Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1637
Parameters: 2 7 7 80 10 50 1000
Length:  53263

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3526--3554
2
14.5
2
100
0
58
0
48
0
51
1.00
3748--3804
28
2.0
28
83
10
71
49
1
0
49
1.11
9285--9324
6
6.7
6
88
0
53
20
65
2
12
1.38
11985--12063
11
7.0
12
78
9
78
64
1
2
31
1.15
11991--12063
17
4.4
17
74
5
69
64
1
2
31
1.16
11987--12058
10
7.1
10
73
17
60
65
1
2
30
1.15
12300--12337
2
19.0
2
100
0
76
50
0
0
50
1.00
14206--14241
2
18.0
2
94
0
63
50
2
0
47
1.15
14763--14800
2
19.0
2
100
0
76
50
0
0
50
1.00
19518--19566
22
2.3
21
82
3
62
51
12
0
36
1.40
24739--24788
17
2.7
19
78
12
68
58
2
0
40
1.10
25607--25638
14
2.2
15
94
5
57
40
0
0
59
0.97
25692--25735
2
22.0
2
85
0
61
45
6
0
47
1.29
25735--25799
2
32.5
2
100
0
130
50
0
49
0
1.00
26398--26430
2
16.5
2
100
0
66
51
0
0
48
1.00
26923--26947
2
12.5
2
100
0
50
52
0
0
48
1.00
28727--28766
2
20.0
2
89
0
62
50
0
0
50
1.00
34421--34454
2
17.0
2
100
0
68
50
0
0
50
1.00
36511--36561
12
3.9
12
78
16
57
43
5
11
39
1.66
36517--36573
27
2.1
27
90
0
87
40
5
19
35
1.74
41200--41225
12
2.2
12
100
0
52
15
34
26
23
1.94
41228--41278
12
3.9
12
78
16
57
43
5
11
39
1.66
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41234--41290
27
2.1
27
90
0
87
40
5
19
35
1.74
43580--43628
22
2.2
22
100
0
98
67
8
8
16
1.40
44571--44621
20
2.5
20
83
0
66
39
13
11
35
1.82
45149--45999
32
26.6
32
97
0
1533
13
18
36
31
1.90
45982--46664
27
25.0
27
91
2
1080
27
14
34
23
1.93
45982--46664
82
8.3
81
92
2
1080
27
14
34
23
1.93
47616--48014
198
2.0
198
98
0
764
24
13
20
40
1.89

Tables:   1

The End!