Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: Scaffold1651
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 43206
ACGTcount: A:0.29, C:0.22, G:0.15, T:0.34
Found at i:144 original size:1 final size:1
Alignment explanation
Indices: 140--217 Score: 57
Period size: 1 Copynumber: 78.0 Consensus size: 1
130 AAAAGTGATG
* * * * * * * * *
140 AAAAAAAAAAAAAAAACAAACAAACAAAAAAACACACAAAAAAAAAAACAAAAAAACACAAAAAA
1 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
* *
205 AACACAAAAAAAA
1 AAAAAAAAAAAAA
218 TGCAAAGGCA
Statistics
Matches: 55, Mismatches: 22, Indels: 0
0.71 0.29 0.00
Matches are distributed among these distances:
1 55 1.00
ACGTcount: A:0.86, C:0.14, G:0.00, T:0.00
Consensus pattern (1 bp):
A
Found at i:168 original size:24 final size:23
Alignment explanation
Indices: 141--217 Score: 88
Period size: 24 Copynumber: 3.3 Consensus size: 23
131 AAAGTGATGA
*
141 AAAAAAAAAAAAAAACAAACAAAC
1 AAAAAAAAACAAAAA-AAACAAAC
165 AAAAAAACACACAAAAAAAA-AAAC
1 AAAAAAA-A-ACAAAAAAAACAAAC
*
189 AAAAAAACACAAAAAAAAC--AC
1 AAAAAAAAACAAAAAAAACAAAC
210 AAAAAAAA
1 AAAAAAAA
218 TGCAAAGGCA
Statistics
Matches: 47, Mismatches: 3, Indels: 9
0.80 0.05 0.15
Matches are distributed among these distances:
21 9 0.19
22 10 0.21
24 18 0.38
25 4 0.09
26 6 0.13
ACGTcount: A:0.86, C:0.14, G:0.00, T:0.00
Consensus pattern (23 bp):
AAAAAAAAACAAAAAAAACAAAC
Found at i:186 original size:32 final size:33
Alignment explanation
Indices: 145--217 Score: 121
Period size: 32 Copynumber: 2.2 Consensus size: 33
135 TGATGAAAAA
* *
145 AAAAAAAAAAACAAACAAACA-AAAAAACACAC
1 AAAAAAAAAAACAAAAAAACACAAAAAAAACAC
177 AAAAAAAAAAACAAAAAAACACAAAAAAAACAC
1 AAAAAAAAAAACAAAAAAACACAAAAAAAACAC
210 AAAAAAAA
1 AAAAAAAA
218 TGCAAAGGCA
Statistics
Matches: 38, Mismatches: 2, Indels: 1
0.93 0.05 0.02
Matches are distributed among these distances:
32 20 0.53
33 18 0.47
ACGTcount: A:0.85, C:0.15, G:0.00, T:0.00
Consensus pattern (33 bp):
AAAAAAAAAAACAAAAAAACACAAAAAAAACAC
Found at i:223 original size:11 final size:11
Alignment explanation
Indices: 146--217 Score: 78
Period size: 11 Copynumber: 6.7 Consensus size: 11
136 GATGAAAAAA
*
146 AAAAAAAAAAC
1 AAAAAAAACAC
*
157 -AAACAAACA-
1 AAAAAAAACAC
*
166 AAAAAACACAC
1 AAAAAAAACAC
*
177 AAAAAAAA-AA
1 AAAAAAAACAC
187 ACAAAAAAACAC
1 A-AAAAAAACAC
199 AAAAAAAACAC
1 AAAAAAAACAC
210 AAAAAAAA
1 AAAAAAAA
218 TGCAAAGGCA
Statistics
Matches: 50, Mismatches: 7, Indels: 8
0.77 0.11 0.12
Matches are distributed among these distances:
10 16 0.32
11 32 0.64
12 2 0.04
ACGTcount: A:0.85, C:0.15, G:0.00, T:0.00
Consensus pattern (11 bp):
AAAAAAAACAC
Found at i:477 original size:17 final size:17
Alignment explanation
Indices: 456--487 Score: 57
Period size: 17 Copynumber: 1.9 Consensus size: 17
446 TCTTTTCCAA
456 AAAAAAG-AAACAAAAC
1 AAAAAAGAAAACAAAAC
472 AAAAAAGAAAACAAAA
1 AAAAAAGAAAACAAAA
488 GAGGAAAAAC
Statistics
Matches: 15, Mismatches: 0, Indels: 1
0.94 0.00 0.06
Matches are distributed among these distances:
16 7 0.47
17 8 0.53
ACGTcount: A:0.84, C:0.09, G:0.06, T:0.00
Consensus pattern (17 bp):
AAAAAAGAAAACAAAAC
Found at i:1493 original size:31 final size:31
Alignment explanation
Indices: 1455--1595 Score: 191
Period size: 31 Copynumber: 4.5 Consensus size: 31
1445 ATAAAAAAAA
1455 TCCACGACTCAGTGGCAATCTCTTCTCAAAG
1 TCCACGACTCAGTGGCAATCTCTTCTCAAAG
*
1486 TCCACGACTCAGTGGCAATCTCTGCTCAAAG
1 TCCACGACTCAGTGGCAATCTCTTCTCAAAG
*
1517 TCCACGACGCAGTGGC-ATC-CTTCTCTTTAAAG
1 TCCACGACTCAGTGGCAATCTCTTCTC---AAAG
*
1549 TCCACGACTCAGTGGC-AT-TTTGTCTCAAAG
1 TCCACGACTCAGTGGCAATCTCT-TCTCAAAG
1579 TCCACGACTCAGTGGCA
1 TCCACGACTCAGTGGCA
1596 TTTTTTCTTT
Statistics
Matches: 99, Mismatches: 5, Indels: 12
0.85 0.04 0.10
Matches are distributed among these distances:
29 5 0.05
30 23 0.23
31 45 0.45
32 22 0.22
33 4 0.04
ACGTcount: A:0.24, C:0.31, G:0.19, T:0.26
Consensus pattern (31 bp):
TCCACGACTCAGTGGCAATCTCTTCTCAAAG
Found at i:1596 original size:62 final size:63
Alignment explanation
Indices: 1455--1614 Score: 206
Period size: 62 Copynumber: 2.6 Consensus size: 63
1445 ATAAAAAAAA
1455 TCCACGACTCAGTGGCAATCTCTTCTC---AAAGTCCACGACTCAGTGGCAATCTCTGCTCAAAG
1 TCCACGACTCAGTGGC-ATC-CTTCTCTTTAAAGTCCACGACTCAGTGGCAATCTCTGCTCAAAG
* *
1517 TCCACGACGCAGTGGCATCCTTCTCTTTAAAGTCCACGACTCAGTGGC-AT-TTTGTCTCAAAG
1 TCCACGACTCAGTGGCATCCTTCTCTTTAAAGTCCACGACTCAGTGGCAATCTCTG-CTCAAAG
* * *
1579 TCCACGACTCAGTGGCAT-TTTTTCTTTAAAGCCCAC
1 TCCACGACTCAGTGGCATCCTTCTCTTTAAAGTCCAC
1615 AACTTTGTGG
Statistics
Matches: 88, Mismatches: 6, Indels: 9
0.85 0.06 0.09
Matches are distributed among these distances:
60 6 0.07
61 21 0.24
62 41 0.47
63 20 0.23
ACGTcount: A:0.24, C:0.31, G:0.17, T:0.28
Consensus pattern (63 bp):
TCCACGACTCAGTGGCATCCTTCTCTTTAAAGTCCACGACTCAGTGGCAATCTCTGCTCAAAG
Found at i:1625 original size:93 final size:94
Alignment explanation
Indices: 1455--1637 Score: 221
Period size: 93 Copynumber: 2.0 Consensus size: 94
1445 ATAAAAAAAA
*
1455 TCCACGACTCAGTGGCAATCTCTTCTCAAAGTCCACGACTCAGTGGCAATCTCTGCTCAAAGTCC
1 TCCACGACTCAGTGGCAATCTCTTCTCAAAGTCCACGACTCAGTGGCAATCTCTGCTCAAAGCCC
*
1520 ACGACGCAGTGGCATCCTTC-TCTTTAAAG
66 ACAACGCAGTGGCA-CCTTCTTCTTTAAAG
* * * * *
1549 TCCACGACTCAGTGGC-AT-TTTGTCTCAAAGTCCACGACTCAGTGGC-ATTTTTTCTTTAAAGC
1 TCCACGACTCAGTGGCAATCTCT-TCTCAAAGTCCACGACTCAGTGGCAATCTCTGC-TCAAAGC
***
1611 CCACAACTTTGTGGCACCTTCTTCTTT
64 CCACAACGCAGTGGCACCTTCTTCTTT
1638 TCAAAGCTCA
Statistics
Matches: 76, Mismatches: 10, Indels: 7
0.82 0.11 0.08
Matches are distributed among these distances:
92 12 0.16
93 48 0.63
94 16 0.21
ACGTcount: A:0.22, C:0.30, G:0.17, T:0.31
Consensus pattern (94 bp):
TCCACGACTCAGTGGCAATCTCTTCTCAAAGTCCACGACTCAGTGGCAATCTCTGCTCAAAGCCC
ACAACGCAGTGGCACCTTCTTCTTTAAAG
Found at i:1669 original size:37 final size:33
Alignment explanation
Indices: 1575--1909 Score: 243
Period size: 34 Copynumber: 10.3 Consensus size: 33
1565 ATTTTGTCTC
* * * *
1575 AAAGTCCACGACTCAGTGGCA-TTTTTTC-TTT
1 AAAGCCCACAACTCCGTGGCACCTTTTTCTTTT
** *
1606 AAAGCCCACAACTTTGTGGCACCTTCTTCTTTT
1 AAAGCCCACAACTCCGTGGCACCTTTTTCTTTT
* *
1639 CAAAGCTCACAACTCCGTGGCACCTTCTTCTTTT
1 -AAAGCCCACAACTCCGTGGCACCTTTTTCTTTT
**
1673 AAAGCCCACAACTTTGTGGCACTCTTTTTTCCTTTT
1 AAAGCCCACAACTCCGTGGCAC-C-TTTTT-CTTTT
1709 CAAAGCCCACAACTCCGTGGCACCTTTTTC-TTT
1 -AAAGCCCACAACTCCGTGGCACCTTTTTCTTTT
* ****
1742 AAAGCCCACAACTCTGTGGCACCTACAACTTTGT
1 AAAGCCCACAACTCCGTGGCACCTTTTTCTTT-T
* * ** *
1776 ---G-GCAC-TCT-C-TTTC-CC---TT-TTTA
1 AAAGCCCACAACTCCGTGGCACCTTTTTCTTTT
1797 -AAGCCCACAACTCCGTGGCACCTTTTTCTGTTT
1 AAAGCCCACAACTCCGTGGCACCTTTTTCT-TTT
*
1830 AAAGCCCACAACTCCGTGGCACTCTTTTTCCCTTTC
1 AAAGCCCACAACTCCGTGGCAC-CTTTTT--CTTTT
* *
1866 AAAGCCCACAAACTCCGTGGCACTTTTTTCTTCT
1 AAAGCCCAC-AACTCCGTGGCACCTTTTTCTTTT
1900 AAAGCCCACA
1 AAAGCCCACA
1910 CAAGTCGGTG
Statistics
Matches: 241, Mismatches: 37, Indels: 50
0.73 0.11 0.15
Matches are distributed among these distances:
22 3 0.01
23 1 0.00
24 3 0.01
25 2 0.01
26 3 0.01
27 4 0.02
28 2 0.01
29 2 0.01
30 3 0.01
31 20 0.08
32 30 0.12
33 30 0.12
34 66 0.27
35 15 0.06
36 22 0.09
37 35 0.15
ACGTcount: A:0.22, C:0.33, G:0.13, T:0.33
Consensus pattern (33 bp):
AAAGCCCACAACTCCGTGGCACCTTTTTCTTTT
Found at i:1729 original size:70 final size:69
Alignment explanation
Indices: 1573--1763 Score: 257
Period size: 70 Copynumber: 2.8 Consensus size: 69
1563 GCATTTTGTC
* * * * * *
1573 TCAAAGTCCACGACTCAGTGGCA-TTTTTTC-TTTAAAGCCCACAACTTTGTGGCAC-CTTCTT-
1 TCAAAGCCCACAACTCCGTGGCACCTTTTTCTTTTAAAGCCCACAACTCTGTGGCACTCTTTTTC
1634 CTTT
66 CTTT
* * *
1638 TCAAAGCTCACAACTCCGTGGCACCTTCTTCTTTTAAAGCCCACAACTTTGTGGCACTCTTTTTT
1 TCAAAGCCCACAACTCCGTGGCACCTTTTTCTTTTAAAGCCCACAACTCTGTGGCACTC-TTTTT
1703 CCTTT
65 CCTTT
1708 TCAAAGCCCACAACTCCGTGGCACCTTTTTC-TTTAAAGCCCACAACTCTGTGGCAC
1 TCAAAGCCCACAACTCCGTGGCACCTTTTTCTTTTAAAGCCCACAACTCTGTGGCAC
1764 CTACAACTTT
Statistics
Matches: 111, Mismatches: 10, Indels: 6
0.87 0.08 0.05
Matches are distributed among these distances:
65 19 0.17
66 5 0.05
67 25 0.23
68 1 0.01
69 28 0.25
70 33 0.30
ACGTcount: A:0.22, C:0.31, G:0.13, T:0.34
Consensus pattern (69 bp):
TCAAAGCCCACAACTCCGTGGCACCTTTTTCTTTTAAAGCCCACAACTCTGTGGCACTCTTTTTC
CTTT
Found at i:1825 original size:86 final size:87
Alignment explanation
Indices: 1680--1851 Score: 292
Period size: 86 Copynumber: 2.0 Consensus size: 87
1670 TTTAAAGCCC
* *
1680 ACAACTTTGTGGCACTCTTTTTTCCTTTTCAAAGCCCACAACTCCGTGGCACCTTTTTC-TTTAA
1 ACAACTTTGTGGCACTCTCTTTCCCTTTTCAAAGCCCACAACTCCGTGGCACCTTTTTCGTTTAA
*
1744 AGCCCACAACTCTGTGGCACCT
66 AGCCCACAACTCCGTGGCACCT
*
1766 ACAACTTTGTGGCACTCTCTTTCCCTTTTTAAAGCCCACAACTCCGTGGCACCTTTTTCTGTTTA
1 ACAACTTTGTGGCACTCTCTTTCCCTTTTCAAAGCCCACAACTCCGTGGCACCTTTTTC-GTTTA
1831 AAGCCCACAACTCCGTGGCAC
65 AAGCCCACAACTCCGTGGCAC
1852 TCTTTTTCCC
Statistics
Matches: 80, Mismatches: 4, Indels: 2
0.93 0.05 0.02
Matches are distributed among these distances:
86 56 0.70
88 24 0.30
ACGTcount: A:0.21, C:0.33, G:0.13, T:0.33
Consensus pattern (87 bp):
ACAACTTTGTGGCACTCTCTTTCCCTTTTCAAAGCCCACAACTCCGTGGCACCTTTTTCGTTTAA
AGCCCACAACTCCGTGGCACCT
Found at i:1909 original size:70 final size:71
Alignment explanation
Indices: 1774--1909 Score: 213
Period size: 71 Copynumber: 1.9 Consensus size: 71
1764 CTACAACTTT
* *
1774 GTGGCACTCTCTTTCCCTTTTTAAAGCCCACAACTCCGTGGCACCTTTTTCTGTTTAAAGCCCAC
1 GTGGCACTCTCTTTCCCTTTTCAAAGCCCACAACTCCGTGGCACCTTTTTCTGTCTAAAGCCCAC
1839 AACTCC
66 AACTCC
* *
1845 GTGGCACTCTTTTTCCC-TTTCAAAGCCCACAAACTCCGTGGCACTTTTTTCT-TCTAAAGCCCA
1 GTGGCACTCTCTTTCCCTTTTCAAAGCCCAC-AACTCCGTGGCACCTTTTTCTGTCTAAAGCCCA
1908 CA
65 CA
1910 CAAGTCGGTG
Statistics
Matches: 60, Mismatches: 4, Indels: 3
0.90 0.06 0.04
Matches are distributed among these distances:
70 24 0.40
71 36 0.60
ACGTcount: A:0.21, C:0.35, G:0.12, T:0.32
Consensus pattern (71 bp):
GTGGCACTCTCTTTCCCTTTTCAAAGCCCACAACTCCGTGGCACCTTTTTCTGTCTAAAGCCCAC
AACTCC
Found at i:1988 original size:49 final size:49
Alignment explanation
Indices: 1930--5404 Score: 4468
Period size: 49 Copynumber: 70.7 Consensus size: 49
1920 GCAACCCTTC
* * *
1930 TAAGCCCAATATAGCTGGTCC-TGAATCAGCATATTGGCACCTTCATCTT
1 TAAGTCCAATGTAGCTGG-CCTTGAATCAGCACATTGGCACCTTCATCTT
* * * *
1979 TAAGTCCAATGTGGCTGGCCTTGACTCAGCACATTGGCACCTTCACCAT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * * *
2028 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCATCATCATCTT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * *
2077 TAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCTTCACCAT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * *
2126 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * *
2175 TAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCTTCACCAT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * * * *
2224 TAAGCCCAATATAGCTGGCCTTGAATCAGCATATTGGCACTTTTATCTT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * *
2273 TAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCA-CTTGCACCAT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTT-CATCTT
* * *
2322 TAAGTCC-ATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
*
2370 TAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCTTCATCTT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * * * *
2419 TCAGTCCAATATAGCTGGCCTTGAATCAGCATATCGGCACATTTTCCATCTT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCAC--CTT-CATCTT
* * *
2471 TAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCTTCACCAT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * *
2520 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * * *
2569 TAAGTCCAATGTAGCTGGCCTTGACTCAGCACAATGGCACCTTCACCAT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * * *
2618 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCATCATCATCTT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * *
2667 TAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCTTCACCAT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * *
2716 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * *
2765 TAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCTTCACCAT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * * * *
2814 TAAGCCCAATATAGCTGGCCTTGAATCAGCATATTGGCACTTTTATCTT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * *
2863 TAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCA-CTTGCACCAT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTT-CATCTT
* * *
2912 TAAGTCC-ATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
*
2960 TAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCTTCATCTT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * * * *
3009 TCAGTCCAATATAGCTGGCCTTGAATCAGCATATCGGCACATTTTCCATCTT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCAC--CTT-CATCTT
* * *
3061 TAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCTTCACCAT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * *
3110 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * * *
3159 TAAGTCCAATGTAGCTGGCCTTGACTCAGCACAATGGCACCTTCACCAT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * * *
3208 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCATCATCATCTT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * *
3257 TAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCTTCACCAT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * *
3306 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * *
3355 TAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCTTCACCAT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * * * *
3404 TAAGCCCAATATAGCTGGCCTTGAATCAGCATATTGGCACTTTTATCTT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * *
3453 TAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCA-CTTGCACCAT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTT-CATCTT
* * *
3502 TAAGTCC-ATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
*
3550 TAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCTTCATCTT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * * * *
3599 TCAGTCCAATATAGCTGGCCTTGAATCAGCATATCGGCACATTTTCCATCTT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCAC--CTT-CATCTT
* * *
3651 TAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCTTCACCAT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * *
3700 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * *
3749 TAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCTTCACCAT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * * * *
3798 TAAGCCCAATATAGCTGGCCTTGAATCAGCATATTGGCACTTTTATCTT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * * *
3847 TAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCA-TTTGCACCAT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTT-CATCTT
* * *
3896 TAAGTCC-ATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
3944 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * * * *
3993 TCAGTCCAATATAGCTGGCCTTGAATCAGCATATCGGCACATTTTCCATCTT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCAC--CTT-CATCTT
* * *
4045 TAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCTTCACCAT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * * * * *
4094 TAAGCCCAATATAGCTGGCCTTGAATTAGCATATTGGCATCATCATCTT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * *
4143 TAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCTTCACCAT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * * * *
4192 TAAGCCCAATATAGCTGGCCTTGAATCAGCATATTGGCACTTTTATCTT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * *
4241 TAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCA-CTTGCACCAT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTT-CATCTT
* * *
4290 TAAGTCC-ATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * * *
4338 TAAGTCCAATGTAGCTGGCCTTGACTTAGCACATTGGCACCTTCACCAT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * *
