Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1621
Parameters: 2 7 7 80 10 50 1000
Length:  25035

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16--65
15
3.2
16
71
18
52
52
0
0
48
1.00
27--129
52
1.9
55
80
9
124
43
0
0
56
0.99
64--109
14
3.1
14
82
17
58
32
0
0
67
0.91
7--129
28
4.3
28
76
16
94
43
0
0
56
0.99
247--300
17
3.2
16
76
5
54
51
0
0
48
1.00
317--384
5
14.4
5
74
20
58
57
0
0
42
0.98
320--391
9
7.8
9
77
11
56
58
0
0
41
0.98
317--391
14
5.4
14
71
17
57
58
0
0
41
0.98
318--384
23
2.8
24
80
17
86
56
0
0
43
0.99
403--436
16
2.1
17
88
5
52
44
5
0
50
1.26
7932--7974
14
3.1
13
84
15
59
30
0
4
65
1.13
8015--8063
18
2.9
18
80
17
61
46
0
2
51
1.12
8017--8064
14
3.0
16
79
17
55
45
0
2
52
1.12
9797--9829
14
2.3
15
89
5
50
48
3
0
48
1.17
10719--10778
29
2.1
29
96
0
111
35
18
13
33
1.89
11586--11647
29
2.2
28
82
2
70
61
1
3
33
1.22
11591--11637
12
4.0
12
73
15
53
70
2
0
27
0.99
12384--12412
14
2.0
15
93
6
51
41
0
0
58
0.98
14339--14400
30
2.1
30
90
0
97
45
1
1
51
1.20
14480--14518
19
2.1
19
95
0
69
41
15
2
41
1.61
15354--15386
16
2.0
17
88
5
50
39
0
3
57
1.14
19868--19899
13
2.5
13
94
0
55
34
12
18
34
1.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21844--21901
16
3.6
15
73
15
53
32
5
8
53
1.54
22426--22459
16
2.1
16
88
0
50
55
14
2
26
1.53
22477--22515
19
2.2
17
86
9
51
66
0
2
30
1.05
23240--23270
16
1.9
16
93
0
53
48
29
9
12
1.73
23835--23887
25
2.1
25
82
6
63
75
1
0
22
0.90
24789--24822
15
2.1
17
89
10
54
41
0
5
52
1.25

Tables:   1

The End!