACTC--GT--G----TGAGATTTTGAAAAGGTTGCCACC
* * **
387952 AACTCTTGTGA-ACTTTTG-AAAGGTTGGCATT
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * *
387983 AACTCGTGTG-GACTTTT--ATA-GTTACCACT
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* *
388012 AACTTGTGTG-GAATTTTGAAAAGGTTGTCACC
1 AACTCGTGTGAG-ATTTTGAAAAGGTTGCCACC
* * * * * *
388044 GACTCCTATGAGCTCTTGAAAAGGTTGTCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
388076 AACTCATGTG-GCCTTTTGCAAAGGTTGCCACC
1 AACTCGTGTGAG-ATTTTGAAAAGGTTGCCACC
* * * * *
388108 AACTCATGTGGGCTTTTGAAATGGTTACCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* **
388140 AACTCGTGTG-GGTCTTTG-AAAGGTTGTTACC
1 AACTCGTGTGAGAT-TTTGAAAAGGTTGCCACC
* * *
388171 AACTCGTGTCAGATTTTGAAAAGGTTACGACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
388203 AAATCGAGTGGGATTTTGGACAA-GTTGCCACC
1 AACTCGTGTGAGATTTT-GAAAAGGTTGCCACC
* * * * *
388235 AACTTGTGTGGGATTTTAAAAAAGCTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* ** * *
388267 AACTTGTGTG-GACGTTGAAAAGGTTGTCACT
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
388298 AACTCGTGTG-GACTTTTGAAAAAGCTT-CTAAC
1 AACTCGTGTGAGA-TTTTG-AAAAGGTTGCCACC
* * * *
388330 AACTTGTGT-AGAGTTTGAAAAGTTTGTCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* *
388361 AACTC-TATG-G-TTTTGACAAAGGTTGCTACC
1 AACTCGTGTGAGATTTTGA-AAAGGTTGCCACC
* *
388391 AACTCGTGTGTGATTTTGAAAAGGTTACCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
388423 AACTCGTGTGGGATTTTGAAAAGGTTGCTAAC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
388455 AACTTGTGTG-GACTTTGAAAAGGTTGTCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* *
388486 AACTCGTCT-AGGCTTTTGAAAAGGTTGCCACC
1 AACTCGTGTGA-GATTTTGAAAAGGTTGCCACC
* * * *
388518 AATTCTTCT-AGACCTTTGAAAAGGTTGCCACC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* *
388550 AACTC-TGTG-GACTTTGAAATGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
388580 AATTCGTAGGGGCTTTTGGGCTTTTGAAAAAGTTGCCACC
1 AACTCGT----G----TGAGATTTTGAAAAGGTTGCCACC
** * **
388620 AACTCGTGTG-GACTTTTG-AACTGTTGGCATG
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* *
388651 AACTCGTGT-AGACTTTGAAATA-GTTACCACC
1 AACTCGTGTGAGATTTTGAAA-AGGTTGCCACC
388682 AACTCGTGTG-GATTTTTGAAAAGGTTGCCACC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* ** * *
388714 AACTCGTGTG-GACTTTGACTAGGGTGCCACA
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
388745 AACTCGGGTGA-ACTTTGTAAAGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * *
388776 AACTCCTGTGGGCTCTTGGAAAGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* *
388808 AACTCCTGTG-GACTTTTGCAAAGGTTGCCACC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * * * * *
388840 AACTCATGTGGGCTTTTGAAATGGTTACTACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* ** *
388872 AACTCGTGTGGGCCTTTGAAAAGGTTGCTACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
388904 AACTCATGTTAGATTTTGAAAAGAG-CGCCACC
1 AACTCGTGTGAGATTTTGAAAAG-GTTGCCACC
*
388936 AACTC------GA--TTAAAAAGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * * * *
388960 AATTTGTGTAAGCTTTTGAAAAAGTTTCCAAC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
388992 AACTTGTGTG-GACTTTGAAGAGGTTGTCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
389023 AACTC-TATGGGTTTTTGAAAAGGTTGCAACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
389054 AACTCATGTGCGATTTTCAAAAGGTTACCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
389086 AACTCGTGTGGGCTTTTGAAAAGGTTGCCAAC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *** *
389118 AA--CGTGTGTTGACTTTGAAAATGTTATTACT
1 AACTCGTGTG-AGATTTTGAAAAGGTTGCCACC
* * * *
389149 AACTCATGT-AGGCTTTTGAAAAGCTTGCTACC
1 AACTCGTGTGA-GATTTTGAAAAGGTTGCCACC
* * *
389181 AACTCGTGTGGGCTTTTGGGCTTTTAAAAAGGTTGTCACC
1 AACTCGTGTGAGATTTT--G------AAAAGGTTGCCACC
* * *
389221 AACTCGTGTGA-ACTTTAAAAAGGTTGCCATC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * ** *
389252 AACTCATGTGGGCTTTAAAAAAGGCTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * *
389284 AAATCGTGTGGGCTTTTGAAAACGTTGCCATC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* *
389316 AACTCATGTG-GACTTTGAAAAGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
** * * *
389347 AACTTATGTGA-ACTTCTAAAAATGTTG-----
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * ** * ****
389374 GACT--T-TGAAAAGGTTGCCAACAA-ATTG-TGTG
1 AACTCGTGTG-AGATTTTG--AA-AAGGTTGCCACC
* * * * * * ***
389405 GA-T--TTTGAAAAGTTTTCTATCAA-CTCATG--TGG
1 AACTCGTGTG-AGA-TTTT-GA-AAAGGT--TGCCACC
* * * * * * * **
389437 GA-T--TTTGAAAAGTTTGCTACCAA--CT-CATATG
1 AACTCGTGTG-AGATTTTG--A-AAAGGTTGC-CACC
** ** * *** ** *
389468 AGA-TTTTGAAAAGGTTACCACCAACTCGTGTG---GC
1 A-ACTCGTG-TGAGATTTTGA--AA-AGGT-TGCCACC
* * ** * * **
389502 --CT--TTTGAAAAAGTTGCCAACAA-CTTG-TATG
1 AACTCGTGTG-AGATTTTG--AA-AAGGTTGCCACC
* * ** * * *** * *
389532 GACT-TTGAAAAGGTTGCTAGCAACTCGTGTG-GACTTTG
1 AACTCGTG-TGAGATT--TTG-AAAAGGT-TGCCAC---C
*** * * *
389570 AAAAGGTTGCCATGAACTTTTGTAGACTTTTGAAAAAGTTACCGCC
1 AACTCG-TG---TG-A--------GA-TTTTGAAAAGGTTGCCACC
* * * *
389616 AATTCGTGTGA-ACTTTGAAATGGTTACCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
389647 AATTCATGTGAGCTTTTAGGCTTTTGAAAAGTTTGCCACC
1 AACTCGTGTGAG-----A---TTTTGAAAAGGTTGCCACC
* * * * **
389687 AACTCTTGCG-GACTTTTG-AAGGGTTGCTATT
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * *
389718 AACTTGTGTG-GACTTTGAAATA-GTTGCC-CTT
1 AACTCGTGTGAGATTTTGAAA-AGGTTGCCAC-C
*** * * * *
389749 AACAATTTTGGGCTTTTTAAAAGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* ** * *
389781 AACTCATGTG-GGCTTTGAAAAGGTTACCCCC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * ***
389812 AACTTGTGTG-GACTTTGAAAAGGTTGCTTTC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * * * *
389843 AACCCTTGTGGGCA-TTTAAAAAGGCTACCAAC
1 AACTCGTGTGAG-ATTTTGAAAAGGTTGCCACC
* ** * **
389875 AACTAGT-ACAGGCTTTTGAAAAAATTGCCACC
1 AACTCGTGTGA-GATTTTGAAAAGGTTGCCACC
** * * * * *
389907 AACTTATGCG-GACTTTGAAATGGTTTCCACT
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * **
389938 AACTTGTATG-GGCTTTGAAAAGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
389969 AACTCATGTG-GACTTTGAAAAGGTTGCCATC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * *
390000 AACTCATGTGTGCTTTTAAAAAGGTTGCTACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * * **
390032 ATCTCATGTG-GCTTTTGAAAATGTTACCAAT
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * *
390063 AACTCGTGTGGGCTTTCGAAAATGTTGCCACA
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
390095 AACTCGTGT-AAAATTTGAAAAAGGTTTCCACC
1 AACTCGTGTGAGATTTTG-AAAAGGTTGCCACC
* * * * * *
390127 AACTCATCTGCGCTTTTAAAAAGGATGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* *
390159 AACTCGTGTG-GATTTTTGAAAAAGTTACCACC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* ** *
390191 AACTCGTGTGGGCCTTTGAAAAGGTTGCTACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* ** * * * *
390223 AATTTATGTGGGATTTTAAAAAAGTTACCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
390255 AACTCATGTGAGATTTTGAAAGGGTTGTCAAC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
390287 AACTTGTGTG-GACTTTAAAAAGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* ** * * * **
390318 TACTAATATGGGCTTTTGAAAAGGTTGCCATT
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* *
390350 AACTCTTCT-AGACTTTTGAAAAGGTTGCCACC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* ** *
390382 AACTCTTACGA-ACTTTTG-AAAGGTTGCCATC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
** * *
390413 AACTCGTGTG-GACCTTGAAAAAGTTGCCCCC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
** * * *
390444 AACTCACGTGA-ATTTTTTATAAGGTTGCCCCC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* *
390476 AACTCGTGTG-GACTTTTGAAAAGGCTCCCACC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* *
390508 AACTTC-TGTCAGCA-TTTGAAAAGGTTGTCGA-C
1 AAC-TCGTGTGAG-ATTTTGAAAAGGTTG-CCACC
* *
390540 AACTCGTTTGAG-CTTTGAAAAGGTT-CTCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGC-CACC
* * * * *
390571 AACTCATGTG-GCCA-TTTGCAAAGCTTACGACC
1 AACTCGTGTGAG--ATTTTGAAAAGGTTGCCACC
* * ** *
390603 AACTCGTGTAAGCTTTTGAAAAAATTGCTACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
390635 AACTCGTGTGAGATTTTG-AAAGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
390666 AACTCGTGTGGGATTCTGAAAATGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * *
390698 AACTCATGTGGGCTATTGAAATA-GTTGCCAAC
1 AACTCGTGTGAGATTTTGAAA-AGGTTGCCACC
* * *
390730 AACTTGTGT-AGACTTTGAAAAGGTTGTCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* *
390761 AACTCGTGTGGGATTTTGAAAA-GTTTCCTACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCC-ACC
* * *
390793 AATTCGTGTGGGATTTTGAAAAGGTTACCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
*
390825 AACTCGTGTG-GCCTTTTGAAAAGGTTGCCGA-C
1 AACTCGTGTGAG-ATTTTGAAAAGGTTGCC-ACC
* * ** *
390857 AACTTGTAT-AGACATT-AAAATGATTGCCACC
1 AACTCGTGTGAGATTTTGAAAA-GGTTGCCACC
* * * * * * **
390888 AACTCATGTGGGCTATTGAAATGGTTTCCAAT