4387 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * *
4436 TAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCTTCACCAT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * * *
4485 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCATCATCATCTT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * *
4534 TAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCTTCACCAT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * * *
4583 TAAGTCCAATATAGCTGGCCTTGACTCAGCATATTGGCACCTTTATCTT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * *
4632 TAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCTTCACCAT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * * *
4681 TAAGCCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
*
4730 TAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCTTCATCTT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * * * *
4779 TCAGTCCAATATAGCTGGCCTTGAATCAGCATATCGGCACATTTTCCATCTT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCAC--CTT-CATCTT
* * *
4831 TAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCTTCACCAT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * * *
4880 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATCGGCACATTTTCCATCTT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCAC--CTT-CATCTT
* * *
4932 TAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCTTCACCAT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * *
4981 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * *
5030 TAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCTTCACCAT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * * * *
5079 TAAGCCCAATATAGCTGGCCTTGAATCAGCATATTGGCACTTTTATCTT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * * *
5128 TAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCA-TTTGCACCAT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTT-CATCTT
* * *
5177 TAAGTCC-ATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
5225 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGG------CATCTT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
*
5268 TAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCTTCATCTT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
* * *
5317 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATCGGCACCTTTTCCATCTT
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACC--TT-CATCTT
*
5369 TAAGTTCAATGTAGCTGGCCTTGAATCAGCACATTG
1 TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTG
5405 ACATCATTTT
Statistics
Matches: 2926, Mismatches: 454, Indels: 89
0.84 0.13 0.03
Matches are distributed among these distances:
43 41 0.01
48 244 0.08
49 2332 0.80
50 12 0.00
51 14 0.00
52 283 0.10
ACGTcount: A:0.25, C:0.26, G:0.18, T:0.31
Consensus pattern (49 bp):
TAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCACCTTCATCTT
Found at i:2104 original size:98 final size:98
Alignment explanation
Indices: 1930--5404 Score: 5827
Period size: 98 Copynumber: 35.4 Consensus size: 98
1920 GCAACCCTTC
* * *
1930 TAAGCCCAATATAGCTGGTCC-TGAATCAGCATATTGGCACCTTCATCTTTAAGTCCAATGTGGC
1 TAAGTCCAATATAGCTGG-CCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGC
1994 TGGCCTTGACTCAGCACATTGGCACCTTCACCAT
65 TGGCCTTGACTCAGCACATTGGCACCTTCACCAT
* * *
2028 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCATCATCATCTTTAAGTCCAATGTAGCT
1 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
2093 GGCCTTGACTCAGCACATTGGCACCTTCACCAT
66 GGCCTTGACTCAGCACATTGGCACCTTCACCAT
2126 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
1 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
2191 GGCCTTGACTCAGCACATTGGCACCTTCACCAT
66 GGCCTTGACTCAGCACATTGGCACCTTCACCAT
* *
2224 TAAGCCCAATATAGCTGGCCTTGAATCAGCATATTGGCACTTTTATCTTTAAGTCCAATGTAGCT
1 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
2289 GGCCTTGACTCAGCACATTGGCA-CTTGCACCAT
66 GGCCTTGACTCAGCACATTGGCACCTT-CACCAT
2322 TAAGTCC-ATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
1 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
* *
2386 GGCCTTGACTCAGCACATTGGCACCTTCATCTT
66 GGCCTTGACTCAGCACATTGGCACCTTCACCAT
* * *
2419 TCAGTCCAATATAGCTGGCCTTGAATCAGCATATCGGCACATTTTCCATCTTTAAGTCCAATGTA
1 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCAC-CTTT--ATCTTTAAGTCCAATGTA
2484 GCTGGCCTTGACTCAGCACATTGGCACCTTCACCAT
63 GCTGGCCTTGACTCAGCACATTGGCACCTTCACCAT
2520 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
1 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
*
2585 GGCCTTGACTCAGCACAATGGCACCTTCACCAT
66 GGCCTTGACTCAGCACATTGGCACCTTCACCAT
* * *
2618 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCATCATCATCTTTAAGTCCAATGTAGCT
1 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
2683 GGCCTTGACTCAGCACATTGGCACCTTCACCAT
66 GGCCTTGACTCAGCACATTGGCACCTTCACCAT
2716 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
1 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
2781 GGCCTTGACTCAGCACATTGGCACCTTCACCAT
66 GGCCTTGACTCAGCACATTGGCACCTTCACCAT
* *
2814 TAAGCCCAATATAGCTGGCCTTGAATCAGCATATTGGCACTTTTATCTTTAAGTCCAATGTAGCT
1 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
2879 GGCCTTGACTCAGCACATTGGCA-CTTGCACCAT
66 GGCCTTGACTCAGCACATTGGCACCTT-CACCAT
2912 TAAGTCC-ATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
1 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
* *
2976 GGCCTTGACTCAGCACATTGGCACCTTCATCTT
66 GGCCTTGACTCAGCACATTGGCACCTTCACCAT
* * *
3009 TCAGTCCAATATAGCTGGCCTTGAATCAGCATATCGGCACATTTTCCATCTTTAAGTCCAATGTA
1 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCAC-CTTT--ATCTTTAAGTCCAATGTA
3074 GCTGGCCTTGACTCAGCACATTGGCACCTTCACCAT
63 GCTGGCCTTGACTCAGCACATTGGCACCTTCACCAT
3110 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
1 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
*
3175 GGCCTTGACTCAGCACAATGGCACCTTCACCAT
66 GGCCTTGACTCAGCACATTGGCACCTTCACCAT
* * *
3208 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCATCATCATCTTTAAGTCCAATGTAGCT
1 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
3273 GGCCTTGACTCAGCACATTGGCACCTTCACCAT
66 GGCCTTGACTCAGCACATTGGCACCTTCACCAT
3306 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
1 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
3371 GGCCTTGACTCAGCACATTGGCACCTTCACCAT
66 GGCCTTGACTCAGCACATTGGCACCTTCACCAT
* *
3404 TAAGCCCAATATAGCTGGCCTTGAATCAGCATATTGGCACTTTTATCTTTAAGTCCAATGTAGCT
1 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
3469 GGCCTTGACTCAGCACATTGGCA-CTTGCACCAT
66 GGCCTTGACTCAGCACATTGGCACCTT-CACCAT
3502 TAAGTCC-ATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
1 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
* *
3566 GGCCTTGACTCAGCACATTGGCACCTTCATCTT
66 GGCCTTGACTCAGCACATTGGCACCTTCACCAT
* * *
3599 TCAGTCCAATATAGCTGGCCTTGAATCAGCATATCGGCACATTTTCCATCTTTAAGTCCAATGTA
1 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCAC-CTTT--ATCTTTAAGTCCAATGTA
3664 GCTGGCCTTGACTCAGCACATTGGCACCTTCACCAT
63 GCTGGCCTTGACTCAGCACATTGGCACCTTCACCAT
3700 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
1 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
3765 GGCCTTGACTCAGCACATTGGCACCTTCACCAT
66 GGCCTTGACTCAGCACATTGGCACCTTCACCAT
* *
3798 TAAGCCCAATATAGCTGGCCTTGAATCAGCATATTGGCACTTTTATCTTTAAGTCCAATGTAGCT
1 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
*
3863 GGCCTTGACTCAGCACATTGGCA-TTTGCACCAT
66 GGCCTTGACTCAGCACATTGGCACCTT-CACCAT
3896 TAAGTCC-ATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
1 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
* * *
3960 GGCCTTGAATCAGCACATTGGCACCTTCATCTT
66 GGCCTTGACTCAGCACATTGGCACCTTCACCAT
* * *
3993 TCAGTCCAATATAGCTGGCCTTGAATCAGCATATCGGCACATTTTCCATCTTTAAGTCCAATGTA
1 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCAC-CTTT--ATCTTTAAGTCCAATGTA
4058 GCTGGCCTTGACTCAGCACATTGGCACCTTCACCAT
63 GCTGGCCTTGACTCAGCACATTGGCACCTTCACCAT
* * * * *
4094 TAAGCCCAATATAGCTGGCCTTGAATTAGCATATTGGCATCATCATCTTTAAGTCCAATGTAGCT
1 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
4159 GGCCTTGACTCAGCACATTGGCACCTTCACCAT
66 GGCCTTGACTCAGCACATTGGCACCTTCACCAT
* *
4192 TAAGCCCAATATAGCTGGCCTTGAATCAGCATATTGGCACTTTTATCTTTAAGTCCAATGTAGCT
1 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
4257 GGCCTTGACTCAGCACATTGGCA-CTTGCACCAT
66 GGCCTTGACTCAGCACATTGGCACCTT-CACCAT
4290 TAAGTCC-ATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
1 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
*
4354 GGCCTTGACTTAGCACATTGGCACCTTCACCAT
66 GGCCTTGACTCAGCACATTGGCACCTTCACCAT
4387 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
1 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
4452 GGCCTTGACTCAGCACATTGGCACCTTCACCAT
66 GGCCTTGACTCAGCACATTGGCACCTTCACCAT
* * *
4485 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCATCATCATCTTTAAGTCCAATGTAGCT
1 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
4550 GGCCTTGACTCAGCACATTGGCACCTTCACCAT
66 GGCCTTGACTCAGCACATTGGCACCTTCACCAT
*
4583 TAAGTCCAATATAGCTGGCCTTGACTCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
1 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
4648 GGCCTTGACTCAGCACATTGGCACCTTCACCAT
66 GGCCTTGACTCAGCACATTGGCACCTTCACCAT
*
4681 TAAGCCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
1 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
* *
4746 GGCCTTGACTCAGCACATTGGCACCTTCATCTT
66 GGCCTTGACTCAGCACATTGGCACCTTCACCAT
* * *
4779 TCAGTCCAATATAGCTGGCCTTGAATCAGCATATCGGCACATTTTCCATCTTTAAGTCCAATGTA
1 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCAC-CTTT--ATCTTTAAGTCCAATGTA
4844 GCTGGCCTTGACTCAGCACATTGGCACCTTCACCAT
63 GCTGGCCTTGACTCAGCACATTGGCACCTTCACCAT
* *
4880 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATCGGCACATTTTCCATCTTTAAGTCCAATGTA
1 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCAC-CTTT--ATCTTTAAGTCCAATGTA
4945 GCTGGCCTTGACTCAGCACATTGGCACCTTCACCAT
63 GCTGGCCTTGACTCAGCACATTGGCACCTTCACCAT
4981 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
1 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
5046 GGCCTTGACTCAGCACATTGGCACCTTCACCAT
66 GGCCTTGACTCAGCACATTGGCACCTTCACCAT
* *
5079 TAAGCCCAATATAGCTGGCCTTGAATCAGCATATTGGCACTTTTATCTTTAAGTCCAATGTAGCT
1 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
*
5144 GGCCTTGACTCAGCACATTGGCA-TTTGCACCAT
66 GGCCTTGACTCAGCACATTGGCACCTT-CACCAT
5177 TAAGTCC-ATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
1 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
* *
5241 GGCCTTGAATCAGCACATTGGCA---T---CTT
66 GGCCTTGACTCAGCACATTGGCACCTTCACCAT
* * * * *
5268 TAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCTTCATCTTTAAGTCCAATATAGCT
1 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
* * * * *
5333 GGCCTTGAATCAGCATATCGGCACCTTTTCCATCTT
66 GGCCTTGACTCAGCACATTGGCACC--TT-CACCAT
* * *
5369 TAAGTTCAATGTAGCTGGCCTTGAATCAGCACATTG
1 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTG
5405 ACATCATTTT
Statistics
Matches: 3202, Mismatches: 133, Indels: 81
0.94 0.04 0.02
Matches are distributed among these distances:
91 9 0.00
92 73 0.02
95 1 0.00
97 543 0.17
98 1964 0.61
99 15 0.00
100 13 0.00
101 584 0.18
ACGTcount: A:0.25, C:0.26, G:0.18, T:0.31
Consensus pattern (98 bp):
TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
GGCCTTGACTCAGCACATTGGCACCTTCACCAT
Found at i:3053 original size:590 final size:590
Alignment explanation
Indices: 1930--5399 Score: 6105
Period size: 590 Copynumber: 5.9 Consensus size: 590
1920 GCAACCCTTC
* * *
1930 TAAGCCCAATATAGCTGGTCC-TGAATCAGCATATTGGCACCTTCATCTTTAAGTCCAATGTGGC
1 TAAGTCCAATATAGCTGG-CCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGC
1994 TGGCCTTGACTCAGCACATTGGCACCTTCACCATTAAGTCCAATATAGCTGGCCTTGAATCAGCA
65 TGGCCTTGACTCAGCACATTGGCACCTTCACCATTAAGTCCAATATAGCTGGCCTTGAATCAGCA
2059 TATTGGCATCATCATCTTTAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCTTCACC
130 TATTGGCATCATCATCTTTAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCTTCACC
2124 ATTAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAG
195 ATTAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAG
2189 CTGGCCTTGACTCAGCACATTGGCACCTTCACCATTAAGCCCAATATAGCTGGCCTTGAATCAGC
260 CTGGCCTTGACTCAGCACATTGGCACCTTCACCATTAAGCCCAATATAGCTGGCCTTGAATCAGC
2254 ATATTGGCACTTTTATCTTTAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACTTGCAC
325 ATATTGGCACTTTTATCTTTAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACTT-CAC
2319 CATTAAGTCC-ATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTA
389 CATTAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTA
2383 GCTGGCCTTGACTCAGCACATTGGCACCTTCATCTTTCAGTCCAATATAGCTGGCCTTGAATCAG
454 GCTGGCCTTGACTCAGCACATTGGCACCTTCATCTTTCAGTCCAATATAGCTGGCCTTGAATCAG
2448 CATATCGGCACATTTTCCATCTTTAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCT
519 CATATCGGCACATTTTCCATCTTTAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCT
2513 TCACCAT
584 TCACCAT
2520 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
1 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
*
2585 GGCCTTGACTCAGCACAATGGCACCTTCACCATTAAGTCCAATATAGCTGGCCTTGAATCAGCAT
66 GGCCTTGACTCAGCACATTGGCACCTTCACCATTAAGTCCAATATAGCTGGCCTTGAATCAGCAT
2650 ATTGGCATCATCATCTTTAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCTTCACCA
131 ATTGGCATCATCATCTTTAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCTTCACCA
2715 TTAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGC
196 TTAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGC
2780 TGGCCTTGACTCAGCACATTGGCACCTTCACCATTAAGCCCAATATAGCTGGCCTTGAATCAGCA
261 TGGCCTTGACTCAGCACATTGGCACCTTCACCATTAAGCCCAATATAGCTGGCCTTGAATCAGCA
2845 TATTGGCACTTTTATCTTTAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACTTGCACC
326 TATTGGCACTTTTATCTTTAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACTT-CACC
2910 ATTAAGTCC-ATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAG
390 ATTAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAG
2974 CTGGCCTTGACTCAGCACATTGGCACCTTCATCTTTCAGTCCAATATAGCTGGCCTTGAATCAGC
455 CTGGCCTTGACTCAGCACATTGGCACCTTCATCTTTCAGTCCAATATAGCTGGCCTTGAATCAGC
3039 ATATCGGCACATTTTCCATCTTTAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCTT
520 ATATCGGCACATTTTCCATCTTTAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCTT
3104 CACCAT
585 CACCAT
3110 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
1 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
*
3175 GGCCTTGACTCAGCACAATGGCACCTTCACCATTAAGTCCAATATAGCTGGCCTTGAATCAGCAT
66 GGCCTTGACTCAGCACATTGGCACCTTCACCATTAAGTCCAATATAGCTGGCCTTGAATCAGCAT
3240 ATTGGCATCATCATCTTTAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCTTCACCA
131 ATTGGCATCATCATCTTTAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCTTCACCA
3305 TTAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGC
196 TTAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGC
3370 TGGCCTTGACTCAGCACATTGGCACCTTCACCATTAAGCCCAATATAGCTGGCCTTGAATCAGCA
261 TGGCCTTGACTCAGCACATTGGCACCTTCACCATTAAGCCCAATATAGCTGGCCTTGAATCAGCA
3435 TATTGGCACTTTTATCTTTAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACTTGCACC
326 TATTGGCACTTTTATCTTTAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACTT-CACC
3500 ATTAAGTCC-ATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAG
390 ATTAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAG
3564 CTGGCCTTGACTCAGCACATTGGCACCTTCATCTTTCAGTCCAATATAGCTGGCCTTGAATCAGC
455 CTGGCCTTGACTCAGCACATTGGCACCTTCATCTTTCAGTCCAATATAGCTGGCCTTGAATCAGC
3629 ATATCGGCACATTTTCCATCTTTAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCTT
520 ATATCGGCACATTTTCCATCTTTAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCTT
3694 CACCAT
585 CACCAT
3700 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
1 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
