Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1626
Parameters: 2 7 7 80 10 50 1000
Length:  39591

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4107--4131
1
25.0
1
100
0
50
0
0
100
0
0.00
5384--5416
2
17.0
2
93
6
59
48
0
51
0
1.00
5630--5658
11
2.5
12
88
11
51
13
17
10
58
1.62
6310--6349
21
1.9
21
90
10
64
40
0
0
60
0.97
6311--6361
21
2.3
21
83
12
59
43
0
0
56
0.99
8448--8535
43
2.0
43
100
0
176
50
18
5
26
1.69
16308--16359
21
2.4
21
78
18
54
55
1
23
19
1.53
17876--17914
13
3.0
13
84
0
51
30
20
12
35
1.90
21354--21406
20
2.6
20
84
3
61
43
11
13
32
1.79
21441--21560
52
2.3
52
79
1
143
30
12
12
45
1.79
29923--29999
21
3.7
21
89
3
111
35
12
16
35
1.88
30035--30102
19
3.9
19
78
21
85
35
11
14
38
1.83
30037--30099
32
2.0
32
96
0
117
34
12
15
36
1.86
30056--30080
13
1.9
13
100
0
50
36
16
16
32
1.90
30122--30188
33
2.0
33
85
0
89
26
13
14
44
1.83
32521--32651
51
2.5
53
84
8
178
31
25
10
32
1.90
32635--32710
27
2.8
28
90
6
111
23
32
21
22
1.98
32693--32914
51
4.4
51
78
2
212
27
27
13
31
1.94

Tables:   1

The End!