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
** * * *
390920 AACTTATGTG-GACTTTGAAAAGGCTGTCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
390951 AACTCATGTGGGATTTTGAAAA-GTTTCCTACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCC-ACC
* *
390983 AACTCGTGTGGGATTTTGAAAAGGTTACCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* *
391015 AACTCGTGTG-GCCTTTTGAAAAGGTTGCCAAC
1 AACTCGTGTGAG-ATTTTGAAAAGGTTGCCACC
* * ** *
391047 AACTTGTATG-GACATTAAAAAGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
391078 AACTCATGTG-GACTTT-AAAATAGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAA-GGTTGCCACC
* * * * *
391109 AACCAGTGCGGGCTTTTGGGCTTTTGAAAAGTTTGCCACT
1 AA-C--T-C--G--TGTGAGATTTTGAAAAGGTTGCCACC
* * *
391149 AACTCTTGTG-GACTTTTG-AAAGGTTGCTATC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* *
391180 AACTCATGTG-GACTTTGAAATA-GTTGCCACC
1 AACTCGTGTGAGATTTTGAAA-AGGTTGCCACC
* * * * *
391211 AACCAGTGCGGGCTTTTGGGCTTTTGAAAAGTTTGCCACT
1 AA-C--T-C--G--TGTGAGATTTTGAAAAGGTTGCCACC
* * *
391251 AACTCTTGTG-GACTTTTG-AAAGGTTGCTATC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* *
391282 AACTCGTGTG-GACTTTGAAATGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
** * *
391313 AACTCGTGTGAGCCTTTAAAAAGGTTACCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * * **
391345 AGCTCATATGAGCTTTTGAAAAAGTTTTCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
**
391377 AACTCGTGTG-GACATTGAAAAGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * *
391408 AACTAGT-TTAGGCTTTTTAAAATGG-TGCCAAC
1 AACTCGTGTGA-GATTTTGAAAA-GGTTGCCACC
* *
391440 AACTCGTGTG-GATTATGAAAAGGTTGCCACA
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
391471 AACTCATGTTG-G-CTTTGAAAAGCTTGCC-TC
1 AACTCGTG-TGAGATTTTGAAAAGGTTGCCACC
** * **
391501 AACTCGTGTG-GGCTTTGAAAAGATTGCTTCC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
391532 AACTCGTGTGA-ACTTT-AAAAGGTTACAATC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
391562 AACTCGTGTGAGCTTTTAAAAAGGCTGCCAAC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
391594 AACTCATGTGGGCA-TTTGAAAAGATTGGCACC
1 AACTCGTGTGAG-ATTTTGAAAAGGTTGCCACC
* * * * *
391626 AAC-CTATGTG-GAATTTGAAAAGATAGCCACA
1 AACTC-GTGTGAGATTTTGAAAAGGTTGCCACC
* ** * * ***
391657 AACTTGTGTG-GGCTTGGAAAAGGCTATTACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * ** * *
391688 ATCTCATGTG-GGCTTTGAAAGGGTTGCCATC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* ** *
391719 AACTTGTGTG-GACATTGAAATGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
391750 AACTAGT-TTAAACTTTTTAAAAGGTTGCCACC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * * *
391782 AACTTGTGT-AGACTTTGAAAAGGCTGCCACA
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * **
391813 AACTCGTGTTG-G-CTTTGAAAAGGCT-ACTGC
1 AACTCGTG-TGAGATTTTGAAAAGGTTGCCACC
** * *
391843 AACTCGTGT-AGGCTTTGAAAAGATTGCCTCC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * *
391874 AACTCGTGT-AAACTTTGAAAAAGTTGTCATC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * ** *
391905 AACTCATGTGGGCTTTCAAAAAGGCTGCCAACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCC-ACC
* * * * * *
391938 -ACTCGTCTGGGCTTTTAAAAAGATTGCGACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* ** * *
391969 AACTCATGTG-GACATTGAAATGGTTGCCACT
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* ** *
392000 AACTTGTGTG-GGCTTGGAAAAGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * ** *
392031 AACTCATATG-GGCTTTGAAAAGGTTGCCATC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
392062 AACTCGTGTGGGCTTTTAAAAAGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
392094 AACTCGTGTGGGCTTTTAAAAAGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* ** * *
392126 AACTCATGTG-GATTTTTGAAAATATTACCACT
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * * * * *
392158 AACTTGTATG-GACCTCTCAAAAGGTTACCACC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * * *
392190 AACTCATGTG-GACTTTGAAATGGTTGCCACT
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* ** *
392221 AACTTGTGTG-GGCTTTGAAAAGGTTTCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
** * *** *
392252 AACTTATGTG-GACTTTGAAAAGGTTATTATC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
392283 AACTCGTGT-AGGCTTTTCAAAAGGCTGCCACC
1 AACTCGTGTGA-GATTTTGAAAAGGTTGCCACC
* * *
392315 AACTCGTGTGGGCTTTTGAAAAGGTTGCCAAC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * ** * *
392347 AACTCGTGTGGGCTTTCAAAAATGTTTCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* ** * *
392379 AA-TGCGTGTG-GACTTTG-ACTGTGGTGGCACC
1 AACT-CGTGTGAGATTTTGAAAAG-GTTGCCACC
* * *
392410 AACTTGTAT-AGATTTTGAAAAGGTTACCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
392441 AGCTCGTGTGAGCTTTTGAAAAGGTTACCACA
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* *
392473 AACTCGTGTGA-ACTTTGAAATGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * *
392504 AATTCGTTTG-GACTTT-AAAATGGTTGCCTCA
1 AACTCGTGTGAGATTTTGAAAA-GGTTGCCACC
* * *
392535 AACTAGTGTG-GACTTTTGAAATGGTTGGCACC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * * * *
392567 AACTCATGT-ATACTTTGAAAATGTTGTCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
** * *
392598 AACTCGTGT-AGGCTTTAAAAACGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * ** *
392629 AACTCGAGTG-GACTCTGAAAAGGTTGTTATC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *** **
392660 AACTCGTGTGGGCTTTT-AAAATCACTGCCATT
1 AACTCGTGTGAGATTTTGAAAA-GGTTGCCACC
* * *
392692 AACTCATGT-AGACTTTGAAAAGGTTGCCCCC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
** * * *
392723 AACGAGTGT-AGACTTTT-AAAATGATTACCACA
1 AACTCGTGTGAGA-TTTTGAAAA-GGTTGCCACC
* ** * ** *
392755 AACTTGTGTG-GACATTGACAAGGTCACCATC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * *
392786 AGCTCATGTGGGCTTTTGAAAAGGTTACCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * ** *
392818 AACTCGTGCGGGCTTTTGAAATTGTTGCTACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
392850 AACTCGTGTG-GACTTTGACTATGGTT-TCACC
1 AACTCGTGTGAGATTTTGA-AAAGGTTGCCACC
* * * *
392881 AACTTGTAT-AGACTTTGAAAAGGTTACCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
392912 AACTTGTATG-GCTTCTGAAAAGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * * * * *
392943 AATTCCTAT-TGACTTTGACTATGG-TGCCATC
1 AACTCGTGTGAGATTTTGA-AAAGGTTGCCACC
*
392974 AA--CGTGTGTAGACTTTGAAACA-GTTGCCACC
1 AACTCGTGTG-AGATTTTGAAA-AGGTTGCCACC
* * * * * *
393005 AAATCATGTGGGCTTTTAAAAAGGTTGGCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * * *
393037 TACTCGTTTG-GATTTTTGTAAATGTTACCCCC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
** * *
393069 AACTTATGTG-GATCTTTGAAAAAGTTGCTACC
1 AACTCGTGTGAGAT-TTTGAAAAGGTTGCCACC
* *
393101 AACTCATGTG-GAATTTTAAAAAGGTTGCCACC
1 AACTCGTGTGAG-ATTTTGAAAAGGTTGCCACC
* * *
393133 AACTC-TGGTGGGATTTTGAAAGGGTTGCTACC
1 AACTCGT-GTGAGATTTTGAAAAGGTTGCCACC
** * ** *
393165 AACTTATGTG-GACTTACAAAAGGTTGTCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * * *
393196 AATTCGTGTGGGCTTTTGAAAAAGTTTCCAAC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
393228 AACTTGTGTG-GACTTTGAAAAGGTTGTCA-C
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
393258 AACTC-TGTGGGTTTTTGAAAATGTTGCTACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* *
393289 AACTCATGTGCGATTTTGAAAAGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
393321 AACTCGTGTG-GACTTTGACAATGG-TACCACC
1 AACTCGTGTGAGATTTTGA-AAAGGTTGCCACC
** * *
393352 AACTTTTAT-ATATTTTGAAAAGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * ***
393383 AACTCATGTGAGCTTTTGAAAATGTTAGACTTT
1 AACTCGTGTGAGATTTTGAAAAGGTT-GCCACC
* * * * ** *
393416 GACT-ATGGTGCCACAAACTCATGTGAACTTTGGTAGCCACC
1 AACTCGT-GTG----AGA-T--TTTGAA--AAGGTTGCCACC
** * * * * *
393457 AACTTATGTGGGCTTTTAAAAATGTTCCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
393489 AACTCTTGCG-GATTTTTGAAAAGGTTACCACT
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * *
393521 AAAT-ATGTG-G-TCCTTTGAAAAGGTTGCTACC
1 AACTCGTGTGAGAT--TTTGAAAAGGTTGCCACC
* *
393552 AACTCGTGTGGGATTTTGAAAAGGTTACCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
393584 AACTCGTCTGAGATTTTGAAAAGGTTGCTAGC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
393616 AACTCTTGTGGGCTTTTGAAAAGGTTGCCAAC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
393648 AACTTGTATG-GACTTTGAAAAGGTTGTCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* *
393679 AACTCCTGT-AGGCTTTT-AAAATGGTTGCCACC
1 AACTCGTGTGA-GATTTTGAAAA-GGTTGCCACC
* *
393711 AACTCTTGT-AGACTTTTGAAAATGTTGCCACC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * *
393743 AACTCGTGTG-GACTTTGAAATGGTTGCCACA
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * *
393774 AATTCATGTAAGCTATTGGGCTTTTTAAAAGCTTGCCACC
1 AACTC--GT--G----TGAGATTTTGAAAAGGTTGCCACC
* * * *
393814 AATTCTTGTG-GACTTTTG-AAAGGTTGCAATC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* ** **
393845 AACTCGTGTGA-ACTTTGAAATTGTTGCCATT