*
3765 GGCCTTGACTCAGCACATTGGCACCTTCACCATTAAGCCCAATATAGCTGGCCTTGAATCAGCAT
66 GGCCTTGACTCAGCACATTGGCACCTTCACCATTAAGTCCAATATAGCTGGCCTTGAATCAGCAT
* * *
3830 ATTGGCA-CTTTTATCTTTAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCA-TTTGCAC
131 ATTGGCATC-ATCATCTTTAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCTT-CAC
3893 CATTAAGTCC-ATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTA
194 CATTAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTA
* * * * *
3957 GCTGGCCTTGAATCAGCACATTGGCACCTTCATCTTTCAGTCCAATATAGCTGGCCTTGAATCAG
259 GCTGGCCTTGACTCAGCACATTGGCACCTTCACCATTAAGCCCAATATAGCTGGCCTTGAATCAG
*
4022 CATATCGGCACATTTTCCATCTTTAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCT
324 CATATTGGCAC-TTTT--ATCTTTAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCA-CT
* * * * *
4087 TCACCATTAAGCCCAATATAGCTGGCCTTGAATTAGCATATTGGCATCATCATCTTTAAGTCCAA
385 TCACCATTAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAA
* * * *
4152 TGTAGCTGGCCTTGACTCAGCACATTGGCACCTTCACCATTAAGCCCAATATAGCTGGCCTTGAA
450 TGTAGCTGGCCTTGACTCAGCACATTGGCACCTTCATCTTTCAGTCCAATATAGCTGGCCTTGAA
*
4217 TCAGCATATTGGCAC-TTTT--ATCTTTAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGC
515 TCAGCATATCGGCACATTTTCCATCTTTAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGC
4279 A-CTTGCACCAT
580 ACCTT-CACCAT
4290 TAAGTCC-ATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
1 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
*
4354 GGCCTTGACTTAGCACATTGGCACCTTCACCATTAAGTCCAATATAGCTGGCCTTGAATCAGCAT
66 GGCCTTGACTCAGCACATTGGCACCTTCACCATTAAGTCCAATATAGCTGGCCTTGAATCAGCAT
* * *
4419 ATTGGCACCTTTATCTTTAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCTTCACCA
131 ATTGGCATCATCATCTTTAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCTTCACCA
* * *
4484 TTAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCATCATCATCTTTAAGTCCAATGTAGC
196 TTAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGC
* *
4549 TGGCCTTGACTCAGCACATTGGCACCTTCACCATTAAGTCCAATATAGCTGGCCTTGACTCAGCA
261 TGGCCTTGACTCAGCACATTGGCACCTTCACCATTAAGCCCAATATAGCTGGCCTTGAATCAGCA
*
4614 TATTGGCACCTTTATCTTTAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCTTCACC
326 TATTGGCACTTTTATCTTTAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCA-CTTCACC
*
4679 ATTAAGCCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAG
390 ATTAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAG
4744 CTGGCCTTGACTCAGCACATTGGCACCTTCATCTTTCAGTCCAATATAGCTGGCCTTGAATCAGC
455 CTGGCCTTGACTCAGCACATTGGCACCTTCATCTTTCAGTCCAATATAGCTGGCCTTGAATCAGC
4809 ATATCGGCACATTTTCCATCTTTAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCTT
520 ATATCGGCACATTTTCCATCTTTAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCTT
4874 CACCAT
585 CACCAT
* *
4880 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATCGGCACATTTTCCATCTTTAAGTCCAATGTA
1 TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCAC-CTTT--ATCTTTAAGTCCAATGTA
4945 GCTGGCCTTGACTCAGCACATTGGCACCTTCACCATTAAGTCCAATATAGCTGGCCTTGAATCAG
63 GCTGGCCTTGACTCAGCACATTGGCACCTTCACCATTAAGTCCAATATAGCTGGCCTTGAATCAG
* * *
5010 CATATTGGCACCTTTATCTTTAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCTTCA
128 CATATTGGCATCATCATCTTTAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCTTCA
* *
5075 CCATTAAGCCCAATATAGCTGGCCTTGAATCAGCATATTGGCACTTTTATCTTTAAGTCCAATGT
193 CCATTAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGT
* *
5140 AGCTGGCCTTGACTCAGCACATTGGCA-TTTGCACCATTAAGTCC-ATATAGCTGGCCTTGAATC
258 AGCTGGCCTTGACTCAGCACATTGGCACCTT-CACCATTAAGCCCAATATAGCTGGCCTTGAATC
* *
5203 AGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGCA--T-
322 AGCATATTGGCACTTTTATCTTTAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACTTC
* * * * * *
5265 --CTTTAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCTTCATCTTTAAGTCCAATA
387 ACCATTAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATG
* * * * * *
5328 TAGCTGGCCTTGAATCAGCATATCGGCACCTTTTCCATCTTTAAGTTCAATGTAGCTGGCCTTGA
452 TAGCTGGCCTTGACTCAGCACATTGGCACC--TT-CATCTTTCAGTCCAATATAGCTGGCCTTGA
5393 ATCAGCA
514 ATCAGCA
5400 CATTGACATC
Statistics
Matches: 2785, Mismatches: 71, Indels: 48
0.96 0.02 0.02
Matches are distributed among these distances:
587 266 0.10
588 4 0.00
589 324 0.12
590 1643 0.59
591 34 0.01
592 63 0.02
593 204 0.07
594 247 0.09
ACGTcount: A:0.25, C:0.26, G:0.18, T:0.31
Consensus pattern (590 bp):
TAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGCT
GGCCTTGACTCAGCACATTGGCACCTTCACCATTAAGTCCAATATAGCTGGCCTTGAATCAGCAT
ATTGGCATCATCATCTTTAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCTTCACCA
TTAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGC
TGGCCTTGACTCAGCACATTGGCACCTTCACCATTAAGCCCAATATAGCTGGCCTTGAATCAGCA
TATTGGCACTTTTATCTTTAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACTTCACCA
TTAAGTCCAATATAGCTGGCCTTGAATCAGCATATTGGCACCTTTATCTTTAAGTCCAATGTAGC
TGGCCTTGACTCAGCACATTGGCACCTTCATCTTTCAGTCCAATATAGCTGGCCTTGAATCAGCA
TATCGGCACATTTTCCATCTTTAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCTTC
ACCAT
Found at i:5281 original size:43 final size:43
Alignment explanation
Indices: 5220--5409 Score: 191
Period size: 43 Copynumber: 4.1 Consensus size: 43
5210 TGGCACCTTT
5220 ATCTTTAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGC
1 ATCTTTAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGC
*
5263 ATCTTTAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACCTTC
1 ATCTTTAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGG------C
* **
5312 ATCTTTAAGTCCAATATAGCTGGCCTTGAATCAGCATATCGGCACCTTTTCC
1 ATCTTTAAGTCCAATGTAGCTGGCCTTGAATCAGC--A----CA---TTGGC
* *
5364 ATCTTTAAGTTCAATGTAGCTGGCCTTGAATCAGCACATTGAC
1 ATCTTTAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGC
5407 ATC
1 ATC
5410 ATTTTTCATC
Statistics
Matches: 123, Mismatches: 9, Indels: 30
0.76 0.06 0.19
Matches are distributed among these distances:
43 47 0.38
46 2 0.02
49 34 0.28
50 1 0.01
51 1 0.01
52 34 0.28
55 2 0.02
58 2 0.02
ACGTcount: A:0.25, C:0.25, G:0.18, T:0.32
Consensus pattern (43 bp):
ATCTTTAAGTCCAATGTAGCTGGCCTTGAATCAGCACATTGGC
Found at i:5444 original size:56 final size:53
Alignment explanation
Indices: 5262--5452 Score: 194
Period size: 49 Copynumber: 3.6 Consensus size: 53
5252 AGCACATTGG
* * * *
5262 CATCTTTAAGTCCAATGTAGCTGGCCTTGACTCAGCACATTGGCACC---T-T
1 CATCTTTAAGTCCAATATAGCTGGCCTTGAATCAGCACATCGACACCTTTTCT
* *
5311 CATCTTTAAGTCCAATATAGCTGGCCTTGAATCAGCATATCGGCACCTTTTC-
1 CATCTTTAAGTCCAATATAGCTGGCCTTGAATCAGCACATCGACACCTTTTCT
* * * *
5363 CATCTTTAAGTTCAATGTAGCTGGCCTTGAATCAGCACATTGACATCATTTTTCAT
1 CATCTTTAAGTCCAATATAGCTGGCCTTGAATCAGCACATCGACA-C-CTTTTC-T
* * * *
5419 CATCTTTAAGCCCAATATCGTTGGCCATGAATCA
1 CATCTTTAAGTCCAATATAGCTGGCCTTGAATCA
5453 ACATATTGGC
Statistics
Matches: 118, Mismatches: 16, Indels: 9
0.83 0.11 0.06
Matches are distributed among these distances:
49 43 0.36
52 41 0.35
53 1 0.01
54 5 0.04
56 28 0.24
ACGTcount: A:0.26, C:0.26, G:0.16, T:0.33
Consensus pattern (53 bp):
CATCTTTAAGTCCAATATAGCTGGCCTTGAATCAGCACATCGACACCTTTTCT
Found at i:7291 original size:420 final size:420
Alignment explanation
Indices: 6512--7350 Score: 1356
Period size: 420 Copynumber: 2.0 Consensus size: 420
6502 AAGGCAAAAT
* * * *
6512 ACATTGCCTTTGTTAGGATACCCAATATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCACG
1 ACATTGCCATCGTTAAGATACCCAACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCACG
* *
6577 TTGTTTTTGATAGAATCAATGTTTGTCTCTTAAATAAGCCAAACATTAATACTCAAACTAATCCT
66 TCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCAAACATTAATACTCAAACTAATCCT
* * *
6642 CATTCCTTTTAGATTTAGGCACCATAAACATAGTTTTCTCATTAGGATACACGATATTGATGCTT
131 CATTCCTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGAATACACGATACTGATGCTT
6707 TGGTTTCGCAACAAAGGCTTTCTTCCCACCAATCGTTGTAAAGTCAAAGTACGTGCCTCAAATGA
196 TGGTTTCGCAACAAAGGCTTTCTTCCCACCAATCGTTGTAAAGTCAAAGTACGTGCCTCAAATGA
*
6772 GAGAAATATGGATTCTAGTAATGATCTTCATTCTTTTTCTGATAAAGCACTACAAACACATTCTC
261 GACAAATATGGATTCTAGTAATGATCTTCATTCTTTTTCTGATAAAGCACTACAAACACATTCTC
* *** *
6837 CTCTTTAAGACAAAAGACATTGAATTCTTTCTTTTGCGTGGAAATCTTTTCTTCGCCCTATTTTC
326 CTCATTAAGACAAAAGACATTGAATTCTTTCTTTTGCCAAGAAATCTTTTCTTCGCCCAATTTTC
6902 CTTAAAATGAAAGTTCAACCCTTGAATAAC
391 CTTAAAATGAAAGTTCAACCCTTGAATAAC
* * *
6932 ACATTGCCATCGTTAAGATACCCGACATTGATGCTTTGGTGTCTTAAGAAAAGCTTTTCTTCCCG
1 ACATTGCCATCGTTAAGATACCCAACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCACG
* *
6997 TCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATACGCCGAACATTAATACTCAAACTAATCCT
66 TCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCAAACATTAATACTCAAACTAATCCT
* * *
7062 CATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGAATACATGGTACTGATGCTT
131 CATTCCTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGAATACACGATACTGATGCTT
*
7127 TGGTTTCGCAACAAAGGCTTTCTTCCCACCAATCGTTGTAAAGTCAAAGTACGTGCTTCAAATGA
196 TGGTTTCGCAACAAAGGCTTTCTTCCCACCAATCGTTGTAAAGTCAAAGTACGTGCCTCAAATGA
* * * *
7192 GACAAATATGTATTCTAGTAATGATCTTCATTCTTTTTCTGATAAAGCGCTATAAACGCATTCTC
261 GACAAATATGGATTCTAGTAATGATCTTCATTCTTTTTCTGATAAAGCACTACAAACACATTCTC
* * * *
7257 CTGATTAGGAGAAAAGACATTGAAGTT-TTTCTTTTTCCAAGAAATCTTTTCTTCGCCCAATTTT
326 CTCATTAAGACAAAAGACATTGAA-TTCTTTCTTTTGCCAAGAAATCTTTTCTTCGCCCAATTTT
* *
7321 CTTTAAAATGAAAGTTCATCCCTTGAATAA
390 CCTTAAAATGAAAGTTCAACCCTTGAATAA
7351 GACAAGCATT
Statistics
Matches: 384, Mismatches: 34, Indels: 2
0.91 0.08 0.00
Matches are distributed among these distances:
420 382 0.99
421 2 0.01
ACGTcount: A:0.30, C:0.20, G:0.14, T:0.36
Consensus pattern (420 bp):
ACATTGCCATCGTTAAGATACCCAACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCACG
TCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCAAACATTAATACTCAAACTAATCCT
CATTCCTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGAATACACGATACTGATGCTT
TGGTTTCGCAACAAAGGCTTTCTTCCCACCAATCGTTGTAAAGTCAAAGTACGTGCCTCAAATGA
GACAAATATGGATTCTAGTAATGATCTTCATTCTTTTTCTGATAAAGCACTACAAACACATTCTC
CTCATTAAGACAAAAGACATTGAATTCTTTCTTTTGCCAAGAAATCTTTTCTTCGCCCAATTTTC
CTTAAAATGAAAGTTCAACCCTTGAATAAC
Found at i:7821 original size:476 final size:476
Alignment explanation
Indices: 6929--8038 Score: 1729
Period size: 476 Copynumber: 2.3 Consensus size: 476
6919 ACCCTTGAAT
* *
6929 AACACATTGCCATCGTTAAGATACCCGACATTGATGCTTTGGTGTCTTAAGAAAAGCTTTTCTTC
1 AACACATTGCCTTCGTTAAGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTC
* *
6994 CCGTCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATACGCCGAACATTAATACTCAAACTAAT
66 GCGTCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAAT
* *
7059 CCTCATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGAATACATGGTACTGATG
131 CCTCATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGAATACACGATACTGATG
*
7124 CTTTGGTTTCGCAACAAAGGCTTTCTTCCCACCAATCGTTGTAAAGTCAAAGTACGTGCTTCAAA
196 CTTTGGTTTCGCAACAAAGGCTTTCTTCCCACCAATCGTTGTAAAGTCAAAGTACGTGCCTCAAA
* * * * * *
7189 TGAGACAAATATGTATTCTAGTAATGATCTTCATTCTTTTTCTGATAAAGCGCTATAAACGCATT
261 TGAGACAAATACGGATTCTAGTAATAATCTTCATTCTTTTTCTGATAAAGCACTACAAACACATT
* *
7254 CTCCTGATTAGGAGAAAAGACATTGAAGTTTTTCTTTTTCCAAGAAATCTTTTCTTCGCCCAATT
326 CTCCTCATTAGGACAAAAGACATTGAAGTTTTTCTTTTTCCAAGAAATCTTTTCTTCGCCCAATT
** ** * *
7319 TTCTTTAAAATGAAAGTTCATCCCTTGAATAAGACAAGCATTGCTTCTCCTAATAGTCTCCTTTC
391 TTCCGTAAAATGAAAGTTCATCCCTTGAATAAGACAAGCACCGATTCTCCTAACAGTCTCCTTTC
7384 TTTTCAAGATTGGGAAGCCAA
456 TTTTCAAGATTGGGAAGCCAA
*
7405 AACACATTGCCTTCGTTAAGATACCCGACATTGAAGCTTTGGTGTCTCAAGAAAAGCTTTTCTTC
1 AACACATTGCCTTCGTTAAGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTC
* * * * *
7470 GCGTCGTTTTTGATAGAACCAACGTTTGCCTCTTAAAAAAGCCCAACATTAAAACTCAAACTAAT
66 GCGTCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAAT
* * *
7535 CCTCATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATGCACGATATTGATG
131 CCTCATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGAATACACGATACTGATG
* * * *
7600 CTTTGGTTTCGCAACAAAGGCTTTTTTCCCACTAATCGTTGTAAAGTCTAAGTTCGTGCCTCAAA
196 CTTTGGTTTCGCAACAAAGGCTTTCTTCCCACCAATCGTTGTAAAGTCAAAGTACGTGCCTCAAA
*
7665 TGAGACAAATACGGATTCTAGTAATAATCTTCTTTCTTTTTCTGATAAAGCACTACAAACACATT
261 TGAGACAAATACGGATTCTAGTAATAATCTTCATTCTTTTTCTGATAAAGCACTACAAACACATT
* *** *
7730 CTCCTCTTTAGGACAAAAGACATTGAAGTTTTTCTTTTGT-GTGGAAATCTTTTCTTCGCCCTAT
326 CTCCTCATTAGGACAAAAGACATTGAAGTTTTTCTTTT-TCCAAGAAATCTTTTCTTCGCCCAAT
*
7794 TTTCCGTAAAATGAAAGTTCATCCCTTGTATAAGACAAGCACCGATTCTCCTAACAGTCTCCTTT
390 TTTCCGTAAAATGAAAGTTCATCCCTTGAATAAGACAAGCACCGATTCTCCTAACAGTCTCCTTT
7859 CTTTTCAAGATTGGGAAGCCAA
455 CTTTTCAAGATTGGGAAGCCAA
* * * * * *
7881 AACACATTCCCATT-GTTAGGATACCCGACATTGATGTTTTAGTATCTCAAGAAAAGCTTTTCCT
1 AACACATTGCC-TTCGTTAAGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTT
* * * *
7945 CGCTTCATTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGGCGAACATTAATACGCAAACTAA
65 CGCGTCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAA
8010 TCCTCATTCTTTTTAGATTTAGGCACCAT
130 TCCTCATTCTTTTTAGATTTAGGCACCAT
8039 TGTAGACACC
Statistics
Matches: 575, Mismatches: 57, Indels: 4
0.90 0.09 0.01
Matches are distributed among these distances:
476 572 0.99
477 3 0.01
ACGTcount: A:0.30, C:0.21, G:0.14, T:0.35
Consensus pattern (476 bp):
AACACATTGCCTTCGTTAAGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTC
GCGTCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAAT
CCTCATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGAATACACGATACTGATG
CTTTGGTTTCGCAACAAAGGCTTTCTTCCCACCAATCGTTGTAAAGTCAAAGTACGTGCCTCAAA
TGAGACAAATACGGATTCTAGTAATAATCTTCATTCTTTTTCTGATAAAGCACTACAAACACATT
CTCCTCATTAGGACAAAAGACATTGAAGTTTTTCTTTTTCCAAGAAATCTTTTCTTCGCCCAATT
TTCCGTAAAATGAAAGTTCATCCCTTGAATAAGACAAGCACCGATTCTCCTAACAGTCTCCTTTC
TTTTCAAGATTGGGAAGCCAA
Found at i:8321 original size:33 final size:33
Alignment explanation
Indices: 8284--8350 Score: 98
Period size: 33 Copynumber: 2.0 Consensus size: 33
8274 TTCAACGATT
8284 TGTATCGATACATAAAATGTTGTATCGATACAA
1 TGTATCGATACATAAAATGTTGTATCGATACAA
*** *
8317 TGTATCGATACATATTTTTTTGTATCGATACAA
1 TGTATCGATACATAAAATGTTGTATCGATACAA
8350 T
1 T
8351 TTAAGCTACT
Statistics
Matches: 30, Mismatches: 4, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
33 30 1.00
ACGTcount: A:0.34, C:0.12, G:0.13, T:0.40
Consensus pattern (33 bp):
TGTATCGATACATAAAATGTTGTATCGATACAA
Found at i:8322 original size:13 final size:13
Alignment explanation
Indices: 8304--8328 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
8294 CATAAAATGT
8304 TGTATCGATACAA
1 TGTATCGATACAA
8317 TGTATCGATACA
1 TGTATCGATACA
8329 TATTTTTTTG
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.36, C:0.16, G:0.16, T:0.32
Consensus pattern (13 bp):
TGTATCGATACAA
Found at i:8479 original size:51 final size:52
Alignment explanation
Indices: 8424--8543 Score: 206
Period size: 52 Copynumber: 2.3 Consensus size: 52
8414 CACTGATCTT
* *
8424 TGTATCGATACATGCAGGC-AATTTGCCTAGATGTATCGATACATTATAAAA
1 TGTATCGATACATGCAGGCAAATTTGCCCAGATGTATCGATACACTATAAAA
*
8475 TGTATCGATACATGCAGGCAAATTTGCCCAGATGTATCGATACACTATTAAA
1 TGTATCGATACATGCAGGCAAATTTGCCCAGATGTATCGATACACTATAAAA
8527 TGTATCGATACATGCAG
1 TGTATCGATACATGCAG
8544 ATAAATTTTC
Statistics
Matches: 65, Mismatches: 3, Indels: 1
0.94 0.04 0.01
Matches are distributed among these distances:
51 19 0.29
52 46 0.71
ACGTcount: A:0.34, C:0.17, G:0.18, T:0.30
Consensus pattern (52 bp):
TGTATCGATACATGCAGGCAAATTTGCCCAGATGTATCGATACACTATAAAA
Found at i:12840 original size:476 final size:476
Alignment explanation
Indices: 11191--28840 Score: 30338
Period size: 476 Copynumber: 37.1 Consensus size: 476
11181 TGCCTAGCCC
11191 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
1 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
11256 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
