Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1612
Parameters: 2 7 7 80 10 50 1000
Length:  21633

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5389--5438
22
2.2
24
82
7
59
52
6
2
40
1.38
7236--7544
32
9.8
32
89
5
461
15
18
33
32
1.92
7531--8406
53
16.5
54
92
5
1382
27
14
34
23
1.94
7531--8406
27
32.9
27
90
6
1382
27
14
34
23
1.94
8381--8437
30
1.9
30
89
7
89
33
15
26
24
1.95
16231--16260
10
3.0
10
95
0
51
0
13
0
86
0.57
16232--16266
16
2.1
17
89
5
54
0
17
0
82
0.66
17374--17488
45
2.5
45
80
4
122
31
21
27
19
1.97
17510--17969
32
14.6
32
93
4
738
15
19
33
31
1.93
17961--18791
27
31.0
27
88
6
1210
29
14
33
22
1.93
20109--20158
20
2.4
20
83
12
57
2
14
8
76
1.10
20134--20175
14
2.8
16
79
17
54
4
16
9
69
1.33
20128--20192
34
1.9
33
87
9
96
4
12
7
75
1.17
20148--20189
21
2.0
22
85
4
59
4
14
7
73
1.21
20132--20186
29
1.9
28
85
10
76
5
14
9
70
1.30

Tables:   1

The End!