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
393876 AACTCGTGT-AGATTTTTGAAAAGGTTGCCACC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * * * *
393908 AACTCGTATG-GCCA-TTTGCAAAGCTTAG-CGCT
1 AACTCGTGTGAG--ATTTTGAAAAGGTT-GCCACC
* * *
393940 AACTTC-TAT-AGGCTTTTGAAAAGGTTGCTACC
1 AAC-TCGTGTGA-GATTTTGAAAAGGTTGCCACC
* *
393972 AACTCGTGTGGGATTTTG-AAAGGTTACCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
394003 AACTCATG-CAGGATTTTGAAAAGGTTGCTACC
1 AACTCGTGTGA-GATTTTGAAAAGGTTGCCACC
* * * *
394035 AACTTGTGTTAGCTTTTGAAAAGGTTGCCAAC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * **
394067 AATTTGTGTG-GACTTTGAAAAAGTTATCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
394098 AACTCGTATGGGCTTTTGAAAAGGTTGCGACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* *
394130 AACTC-TCAT-AGACTTTTGAAAATGTT-CCTACC
1 AACTCGT-GTGAGA-TTTTGAAAAGGTTGCC-ACC
* * * * *
394162 AACTCTTGTGGGATTTTAAAAAGTTTGCTACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
394194 AACTCATGTAAGATTTTGAAAAAGTTACCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* *
394226 AACTCGTATG-GCATTTTGAAAAGGTTGCCAAC
1 AACTCGTGTGAG-ATTTTGAAAAGGTTGCCACC
* * * * *
394258 AACTTGTATG-GACTTTGAAAAGGTTGTCATC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* *
394289 AACTCGTGTG-GACTTTGAAAAGGTTGCCACG
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * **
394320 AA-T-ATTTGTAGACTTTTGAAAAGGTTAACACC
1 AACTCGTGTG-AGA-TTTTGAAAAGGTTGCCACC
* *
394352 AACTCGTGTG-GACTTTGAAATGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
394383 AACTCGTGTGGGCTTTTGGGCTTTTGAAAAGTTTGCTACC
1 AACTC--GT--G----TGAGATTTTGAAAAGGTTGCCACC
* * * * *
394423 AACTCTTATG-GACTTCT-AAAAGGTTGCTATC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* *
394454 AACTCGTGTG-GATTTTGAAATGGTTTCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* ** * * *
394485 AACTCGTGTAAGCCTTTAAAAAGTTTACCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* *
394517 AAATCGTGTGAGCTTTTGAAAAGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
**
394549 AACTCGTGTG-GACATTGAAAAGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * ** *
394580 AACTAGTTTGGGCTTCTT-AAAATCTTACCACC
1 AACTCGTGTGAGATT-TTGAAAAGGTTGCCACC
* * *
394612 AACTCGTGTG-GACTTTGAAAAGGTTACCACT
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
**
394643 AACTCGTGTG-GGCTTTGAAAAGGTTGCC-CC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
394673 AACTCATGTG-GACTTTGAAAAGGTTGCCATC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * * * *
394704 AACCCGTGTGGGCTTTTAAAAAAGCTGCCAAC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
394736 AACTAGTG-CAGGCTTTTGAAAAGATTGCCACC
1 AACTCGTGTGA-GATTTTGAAAAGGTTGCCACC
* * * *
394768 AACTCATGTG-GACTTTGAAATGGTTGCCACT
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* *
394799 AACT--TGTGTGTTCTTTGAAAAGGTTGCCACC
1 AACTCGTGTGAGAT-TTTGAAAAGGTTGCCACC
* ** * *
394830 AACTCATGTG-GACATTGAAAAGGTTACCATC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * * ** *
394861 AACTGGTGTGGGCTTTTAAAAATGTTATCATC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
394893 AACTCGTGT-AGGCTTTTAAAAAGGCTGCCACC
1 AACTCGTGTGA-GATTTTGAAAAGGTTGCCACC
* *
394925 AACTCGTGT-AGGCTTTTGAAAAGGTTGCCAAC
1 AACTCGTGTGA-GATTTTGAAAAGGTTGCCACC
* * * ** ** *
394957 AACTCATGTGGGCTTTCAAAAATATTACCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * **
394989 AACTTGAGTG-GA-CTT-CAACTGTAGTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGT--TGCCACC
* * * * *
395020 AAGCT-GTAT-AGACTTTGGAAAGGTTGCTACG
1 AA-CTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * * * ***
395051 AAGAT-GTGTGAGCTTCTAAAAATGTTAGACTTT
1 AA-CTCGTGTGAGATTTTGAAAAGGTT-GCCACC
* * * *
395084 GACT-ATGGTGCCACAAACTCATGTGAAATTTGAAAAGGTTGCCACC
1 AACTCGT-GTG----AGA-T--TTTG-AA------AAGGTTGCCACC
* * * * * *
395130 AACTCATGTGAGCTTTTAAAAAGGTTGACTCT
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
395162 AACTCATGTG-GATTTTTGAAAAGGTTACCACT
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* ** *
395194 AACT-GTGTGGGCCTTTGAAAAGGTTGCAACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* *
395225 AACTCGTGT-AGGATTTTGAAAAAGTTACCACC
1 AACTCGTGTGA-GATTTTGAAAAGGTTGCCACC
* * *
395257 AACTCATGTGGGATTTTGAAAAGGTTGCCAAC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
395289 AACTCGTGCGGGCA-TTTGAAAAGGTTACCAAC
1 AACTCGTGTGAG-ATTTTGAAAAGGTTGCCACC
* * *
395321 AACTTGTGTG-GACTTTGAAAAGGTTGTCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
395352 AACTCATGTGAGCTTTTGAAAAGGTTACCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
395384 AACTCTTCT-AAACTTTTGAAAAGGTTGCCACC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * *
395416 AACTCATGT-AGACTTTGAAATGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * **
395447 AATTCGTGTGGGCTTTTGGGCTTTTGAAAAGGCTGCCATA
1 AACTC--GT--G----TGAGATTTTGAAAAGGTTGCCACC
* * *
395487 AACTCTTATG-GACTTTTG-AAAGGTTGCCATC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * *
395518 AACTCGTGTG-GACTTTGAAAAAGTTACCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
*
395549 AACTCGTGTGA-ATTTTTGAAAAGGTTGCTACC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* *
395581 AACTCATGT-AGATTTTTGAAAAGGTTCCCACC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * * * *
395613 AACTCCTATCAGCTTTT-ACAAGGTTGCCGA-C
1 AACTCGTGTGAGATTTTGAAAAGGTTGCC-ACC
* * * *
395644 AACTCGTTTGGGCTTTGGAAAAGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * * *
395676 AATTCCTGTGACCA-TTTGCAAAGCTTACCACC
1 AACTCGTGTGA-GATTTTGAAAAGGTTGCCACC
* * * * *
395708 AACTTGTGT-AGGCTTTTGAAAAGATTGCTACT
1 AACTCGTGTGA-GATTTTGAAAAGGTTGCCACC
* * * *
395740 ACCTCATGTGGGATTTTG-AAAGGTTGCCTCC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
395771 AACTCATATGGGATTTTGAAAATGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * **
395803 GACTCGTAT-AGACTTTTAAAAAGGTTGCCAAT
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * * *
395835 AACTTGTAT-AGATTTTAAAAAGGTTGTCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* *
395866 AACTCGTGT-AGACTTTGAAAAGGTTGCCACT
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
**
395897 AACTTTTGT-AGACTTTTG-AAAGGTTGCCACC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * *
395928 AACTTGTGTG-GCCTTTTGAAAAGGTTGCCAAC
1 AACTCGTGTGAG-ATTTTGAAAAGGTTGCCACC
* * ** * *
395960 AACTTGTATG-GGCTTTAAAAAGGTTGTCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
395991 AACTCATGTG-GACTTTGAAAAGGTTGCCACT
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* *
396022 AACT--TTTGCAGACTTTTGAAAAGGTTACCACC
1 AACTCGTGTG-AGA-TTTTGAAAAGGTTGCCACC
* *
396054 AACTCGTGTG-GACTTTGAAATGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
396085 AACTCATGT-AGGCTTTTGGGCTTTTAAATA-GTTACACACC
1 AACTCGTGTGA-GATTTT--G-----AAA-AGGTTGC-CACC
* * * **
396125 AACTCTTGTG-GACTTTTG-AAAGGCTGCTATT
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* *
396156 AACTCGTGTG-GACTTT-AAAATGGTTGCTACC
1 AACTCGTGTGAGATTTTGAAAA-GGTTGCCACC
* * ** *
396187 AACTCATGTAAGCCTTT-ATAAAGGTTACCACC
1 AACTCGTGTGAGATTTTGA-AAAGGTTGCCACC
* * * *
396219 AACTCATATGAGCTTTTGAAAAGTTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
**
396251 AACTCGTGTG-GACATTGAAAAGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * *
396282 AACTAGT-TTAGGCTTTTTAAAAGGTTAG-CACC
1 AACTCGTGTGA-GATTTTGAAAAGGTT-GCCACC
* * * * *
396314 AACTCGTATG-GACTTTAAAAAGGTTGTCACA
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* *
396345 AACTTGTGTTG-GA-TTTGAAAAGGTTACC-CC
1 AACTCGTG-TGAGATTTTGAAAAGGTTGCCACC
* *
396375 AACTCGTGT-AGACTTTGAAAAGGTTGCCATC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * * *
396406 AACTCGTGTGGGCTTTTAAAAAGGCTGCCAAC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
396438 AACTTGTGTG-GTCTTTTGAAAAGATTGCCACC
1 AACTCGTGTGAG-ATTTTGAAAAGGTTGCCACC
** * * *
396470 AACTCACGTG-GACTTTGAAATGGTTGCCACT
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* ** * *
396501 AACTTGTGTG-GGCTTGGAAAAGGTTGCCCCC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * * **
396532 AACTCATGTG-GACTTTGAAAAAGTTGCCATT
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
396563 AACTCGTGTG-GACTTTGAAATGGTTGCCACT
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
396594 AACTCGTGT-AGGCTTTTGGGCCTTTGAAAAGTTTACCACC
1 AACTCGTGTGA-G---AT-----TTTGAAAAGGTTGCCACC
* * * *
396634 AACTCTTATG-GACTTTTG-AAAGGTTGCTATC
1 AACTCGTGTGAGA-TTTTGAAAAGGTTGCCACC
* * *
396665 AACTCGTGT-TGACTTTGAAATGGTTGCCACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
** * * **
396696 AACTCGTGTGAGCCTTTAAAAAGGTTACCATA
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
* * *
396728 AACTCGTGT-TGATATTGAAAAGGTTGCGACC
1 AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
396759 AACT
1 AACT
396763 AGTTTAGGCT
Statistics
Matches: 14986, Mismatches: 4292, Indels: 2408
0.69 0.20 0.11
Matches are distributed among these distances:
23 1 0.00
24 21 0.00
25 24 0.00
26 6 0.00
27 45 0.00
28 31 0.00
29 73 0.00
30 627 0.04
31 5309 0.35
32 7699 0.51
33 319 0.02
34 46 0.00
35 41 0.00