66 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
11321 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
131 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
11386 TTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTG
196 TTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTG
11451 GTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAGA
261 GTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAGA
11516 CAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCAT
326 CAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCAT
11581 CTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCCT
391 CTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCCT
11646 TAAAATGAAGGTTCATCCCTT
456 TAAAATGAAGGTTCATCCCTT
11667 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
1 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
11732 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
66 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
11797 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
131 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
*
11862 TTAC-ATTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
196 TT-CTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
* * * * * * *
11926 GGTTTCGTAACAAAGGCTTTCTCCCCACCAATCGTTGTAAAGTCTAAGTTCGTGCCTCAAATGAG
260 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
* * *
11991 AC-AATATGGATTCTAGTAATGATCTTCATTCTTTTTCTGATAAAGCACTACAAACACATTCTCC
325 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
* * * * *
12055 TCTTTAGTACAAAAGACATTGAAGTTTTTCTTTTGCCTGGAAACCTTTTC-TT-CATCTTATTTT
390 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGC-TC-TATTTT
*
12118 CCTTAAAATGAAAGTTCATCCCTT
453 CCTTAAAATGAAGGTTCATCCCTT
* * * *
12142 GACTAAGAGAAGCATCGA-TTCTCTTAACAGTCTCCTTTCTTTTCAAGATT-GGAAGCCAAAACA
1 GAATAAGACAAGCATC-ATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACA
12205 CATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGT
65 CATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGT
* * * * *
12270 CGTTTTTAACAGAATCAATGTTTGTCTCTTAAATATGCCGTACATTAATACTCAAACTAATCCTC
130 CGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTC
12335 ATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
195 ATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
12400 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
260 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
12465 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
325 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
12530 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCC
390 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCC
12595 TTAAAATGAAGGTTCATCCCTT
455 TTAAAATGAAGGTTCATCCCTT
12617 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
1 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
*
12682 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTAAAGAAAAGCTTTTCTTCGCGTC
66 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
12747 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
131 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
*
12812 TTAC-ATTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
196 TT-CTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
* * * * * *
12876 GGTTTCGCAACAAAGGCTTTCTCCCCACCAATCGTTGTAAAGTCTAAGTTCGTGCCTCAAATGAG
260 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
** * *
12941 AC-AATATGGATTCTCGTAATGATCTTCATTCTTTTTCTGATAAAGCACTACAAACACATTCTCC
325 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
* * * *
13005 TCTTTAGGACAAAAGACATTGAAGTTTTTCTTTTGCCTGGAAACCTTTTC-TT-CATCTTATTTT
390 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGC-TC-TATTTT
*
13068 CCTTAAAATGAAAGTTCATCCCTT
453 CCTTAAAATGAAGGTTCATCCCTT
* * * * *
13092 GACTAAAAGAAGCATCGA-TTCTCCGAACAGTCTCCTTTCTTTTCAAGATT-GGAAGCCAAAACA
1 GAATAAGACAAGCATC-ATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACA
13155 CATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGT
65 CATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGT
* * * * *
13220 CGTTTTTAACAGAATCAATGTTTGTCTCTTAAATATGCTGAACATTAATACTCAAACTAATCCTC
130 CGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTC
13285 ATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
195 ATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
13350 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
260 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
13415 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
325 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
13480 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCC
390 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCC
13545 TTAAAATGAAGGTTCATCCCTT
455 TTAAAATGAAGGTTCATCCCTT
13567 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
1 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
13632 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
66 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
13697 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
131 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
13762 TTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTG
196 TTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTG
13827 GTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAGA
261 GTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAGA
13892 CAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCAT
326 CAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCAT
13957 CTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCCT
391 CTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCCT
14022 TAAAATGAAGGTTCATCCCTT
456 TAAAATGAAGGTTCATCCCTT
14043 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
1 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
14108 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
66 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
14173 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
131 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
* *
14238 TTAC-ATTTAAATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
196 TT-CTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
* * * * * *
14302 GGTTTCGCAACAAAGGCTTTCTCCCCACCAATCGTTGTAAAGTCTAAGTTCGTGCCTCAAATGAG
260 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
* * *
14367 AC-AATATGGATTCTAGTAATGATCTTCATTCTTTTTCTGATAAAGCACTACAAACACATTCTCC
325 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
* * * *
14431 TCTTTAGGACAAAAGACATTGAAGTTTTTCTTTTGCCTGGAAACCTTTTC-TT-CATCTTATTTT
390 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGC-TC-TATTTT
*
14494 CCTTAAAATGAAAGTTCATCCCTT
453 CCTTAAAATGAAGGTTCATCCCTT
* * * *
14518 GACTAAGAGAAGCATCGA-TTCTCTTAACAGTCTCCTTTCTTTTCAAGATT-GGAAGCCAAAACA
1 GAATAAGACAAGCATC-ATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACA
14581 CATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGT
65 CATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGT
* * * *
14646 CGTTTTTAACAGAATCAATGTTTGTCTCTTAAATATGCCGAACATTAATACTCAAACTAATCCTC
130 CGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTC
14711 ATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
195 ATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
* *
14776 GGTTTCGCAACAAAAGTTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
260 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
14841 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
325 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
14906 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCC
390 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCC
14971 TTAAAATGAAGGTTCATCCCTT
455 TTAAAATGAAGGTTCATCCCTT
14993 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
1 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
15058 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
66 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
15123 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
131 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
*
15188 TTAC-ATTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
196 TT-CTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
* * * * * *
15252 GGTTTCGCAACAAAGGCTTTCTCCCCACCAATCGTTGTAAAGTCTAAGTTCGTGCCTCAAATGAG
260 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
* * *
15317 AC-AATATGGATTCTAGTAATGATCTTCATTCTTTTTCTGATAAAGCACTACAAACACATTCTCC
325 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
* * * * * *
15381 TCTTTAGGACAAAAGACATTGAAGTTTTTCTTTTGCCTGGAAACCTTTTC-TT-CATATTCTTTT
390 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGC-T-CTATTTT
*
15444 CCTTAAAATGAAAGTTCATCCCTT
453 CCTTAAAATGAAGGTTCATCCCTT
* * * * *
15468 GACTAAGAGAATCATCGA-TTCTCCTAACAGTCTCCTTTCTTTTCAAGATT-AGAAGCCAAAACA
1 GAATAAGACAAGCATC-ATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACA
15531 CATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGT
65 CATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGT
* * * *
15596 CGTTTTTAACAGAATCAATGTTTGTCTCTTAAATATGCCGAACATTAATACTCAAACTAATCCTC
130 CGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTC
15661 ATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
195 ATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
15726 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
260 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
15791 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
325 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
*
15856 TCTGTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCC
390 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCC
15921 TTAAAATGAAGGTTCATCCCTT
455 TTAAAATGAAGGTTCATCCCTT
15943 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
1 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
16008 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
66 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
16073 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
131 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
*
16138 TTAC-ATTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
196 TT-CTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
* * * * * *
16202 GGTTTCGCAACAAAGGCTTTCTCCCCACCAATCGTTGTAAAGTCTAAGTTCGTGCCTCAAATGAG
260 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
* * *
16267 AC-AATATGGATTCTAGTAATGATCTTCATTCTTTTTCTGATAAAGCACTACAAACACATTCTCC
325 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
* * * *
16331 TCTTTAGGACAAAAGACATTGAAGTTTTTCTTTTGCCTGGAAACCTTTTC-TT-CATCTTATTTT
390 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGC-TC-TATTTT
*
16394 CCTTAAAATGAAAGTTCATCCCTT
453 CCTTAAAATGAAGGTTCATCCCTT
* * *
16418 GACTAAGAGAAGCATCGA-TTCTCCTAACAGTCTCCTTTCTTTTCAAGATT-GGAAGCCAAAACA
1 GAATAAGACAAGCATC-ATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACA
16481 CATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGT
65 CATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGT
* * * *
16546 CGTTTTTAACAGAATCAATGTTTGTCTCTTAAATATGCCGAACATTAATACTCAAACTAATCCTC
130 CGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTC
16611 ATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
195 ATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
16676 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
260 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
16741 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
325 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
* *
16806 TCTGTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCCAGAAAGCTTTTCTTTGCTCTATTTTCC
390 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCC
16871 TTAAAATGAAGGTTCATCCCTT
455 TTAAAATGAAGGTTCATCCCTT
16893 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
1 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
16958 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
66 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
*
17023 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTTA
131 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
17088 TTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTG
196 TTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTG
17153 GTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAGA
261 GTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAGA
17218 CAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCAT
326 CAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCAT
17283 CTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCCT
391 CTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCCT
17348 TAAAATGAAGGTTCATCCCTT
456 TAAAATGAAGGTTCATCCCTT
17369 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
1 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
*
17434 ATTGCCTTTGTTAGGATACCCCACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
66 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
17499 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
131 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
*
17564 TTAC-ATTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
196 TT-CTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
* * * * * *
17628 GGTTTCGCAACAAAGGCTTTCTCCCCACCAATCGTTGTAAAGTCTAAGTTCGTGCCTCAAATGAG
260 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
*
17693 AC-AATATGGATTCTAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
325 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
17757 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTC-TT-CATCTTATTTT
390 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGC-TC-TATTTT
**
17820 CCTTAAAATGAAATTTCATCCCTT
453 CCTTAAAATGAAGGTTCATCCCTT
* * * *
17844 GACTAAAAGAAGCATCGA-TTCTCCTAACAGTCTCCTTTCTTTTCAAGATT-GGAAGCCAAAACA
1 GAATAAGACAAGCATC-ATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACA
17907 CATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGT
65 CATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGT
* * * *
17972 CGTTTTTAACAGAATCAATGTTTGTCTCTTAAATATGCCGAACATTAATACTCAAACTAATCCTC
130 CGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTC
18037 ATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
195 ATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
18102 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
260 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
18167 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
325 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
*
18232 TCTTTAGGACAAAAGACTTTGCAGCTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCC
390 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCC
18297 TTAAAATGAAGGTTCATCCCTT
455 TTAAAATGAAGGTTCATCCCTT
18319 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
1 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
18384 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
66 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
18449 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
131 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
18514 TTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTG
196 TTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTG
18579 GTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAGA
261 GTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAGA
18644 CAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCAT
326 CAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCAT
18709 CTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCCT
391 CTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCCT
18774 TAAAATGAAGGTTCATCCCTT
456 TAAAATGAAGGTTCATCCCTT
18795 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
