Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1631
Parameters: 2 7 7 80 10 50 1000
Length:  101004

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6363--6388
10
2.6
10
100
0
52
80
0
11
7
0.89
8010--8053
22
2.0
22
86
8
63
36
2
22
38
1.67
13184--13234
25
2.1
24
88
3
75
25
5
1
66
1.24
13362--13407
21
2.0
24
88
12
71
21
13
4
60
1.49
13744--13783
21
1.9
21
100
0
80
62
0
7
30
1.23
24474--24534
32
1.9
32
96
0
113
39
21
9
29
1.85
28638--28677
21
1.9
21
100
0
80
30
7
0
62
1.23
29014--29059
21
2.0
24
88
12
71
60
4
13
21
1.49
29187--29237
25
2.1
24
88
3
75
66
1
5
25
1.24
36033--36058
10
2.6
10
100
0
52
7
11
0
80
0.89
42893--42938
22
2.0
22
87
8
65
47
2
4
45
1.34
48185--48212
14
2.0
14
100
0
56
14
14
0
71
1.15
48209--48259
6
9.2
6
79
16
56
33
3
13
49
1.61
48203--48255
27
2.0
27
100
0
106
32
7
11
49
1.67
56968--56995
14
2.0
14
100
0
56
14
14
0
71
1.15
56992--57042
6
9.2
6
79
16
56
33
3
13
49
1.61
56986--57038
27
2.0
27
100
0
106
32
7
11
49
1.67
65203--65263
32
1.9
32
96
0
113
39
21
9
29
1.85
75791--75816
10
2.6
10
100
0
52
80
0
11
7
0.89
77438--77481
22
2.0
22
86
8
63
36
2
22
38
1.67
82612--82662
25
2.1
24
88
3
75
25
5
1
66
1.24
82790--82835
21
2.0
24
88
12
71
21
13
4
60
1.49
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
83172--83211
21
1.9
21
100
0
80
62
0
7
30
1.23
87315--87375
32
1.9
32
96
0
113
29
9
21
39
1.85
95537--95589
27
2.0
27
100
0
106
49
11
7
32
1.67
95533--95583
6
9.2
6
77
16
56
49
13
3
33
1.61
95580--95607
14
2.0
14
100
0
56
71
0
14
14
1.15
100854--100899
22
2.0
24
87
8
69
45
4
2
47
1.34

Tables:   1

The End!