36 36 0.00
37 15 0.00
38 50 0.00
39 105 0.01
40 449 0.03
41 26 0.00
42 12 0.00
43 2 0.00
44 4 0.00
45 3 0.00
46 19 0.00
47 12 0.00
48 1 0.00
49 5 0.00
50 2 0.00
51 1 0.00
52 2 0.00
ACGTcount: A:0.28, C:0.19, G:0.22, T:0.31
Consensus pattern (32 bp):
AACTCGTGTGAGATTTTGAAAAGGTTGCCACC
Found at i:376636 original size:40 final size:40
Alignment explanation
Indices: 376581--376656 Score: 107
Period size: 40 Copynumber: 1.9 Consensus size: 40
376571 TCGTGTAGGG
* * *
376581 TTTGAAATGGTTGCCAACAATTCGTGTGGGCTTTTGGGCT
1 TTTGAAAAGGTTGCCAACAACTCGTGTGGACTTTTGGGCT
* *
376621 TTTGAAAAGGTTGCCATCAACTCTTGTGGACTTTTG
1 TTTGAAAAGGTTGCCAACAACTCGTGTGGACTTTTG
376657 AAACGTTGCC
Statistics
Matches: 31, Mismatches: 5, Indels: 0
0.86 0.14 0.00
Matches are distributed among these distances:
40 31 1.00
ACGTcount: A:0.20, C:0.16, G:0.26, T:0.38
Consensus pattern (40 bp):
TTTGAAAAGGTTGCCAACAACTCGTGTGGACTTTTGGGCT
Found at i:376665 original size:71 final size:71
Alignment explanation
Indices: 376548--376685 Score: 172
Period size: 71 Copynumber: 1.9 Consensus size: 71
376538 TTCTTGTAGA
* * * *
376548 CTTTTGAAAAGGTTGCCACCAACTCGTGTAGGGTTTGAAATGGTTGCCAACAATTCGTGTGGGCT
1 CTTTTGAAAAGGTTGCCACCAACTCGTGTAGGGTTTGAAATCGTTGCCAACAACTCATGTGGACT
376613 TTTGGG
66 TTTGGG
* * * *
376619 CTTTTGAAAAGGTTGCCATCAACTCTTGT-GGACTTTTGAAA-CGTTGCCATCAACTCATGTGGA
1 CTTTTGAAAAGGTTGCCACCAACTCGTGTAGG--GTTTGAAATCGTTGCCAACAACTCATGTGGA
376682 CTTT
64 CTTT
376686 GAAATAGTTA
Statistics
Matches: 57, Mismatches: 8, Indels: 4
0.83 0.12 0.06
Matches are distributed among these distances:
70 2 0.04
71 48 0.84
72 7 0.12
ACGTcount: A:0.22, C:0.19, G:0.25, T:0.34
Consensus pattern (71 bp):
CTTTTGAAAAGGTTGCCACCAACTCGTGTAGGGTTTGAAATCGTTGCCAACAACTCATGTGGACT
TTTGGG
Found at i:379370 original size:102 final size:103
Alignment explanation
Indices: 379190--379375 Score: 250
Period size: 102 Copynumber: 1.8 Consensus size: 103
379180 AAAGGTTACT
* **
379190 ACCAACTCTTGTAGACTTTTCAAAAGGTTACCACCAACTCATGTGGATATTGAAATAGTAACTTC
1 ACCAACTCTTGTAGACTTTTCAAAAGGTTACCACCAACTCATGTGGATATTCAAATAGTAACCAC
*
379255 CAACTCTTATGGGCTTTTGGGCTTTTGAAAAGGCTGCC
66 CAACTCATATGGGCTTTTGGGCTTTTGAAAAGGCTGCC
* * * * **
379293 ACCAACTCTTGTAGACTTTT-GAAAGGTTGCCATCAACTCATGTGGACT-TTCAAATGGTTGCCA
1 ACCAACTCTTGTAGACTTTTCAAAAGGTTACCACCAACTCATGTGGA-TATTCAAATAGTAACCA
*
379356 CCAACTCATGTGGGCTTTTG
65 CCAACTCATATGGGCTTTTG
379376 AAAAAGTTAC
Statistics
Matches: 71, Mismatches: 11, Indels: 3
0.84 0.13 0.04
Matches are distributed among these distances:
102 50 0.70
103 21 0.30
ACGTcount: A:0.26, C:0.22, G:0.19, T:0.32
Consensus pattern (103 bp):
ACCAACTCTTGTAGACTTTTCAAAAGGTTACCACCAACTCATGTGGATATTCAAATAGTAACCAC
CAACTCATATGGGCTTTTGGGCTTTTGAAAAGGCTGCC
Found at i:380065 original size:197 final size:197
Alignment explanation
Indices: 379491--380074 Score: 448
Period size: 197 Copynumber: 3.0 Consensus size: 197
379481 ATAACTCCTA
* * *
379491 TGGGCTTTT-ACAAAGGTTACCACCAACTCAT-T-TGACTTTTTGTAAAAG-TTACCACCAACTC
1 TGGGCTTTTGA-AAAGGTTGCTACCAACTCATGTAGGAC--TTTG-AAAAGATTACCACCAACTC
* * * * * **
379552 GTGTGGGCTTTTAAAAAGGTTGCCAACAACTCATGCAGGCTTTGCAAAGGTTGCCACCAACTCAT
62 GTGTGAGCTTTTGAAAAGGTTACCAACAACTCATGTAGAC-TTAAAAAGGTTGCCACCAACTCAT
* * * * * *** * * *
379617 GTGGACT-TTTGAAAATGTTGCCAACAACTTGTGTGGAC-TTTGAAAAGGTTG-T--C-AC-CAT
126 GTGGA-TAATTCAAAAAGTTACCACCAACTCACGTAGACTTTTAAAAAGGTTGCTAACAACTCGT
* *
379675 CT--CCTT
190 GTGGCTTT
** * * * *
379681 TAAGCTTTTGAAAAGGTTGCTACCAACTCATGTAGGATTTTGAAAAGGTTGCCACCAACTTGTGT
1 TGGGCTTTTGAAAAGGTTGCTACCAACTCATGTAGGACTTTGAAAAGATTACCACCAACTCGTGT
* * * * * *
379746 GAGCTTTTGAAAAGGTTGCTAACAACTTATGTGGACTTAAAAAGGTTGTCACCAATTCATGTGGA
66 GAGCTTTTGAAAAGGTTACCAACAACTCATGTAGACTTAAAAAGGTTGCCACCAACTCATGTGGA
** * * * * * * *
379811 TTTTTCAAAAGGTTGCGACCAATTCTCGTAGACTTTTGAAAAGGTTGCTACCAACTCGTGTGGGC
131 TAATTCAAAAAGTTACCACCAACTCACGTAGACTTTTAAAAAGGTTGCTAACAACTCGTGT-GGC
379876 TTT
195 TTT
* * *
379879 TGGGCTTTTG-AAAGGTTGCTATCAACTCATGT-GGACTTTGGAATGATTACCACCAACTCGTGT
1 TGGGCTTTTGAAAAGGTTGCTACCAACTCATGTAGGACTTTGAAAAGATTACCACCAACTCGTGT
* * * * *
379942 GGGCCTTTT-AAAAGGTTACCACCAACTCGTGTAGACTTTGAAAAGGTTGCCACCAACTCGTGTA
66 GAG-CTTTTGAAAAGGTTACCAACAACTCATGTAGAC-TTAAAAAGGTTGCCACCAACTCATGT-
* * *
380006 GG-TAATTGAAAAAGTTACCACCAACTCACGTAGGCTTTTAAAAATGTTGAC-AACAACTCGTGT
128 GGATAATTCAAAAAGTTACCACCAACTCACGTAGACTTTTAAAAAGGTTG-CTAACAACTCGTGT
380069 GGCTTT
192 GGCTTT
380075 GAGAAGGTTA
Statistics
Matches: 313, Mismatches: 63, Indels: 30
0.77 0.16 0.07
Matches are distributed among these distances:
188 1 0.00
189 52 0.17
190 86 0.27
191 3 0.01
192 2 0.01
193 1 0.00
194 2 0.01
195 3 0.01
196 54 0.17
197 95 0.30
198 14 0.04
ACGTcount: A:0.28, C:0.20, G:0.21, T:0.31
Consensus pattern (197 bp):
TGGGCTTTTGAAAAGGTTGCTACCAACTCATGTAGGACTTTGAAAAGATTACCACCAACTCGTGT
GAGCTTTTGAAAAGGTTACCAACAACTCATGTAGACTTAAAAAGGTTGCCACCAACTCATGTGGA
TAATTCAAAAAGTTACCACCAACTCACGTAGACTTTTAAAAAGGTTGCTAACAACTCGTGTGGCT
TT
Found at i:380188 original size:157 final size:157
Alignment explanation
Indices: 379901--380190 Score: 349
Period size: 157 Copynumber: 1.8 Consensus size: 157
379891 AGGTTGCTAT
* *
379901 CAACTCATGTGGACTTTGGAATGATTACCACCAACTCGTGTGGGCCTTTTAAAAGGTTACCACCA
1 CAACTCATGTGGACTTTGGAATGATTACCACCAACTCGTATGGGACTTTTAAAAGGTTACCACCA
* * *
379966 ACTCGTGTAGACTTTGAAAAGGTTGCCACCAACTCGTGTAGGTAATTGAAAAAGTTACCACCAAC
66 ACTCGTGTAGACTTTGAAAAGGCTGCCACCAACTC-TATAGGGAATTGAAAAAGTTACCACCAAC
380031 TCACGTAGGCTTTTAAAAATGTTGACAA
130 TCACGTAGGCTTTTAAAAATGTTGACAA
* * *
380059 CAACTCGTGTGG-CTTTGAGAA-GGTTATCACCAACTCGTAT-GGACTTCTTAAAAGGTTACCAC
1 CAACTCATGTGGACTTTG-GAATGATTACCACCAACTCGTATGGGACTT-TTAAAAGGTTACCAC
* ** * *
380121 CAACTCGTGT-GGCTTTTGAAAAGGCTGTTACGAACT-TATATGGGATATT-AAAAATGTTGCCA
64 CAACTCGTGTAGAC-TTTGAAAAGGCTGCCACCAACTCTATA-GGGA-ATTGAAAAA-GTTACCA
*
380183 TCAACTCA
125 CCAACTCA
380191 TGTGAGATTT
Statistics
Matches: 112, Mismatches: 14, Indels: 13
0.81 0.10 0.09
Matches are distributed among these distances:
155 3 0.03
156 15 0.13
157 80 0.71
158 14 0.12
ACGTcount: A:0.31, C:0.21, G:0.20, T:0.29
Consensus pattern (157 bp):
CAACTCATGTGGACTTTGGAATGATTACCACCAACTCGTATGGGACTTTTAAAAGGTTACCACCA
ACTCGTGTAGACTTTGAAAAGGCTGCCACCAACTCTATAGGGAATTGAAAAAGTTACCACCAACT
CACGTAGGCTTTTAAAAATGTTGACAA
Found at i:380221 original size:157 final size:155
Alignment explanation
Indices: 379884--380232 Score: 336
Period size: 157 Copynumber: 2.2 Consensus size: 155
379874 GCTTTTGGGC
* * * *
379884 TTTTG-AAAGGTTGCTATCAACTCATGTGGACTTTGGAATGATTACCACCAACTCGTGTGGGCCT
1 TTTTGAAAAGGTTGCTCT-AACTCGTGTGG-CTTTGGAATGATTACCACCAACTCGTATGGGACT
* * *
379948 TTTAAAAGGTTACCACCAACTCGTGTAGACTTTGAAAAGGTTGCCACCAACTCGTGTAGGTAATT
64 TTTAAAAGGTTACCACCAACTCGTGTAGACTTTGAAAAGGCTGCCACCAACTC-TATAGGGAATT
*
380013 GAAAAAGTTACCACCAACTCACGTAGGC
128 GAAAAAGTTACCACCAACTCACGTAGGA
* * * * *
380041 TTTTAAAAATGTTGACAAC-AACTCGTGTGGCTTTGAGAA-GGTTATCACCAACTCGTAT-GGAC
1 TTTTGAAAAGGTTG-C-TCTAACTCGTGTGGCTTTG-GAATGATTACCACCAACTCGTATGGGAC
* ** *
380103 TTCTTAAAAGGTTACCACCAACTCGTGT-GGCTTTTGAAAAGGCTGTTACGAACT-TATATGGGA
63 TT-TTAAAAGGTTACCACCAACTCGTGTAGAC-TTTGAAAAGGCTGCCACCAACTCTATA-GGGA
* * *
380166 TATT-AAAAATGTTGCCATCAACTCATGT-GAGA
125 -ATTGAAAAA-GTTACCACCAACTCACGTAG-GA
380198 TTTTGAAAAGGTTGCTGCTAACTCGTGTGGGCTTT
1 TTTTGAAAAGGTTGCT-CTAACTCGTGT-GGCTTT
380233 TGACAAAGTT
Statistics
Matches: 156, Mismatches: 23, Indels: 25
0.76 0.11 0.12
Matches are distributed among these distances:
155 3 0.02
156 18 0.12
157 108 0.69
158 26 0.17
159 1 0.01
ACGTcount: A:0.29, C:0.19, G:0.21, T:0.31
Consensus pattern (155 bp):
TTTTGAAAAGGTTGCTCTAACTCGTGTGGCTTTGGAATGATTACCACCAACTCGTATGGGACTTT
TAAAAGGTTACCACCAACTCGTGTAGACTTTGAAAAGGCTGCCACCAACTCTATAGGGAATTGAA
AAAGTTACCACCAACTCACGTAGGA
Found at i:380938 original size:71 final size:71
Alignment explanation
Indices: 380807--380944 Score: 188
Period size: 71 Copynumber: 1.9 Consensus size: 71
380797 CTCTTCTAGA
* * * * *
380807 CTTTTGAAAAGGTTGCCACCAACTCGTGTGGACTTTGAAATGGTTTCCACTAATTCGTGTGGGCT
1 CTTTTGAAAAAGTTGCCACCAACTCGTGTGGACTTTGAAATGGTTGCCACTAACTAGTGTGGACT
380872 TTTGGG
66 TTTGGG
* * *
380878 CTTTTGAAAAAGTTGCCACCAACTCTTGTGGACTTTTGAAA-GGTTGGCATTAACTAGTGTGGAC
1 CTTTTGAAAAAGTTGCCACCAACTCGTGTGGAC-TTTGAAATGGTTGCCACTAACTAGTGTGGAC
380942 TTT
65 TTT
380945 GAAATAGTTA
Statistics
Matches: 58, Mismatches: 8, Indels: 2
0.85 0.12 0.03
Matches are distributed among these distances:
71 51 0.88
72 7 0.12
ACGTcount: A:0.22, C:0.17, G:0.25, T:0.36
Consensus pattern (71 bp):
CTTTTGAAAAAGTTGCCACCAACTCGTGTGGACTTTGAAATGGTTGCCACTAACTAGTGTGGACT
TTTGGG
Found at i:381412 original size:125 final size:128
Alignment explanation
Indices: 381238--381519 Score: 333
Period size: 125 Copynumber: 2.2 Consensus size: 128
381228 AGTTGTCATT
* * * * * * *
381238 AACTTGTGTGGACTTTTGAAAAAGTTTCTAATAACTTGTGTGGAGTTTGAAAAGGTTGTCACTAA
1 AACTTATGTGGGCTTTTGAAAAGGTTGCTAACAACTTATGTGGACTTTGAAAAGGTTGTCACTAA
*