1 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
18860 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
66 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
18925 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
131 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
*
18990 TTAC-ATTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
196 TT-CTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
* * * * * *
19054 GGTTTCGCAACAAAGGCTTTCTCCCCACCAATCGTTGTAAAGTCTAAGTTCGTGCCTCAAATGAG
260 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
* * *
19119 AC-AATATGGATTCTAGTAATGATCTTCATTCTTTTTCTGATAAAGCACTACAAACACATTCTCC
325 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
* * * *
19183 TCTTTAGGACAAAAGACATTGAAGTTTTTCTTTTGCCTGGAAACCTTTTC-TT-CATCTTATTTT
390 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGC-TC-TATTTT
*
19246 CCTTAAAATGAAAGTTCATCCCTT
453 CCTTAAAATGAAGGTTCATCCCTT
* * *
19270 GACTAAGAGAAGCATCGA-TTCTCCTAACAGTCTCCTTTCTTTTCAAGATT-GGAAGCCAAAACA
1 GAATAAGACAAGCATC-ATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACA
19333 CATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGT
65 CATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGT
* * * *
19398 CGTTTTTAACAGAATCAATGTTTGTCTCTTAAATATGCCGAACATTAATACTCAAACTAATCCTC
130 CGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTC
19463 ATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
195 ATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
*
19528 GGTTTCGCAACAAAGGTTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
260 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
19593 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
325 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
19658 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCC
390 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCC
19723 TTAAAATGAAGGTTCATCCCTT
455 TTAAAATGAAGGTTCATCCCTT
19745 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
1 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
19810 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
66 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
19875 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
131 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
19940 TTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTG
196 TTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTG
20005 GTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAGA
261 GTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAGA
20070 CAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCAT
326 CAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCAT
20135 CTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCCT
391 CTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCCT
20200 TAAAATGAAGGTTCATCCCTT
456 TAAAATGAAGGTTCATCCCTT
20221 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
1 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
20286 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
66 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
20351 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
131 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
*
20416 TTAC-ATTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
196 TT-CTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
* * * * * ** *
20480 GGTTTCGCAACAAAGGCTTTCTCCCCACCAATCGTTGTAAAGTCTAAGTTCGTTTCTCAAATGAG
260 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
* * *
20545 AC-AATATGGATTCTAGTAATGATCTTCATTCTTTTTCTGATAAAGCACTACAAACACATTCTCC
325 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
* * * *
20609 TCTTTAGGACAAAAGACATTGAAGTTTTTCTTTTGCCTGGAAACCTTTTC-TT-CATCTTATTTT
390 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGC-TC-TATTTT
*
20672 CCTTAAAATGAAAGTTCATCCCTT
453 CCTTAAAATGAAGGTTCATCCCTT
* * * *
20696 GACTAAGAGAAGCATCGA-TTCTCTTAACAGTCTCCTTTCTTTTCAAGATT-GGAAGCCAAAACA
1 GAATAAGACAAGCATC-ATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACA
20759 CATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGT
65 CATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGT
* * * *
20824 CGTTTTTAACAGAATCAATGTTTGTCTCTTAAATATGCCGAACATTAATACTCAAACTAATCCTC
130 CGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTC
20889 ATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
195 ATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
*
20954 GGTTTCGCAACAAAGGTTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
260 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
21019 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
325 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
21084 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCC
390 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCC
21149 TTAAAATGAAGGTTCATCCCTT
455 TTAAAATGAAGGTTCATCCCTT
21171 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
1 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
21236 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
66 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
21301 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
131 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
*
21366 TTAC-ATTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
196 TT-CTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
* * * * *
21430 GGTTTCGCAACAAAGGCTTTCTCCCCACCAATCGTTGTAAAGTCTAAGTTTGTGCCTCAAATGAG
260 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
* * *
21495 AC-AATATGGATTCTAGTAATGATCTTCATTCTTTTTCTGATAAAGCACTACAAACACATTCTCC
325 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
* * * *
21559 TCTTTAGGACAAAAGACATTGAAGTTTTTCTTTTGCCTGGAAACCTTTTC-TT-CATCTTATTTT
390 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGC-TC-TATTTT
*
21622 CCTTAAAATGAAAGTTCATCCCTT
453 CCTTAAAATGAAGGTTCATCCCTT
* * * *
21646 GACTAAGAGAAGCATCGA-TTCTCTTAACAGTCTCCTTTCTTTTCAAGATT-GGAAGCCAAAACA
1 GAATAAGACAAGCATC-ATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACA
21709 CATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGT
65 CATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGT
* * * *
21774 CGTTTTTAACAGAATCAATGTTTGTCTCTTAAATATGCCGAACATTAATACTCAAACTAATCCTC
130 CGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTC
21839 ATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
195 ATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
*
21904 GGTTTCGCAACAAAGGTTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
260 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
21969 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
325 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
22034 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCC
390 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCC
22099 TTAAAATGAAGGTTCATCCCTT
455 TTAAAATGAAGGTTCATCCCTT
22121 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
1 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
22186 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
66 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
22251 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
131 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
* *
22316 TTAC-ATTTAGATTTAGGCATCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
196 TT-CTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
* * * * * *
22380 GGTTTCGCAACAAAGGCTTTCTCCCCACCAATCGTTGTAAAGTCTAAGTTCGTGCCTCAAATGAG
260 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
* * *
22445 AC-AATATGGATTCTAGTAATGATCTTCATTCTTTTTCTGATAAAGCACTACAAACACATTCTCC
325 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
* * * *
22509 TCTTTAGGACAAAAGACATTGAAGTTTTTCTTTTGCCTGGAAACCTTTTC-TT-CATCTTATTTT
390 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGC-TC-TATTTT
*
22572 CCTTAAAATGAAAGTTCATCCCTT
453 CCTTAAAATGAAGGTTCATCCCTT
* * *
22596 GACTAAGAGAAGCATCGA-TTCTCCTAACAGTCTCCTTTCTTTTCAAGATT-GGAAGCCAAAACA
1 GAATAAGACAAGCATC-ATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACA
*
22659 CATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTATCTCAAGAAAAGCTTTTCTTCGCGT
65 CATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGT
* * * *
22724 CGTTTTTAACAGAATCAATGTTTGTCTCTTAAATATGCCGAACATTAATACTCAAACTAATCCTC
130 CGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTC
*
22789 ATTCTTTTTAGATTTTGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
195 ATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
22854 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
260 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
22919 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
325 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
22984 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCC
390 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCC
23049 TTAAAATGAAGGTTCATCCCTT
455 TTAAAATGAAGGTTCATCCCTT
23071 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
1 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
23136 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
66 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
23201 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
131 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
23266 TTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTG
196 TTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTG
23331 GTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAGA
261 GTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAGA
23396 CAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCAT
326 CAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCAT
23461 CTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCCT
391 CTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCCT
23526 TAAAATGAAGGTTCATCCCTT
456 TAAAATGAAGGTTCATCCCTT
23547 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
1 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
23612 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
66 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
23677 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
131 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
*
23742 TTAC-ATTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
196 TT-CTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
* * * * * *
23806 GGTTTCGCAACAAAGGCTTTCTCCCCACCAATCGTTGTAAAGTCTAAGTTCGTGCCTCAAATGAG
260 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
* * *
23871 AC-AATATGGATTCTAGTAATGATCTTCATTCTTTTTCTGATAAAGCACTACAAACACATTCTCC
325 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
* * * *
23935 TCTTTAGGACAAAAGACATTGAAGTTTTTCTTTTGCCTGGAAACCTTTTC-TT-CATCTTATTTT
390 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGC-TC-TATTTT
*
23998 CCTTAAAATGAAAGTTCATCCCTT
453 CCTTAAAATGAAGGTTCATCCCTT
* * * *
24022 GACTAAGAGAAGCATCGA-TTCTCCTAACAGTCTCATTTCTTTTCAAGATT-GGAAGCCAAAACA
1 GAATAAGACAAGCATC-ATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACA
24085 CATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGT
65 CATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGT
* * * *
24150 CGTTTTTAACAGAATCAATGTTTGTCTCTTAAATATGCCGAACATTAATACTCAAACTAATCCTC
130 CGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTC
24215 ATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
195 ATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
* *
24280 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCTCAAATGGG
260 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
24345 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
325 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
24410 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCC
390 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCC
24475 TTAAAATGAAGGTTCATCCCTT
455 TTAAAATGAAGGTTCATCCCTT
24497 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
1 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
24562 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
66 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
* *
24627 GTTTTTGATAGAATGAACGTTTGTCTCTTAAATAAGTCGAACATTAATACTCAAACTAATCCTCA
131 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
* *
24692 TTAC-ATTTAGATTCAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
196 TT-CTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
* * * * * ** *
24756 GGTTTCGCAACAAAGGCTTTCTCCCCACCAATCGTTGTAAAGTCTAAGTTCGTTTCTCAAATGAG
260 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
* * *
24821 AC-AATATGGATTCTAGTAATGATCTTCATTCTTTTTCTGATAAAGCACTACAAACACATTCTCC
325 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
* * * *
24885 TCTTTAGGACAAAAGACATTGAAGTTTTTCTTTTGCCTGGAAACCTTTTC-TT-CATCTTATTTT
390 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGC-TC-TATTTT
*
24948 CCTTAAAATGAAAGTTCATCCCTT
453 CCTTAAAATGAAGGTTCATCCCTT
* * * * *
24972 GACTAAGAGAAGCATCGA-TTCTCTTAAGAGTCTCCTTTCTTTTCAAGATT-GGAAGCCAAAACA
1 GAATAAGACAAGCATC-ATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACA
25035 CATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGT
65 CATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGT
* * * *
25100 CGTTTTTAACAGAATCAATGTTTGTCTCTTAAATATGCCGAACATTAATACTCAAACTAATCCTC
130 CGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTC
25165 ATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
195 ATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
*
25230 GGTTTCGCAACAAAGGTTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
260 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
25295 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
325 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
25360 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCC
390 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCC
25425 TTAAAATGAAGGTTCATCCCTT
455 TTAAAATGAAGGTTCATCCCTT
25447 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
1 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
*
25512 ATTCCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
66 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
25577 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
131 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
*
25642 TTAC-ATTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
196 TT-CTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
* * * * *
25706 GGTTTCGCAACAAAGGCTTTCTCCCCACCAATCGTTGTAAAGTCTAAGTTTGTGCCTCAAATGAG
260 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
* *
25771 AC-AATATGGATTCTAGTAATGATCTTCATTCTTTTTCTGATAAAGCACTACAAACACATTCTTC
325 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTC-TC
* * * *
25835 -TCTTTAGGACAAAAGACATTGAAGTTTTTCTTTTGCCTGGAAACCTTTTC-TT-CATCTTATTT
389 ATCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGC-TC-TATTT
*
25897 TCCTTAAAATGAAAGTTCATCCCTT
452 TCCTTAAAATGAAGGTTCATCCCTT
* * *
25922 GACTAAGAGAAGCATCGA-TTCTCCTAACAGTCTCCTTTCTTTTCAAGATT-GGAAGCCAAAACA
1 GAATAAGACAAGCATC-ATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACA
* *
25985 TATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTATCTCAAGAAAAGCTTTTCTTCGCGT
65 CATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGT
* * * *
26050 CGTTTTTAACAGAATCAATGTTTGTCTCTTAAATATGCCGAACATTAATACTCAAACTAATCCTC
130 CGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTC
26115 ATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
195 ATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
26180 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
260 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
26245 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
325 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
26310 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCC
390 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCC
26375 TTAAAATGAAGGTTCATCCCTT
455 TTAAAATGAAGGTTCATCCCTT
26397 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
1 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
26462 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
66 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
26527 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
131 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
26592 TTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTG
196 TTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTG
26657 GTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAGA
261 GTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAGA
26722 CAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCAT
326 CAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCAT
26787 CTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCCT
391 CTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCCT
26852 TAAAATGAAGGTTCATCCCTT
456 TAAAATGAAGGTTCATCCCTT
*
26873 GTATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
1 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
*
26938 ATTGCCTTTGTTAGGATACCCCACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTTCTTCGCGT
66 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGC-TTTTCTTCGCGT
27003 CGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTC
130 CGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTC
*
27068 ATTAC-ATTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTT
195 ATT-CTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTT
* * * * * *
27132 TGGTTTCGCAACAAAGGCTTTCTCCCCACCAATCGTTGTAAAGTCTAAGTTCGTGCCTCAAATGA
259 TGGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGA
* * *
27197 GAC-AATATGGATTCTAGTAATGATCTTCGTTCTTTTTCTGATAAAGCACTACAAACACATTCTC
324 GACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTC
* * * * *
27261 CTCTTTAGGACAAAAGACATTGAAGTTTTTCTTTTGCCTGGAAACCTTTTC-TT-CATCGTATTT
389 ATCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGC-TC-TATTT
*
27324 TCCTTAAAATGAAAGTTCATCCCTT
452 TCCTTAAAATGAAGGTTCATCCCTT
* * * *
27349 GACTAAGAGAAGCATCGA-TTCTCTTAACAGTCTCCTTTCTTTTCAAGATT-GGAAGCCAAAACA
1 GAATAAGACAAGCATC-ATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACA
27412 CATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGT
65 CATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGT
* * * *
27477 CGTTTTTAACAGAATCAATGTTTGTCTCTTAAATATGCCGAACATTAATACTCAAACTAATCCTC
130 CGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTC
27542 ATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
195 ATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
*
27607 GGTTTCGCAACAAAGGTTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
260 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
27672 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
325 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
27737 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCC
390 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCC
27802 TTAAAATGAAGGTTCATCCCTT
455 TTAAAATGAAGGTTCATCCCTT
27824 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
1 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
27889 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
66 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
27954 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
131 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
* * * *
28019 TTTTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACATGGTACTGATGCTTTG
196 TTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTG
* * ** *
28084 GTTTCGCAACAAAGGC-TTTTTCACCACCAATCGTTGTAAAGTCTAAGTTCATGCCTCAAATGAG
261 GTTTCGCAACAAAGGCTTTTTTC-CCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
28148 ACAAATATGGATTCTAA-TAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTC
325 ACAAATATGGATTC-AAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTC
* * * * * * *
28212 CTCTTTAGGACAAAAGACATTGAAGTTTTT-TTTTGCATGGAAATCTTTTCTTCG-TCCTATTTT
389 ATCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCT-CTATTTT
* * *
28275 TCGTAAAATGAAAGTTCATCCCTT
453 CCTTAAAATGAAGGTTCATCCCTT
* * * *
28299 GTATATGACAAGCACCGA-TTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACA
1 GAATAAGACAAGCATC-ATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACA
* * * *
28363 AATT-CGCATTGTTACGGA-ACCCGACATTGAGGCTTTGGTATCTCAAGAAAAGCTTTTCTTCGC
65 CATTGC-CTTTGTTA-GGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGC
* * * *
28426 GTCATTTTTGATAGAATCAACGTTTGCCTCTTAAATAAGCCGAACATTAATATTCAAACTAATCG
128 GTCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCC
* * * ** * * *
28491 TCATTCTTTTTTGATTTAGGCACCATCAACATCGTCTTCTCCCTAGGATACATGGTACTGATGCT
193 TCATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCT
* * * ** *
28556 TTGGTTTCGCAACAAAGGCTTTTTCCCCACCAATCGTTGTAAAGTCTAAGTTCATGCCTCAAATG
258 TTGGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATG
* *
28621 AGACAAATATGGATTCTAGTAATGATCTTCATTCTTTTTCCGATCAAGCACTACAAACACATTCT
323 AGACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCT
* * * * * * ** *
28686 CCTCTTTAGGACAAAAGACATTGAAGTTTTTCTTTTGCGTGGAAATCTTTTCTCCGCCCTATTTT
388 CATCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTT
*
28751 CCTTAAAATGAAAGTTCATCCCTT
453 CCTTAAAATGAAGGTTCATCCCTT
* * * *
28775 GTATAAGACAAGCATTGA-TTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCAAAACA
1 GAATAAGACAAGCA-TCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACA
28839 CA
65 CA
28841 CGTTTGTCTC
Statistics
Matches: 16268, Mismatches: 752, Indels: 308
0.94 0.04 0.02
Matches are distributed among these distances:
473 27 0.00
474 3648 0.22
475 5308 0.33
476 7054 0.43
477 230 0.01
478 1 0.00
ACGTcount: A:0.29, C:0.21, G:0.14, T:0.35
Consensus pattern (476 bp):
GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
TTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTG
GTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAGA
CAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCAT
CTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCCT
TAAAATGAAGGTTCATCCCTT
Found at i:13080 original size:950 final size:952
Alignment explanation
Indices: 11191--28840 Score: 30338
Period size: 950 Copynumber: 18.6 Consensus size: 952
11181 TGCCTAGCCC
11191 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
1 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
11256 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
66 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
11321 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
131 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
11386 TTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTG
196 TTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTG
11451 GTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAGA
261 GTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAGA
11516 CAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCAT
326 CAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCAT
11581 CTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCCT
391 CTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCCT
11646 TAAAATGAAGGTTCATCCCTTGAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTC
456 TAAAATGAAGGTTCATCCCTTGAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTC
11711 AAGATTGGGAAGCCAAAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCA
521 AAGATTGGGAAGCCAAAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCA
11776 AGAAAAGCTTTTCTTCGCGTCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACAT
586 AGAAAAGCTTTTCTTCGCGTCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACAT
*
11841 TAATACTCAAACTAATCCTCATTAC-ATTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAG
651 TAATACTCAAACTAATCCTCATT-CTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAG
* * * * *
11905 GATACACGATATTGATGCTTTGGTTTCGTAACAAAGGCTTTCTCCCCACCAATCGTTGTAAAGTC
715 GATACACGATATTGATGCTTTGGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTC
* * * *
11970 TAAGTTCGTGCCTCAAATGAGAC-AATATGGATTCTAGTAATGATCTTCATTCTTTTTCTGATAA
780 TAAGTTTGTGCCCCAAATGAGACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAA
* * * * * *
12034 AGCACTACAAACACATTCTCCTCTTTAGTACAAAAGACATTGAAGTTTTTCTTTTGCCTGGAAAC
845 AGCACTACAAACACATTCTCATCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAG
*
12099 CTTTTC-TT-CATCTTATTTTCCTTAAAATGAAAGTTCATCCCTT
910 CTTTTCTTTGC-TC-TATTTTCCTTAAAATGAAGGTTCATCCCTT
* * * *
12142 GACTAAGAGAAGCATCGA-TTCTCTTAACAGTCTCCTTTCTTTTCAAGATT-GGAAGCCAAAACA
1 GAATAAGACAAGCATC-ATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACA
12205 CATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGT
65 CATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGT
* * * * *
12270 CGTTTTTAACAGAATCAATGTTTGTCTCTTAAATATGCCGTACATTAATACTCAAACTAATCCTC
130 CGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTC
12335 ATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
195 ATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
12400 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
260 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
12465 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
325 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
12530 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCC
390 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCC
12595 TTAAAATGAAGGTTCATCCCTTGAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTT
455 TTAAAATGAAGGTTCATCCCTTGAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTT
*
12660 CAAGATTGGGAAGCCAAAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTA
520 CAAGATTGGGAAGCCAAAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTC
12725 AAGAAAAGCTTTTCTTCGCGTCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACA
585 AAGAAAAGCTTTTCTTCGCGTCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACA
*
12790 TTAATACTCAAACTAATCCTCATTAC-ATTTAGATTTAGGCACCATAAACATAGTCTTCTCATTA
650 TTAATACTCAAACTAATCCTCATT-CTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTA
* * * *
12854 GGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGCTTTCTCCCCACCAATCGTTGTAAAGT
714 GGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGT
* * ** *
12919 CTAAGTTCGTGCCTCAAATGAGAC-AATATGGATTCTCGTAATGATCTTCATTCTTTTTCTGATA
779 CTAAGTTTGTGCCCCAAATGAGACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATA
* * * *
12983 AAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGACATTGAAGTTTTTCTTTTGCCTGGAAA
844 AAGCACTACAAACACATTCTCATCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAA
* *
13048 CCTTTTC-TT-CATCTTATTTTCCTTAAAATGAAAGTTCATCCCTT
909 GCTTTTCTTTGC-TC-TATTTTCCTTAAAATGAAGGTTCATCCCTT
* * * * *
13092 GACTAAAAGAAGCATCGA-TTCTCCGAACAGTCTCCTTTCTTTTCAAGATT-GGAAGCCAAAACA
1 GAATAAGACAAGCATC-ATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACA
13155 CATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGT
65 CATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGT
* * * * *
13220 CGTTTTTAACAGAATCAATGTTTGTCTCTTAAATATGCTGAACATTAATACTCAAACTAATCCTC
130 CGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTC
13285 ATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
195 ATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
13350 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
260 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
13415 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
325 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
13480 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCC
390 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCC
13545 TTAAAATGAAGGTTCATCCCTTGAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTT
455 TTAAAATGAAGGTTCATCCCTTGAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTT
13610 CAAGATTGGGAAGCCAAAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTC
520 CAAGATTGGGAAGCCAAAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTC
13675 AAGAAAAGCTTTTCTTCGCGTCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACA
585 AAGAAAAGCTTTTCTTCGCGTCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACA
13740 TTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAG
650 TTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAG
13805 GATACACGATATTGATGCTTTGGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTC
715 GATACACGATATTGATGCTTTGGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTC
13870 TAAGTTTGTGCCCCAAATGAGACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAA
780 TAAGTTTGTGCCCCAAATGAGACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAA
13935 AGCACTACAAACACATTCTCATCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAG
845 AGCACTACAAACACATTCTCATCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAG
14000 CTTTTCTTTGCTCTATTTTCCTTAAAATGAAGGTTCATCCCTT
910 CTTTTCTTTGCTCTATTTTCCTTAAAATGAAGGTTCATCCCTT
14043 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
1 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
14108 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
66 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
14173 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
131 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
* *
14238 TTAC-ATTTAAATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
196 TT-CTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
* * * * * *
14302 GGTTTCGCAACAAAGGCTTTCTCCCCACCAATCGTTGTAAAGTCTAAGTTCGTGCCTCAAATGAG
260 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
* * *
14367 AC-AATATGGATTCTAGTAATGATCTTCATTCTTTTTCTGATAAAGCACTACAAACACATTCTCC
325 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
* * * *
14431 TCTTTAGGACAAAAGACATTGAAGTTTTTCTTTTGCCTGGAAACCTTTTC-TT-CATCTTATTTT
390 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGC-TC-TATTTT
* * * * *
14494 CCTTAAAATGAAAGTTCATCCCTTGACTAAGAGAAGCATCGA-TTCTCTTAACAGTCTCCTTTCT
453 CCTTAAAATGAAGGTTCATCCCTTGAATAAGACAAGCATC-ATTTCTCCTAACAATCTCCTTTCT
14558 TTTCAAGATT-GGAAGCCAAAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGT
517 TTTCAAGATTGGGAAGCCAAAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGT
* * * *
14622 CTCAAGAAAAGCTTTTCTTCGCGTCGTTTTTAACAGAATCAATGTTTGTCTCTTAAATATGCCGA
582 CTCAAGAAAAGCTTTTCTTCGCGTCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGA
14687 ACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCAT
647 ACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCAT
* *
14752 TAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAAGTTTTTTTCCCACCAATCATTCTAAA
712 TAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAA
14817 GTCTAAGTTTGTGCCCCAAATGAGACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGA
777 GTCTAAGTTTGTGCCCCAAATGAGACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGA
14882 TAAAGCACTACAAACACATTCTCATCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGA
842 TAAAGCACTACAAACACATTCTCATCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGA
14947 AAGCTTTTCTTTGCTCTATTTTCCTTAAAATGAAGGTTCATCCCTT
907 AAGCTTTTCTTTGCTCTATTTTCCTTAAAATGAAGGTTCATCCCTT
14993 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
1 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
15058 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
66 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
15123 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
131 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
*
15188 TTAC-ATTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