381303 CTC-TGT-GG-TTTTT-GAAAAGGTTGCTACCAACT-CGTATGT-GATTTTGAAAAGATTACTAC
66 CTCGTGTGGGCTTTTTAGAAAAGGTTG---CCAACTACGTATGTAGACTTTGAAAAGATTACTAC
381362 C
128 C
* *
381363 AACTTATGTGGGCTTTTGAAAAGGTTGCTAACAACTTATGTTGACTTTGAAAAGGTTGTTACTAA
1 AACTTATGTGGGCTTTTGAAAAGGTTGCTAACAACTTATGTGGACTTTGAAAAGGTTGTCACTAA
* * * **
381428 CTCGTGTGGGCTTTTTAAAGAAAAGGTTGCCAACTACTTGTGTAGACTTTGAAAAGGTTGTTACC
66 CTCGTGTGGGCTTTTT--AGAAAAGGTTGCCAACTACGTATGTAGACTTTGAAAAGATTACTACC
*
381493 AACTCATGTGGGCTTTTGAAAAGGTTG
1 AACTTATGTGGGCTTTTGAAAAGGTTG
381520 TCCCTAACTC
Statistics
Matches: 133, Mismatches: 16, Indels: 11
0.83 0.10 0.07
Matches are distributed among these distances:
125 59 0.44
126 3 0.02
127 2 0.02
128 11 0.08
129 5 0.04
130 43 0.32
131 10 0.08
ACGTcount: A:0.28, C:0.13, G:0.23, T:0.36
Consensus pattern (128 bp):
AACTTATGTGGGCTTTTGAAAAGGTTGCTAACAACTTATGTGGACTTTGAAAAGGTTGTCACTAA
CTCGTGTGGGCTTTTTAGAAAAGGTTGCCAACTACGTATGTAGACTTTGAAAAGATTACTACC
Found at i:382618 original size:94 final size:95
Alignment explanation
Indices: 382475--382700 Score: 251
Period size: 94 Copynumber: 2.4 Consensus size: 95
382465 AGATTACCAG
** ** * * *
382475 CAACTCGTGTGGGCTTTTGAAAATATTA-CATCCAACTCGTGTAGACTTTGACTATGGTGCTATA
1 CAACTCGTGTGGGCTTTTGAAAAGGTTACCA-CCAACTCGTGTAGACTTTGAAAATCGTGCCACA
* * *
382539 AACTCGTGTGAAC-TTTG-TAAAGGTTGCCAC
65 AACACATGTGAACTTTTGCAAAAGG-TGCCAC
* * * * * *
382569 CAACTCCTGTGGGCTTTTGAAAAGGTTACCAACAACTCGTTTGGGCTTTGAAAATCGTGCCACCA
1 CAACTCGTGTGGGCTTTTGAAAAGGTTACCACCAACTCGTGTAGACTTTGAAAATCGTGCCACAA
*
382634 ACACATGTGCACTTTTGCAAAAGGTGCCAC
66 ACACATGTGAACTTTTGCAAAAGGTGCCAC
*
382664 CAACTCGTGTGCGCTTTTGAAAAGGTTACCACCAACT
1 CAACTCGTGTGGGCTTTTGAAAAGGTTACCACCAACT
382701 TATCTGAGAT
Statistics
Matches: 109, Mismatches: 20, Indels: 5
0.81 0.15 0.04
Matches are distributed among these distances:
94 58 0.53
95 46 0.42
96 5 0.05
ACGTcount: A:0.27, C:0.23, G:0.21, T:0.29
Consensus pattern (95 bp):
CAACTCGTGTGGGCTTTTGAAAAGGTTACCACCAACTCGTGTAGACTTTGAAAATCGTGCCACAA
ACACATGTGAACTTTTGCAAAAGGTGCCAC
Found at i:384264 original size:102 final size:103
Alignment explanation
Indices: 384082--384267 Score: 248
Period size: 102 Copynumber: 1.8 Consensus size: 103
384072 AAAGGTTACT
* **
384082 ACCAACTCTTGTAGACTTTTCAAAAGGTTGCCACCAACTCATGTAGACATTGAAATAGTGGCTTC
1 ACCAACTCTTGTAGACTTTTCAAAAGGTTGCCACCAACTCATGTAGACATTCAAATAGTGGCCAC
**
384147 CAACTTTTATGGGCTTTTGGGCTTTTAAAACGGATGCC
66 CAACTCGTATGGGCTTTTGGGCTTTTAAAACGGATGCC
* * * * * *
384185 ACCAACTCTTGTAGACTTTT-GAAAGGTTGCCATCAACTTATGTGGACATTCAAATGGTTGCCAC
1 ACCAACTCTTGTAGACTTTTCAAAAGGTTGCCACCAACTCATGTAGACATTCAAATAGTGGCCAC
* *
384249 TAACTCGTGTGGGCTTTTG
66 CAACTCGTATGGGCTTTTG
384268 AAAAGGTTAC
Statistics
Matches: 70, Mismatches: 13, Indels: 1
0.83 0.15 0.01
Matches are distributed among these distances:
102 50 0.71
103 20 0.29
ACGTcount: A:0.26, C:0.21, G:0.20, T:0.33
Consensus pattern (103 bp):
ACCAACTCTTGTAGACTTTTCAAAAGGTTGCCACCAACTCATGTAGACATTCAAATAGTGGCCAC
CAACTCGTATGGGCTTTTGGGCTTTTAAAACGGATGCC
Found at i:385303 original size:102 final size:103
Alignment explanation
Indices: 385119--385309 Score: 262
Period size: 102 Copynumber: 1.9 Consensus size: 103
385109 CTAACTCGCG
* *
385119 TGGGCTTTTGAAAAAGTTGCTACCAACTCTTGAAGACTTTTAAAAAAGTTATCATCAACTCGTGT
1 TGGGCTATTGAAAAAGTTGCCACCAACTCTTGAAGACTTTTAAAAAAGTTATCATCAACTCGTGT
* *
385184 GGGCTTTGAAATGGTTACCACCAATTTGTGTGGGCTTT
66 GGACTTTGAAATAGTTACCACCAATTTGTGTGGGCTTT
* * * * *
385222 TGGGCTATTGAAAAGGTTGCCACCAACT-TTTACAGACTTTT-GAAAGGTT-GCTATCAACTCGT
1 TGGGCTATTGAAAAAGTTGCCACCAACTCTTGA-AGACTTTTAAAAAAGTTATC-ATCAACTCGT
385284 GTGGACTTTGAAATAGTTACCACCAA
64 GTGGACTTTGAAATAGTTACCACCAA
385310 CTCGTGTGAA
Statistics
Matches: 77, Mismatches: 9, Indels: 5
0.85 0.10 0.05
Matches are distributed among these distances:
101 1 0.01
102 43 0.56
103 33 0.43
ACGTcount: A:0.28, C:0.18, G:0.21, T:0.33
Consensus pattern (103 bp):
TGGGCTATTGAAAAAGTTGCCACCAACTCTTGAAGACTTTTAAAAAAGTTATCATCAACTCGTGT
GGACTTTGAAATAGTTACCACCAATTTGTGTGGGCTTT
Found at i:386168 original size:66 final size:66
Alignment explanation
Indices: 385971--386218 Score: 260
Period size: 66 Copynumber: 3.9 Consensus size: 66
385961 AAAAAGTTTT
** * * * * *
385971 TAACAACTTGTGTAAAGTTTGAAAAGGTTGTCACCAACTC-TAT-GG-TTTTT--GAAAAGGTTG
1 TAACAACTTGTGTTGACTTTGAAAAGGTTATTACCAACTCATGTGGGCTTTTTAAAAAAAGGTTG
386031 C
66 C
* * * * *
386032 TACCAACTCGTGTGTGATTTTGAAAAGGTTACTACCAACTCATGTGGGC-TTTT--GAAAAGGTT
1 TAACAACTTGTGT-TGACTTTGAAAAGGTTATTACCAACTCATGTGGGCTTTTTAAAAAAAGGTT
386094 GC
65 GC
* *
386096 TAACAACTTATGTTGACTTTGAAAAGGTTATTACTAACTCATGTGGGCTTTTTAAAAAAAGGTTG
1 TAACAACTTGTGTTGACTTTGAAAAGGTTATTACCAACTCATGTGGGCTTTTTAAAAAAAGGTTG
386161 C
66 C
* * * * *
386162 CAACAACTTGTGTAGACTTTGAAAAGGTTGTTACCAACTCGTGTGGGCTTTTGAAAA
1 TAACAACTTGTGTTGACTTTGAAAAGGTTATTACCAACTCATGTGGGCTTTTTAAAA
386219 GGTGGACCCT
Statistics
Matches: 157, Mismatches: 23, Indels: 9
0.83 0.12 0.05
Matches are distributed among these distances:
61 11 0.07
62 21 0.13
63 34 0.22
64 31 0.20
66 60 0.38
ACGTcount: A:0.30, C:0.15, G:0.21, T:0.34
Consensus pattern (66 bp):
TAACAACTTGTGTTGACTTTGAAAAGGTTATTACCAACTCATGTGGGCTTTTTAAAAAAAGGTTG
C
Found at i:387977 original size:71 final size:71
Alignment explanation
Indices: 387861--387999 Score: 181
Period size: 71 Copynumber: 2.0 Consensus size: 71
387851 CTCTTCTAGA
* * * * *
387861 CTTTTGAAAAGGTTGTCACCAACCCATATGGACTTTGAAATGGTTGTCACTAATTCGTGTGGGCT
1 CTTTTGAAAAGGTTGCCACCAACCCATATGAACTTTGAAATGGTTGGCACTAACTCGTGTGGACT
387926 TTTGGG
66 TTTGGG
* * * *
387932 CTTTTGAAAAGGTTGCCACCAACTCTTGTGAACTTTTGAAA-GGTTGGCATTAACTCGTGTGGAC
1 CTTTTGAAAAGGTTGCCACCAACCCATATGAAC-TTTGAAATGGTTGGCACTAACTCGTGTGGAC
387996 TTTT
65 TTTT
388000 ATAGTTACCA
Statistics
Matches: 58, Mismatches: 9, Indels: 2
0.84 0.13 0.03
Matches are distributed among these distances:
71 51 0.88
72 7 0.12
ACGTcount: A:0.23, C:0.17, G:0.24, T:0.36
Consensus pattern (71 bp):
CTTTTGAAAAGGTTGCCACCAACCCATATGAACTTTGAAATGGTTGGCACTAACTCGTGTGGACT
TTTGGG
Found at i:388636 original size:40 final size:40
Alignment explanation
Indices: 388562--388637 Score: 100
Period size: 40 Copynumber: 1.9 Consensus size: 40
388552 CTCTGTGGAC
** * *
388562 TTTGAAATGGTTGCCACCAATTCGTAGGGGCTTTTGGGCT
1 TTTGAAAAAGTTGCCACCAACTCGTAGGGACTTTTGGGCT
388602 TTTGAAAAAGTTGCCACCAACTCGT-GTGGACTTTTG
1 TTTGAAAAAGTTGCCACCAACTCGTAG-GGACTTTTG
388638 AACTGTTGGC
Statistics
Matches: 31, Mismatches: 4, Indels: 2
0.84 0.11 0.05
Matches are distributed among these distances:
39 1 0.03
40 30 0.97
ACGTcount: A:0.21, C:0.18, G:0.26, T:0.34
Consensus pattern (40 bp):
TTTGAAAAAGTTGCCACCAACTCGTAGGGACTTTTGGGCT
Found at i:388681 original size:102 final size:102
Alignment explanation
Indices: 388496--388688 Score: 235
Period size: 102 Copynumber: 1.9 Consensus size: 102
388486 AACTCGTCTA
* * * *
388496 GGCTTTTGAAAAGGTTGCCACCAATTCTTCTAGACCTTTGAAAAGGTTGCCACCAACTCTGTGGA
1 GGCTTTTGAAAAAGTTGCCACCAACTCGTCTAGACCTTTGAAAAGGTTGCCACCAACTCTGTAGA
* * *
388561 CTTTGAAATGGTTGCCACCAATTCGTAGGGGCTTTTG
66 CTTTGAAATAGTTACCACCAACTCGTAGGGGCTTTTG
* * * ** * **
388598 GGCTTTTGAAAAAGTTGCCACCAACTCGTGTGGACTTTTG-AACTGTTGGCATGAACTCGTGTAG
1 GGCTTTTGAAAAAGTTGCCACCAACTCGTCTAGACCTTTGAAAAGGTTGCCACCAACTC-TGTAG
388662 ACTTTGAAATAGTTACCACCAACTCGT
65 ACTTTGAAATAGTTACCACCAACTCGT
388689 GTGGATTTTT
Statistics
Matches: 75, Mismatches: 15, Indels: 2
0.82 0.16 0.02
Matches are distributed among these distances:
101 13 0.17
102 62 0.83
ACGTcount: A:0.25, C:0.21, G:0.23, T:0.31
Consensus pattern (102 bp):
GGCTTTTGAAAAAGTTGCCACCAACTCGTCTAGACCTTTGAAAAGGTTGCCACCAACTCTGTAGA
CTTTGAAATAGTTACCACCAACTCGTAGGGGCTTTTG
Found at i:391203 original size:102 final size:102
Alignment explanation
Indices: 391065--391315 Score: 457
Period size: 102 Copynumber: 2.5 Consensus size: 102
391055 TGGACATTAA
* * *
391065 AAAGGTTGCCACCAACTCATGTGGACTTTAAAATAGTTGCCACCAACCAGTGCGGGCTTTTGGGC
1 AAAGGTTGCTATCAACTCATGTGGACTTTGAAATAGTTGCCACCAACCAGTGCGGGCTTTTGGGC
391130 TTTTGAAAAGTTTGCCACTAACTCTTGTGGACTTTTG
66 TTTTGAAAAGTTTGCCACTAACTCTTGTGGACTTTTG
391167 AAAGGTTGCTATCAACTCATGTGGACTTTGAAATAGTTGCCACCAACCAGTGCGGGCTTTTGGGC
1 AAAGGTTGCTATCAACTCATGTGGACTTTGAAATAGTTGCCACCAACCAGTGCGGGCTTTTGGGC
391232 TTTTGAAAAGTTTGCCACTAACTCTTGTGGACTTTTG
66 TTTTGAAAAGTTTGCCACTAACTCTTGTGGACTTTTG
* *
391269 AAAGGTTGCTATCAACTCGTGTGGACTTTGAAATGGTTGCCACCAAC
1 AAAGGTTGCTATCAACTCATGTGGACTTTGAAATAGTTGCCACCAAC
391316 TCGTGTGAGC
Statistics
Matches: 144, Mismatches: 5, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
102 144 1.00
ACGTcount: A:0.25, C:0.21, G:0.23, T:0.31
Consensus pattern (102 bp):
AAAGGTTGCTATCAACTCATGTGGACTTTGAAATAGTTGCCACCAACCAGTGCGGGCTTTTGGGC
TTTTGAAAAGTTTGCCACTAACTCTTGTGGACTTTTG
Found at i:394448 original size:71 final size:71
Alignment explanation
Indices: 394332--394464 Score: 171
Period size: 71 Copynumber: 1.9 Consensus size: 71
394322 TATTTGTAGA
* *
394332 CTTTTGAAAAGGTTAACACCAACTCGTGTGGACTTTGAAATGGTTGCCACCAACTCGTGTGGGCT
1 CTTTTGAAAAGGTTAACACCAACTCGTATGGACTTTGAAAAGGTTGCCACCAACTCGTGTGGGCT
394397 TTTGGG
66 TTTGGG
** * * *
394403 CTTTTGAAAA-GTTTGCTACCAACTCTTATGGACTTCT-AAAAGGTTGCTATCAACTCGTGTGG
1 CTTTTGAAAAGGTTAAC-ACCAACTCGTATGGACTT-TGAAAAGGTTGCCACCAACTCGTGTGG
394465 ATTTTGAAAT
Statistics
Matches: 53, Mismatches: 7, Indels: 4
0.83 0.11 0.06
Matches are distributed among these distances:
70 4 0.08
71 48 0.91
72 1 0.02
ACGTcount: A:0.24, C:0.20, G:0.23, T:0.33
Consensus pattern (71 bp):
CTTTTGAAAAGGTTAACACCAACTCGTATGGACTTTGAAAAGGTTGCCACCAACTCGTGTGGGCT
TTTGGG
Found at i:394473 original size:165 final size:166
Alignment explanation
Indices: 394239--394720 Score: 410
Period size: 165 Copynumber: 3.0 Consensus size: 166
394229 TCGTATGGCA
394239 TTTTGAAAAGGTTGCCAACAACTTGTATGGACTTTGAAAAGGTTGTCATCAACTCGTGTGGACTT
1 TTTTGAAAAGGTTGCCAACAACTTGTATGGACTTTGAAAAGGTTGTCATCAACTCGTGTGGACTT
* ** * * *
394304 TGAAAAGGTTGCCACGAA-TATTTGT-AGACTTTTGAAAAGGTTAACACCAACTCGTGTG-GAC-
66 TGAAAAGGTTGCCACCAACT-CGTGTAAG-CCTTTAAAAAGGTTAACACCAAATCGTGTGAG-CT
*
394365 TTTGAAATGGTTGCCACCAACTCGTGTGGGCTTTTGGGC
128 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGGGC
* * *
394404 TTTTGAAAAGTTTGCTACCAACTCT-TATGGACTTCT-AAAAGGTTG-CTATCAACTCGTGTGGA
1 TTTTGAAAAGGTTGCCAACAACT-TGTATGGACTT-TGAAAAGGTTGTC-ATCAACTCGTGTGGA
* * * * *
394466 TTTTGAAATGGTTTCCACCAACTCGTGTAAGCCTTTAAAAAGTTTACCACCAAATCGTGTGAGCT
63 CTTTGAAAAGGTTGCCACCAACTCGTGTAAGCCTTTAAAAAGGTTAACACCAAATCGTGTGAGCT
*
394531 TTTGAAAAGGTTGCCACCAACTC--GT--G----TGGAC
128 TTTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGGGC
* * * * * * ** ** *
394562 -ATTGAAAAGGTTGCCACCAACTAGTTTGGGCTTCTTAAAATCTTACCACCAACTCGTGTGGACT
1 TTTTGAAAAGGTTGCCAACAACTTGTATGGACTT-TGAAAAGGTTGTCATCAACTCGTGTGGACT
* * * * * * * * *
394626 TTGAAAAGGTTACCACTAACTCGTGT-GGGCTTTGAAAAGGTT-GCCCCAACTCATGTG-GAC-T
65 TTGAAAAGGTTGCCACCAACTCGTGTAAGCCTTTAAAAAGGTTAACACCAAATCGTGTGAG-CTT
* *
394687 TTGAAAAGGTTGCCATCAACCCGTGTGGGCTTTT
129 TTGAAAAGGTTGCCACCAACTCGTGTGGGCTTTT
394721 AAAAAAGCTG
Statistics
Matches: 258, Mismatches: 40, Indels: 40
0.76 0.12 0.12
Matches are distributed among these distances:
155 22 0.09
156 12 0.05
157 42 0.16
158 48 0.19
159 2 0.01
162 1 0.00
163 1 0.00
164 3 0.01
165 99 0.38
166 28 0.11
ACGTcount: A:0.27, C:0.20, G:0.22, T:0.31
Consensus pattern (166 bp):
TTTTGAAAAGGTTGCCAACAACTTGTATGGACTTTGAAAAGGTTGTCATCAACTCGTGTGGACTT
TGAAAAGGTTGCCACCAACTCGTGTAAGCCTTTAAAAAGGTTAACACCAAATCGTGTGAGCTTTT
GAAAAGGTTGCCACCAACTCGTGTGGGCTTTTGGGC
Found at i:394906 original size:157 final size:156
Alignment explanation
Indices: 394607--394977 Score: 494
Period size: 157 Copynumber: 2.4 Consensus size: 156
394597 TAAAATCTTA
*
394607 CCACCAACTCGTGTGGACTTTGAAAAGGTTACCACTAACTCGTGTGGGCTTTGAAAAGGTTGCCC
1 CCACCAACTCGTGTGGACTTTGAAAAGGTTGCCACTAACTCGTGTGGGCTTTGAAAAGGTTGCCC
* * *
394672 CAACTCATGTGGACTTTGAAAAGGTTGCCATCAACCCGTGTGGGCTTTTAAAAAAGCTGCCAACA
66 CAACTCATGTGGACATTGAAAAGGTTACCATCAACCCGTGTGGGCTTTTAAAAAAGCTACCAACA
* *
394737 ACTAGTGCAGGCTTTTGAAAAGATTG
131 ACTAGTGCAGGCTTTTAAAAAGACTG
* * * **
394763 CCACCAACTCATGTGGACTTTGAAATGGTTGCCACTAACTTGTGTGTTCTTTGAAAAGGTTGCCA
1 CCACCAACTCGTGTGGACTTTGAAAAGGTTGCCACTAACTCGTGTGGGCTTTGAAAAGGTTGCC-
** * * * *
394828 CCAACTCATGTGGACATTGAAAAGGTTACCATCAACTGGTGTGGGCTTTTAAAAATGTTATCATC
65 CCAACTCATGTGGACATTGAAAAGGTTACCATCAACCCGTGTGGGCTTTTAAAAAAGCTACCAAC
* * *
394893 AACTCGTGTAGGCTTTTAAAAAGGCTG
130 AACTAGTGCAGGCTTTTAAAAAGACTG
* *
394920 CCACCAACTCGTGTAGG-CTTTTGAAAAGGTTGCCAAC-AACTCATGTGGGCTTTCAAAA
1 CCACCAACTCGTGT-GGAC-TTTGAAAAGGTTGCC-ACTAACTCGTGTGGGCTTTGAAAA
394978 ATATTACCAC
Statistics
Matches: 184, Mismatches: 27, Indels: 6
0.85 0.12 0.03
Matches are distributed among these distances:
156 58 0.32
157 92 0.50
158 32 0.17
159 2 0.01
ACGTcount: A:0.28, C:0.21, G:0.22, T:0.28
Consensus pattern (156 bp):
CCACCAACTCGTGTGGACTTTGAAAAGGTTGCCACTAACTCGTGTGGGCTTTGAAAAGGTTGCCC
CAACTCATGTGGACATTGAAAAGGTTACCATCAACCCGTGTGGGCTTTTAAAAAAGCTACCAACA
ACTAGTGCAGGCTTTTAAAAAGACTG
Found at i:395512 original size:71 final size:71
Alignment explanation
Indices: 395396--395533 Score: 179
Period size: 71 Copynumber: 1.9 Consensus size: 71
395386 CTCTTCTAAA
* * * * *
395396 CTTTTGAAAAGGTTGCCACCAACTCATGTAGACTTTGAAATGGTTGCCACCAATTCGTGTGGGCT
1 CTTTTGAAAAGGCTGCCACAAACTCATATAGACTTTGAAATGGTTGCCACCAACTCGTGTGGACT
395461 TTTGGG
66 TTTGGG
* * * *
395467 CTTTTGAAAAGGCTGCCATAAACTCTTATGGACTTTTGAAA-GGTTGCCATCAACTCGTGTGGAC
1 CTTTTGAAAAGGCTGCCACAAACTCATATAGAC-TTTGAAATGGTTGCCACCAACTCGTGTGGAC
395531 TTT
65 TTT
395534 GAAAAAGTTA
Statistics
Matches: 57, Mismatches: 9, Indels: 2
0.84 0.13 0.03
Matches are distributed among these distances:
71 50 0.88
72 7 0.12
ACGTcount: A:0.24, C:0.20, G:0.23, T:0.33
Consensus pattern (71 bp):
CTTTTGAAAAGGCTGCCACAAACTCATATAGACTTTGAAATGGTTGCCACCAACTCGTGTGGACT
TTTGGG
Found at i:395548 original size:102 final size:103
Alignment explanation
Indices: 395363--395558 Score: 259
Period size: 102 Copynumber: 1.9 Consensus size: 103
395353 ACTCATGTGA
* * *
395363 GCTTTTGAAAAGGTTACCACCAACTCTTCTAAACTTTTGAAAAGGTTGCCACCAACTCATGTAGA
1 GCTTTTGAAAAGGCTACCACAAACTCTTATAAACTTTTGAAAAGGTTGCCACCAACTCATGTAGA
** * *
395428 CTTTGAAATGGTTGCCACCAATTCGTGTGGGCTTTTGG
66 CTTTGAAAAAGTTACCACCAACTCGTGTGGGCTTTTGG
* * ** * * *
395466 GCTTTTGAAAAGGCTGCCATAAACTCTTATGGACTTTTG-AAAGGTTGCCATCAACTCGTGTGGA
1 GCTTTTGAAAAGGCTACCACAAACTCTTATAAACTTTTGAAAAGGTTGCCACCAACTCATGTAGA
395530 CTTTGAAAAAGTTACCACCAACTCGTGTG
66 CTTTGAAAAAGTTACCACCAACTCGTGTG
395559 AATTTTTGAA
Statistics
Matches: 79, Mismatches: 14, Indels: 1
0.84 0.15 0.01
Matches are distributed among these distances:
102 47 0.59
103 32 0.41
ACGTcount: A:0.27, C:0.21, G:0.21, T:0.31
Consensus pattern (103 bp):
GCTTTTGAAAAGGCTACCACAAACTCTTATAAACTTTTGAAAAGGTTGCCACCAACTCATGTAGA
CTTTGAAAAAGTTACCACCAACTCGTGTGGGCTTTTGG
Found at i:395658 original size:197 final size:198
Alignment explanation
Indices: 395303--395659 Score: 470
Period size: 197 Copynumber: 1.8 Consensus size: 198
395293 CGTGCGGGCA
* * ** *
395303 TTTGAAAAGGTTACCAACAACTTGTGTGGACTTTGAAAAGGTTGTCACCAACTCATGTGAGCTTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGACTTTGAAAAAGTTACCACCAACTCATGTGAACTTT
* * *
395368 TGAAAAGGTTACCACCAACTCTTCTAAACTTTTGAAAAGGTTGCCACCAACTCATGTAGACTTTG
66 TGAAAAGGTTACCACCAACTCATCTAAACTTTTGAAAAGGTTCCCACCAACTCATATAGACTTTG
*
395433 AAATGGTTGCCACCAATTCGTGTGGGCTTTTGGGCTTTTGAAAAGGCTGCCATAAACTCTTATGG
131 AAATGGTTGCCACCAACTCGTGTGGGCTTTTGGGCTTTTGAAAAGGCTGCCATAAACTCTTATGG
395498 ACT
196 ACT
* * * *
395501 TTTG-AAAGGTTGCCATCAACTCGTGTGGACTTTGAAAAAGTTACCACCAACTCGTGTGAATTTT
1 TTTGAAAAGGTTACCAACAACTCGTGTGGACTTTGAAAAAGTTACCACCAACTCATGTGAACTTT
* * * * * *
395565 TGAAAAGGTTGCTACCAACTCATGTAGATTTTTGAAAAGGTTCCCACCAACTCCTATCAG-CTTT
66 TGAAAAGGTTACCACCAACTCATCTAAACTTTTGAAAAGGTTCCCACCAACTCATAT-AGACTTT
* *
395629 TACAA-GGTTGCCGA-CAACTCGTTTGGGCTTT
130 GA-AATGGTTGCC-ACCAACTCGTGTGGGCTTT
395660 GGAAAAGGTT
Statistics
Matches: 135, Mismatches: 21, Indels: 7
0.83 0.13 0.04
Matches are distributed among these distances:
197 126 0.93
198 9 0.07
ACGTcount: A:0.28, C:0.20, G:0.20, T:0.32
Consensus pattern (198 bp):
TTTGAAAAGGTTACCAACAACTCGTGTGGACTTTGAAAAAGTTACCACCAACTCATGTGAACTTT
TGAAAAGGTTACCACCAACTCATCTAAACTTTTGAAAAGGTTCCCACCAACTCATATAGACTTTG
AAATGGTTGCCACCAACTCGTGTGGGCTTTTGGGCTTTTGAAAAGGCTGCCATAAACTCTTATGG
ACT
Found at i:400520 original size:13 final size:13
Alignment explanation
Indices: 400502--400526 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
400492 CATTTTATGG
400502 TGTATCGATACAA
1 TGTATCGATACAA
400515 TGTATCGATACA
1 TGTATCGATACA
400527 TACTATGTGT
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.36, C:0.16, G:0.16, T:0.32
Consensus pattern (13 bp):
TGTATCGATACAA
Found at i:400542 original size:32 final size:33
Alignment explanation
Indices: 400479--400546 Score: 102
Period size: 33 Copynumber: 2.1 Consensus size: 33
400469 CATTACAAGC
**
400479 CAATGTATCAATACATTTTATGGTGTATCGATA
1 CAATGTATCAATACATACTATGGTGTATCGATA
*
400512 CAATGTATCGATACATACTAT-GTGTATCGATA
1 CAATGTATCAATACATACTATGGTGTATCGATA
400544 CAA
1 CAA
400547 GTTTAGCTAC
Statistics
Matches: 32, Mismatches: 3, Indels: 1
0.89 0.08 0.03
Matches are distributed among these distances:
32 14 0.44
33 18 0.56
ACGTcount: A:0.35, C:0.15, G:0.15, T:0.35
Consensus pattern (33 bp):
CAATGTATCAATACATACTATGGTGTATCGATA
Found at i:401279 original size:43 final size:43
Alignment explanation
Indices: 401215--401301 Score: 165
Period size: 43 Copynumber: 2.0 Consensus size: 43
401205 TCCCCCTTAA
401215 TCATAAGCACTTATCTCTTTCTCCCCCTTAATCAAAAATTTAT
1 TCATAAGCACTTATCTCTTTCTCCCCCTTAATCAAAAATTTAT
*
401258 TCATAAGCACTTATCTTTTTCTCCCCCTTAATCAAAAATTTAT
1 TCATAAGCACTTATCTCTTTCTCCCCCTTAATCAAAAATTTAT
401301 T
1 T
401302 TGCACATATA
Statistics
Matches: 43, Mismatches: 1, Indels: 0
0.98 0.02 0.00
Matches are distributed among these distances:
43 43 1.00