196 TT-CTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
* * * * * *
15252 GGTTTCGCAACAAAGGCTTTCTCCCCACCAATCGTTGTAAAGTCTAAGTTCGTGCCTCAAATGAG
260 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
* * *
15317 AC-AATATGGATTCTAGTAATGATCTTCATTCTTTTTCTGATAAAGCACTACAAACACATTCTCC
325 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
* * * * * *
15381 TCTTTAGGACAAAAGACATTGAAGTTTTTCTTTTGCCTGGAAACCTTTTC-TT-CATATTCTTTT
390 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGC-T-CTATTTT
* * * * *
15444 CCTTAAAATGAAAGTTCATCCCTTGACTAAGAGAATCATCGA-TTCTCCTAACAGTCTCCTTTCT
453 CCTTAAAATGAAGGTTCATCCCTTGAATAAGACAAGCATC-ATTTCTCCTAACAATCTCCTTTCT
*
15508 TTTCAAGATT-AGAAGCCAAAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGT
517 TTTCAAGATTGGGAAGCCAAAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGT
* * * *
15572 CTCAAGAAAAGCTTTTCTTCGCGTCGTTTTTAACAGAATCAATGTTTGTCTCTTAAATATGCCGA
582 CTCAAGAAAAGCTTTTCTTCGCGTCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGA
15637 ACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCAT
647 ACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCAT
15702 TAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAA
712 TAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAA
15767 GTCTAAGTTTGTGCCCCAAATGAGACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGA
777 GTCTAAGTTTGTGCCCCAAATGAGACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGA
*
15832 TAAAGCACTACAAACACATTCTCATCTGTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGA
842 TAAAGCACTACAAACACATTCTCATCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGA
15897 AAGCTTTTCTTTGCTCTATTTTCCTTAAAATGAAGGTTCATCCCTT
907 AAGCTTTTCTTTGCTCTATTTTCCTTAAAATGAAGGTTCATCCCTT
15943 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
1 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
16008 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
66 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
16073 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
131 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
*
16138 TTAC-ATTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
196 TT-CTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
* * * * * *
16202 GGTTTCGCAACAAAGGCTTTCTCCCCACCAATCGTTGTAAAGTCTAAGTTCGTGCCTCAAATGAG
260 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
* * *
16267 AC-AATATGGATTCTAGTAATGATCTTCATTCTTTTTCTGATAAAGCACTACAAACACATTCTCC
325 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
* * * *
16331 TCTTTAGGACAAAAGACATTGAAGTTTTTCTTTTGCCTGGAAACCTTTTC-TT-CATCTTATTTT
390 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGC-TC-TATTTT
* * * *
16394 CCTTAAAATGAAAGTTCATCCCTTGACTAAGAGAAGCATCGA-TTCTCCTAACAGTCTCCTTTCT
453 CCTTAAAATGAAGGTTCATCCCTTGAATAAGACAAGCATC-ATTTCTCCTAACAATCTCCTTTCT
16458 TTTCAAGATT-GGAAGCCAAAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGT
517 TTTCAAGATTGGGAAGCCAAAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGT
* * * *
16522 CTCAAGAAAAGCTTTTCTTCGCGTCGTTTTTAACAGAATCAATGTTTGTCTCTTAAATATGCCGA
582 CTCAAGAAAAGCTTTTCTTCGCGTCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGA
16587 ACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCAT
647 ACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCAT
16652 TAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAA
712 TAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAA
16717 GTCTAAGTTTGTGCCCCAAATGAGACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGA
777 GTCTAAGTTTGTGCCCCAAATGAGACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGA
* *
16782 TAAAGCACTACAAACACATTCTCATCTGTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCCAGA
842 TAAAGCACTACAAACACATTCTCATCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGA
16847 AAGCTTTTCTTTGCTCTATTTTCCTTAAAATGAAGGTTCATCCCTT
907 AAGCTTTTCTTTGCTCTATTTTCCTTAAAATGAAGGTTCATCCCTT
16893 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
1 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
16958 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
66 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
*
17023 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTTA
131 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
17088 TTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTG
196 TTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTG
17153 GTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAGA
261 GTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAGA
17218 CAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCAT
326 CAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCAT
17283 CTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCCT
391 CTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCCT
17348 TAAAATGAAGGTTCATCCCTTGAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTC
456 TAAAATGAAGGTTCATCCCTTGAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTC
*
17413 AAGATTGGGAAGCCAAAACACATTGCCTTTGTTAGGATACCCCACATTGATGCTTTGGTGTCTCA
521 AAGATTGGGAAGCCAAAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCA
17478 AGAAAAGCTTTTCTTCGCGTCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACAT
586 AGAAAAGCTTTTCTTCGCGTCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACAT
*
17543 TAATACTCAAACTAATCCTCATTAC-ATTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAG
651 TAATACTCAAACTAATCCTCATT-CTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAG
* * * *
17607 GATACACGATATTGATGCTTTGGTTTCGCAACAAAGGCTTTCTCCCCACCAATCGTTGTAAAGTC
715 GATACACGATATTGATGCTTTGGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTC
* * *
17672 TAAGTTCGTGCCTCAAATGAGAC-AATATGGATTCTAGTAATGATCTTCATTCTTTTTCCGATAA
780 TAAGTTTGTGCCCCAAATGAGACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAA
17736 AGCACTACAAACACATTCTCATCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAG
845 AGCACTACAAACACATTCTCATCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAG
**
17801 CTTTTC-TT-CATCTTATTTTCCTTAAAATGAAATTTCATCCCTT
910 CTTTTCTTTGC-TC-TATTTTCCTTAAAATGAAGGTTCATCCCTT
* * * *
17844 GACTAAAAGAAGCATCGA-TTCTCCTAACAGTCTCCTTTCTTTTCAAGATT-GGAAGCCAAAACA
1 GAATAAGACAAGCATC-ATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACA
17907 CATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGT
65 CATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGT
* * * *
17972 CGTTTTTAACAGAATCAATGTTTGTCTCTTAAATATGCCGAACATTAATACTCAAACTAATCCTC
130 CGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTC
18037 ATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
195 ATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
18102 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
260 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
18167 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
325 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
*
18232 TCTTTAGGACAAAAGACTTTGCAGCTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCC
390 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCC
18297 TTAAAATGAAGGTTCATCCCTTGAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTT
455 TTAAAATGAAGGTTCATCCCTTGAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTT
18362 CAAGATTGGGAAGCCAAAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTC
520 CAAGATTGGGAAGCCAAAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTC
18427 AAGAAAAGCTTTTCTTCGCGTCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACA
585 AAGAAAAGCTTTTCTTCGCGTCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACA
18492 TTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAG
650 TTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAG
18557 GATACACGATATTGATGCTTTGGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTC
715 GATACACGATATTGATGCTTTGGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTC
18622 TAAGTTTGTGCCCCAAATGAGACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAA
780 TAAGTTTGTGCCCCAAATGAGACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAA
18687 AGCACTACAAACACATTCTCATCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAG
845 AGCACTACAAACACATTCTCATCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAG
18752 CTTTTCTTTGCTCTATTTTCCTTAAAATGAAGGTTCATCCCTT
910 CTTTTCTTTGCTCTATTTTCCTTAAAATGAAGGTTCATCCCTT
18795 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
1 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
18860 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
66 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
18925 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
131 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
*
18990 TTAC-ATTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
196 TT-CTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
* * * * * *
19054 GGTTTCGCAACAAAGGCTTTCTCCCCACCAATCGTTGTAAAGTCTAAGTTCGTGCCTCAAATGAG
260 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
* * *
19119 AC-AATATGGATTCTAGTAATGATCTTCATTCTTTTTCTGATAAAGCACTACAAACACATTCTCC
325 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
* * * *
19183 TCTTTAGGACAAAAGACATTGAAGTTTTTCTTTTGCCTGGAAACCTTTTC-TT-CATCTTATTTT
390 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGC-TC-TATTTT
* * * *
19246 CCTTAAAATGAAAGTTCATCCCTTGACTAAGAGAAGCATCGA-TTCTCCTAACAGTCTCCTTTCT
453 CCTTAAAATGAAGGTTCATCCCTTGAATAAGACAAGCATC-ATTTCTCCTAACAATCTCCTTTCT
19310 TTTCAAGATT-GGAAGCCAAAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGT
517 TTTCAAGATTGGGAAGCCAAAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGT
* * * *
19374 CTCAAGAAAAGCTTTTCTTCGCGTCGTTTTTAACAGAATCAATGTTTGTCTCTTAAATATGCCGA
582 CTCAAGAAAAGCTTTTCTTCGCGTCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGA
19439 ACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCAT
647 ACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCAT
*
19504 TAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGTTTTTTTCCCACCAATCATTCTAAA
712 TAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAA
19569 GTCTAAGTTTGTGCCCCAAATGAGACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGA
777 GTCTAAGTTTGTGCCCCAAATGAGACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGA
19634 TAAAGCACTACAAACACATTCTCATCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGA
842 TAAAGCACTACAAACACATTCTCATCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGA
19699 AAGCTTTTCTTTGCTCTATTTTCCTTAAAATGAAGGTTCATCCCTT
907 AAGCTTTTCTTTGCTCTATTTTCCTTAAAATGAAGGTTCATCCCTT
19745 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
1 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
19810 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
66 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
19875 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
131 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
19940 TTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTG
196 TTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTG
20005 GTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAGA
261 GTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAGA
20070 CAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCAT
326 CAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCAT
20135 CTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCCT
391 CTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCCT
20200 TAAAATGAAGGTTCATCCCTTGAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTC
456 TAAAATGAAGGTTCATCCCTTGAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTC
20265 AAGATTGGGAAGCCAAAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCA
521 AAGATTGGGAAGCCAAAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCA
20330 AGAAAAGCTTTTCTTCGCGTCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACAT
586 AGAAAAGCTTTTCTTCGCGTCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACAT
*
20395 TAATACTCAAACTAATCCTCATTAC-ATTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAG
651 TAATACTCAAACTAATCCTCATT-CTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAG
* * * *
20459 GATACACGATATTGATGCTTTGGTTTCGCAACAAAGGCTTTCTCCCCACCAATCGTTGTAAAGTC
715 GATACACGATATTGATGCTTTGGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTC
* ** * * *
20524 TAAGTTCGTTTCTCAAATGAGAC-AATATGGATTCTAGTAATGATCTTCATTCTTTTTCTGATAA
780 TAAGTTTGTGCCCCAAATGAGACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAA
* * * * *
20588 AGCACTACAAACACATTCTCCTCTTTAGGACAAAAGACATTGAAGTTTTTCTTTTGCCTGGAAAC
845 AGCACTACAAACACATTCTCATCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAG
*
20653 CTTTTC-TT-CATCTTATTTTCCTTAAAATGAAAGTTCATCCCTT
910 CTTTTCTTTGC-TC-TATTTTCCTTAAAATGAAGGTTCATCCCTT
* * * *
20696 GACTAAGAGAAGCATCGA-TTCTCTTAACAGTCTCCTTTCTTTTCAAGATT-GGAAGCCAAAACA
1 GAATAAGACAAGCATC-ATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACA
20759 CATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGT
65 CATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGT
* * * *
20824 CGTTTTTAACAGAATCAATGTTTGTCTCTTAAATATGCCGAACATTAATACTCAAACTAATCCTC
130 CGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTC
20889 ATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
195 ATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
*
20954 GGTTTCGCAACAAAGGTTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
260 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
21019 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
325 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
21084 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCC
390 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCC
21149 TTAAAATGAAGGTTCATCCCTTGAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTT
455 TTAAAATGAAGGTTCATCCCTTGAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTT
21214 CAAGATTGGGAAGCCAAAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTC
520 CAAGATTGGGAAGCCAAAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTC
21279 AAGAAAAGCTTTTCTTCGCGTCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACA
585 AAGAAAAGCTTTTCTTCGCGTCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACA
*
21344 TTAATACTCAAACTAATCCTCATTAC-ATTTAGATTTAGGCACCATAAACATAGTCTTCTCATTA
650 TTAATACTCAAACTAATCCTCATT-CTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTA
* * * *
21408 GGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGCTTTCTCCCCACCAATCGTTGTAAAGT
714 GGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGT
* * *
21473 CTAAGTTTGTGCCTCAAATGAGAC-AATATGGATTCTAGTAATGATCTTCATTCTTTTTCTGATA
779 CTAAGTTTGTGCCCCAAATGAGACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATA
* * * *
21537 AAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGACATTGAAGTTTTTCTTTTGCCTGGAAA
844 AAGCACTACAAACACATTCTCATCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAA
* *
21602 CCTTTTC-TT-CATCTTATTTTCCTTAAAATGAAAGTTCATCCCTT
909 GCTTTTCTTTGC-TC-TATTTTCCTTAAAATGAAGGTTCATCCCTT
* * * *
21646 GACTAAGAGAAGCATCGA-TTCTCTTAACAGTCTCCTTTCTTTTCAAGATT-GGAAGCCAAAACA
1 GAATAAGACAAGCATC-ATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACA
21709 CATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGT
65 CATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGT
* * * *
21774 CGTTTTTAACAGAATCAATGTTTGTCTCTTAAATATGCCGAACATTAATACTCAAACTAATCCTC
130 CGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTC
21839 ATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
195 ATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
*
21904 GGTTTCGCAACAAAGGTTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
260 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
21969 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
325 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