ACGTcount: A:0.30, C:0.26, G:0.02, T:0.41
Consensus pattern (43 bp):
TCATAAGCACTTATCTCTTTCTCCCCCTTAATCAAAAATTTAT
Found at i:402960 original size:21 final size:20
Alignment explanation
Indices: 402916--402962 Score: 60
Period size: 22 Copynumber: 2.3 Consensus size: 20
402906 TTTGAAGATG
*
402916 ATTTTGATGAAAAACAATGT
1 ATTTTGATGAAAAACAATGA
402936 ATTTTGAAGTGAAAAACAA-GA
1 ATTTTG-A-TGAAAAACAATGA
402957 ATTTTG
1 ATTTTG
402963 CAAAAGATTT
Statistics
Matches: 24, Mismatches: 1, Indels: 3
0.86 0.04 0.11
Matches are distributed among these distances:
20 6 0.25
21 8 0.33
22 10 0.42
ACGTcount: A:0.45, C:0.04, G:0.17, T:0.34
Consensus pattern (20 bp):
ATTTTGATGAAAAACAATGA
Found at i:409195 original size:13 final size:13
Alignment explanation
Indices: 409177--409201 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
409167 CATTTTATGG
409177 TGTATCGATACAA
1 TGTATCGATACAA
409190 TGTATCGATACA
1 TGTATCGATACA
409202 TACTATGTGT
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.36, C:0.16, G:0.16, T:0.32
Consensus pattern (13 bp):
TGTATCGATACAA
Found at i:409217 original size:32 final size:33
Alignment explanation
Indices: 409154--409221 Score: 102
Period size: 33 Copynumber: 2.1 Consensus size: 33
409144 CGTTACAAGC
**
409154 CAATGTATCAATACATTTTATGGTGTATCGATA
1 CAATGTATCAATACATACTATGGTGTATCGATA
*
409187 CAATGTATCGATACATACTAT-GTGTATCGATA
1 CAATGTATCAATACATACTATGGTGTATCGATA
409219 CAA
1 CAA
409222 GTTTAGCTAC
Statistics
Matches: 32, Mismatches: 3, Indels: 1
0.89 0.08 0.03
Matches are distributed among these distances:
32 14 0.44
33 18 0.56
ACGTcount: A:0.35, C:0.15, G:0.15, T:0.35
Consensus pattern (33 bp):
CAATGTATCAATACATACTATGGTGTATCGATA
Found at i:418468 original size:30 final size:29
Alignment explanation
Indices: 418403--418467 Score: 112
Period size: 29 Copynumber: 2.2 Consensus size: 29
418393 AAAGTATAAA
418403 TTTTTTTCCCAACTTCAATCTTTTTCCTC
1 TTTTTTTCCCAACTTCAATCTTTTTCCTC
* *
418432 TTTTTTTCCCAACTTCAATCTTTTTTCTT
1 TTTTTTTCCCAACTTCAATCTTTTTCCTC
418461 TTTTTTT
1 TTTTTTT
418468 TTTGGGTTAA
Statistics
Matches: 34, Mismatches: 2, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
29 34 1.00
ACGTcount: A:0.12, C:0.25, G:0.00, T:0.63
Consensus pattern (29 bp):
TTTTTTTCCCAACTTCAATCTTTTTCCTC
Found at i:419535 original size:2 final size:2
Alignment explanation
Indices: 419524--419560 Score: 65
Period size: 2 Copynumber: 18.5 Consensus size: 2
419514 TACACACACG
*
419524 TA TA TG TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA T
1 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA T
419561 TATTTTTAAA
Statistics
Matches: 33, Mismatches: 2, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
2 33 1.00
ACGTcount: A:0.46, C:0.00, G:0.03, T:0.51
Consensus pattern (2 bp):
TA
Found at i:421538 original size:16 final size:17
Alignment explanation
Indices: 421512--421559 Score: 55
Period size: 17 Copynumber: 2.9 Consensus size: 17
421502 TATACTTAAT
421512 TAAATTATAAAAAATTTA
1 TAAATT-TAAAAAATTTA
*
421530 -AAATTT-AAAATTTTA
1 TAAATTTAAAAAATTTA
*
421545 TAAATATAAAAAATT
1 TAAATTTAAAAAATT
421560 AAATTCGATT
Statistics
Matches: 25, Mismatches: 3, Indels: 5
0.76 0.09 0.15
Matches are distributed among these distances:
15 8 0.32
16 6 0.24
17 11 0.44
ACGTcount: A:0.60, C:0.00, G:0.00, T:0.40
Consensus pattern (17 bp):
TAAATTTAAAAAATTTA
Found at i:421853 original size:23 final size:23
Alignment explanation
Indices: 421810--421854 Score: 56
Period size: 23 Copynumber: 2.0 Consensus size: 23
421800 TTTTTTTTTG
**
421810 TTGTTAATATATTATTGATATAA
1 TTGTTAATATATTATAAATATAA
421833 TTGTATAATA-ATTATAAATATA
1 TTGT-TAATATATTATAAATATA
421855 TTTTTCATTA
Statistics
Matches: 19, Mismatches: 2, Indels: 2
0.83 0.09 0.09
Matches are distributed among these distances:
23 14 0.74
24 5 0.26
ACGTcount: A:0.44, C:0.00, G:0.07, T:0.49
Consensus pattern (23 bp):
TTGTTAATATATTATAAATATAA
Found at i:423065 original size:18 final size:18
Alignment explanation
Indices: 423042--423105 Score: 51
Period size: 18 Copynumber: 3.3 Consensus size: 18
423032 AATAACAATC
423042 ATTAATAAAAATACTGCA
1 ATTAATAAAAATACTGCA
*
423060 ATTAATCGGACAAATAACAAT-C-
1 ATTAAT---AAAAAT-AC--TGCA
423082 ATTAATAAAAATACTGCA
1 ATTAATAAAAATACTGCA
423100 ATTAAT
1 ATTAAT
423106 CGGACAAAGA
Statistics
Matches: 36, Mismatches: 2, Indels: 16
0.67 0.04 0.30
Matches are distributed among these distances:
16 1 0.03
17 1 0.03
18 14 0.39
19 5 0.14
21 5 0.14
22 8 0.22
23 1 0.03
24 1 0.03
ACGTcount: A:0.53, C:0.12, G:0.06, T:0.28
Consensus pattern (18 bp):
ATTAATAAAAATACTGCA
Found at i:423076 original size:40 final size:40
Alignment explanation
Indices: 423032--423113 Score: 164
Period size: 40 Copynumber: 2.0 Consensus size: 40
423022 TAACCAGTGT
423032 AATAACAATCATTAATAAAAATACTGCAATTAATCGGACA
1 AATAACAATCATTAATAAAAATACTGCAATTAATCGGACA
423072 AATAACAATCATTAATAAAAATACTGCAATTAATCGGACA
1 AATAACAATCATTAATAAAAATACTGCAATTAATCGGACA
423112 AA
1 AA
423114 GAAAATTATA
Statistics
Matches: 42, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
40 42 1.00
ACGTcount: A:0.54, C:0.15, G:0.07, T:0.24
Consensus pattern (40 bp):
AATAACAATCATTAATAAAAATACTGCAATTAATCGGACA
Found at i:423645 original size:10 final size:10
Alignment explanation
Indices: 423620--423653 Score: 50
Period size: 10 Copynumber: 3.2 Consensus size: 10
423610 GTTATATTCG
423620 ATTTAATTAAAA
1 ATTTAATT--AA
423632 ATTTAATTAA
1 ATTTAATTAA
423642 ATTTAATTAA
1 ATTTAATTAA
423652 AT
1 AT
423654 CGATTTATTA
Statistics
Matches: 22, Mismatches: 0, Indels: 2
0.92 0.00 0.08
Matches are distributed among these distances:
10 14 0.64
12 8 0.36
ACGTcount: A:0.53, C:0.00, G:0.00, T:0.47
Consensus pattern (10 bp):
ATTTAATTAA
Found at i:423788 original size:22 final size:22
Alignment explanation
Indices: 423755--423836 Score: 64
Period size: 22 Copynumber: 3.8 Consensus size: 22
423745 CGAATAAATC
423755 AAAATA-ATTAAATTTAATATTT
1 AAAATATA-TAAATTTAATATTT
*
423777 AAAATATATAAA-AT-ATATTT
1 AAAATATATAAATTTAATATTT
* *
423797 AATAAAATTTAAATTTAA-ATTT
1 AA-AATATATAAATTTAATATTT
* *
423819 AAACTTATTTAAATTTAA
1 AAA-ATATATAAATTTAA
423837 ACTAAAAGCT
Statistics
Matches: 49, Mismatches: 6, Indels: 10
0.75 0.09 0.15
Matches are distributed among these distances:
20 8 0.16
21 10 0.20
22 29 0.59
23 2 0.04
ACGTcount: A:0.55, C:0.01, G:0.00, T:0.44
Consensus pattern (22 bp):
AAAATATATAAATTTAATATTT
Found at i:423812 original size:6 final size:6
Alignment explanation
Indices: 423801--423837 Score: 51
Period size: 6 Copynumber: 6.5 Consensus size: 6
423791 ATATTTAATA
*
423801 AAATTT AAATTT AAATTT AAACTT --ATTT AAATTT AAA
1 AAATTT AAATTT AAATTT AAATTT AAATTT AAATTT AAA
423838 CTAAAAGCTC
Statistics
Matches: 27, Mismatches: 2, Indels: 4
0.82 0.06 0.12
Matches are distributed among these distances:
4 3 0.11
6 24 0.89
ACGTcount: A:0.51, C:0.03, G:0.00, T:0.46
Consensus pattern (6 bp):
AAATTT
Found at i:423828 original size:16 final size:16
Alignment explanation
Indices: 423809--423839 Score: 62
Period size: 16 Copynumber: 1.9 Consensus size: 16
423799 TAAAATTTAA
423809 ATTTAAATTTAAACTT
1 ATTTAAATTTAAACTT
423825 ATTTAAATTTAAACT
1 ATTTAAATTTAAACT
423840 AAAAGCTCAT
Statistics
Matches: 15, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
16 15 1.00
ACGTcount: A:0.45, C:0.06, G:0.00, T:0.48
Consensus pattern (16 bp):
ATTTAAATTTAAACTT
Found at i:423914 original size:20 final size:21
Alignment explanation
Indices: 423898--423939 Score: 61
Period size: 20 Copynumber: 2.0 Consensus size: 21
423888 AACAAAACTT
423898 AATTAAAACAAAA-AAAATATA
1 AATT-AAACAAAATAAAATATA
423919 AATTAAACAAAATAAAA-ATA
1 AATTAAACAAAATAAAATATA
423939 A
1 A
423940 CTCGAAAAAA
Statistics
Matches: 20, Mismatches: 0, Indels: 3
0.87 0.00 0.13
Matches are distributed among these distances:
20 12 0.60
21 8 0.40
ACGTcount: A:0.76, C:0.05, G:0.00, T:0.19
Consensus pattern (21 bp):
AATTAAACAAAATAAAATATA
Found at i:426789 original size:23 final size:21
Alignment explanation
Indices: 426735--426781 Score: 94
Period size: 21 Copynumber: 2.2 Consensus size: 21
426725 TGGACATGTT
426735 AAAAATGCATGAAACATAATA
1 AAAAATGCATGAAACATAATA
426756 AAAAATGCATGAAACATAATA
1 AAAAATGCATGAAACATAATA
426777 AAAAA
1 AAAAA
426782 AATGCATGGT
Statistics
Matches: 26, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
21 26 1.00
ACGTcount: A:0.66, C:0.09, G:0.09, T:0.17
Consensus pattern (21 bp):
AAAAATGCATGAAACATAATA
Found at i:427747 original size:20 final size:20
Alignment explanation
Indices: 427700--427774 Score: 71
Period size: 20 Copynumber: 3.8 Consensus size: 20
427690 AAAAAGACAT
*
427700 AATGTATCGATACATT-GTA
1 AATGTATCGATACATTCATA
*
427719 GAATATATCGATACATTCATA
1 -AATGTATCGATACATTCATA
* * * *
427740 CATGTATCGATATATTGAAA
1 AATGTATCGATACATTCATA
*
427760 AATGCATCGATACAT
1 AATGTATCGATACAT
427775 CAGGGTATGA
Statistics
Matches: 44, Mismatches: 10, Indels: 2
0.79 0.18 0.04
Matches are distributed among these distances:
20 42 0.95
21 2 0.05
ACGTcount: A:0.40, C:0.13, G:0.13, T:0.33
Consensus pattern (20 bp):
AATGTATCGATACATTCATA
Found at i:427769 original size:40 final size:39
Alignment explanation
Indices: 427697--427774 Score: 102
Period size: 40 Copynumber: 2.0 Consensus size: 39
427687 GGTAAAAAGA
* * *
427697 CATAATGTATCGATACATTGTAGAATATATCGATACATT
1 CATAATGTATCGATACATTGAAAAATACATCGATACATT
* *
427736 CATACATGTATCGATATATTGAAAAATGCATCGATACAT
1 CATA-ATGTATCGATACATTGAAAAATACATCGATACAT
427775 CAGGGTATGA
Statistics
Matches: 33, Mismatches: 5, Indels: 1
0.85 0.13 0.03
Matches are distributed among these distances:
39 4 0.12
40 29 0.88
ACGTcount: A:0.40, C:0.14, G:0.13, T:0.33
Consensus pattern (39 bp):
CATAATGTATCGATACATTGAAAAATACATCGATACATT
Found at i:429400 original size:2 final size:2
Alignment explanation
Indices: 429395--429436 Score: 84
Period size: 2 Copynumber: 21.0 Consensus size: 2
429385 CAAGTGTGTG
429395 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA
1 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA
429437 AACCTGCCAT
Statistics
Matches: 40, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 40 1.00
ACGTcount: A:0.50, C:0.00, G:0.00, T:0.50
Consensus pattern (2 bp):
TA
Found at i:430638 original size:16 final size:17
Alignment explanation
Indices: 430619--430654 Score: 56
Period size: 16 Copynumber: 2.2 Consensus size: 17
430609 AAATTTAATT
430619 TAATAAATTAAA-AAAA
1 TAATAAATTAAATAAAA
*
430635 TAATAATTTAAATAAAA
1 TAATAAATTAAATAAAA
430652 TAA
1 TAA
430655 ACCGTTAAAT
Statistics
Matches: 18, Mismatches: 1, Indels: 1
0.90 0.05 0.05
Matches are distributed among these distances:
16 11 0.61
17 7 0.39
ACGTcount: A:0.69, C:0.00, G:0.00, T:0.31
Consensus pattern (17 bp):
TAATAAATTAAATAAAA
Found at i:431191 original size:30 final size:31
Alignment explanation
Indices: 431155--431212 Score: 82
Period size: 30 Copynumber: 1.9 Consensus size: 31
431145 AAAAATTAAA
431155 AAATTTATAAAAAATTAA-TATTTAAAATTT
1 AAATTTATAAAAAATTAATTATTTAAAATTT
* * *
431185 AAATTTATTAAATATTAATTTTTTAAAA
1 AAATTTATAAAAAATTAATTATTTAAAA
431213 AATACACATA
Statistics
Matches: 24, Mismatches: 3, Indels: 1
0.86 0.11 0.04
Matches are distributed among these distances:
30 16 0.67
31 8 0.33
ACGTcount: A:0.53, C:0.00, G:0.00, T:0.47
Consensus pattern (31 bp):
AAATTTATAAAAAATTAATTATTTAAAATTT
Found at i:431920 original size:15 final size:15
Alignment explanation
Indices: 431868--431976 Score: 55
Period size: 15 Copynumber: 7.1 Consensus size: 15
431858 GGTTTGTATT
431868 ATTTTT-AATTTAAA
1 ATTTTTAAATTTAAA
*
431882 TATTTATAAATTTGAATA
1 -ATTTTTAAATTT-AA-A
*
431900 A--ATTAAATTTAAA
1 ATTTTTAAATTTAAA
*
431913 ATTTTTAAGTTTAGATA
1 ATTTTTAAATTTA-A-A
* *
431930 A-TTTTGAGTTTAAA
1 ATTTTTAAATTTAAA
* * *
431944 TTTTTTAAGTTTAAG
1 ATTTTTAAATTTAAA
*
431959 TTATTTTAAATTTAAA
1 AT-TTTTAAATTTAAA
431975 AT
1 AT
431977 AATTTGATTT
Statistics
Matches: 73, Mismatches: 12, Indels: 17
0.72 0.12 0.17
Matches are distributed among these distances:
13 2 0.03
14 3 0.04
15 34 0.47
16 28 0.38
17 5 0.07
18 1 0.01
ACGTcount: A:0.41, C:0.00, G:0.06, T:0.52
Consensus pattern (15 bp):
ATTTTTAAATTTAAA
Found at i:431965 original size:31 final size:31
Alignment explanation
Indices: 431868--431976 Score: 98
Period size: 31 Copynumber: 3.5 Consensus size: 31
431858 GGTTTGTATT
* * *
431868 ATTTTTAATTTAAATATTTATAAATTT-GAATA
1 ATTTTAAATTTAAA-ATTTTTAAGTTTAG-ATA
*
431900 A-ATTAAATTTAAAATTTTTAAGTTTAGATA
1 ATTTTAAATTTAAAATTTTTAAGTTTAGATA
* * * *
431930 ATTTTGAGTTTAAATTTTTTAAGTTTA-AGTT
1 ATTTTAAATTTAAAATTTTTAAGTTTAGA-TA
431961 ATTTTAAATTTAAAAT
1 ATTTTAAATTTAAAAT
431977 AATTTGATTT
Statistics
Matches: 62, Mismatches: 12, Indels: 7
0.77 0.15 0.09
Matches are distributed among these distances:
30 15 0.24
31 46 0.74
32 1 0.02
ACGTcount: A:0.41, C:0.00, G:0.06, T:0.52
Consensus pattern (31 bp):
ATTTTAAATTTAAAATTTTTAAGTTTAGATA
Found at i:431967 original size:16 final size:16
Alignment explanation
Indices: 431915--431973 Score: 59
Period size: 16 Copynumber: 3.8 Consensus size: 16
431905 AATTTAAAAT
*
431915 TTTTAAGTTT-AGATAA
1 TTTTAAGTTTAAG-TTA
* *
431931 TTTTGAGTTTAAATT-
1 TTTTAAGTTTAAGTTA
431946 TTTTAAGTTTAAGTTA
1 TTTTAAGTTTAAGTTA
*
431962 TTTTAAATTTAA
1 TTTTAAGTTTAA
431974 AATAATTTGA
Statistics
Matches: 35, Mismatches: 6, Indels: 4
0.78 0.13 0.09
Matches are distributed among these distances:
15 13 0.37
16 21 0.60
17 1 0.03
ACGTcount: A:0.34, C:0.00, G:0.10, T:0.56
Consensus pattern (16 bp):
TTTTAAGTTTAAGTTA
Found at i:432427 original size:13 final size:13
Alignment explanation
Indices: 432411--432435 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
432401 GAAAGAAAGG
432411 AGGGAAAAGAGAA
1 AGGGAAAAGAGAA
432424 AGGGAAAAGAGA
1 AGGGAAAAGAGA
432436 GAAAAGAGAA
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.60, C:0.00, G:0.40, T:0.00
Consensus pattern (13 bp):
AGGGAAAAGAGAA
Found at i:432439 original size:22 final size:22
Alignment explanation
Indices: 432405--432447 Score: 68
Period size: 22 Copynumber: 2.0 Consensus size: 22
432395 TAAGGGGAAA
* *
432405 GAAAGGAGGGAAAAGAGAAAGG
1 GAAAAGAGAGAAAAGAGAAAGG
432427 GAAAAGAGAGAAAAGAGAAAG
1 GAAAAGAGAGAAAAGAGAAAG
432448 AAATAAAGAG
Statistics
Matches: 19, Mismatches: 2, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
22 19 1.00
ACGTcount: A:0.60, C:0.00, G:0.40, T:0.00
Consensus pattern (22 bp):
GAAAAGAGAGAAAAGAGAAAGG
Found at i:432627 original size:22 final size:23
Alignment explanation
Indices: 432599--432661 Score: 74
Period size: 22 Copynumber: 2.7 Consensus size: 23
432589 TTTATGTTAT
432599 TTTTTATATTATATTTTAA-TTA
1 TTTTTATATTATATTTTAATTTA
* *
432621 TTTTTATGTTATATTTAAATTTA
1 TTTTTATATTATATTTTAATTTA
* *
432644 TATATATATATATATTTT
1 TTTTTATAT-TATATTTT
432662 TTTTATATTT
Statistics
Matches: 33, Mismatches: 6, Indels: 2
0.80 0.15 0.05
Matches are distributed among these distances:
22 17 0.52
23 9 0.27
24 7 0.21
ACGTcount: A:0.33, C:0.00, G:0.02, T:0.65
Consensus pattern (23 bp):
TTTTTATATTATATTTTAATTTA
Found at i:432672 original size:6 final size:6
Alignment explanation
Indices: 432601--432672 Score: 55
Period size: 6 Copynumber: 12.7 Consensus size: 6
432591 TATGTTATTT
* *
432601 TTTATA -TTATA TTT-TA ATTAT- TTT-TA TGTTATA TTTAAA TTTATA
1 TTTATA TTTATA TTTATA TTTATA TTTATA T-TTATA TTTATA TTTATA
* * *
432646 TATATA TATATA TTT-TT TTTATA TTTA
1 TTTATA TTTATA TTTATA TTTATA TTTA
432673 CAATATTATA
Statistics
Matches: 52, Mismatches: 8, Indels: 12
0.72 0.11 0.17
Matches are distributed among these distances:
4 1 0.02
5 16 0.31
6 32 0.62
7 3 0.06
ACGTcount: A:0.33, C:0.00, G:0.01, T:0.65
Consensus pattern (6 bp):
TTTATA
Found at i:432691 original size:35 final size:37
Alignment explanation
Indices: 432619--432691 Score: 96
Period size: 37 Copynumber: 2.0 Consensus size: 37
432609 ATATTTTAAT
432619 TATTTTTATGTTATATTTAAATTTATATATATATATA
1 TATTTTTATGTTATATTTAAATTTATATATATATATA
* *
432656 TATTTTT-T-TTATATTTACAATATTATAAATTTATAT
1 TATTTTTATGTTATATTTA-AAT-TTATATATATATAT
432692 GAAATTTTAT
Statistics
Matches: 32, Mismatches: 2, Indels: 4
0.84 0.05 0.11
Matches are distributed among these distances:
35 9 0.28
36 4 0.12
37 19 0.59
ACGTcount: A:0.37, C:0.01, G:0.01, T:0.60
Consensus pattern (37 bp):
TATTTTTATGTTATATTTAAATTTATATATATATATA
Found at i:432932 original size:22 final size:23
Alignment explanation
Indices: 432884--432925 Score: 61
Period size: 22 Copynumber: 1.9 Consensus size: 23
432874 TCATATCATA
*
432884 TTTATATTATTTTTGTATTTTAT
1 TTTATATTATTTTTGTATGTTAT
432907 TTTA-ATTATTTTT-TATGTT
1 TTTATATTATTTTTGTATGTT
432926 GTGTTTATGT
Statistics
Matches: 18, Mismatches: 1, Indels: 2
0.86 0.05 0.10
Matches are distributed among these distances:
21 5 0.28
22 9 0.50
23 4 0.22
ACGTcount: A:0.21, C:0.00, G:0.05, T:0.74
Consensus pattern (23 bp):
TTTATATTATTTTTGTATGTTAT
Found at i:434000 original size:14 final size:14
Alignment explanation
Indices: 433978--434017 Score: 53
Period size: 14 Copynumber: 2.8 Consensus size: 14
433968 AAAGAAATAA
433978 AAAAATTAAATTTT
1 AAAAATTAAATTTT
* *
433992 AAAATTTAAATTTC
1 AAAAATTAAATTTT
434006 AAATAATTAAAT
1 AAA-AATTAAAT
434018 ATTATTTTTT
Statistics
Matches: 22, Mismatches: 3, Indels: 1
0.85 0.12 0.04
Matches are distributed among these distances:
14 15 0.68
15 7 0.32
ACGTcount: A:0.57, C:0.03, G:0.00, T:0.40
Consensus pattern (14 bp):
AAAAATTAAATTTT
Found at i:434243 original size:16 final size:17
Alignment explanation
Indices: 434211--434248 Score: 60
Period size: 17 Copynumber: 2.3 Consensus size: 17
434201 TACGATTAGA
434211 AGAATGAAAAAACAATT
1 AGAATGAAAAAACAATT
*
434228 AGAATTAAAAAA-AATT
1 AGAATGAAAAAACAATT
434244 AGAAT
1 AGAAT
434249 AATTTTAAAA
Statistics
Matches: 20, Mismatches: 1, Indels: 1
0.91 0.05 0.05
Matches are distributed among these distances:
16 9 0.45
17 11 0.55
ACGTcount: A:0.66, C:0.03, G:0.11, T:0.21
Consensus pattern (17 bp):
AGAATGAAAAAACAATT
Done.