22034 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCC
390 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCC
22099 TTAAAATGAAGGTTCATCCCTTGAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTT
455 TTAAAATGAAGGTTCATCCCTTGAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTT
22164 CAAGATTGGGAAGCCAAAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTC
520 CAAGATTGGGAAGCCAAAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTC
22229 AAGAAAAGCTTTTCTTCGCGTCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACA
585 AAGAAAAGCTTTTCTTCGCGTCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACA
* *
22294 TTAATACTCAAACTAATCCTCATTAC-ATTTAGATTTAGGCATCATAAACATAGTCTTCTCATTA
650 TTAATACTCAAACTAATCCTCATT-CTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTA
* * * *
22358 GGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGCTTTCTCCCCACCAATCGTTGTAAAGT
714 GGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGT
* * * *
22423 CTAAGTTCGTGCCTCAAATGAGAC-AATATGGATTCTAGTAATGATCTTCATTCTTTTTCTGATA
779 CTAAGTTTGTGCCCCAAATGAGACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATA
* * * *
22487 AAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGACATTGAAGTTTTTCTTTTGCCTGGAAA
844 AAGCACTACAAACACATTCTCATCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAA
* *
22552 CCTTTTC-TT-CATCTTATTTTCCTTAAAATGAAAGTTCATCCCTT
909 GCTTTTCTTTGC-TC-TATTTTCCTTAAAATGAAGGTTCATCCCTT
* * *
22596 GACTAAGAGAAGCATCGA-TTCTCCTAACAGTCTCCTTTCTTTTCAAGATT-GGAAGCCAAAACA
1 GAATAAGACAAGCATC-ATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACA
*
22659 CATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTATCTCAAGAAAAGCTTTTCTTCGCGT
65 CATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGT
* * * *
22724 CGTTTTTAACAGAATCAATGTTTGTCTCTTAAATATGCCGAACATTAATACTCAAACTAATCCTC
130 CGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTC
*
22789 ATTCTTTTTAGATTTTGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
195 ATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
22854 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
260 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
22919 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
325 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
22984 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCC
390 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCC
23049 TTAAAATGAAGGTTCATCCCTTGAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTT
455 TTAAAATGAAGGTTCATCCCTTGAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTT
23114 CAAGATTGGGAAGCCAAAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTC
520 CAAGATTGGGAAGCCAAAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTC
23179 AAGAAAAGCTTTTCTTCGCGTCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACA
585 AAGAAAAGCTTTTCTTCGCGTCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACA
23244 TTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAG
650 TTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAG
23309 GATACACGATATTGATGCTTTGGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTC
715 GATACACGATATTGATGCTTTGGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTC
23374 TAAGTTTGTGCCCCAAATGAGACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAA
780 TAAGTTTGTGCCCCAAATGAGACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAA
23439 AGCACTACAAACACATTCTCATCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAG
845 AGCACTACAAACACATTCTCATCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAG
23504 CTTTTCTTTGCTCTATTTTCCTTAAAATGAAGGTTCATCCCTT
910 CTTTTCTTTGCTCTATTTTCCTTAAAATGAAGGTTCATCCCTT
23547 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
1 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
23612 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
66 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
23677 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
131 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
*
23742 TTAC-ATTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
196 TT-CTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
* * * * * *
23806 GGTTTCGCAACAAAGGCTTTCTCCCCACCAATCGTTGTAAAGTCTAAGTTCGTGCCTCAAATGAG
260 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
* * *
23871 AC-AATATGGATTCTAGTAATGATCTTCATTCTTTTTCTGATAAAGCACTACAAACACATTCTCC
325 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
* * * *
23935 TCTTTAGGACAAAAGACATTGAAGTTTTTCTTTTGCCTGGAAACCTTTTC-TT-CATCTTATTTT
390 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGC-TC-TATTTT
* * * * *
23998 CCTTAAAATGAAAGTTCATCCCTTGACTAAGAGAAGCATCGA-TTCTCCTAACAGTCTCATTTCT
453 CCTTAAAATGAAGGTTCATCCCTTGAATAAGACAAGCATC-ATTTCTCCTAACAATCTCCTTTCT
24062 TTTCAAGATT-GGAAGCCAAAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGT
517 TTTCAAGATTGGGAAGCCAAAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGT
* * * *
24126 CTCAAGAAAAGCTTTTCTTCGCGTCGTTTTTAACAGAATCAATGTTTGTCTCTTAAATATGCCGA
582 CTCAAGAAAAGCTTTTCTTCGCGTCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGA
24191 ACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCAT
647 ACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCAT
24256 TAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAA
712 TAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAA
* *
24321 GTCTAAGTTTGTGCCTCAAATGGGACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGA
777 GTCTAAGTTTGTGCCCCAAATGAGACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGA
24386 TAAAGCACTACAAACACATTCTCATCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGA
842 TAAAGCACTACAAACACATTCTCATCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGA
24451 AAGCTTTTCTTTGCTCTATTTTCCTTAAAATGAAGGTTCATCCCTT
907 AAGCTTTTCTTTGCTCTATTTTCCTTAAAATGAAGGTTCATCCCTT
24497 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
1 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
24562 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
66 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
* *
24627 GTTTTTGATAGAATGAACGTTTGTCTCTTAAATAAGTCGAACATTAATACTCAAACTAATCCTCA
131 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
* *
24692 TTAC-ATTTAGATTCAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
196 TT-CTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
* * * * * ** *
24756 GGTTTCGCAACAAAGGCTTTCTCCCCACCAATCGTTGTAAAGTCTAAGTTCGTTTCTCAAATGAG
260 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
* * *
24821 AC-AATATGGATTCTAGTAATGATCTTCATTCTTTTTCTGATAAAGCACTACAAACACATTCTCC
325 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
* * * *
24885 TCTTTAGGACAAAAGACATTGAAGTTTTTCTTTTGCCTGGAAACCTTTTC-TT-CATCTTATTTT
390 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGC-TC-TATTTT
* * * * * *
24948 CCTTAAAATGAAAGTTCATCCCTTGACTAAGAGAAGCATCGA-TTCTCTTAAGAGTCTCCTTTCT
453 CCTTAAAATGAAGGTTCATCCCTTGAATAAGACAAGCATC-ATTTCTCCTAACAATCTCCTTTCT
25012 TTTCAAGATT-GGAAGCCAAAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGT
517 TTTCAAGATTGGGAAGCCAAAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGT
* * * *
25076 CTCAAGAAAAGCTTTTCTTCGCGTCGTTTTTAACAGAATCAATGTTTGTCTCTTAAATATGCCGA
582 CTCAAGAAAAGCTTTTCTTCGCGTCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGA
25141 ACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCAT
647 ACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCAT
*
25206 TAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGTTTTTTTCCCACCAATCATTCTAAA
712 TAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAA
25271 GTCTAAGTTTGTGCCCCAAATGAGACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGA
777 GTCTAAGTTTGTGCCCCAAATGAGACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGA
25336 TAAAGCACTACAAACACATTCTCATCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGA
842 TAAAGCACTACAAACACATTCTCATCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGA
25401 AAGCTTTTCTTTGCTCTATTTTCCTTAAAATGAAGGTTCATCCCTT
907 AAGCTTTTCTTTGCTCTATTTTCCTTAAAATGAAGGTTCATCCCTT
25447 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
1 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
*
25512 ATTCCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
66 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
25577 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
131 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
*
25642 TTAC-ATTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
196 TT-CTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
* * * * *
25706 GGTTTCGCAACAAAGGCTTTCTCCCCACCAATCGTTGTAAAGTCTAAGTTTGTGCCTCAAATGAG
260 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
* *
25771 AC-AATATGGATTCTAGTAATGATCTTCATTCTTTTTCTGATAAAGCACTACAAACACATTCTTC
325 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTC-TC
* * * *
25835 -TCTTTAGGACAAAAGACATTGAAGTTTTTCTTTTGCCTGGAAACCTTTTC-TT-CATCTTATTT
389 ATCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGC-TC-TATTT
* * * *
25897 TCCTTAAAATGAAAGTTCATCCCTTGACTAAGAGAAGCATCGA-TTCTCCTAACAGTCTCCTTTC
452 TCCTTAAAATGAAGGTTCATCCCTTGAATAAGACAAGCATC-ATTTCTCCTAACAATCTCCTTTC
* *
25961 TTTTCAAGATT-GGAAGCCAAAACATATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTA
516 TTTTCAAGATTGGGAAGCCAAAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTG
* * * *
26025 TCTCAAGAAAAGCTTTTCTTCGCGTCGTTTTTAACAGAATCAATGTTTGTCTCTTAAATATGCCG
581 TCTCAAGAAAAGCTTTTCTTCGCGTCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCG
26090 AACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCA
646 AACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCA
26155 TTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAA
711 TTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAA
26220 AGTCTAAGTTTGTGCCCCAAATGAGACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCG
776 AGTCTAAGTTTGTGCCCCAAATGAGACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCG
26285 ATAAAGCACTACAAACACATTCTCATCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAG
841 ATAAAGCACTACAAACACATTCTCATCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAG
26350 AAAGCTTTTCTTTGCTCTATTTTCCTTAAAATGAAGGTTCATCCCTT
906 AAAGCTTTTCTTTGCTCTATTTTCCTTAAAATGAAGGTTCATCCCTT
26397 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
1 GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
26462 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
66 ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
26527 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
131 GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
26592 TTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTG
196 TTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTG
26657 GTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAGA
261 GTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAGA
26722 CAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCAT
326 CAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCAT
26787 CTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCCT
391 CTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCCT
*
26852 TAAAATGAAGGTTCATCCCTTGTATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTC
456 TAAAATGAAGGTTCATCCCTTGAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTC
*
26917 AAGATTGGGAAGCCAAAACACATTGCCTTTGTTAGGATACCCCACATTGATGCTTTGGTGTCTCA
521 AAGATTGGGAAGCCAAAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCA
26982 AGAAAAGCTTTTTCTTCGCGTCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACA
586 AGAAAAGC-TTTTCTTCGCGTCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACA
*
27047 TTAATACTCAAACTAATCCTCATTAC-ATTTAGATTTAGGCACCATAAACATAGTCTTCTCATTA
650 TTAATACTCAAACTAATCCTCATT-CTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTA
* * * *
27111 GGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGCTTTCTCCCCACCAATCGTTGTAAAGT
714 GGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGT
* * * * *
27176 CTAAGTTCGTGCCTCAAATGAGAC-AATATGGATTCTAGTAATGATCTTCGTTCTTTTTCTGATA
779 CTAAGTTTGTGCCCCAAATGAGACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATA
* * * *
27240 AAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGACATTGAAGTTTTTCTTTTGCCTGGAAA
844 AAGCACTACAAACACATTCTCATCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAA
* *
27305 CCTTTTC-TT-CATCGTATTTTCCTTAAAATGAAAGTTCATCCCTT
909 GCTTTTCTTTGC-TC-TATTTTCCTTAAAATGAAGGTTCATCCCTT
* * * *
27349 GACTAAGAGAAGCATCGA-TTCTCTTAACAGTCTCCTTTCTTTTCAAGATT-GGAAGCCAAAACA
1 GAATAAGACAAGCATC-ATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACA
27412 CATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGT
65 CATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGT
* * * *
27477 CGTTTTTAACAGAATCAATGTTTGTCTCTTAAATATGCCGAACATTAATACTCAAACTAATCCTC
130 CGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTC
27542 ATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
195 ATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
*
27607 GGTTTCGCAACAAAGGTTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
260 GGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAG
27672 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
325 ACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCA
27737 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCC
390 TCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCC
27802 TTAAAATGAAGGTTCATCCCTTGAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTT
455 TTAAAATGAAGGTTCATCCCTTGAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTT
27867 CAAGATTGGGAAGCCAAAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTC
520 CAAGATTGGGAAGCCAAAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTC
27932 AAGAAAAGCTTTTCTTCGCGTCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACA
585 AAGAAAAGCTTTTCTTCGCGTCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACA
*
27997 TTAATACTCAAACTAATCCTCATTTTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAG
650 TTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAG
* * * * *
28062 GATACATGGTACTGATGCTTTGGTTTCGCAACAAAGGC-TTTTTCACCACCAATCGTTGTAAAGT
715 GATACACGATATTGATGCTTTGGTTTCGCAACAAAGGCTTTTTTC-CCACCAATCATTCTAAAGT
** *
28126 CTAAGTTCATGCCTCAAATGAGACAAATATGGATTCTAA-TAATGATCTTCATTCTTTTTCCGAT
779 CTAAGTTTGTGCCCCAAATGAGACAAATATGGATTC-AAGTAATGATCTTCATTCTTTTTCCGAT
* * * * *
28190 AAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGACATTGAAGTTTTT-TTTTGCATGGAA
843 AAAGCACTACAAACACATTCTCATCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAA
* * * * *
28254 ATCTTTTCTTCG-TCCTATTTTTCGTAAAATGAAAGTTCATCCCTT
908 AGCTTTTCTTTGCT-CTATTTTCCTTAAAATGAAGGTTCATCCCTT
* * * *
28299 GTATATGACAAGCACCGA-TTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACA
1 GAATAAGACAAGCATC-ATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACA
* * * *
28363 AATT-CGCATTGTTACGGA-ACCCGACATTGAGGCTTTGGTATCTCAAGAAAAGCTTTTCTTCGC
65 CATTGC-CTTTGTTA-GGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGC
* * * *
28426 GTCATTTTTGATAGAATCAACGTTTGCCTCTTAAATAAGCCGAACATTAATATTCAAACTAATCG
128 GTCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCC
* * * ** * * *
28491 TCATTCTTTTTTGATTTAGGCACCATCAACATCGTCTTCTCCCTAGGATACATGGTACTGATGCT
193 TCATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCT
* * * ** *
28556 TTGGTTTCGCAACAAAGGCTTTTTCCCCACCAATCGTTGTAAAGTCTAAGTTCATGCCTCAAATG
258 TTGGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATG
* *
28621 AGACAAATATGGATTCTAGTAATGATCTTCATTCTTTTTCCGATCAAGCACTACAAACACATTCT
323 AGACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCT
* * * * * * ** *
28686 CCTCTTTAGGACAAAAGACATTGAAGTTTTTCTTTTGCGTGGAAATCTTTTCTCCGCCCTATTTT
388 CATCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTT
* * * *
28751 CCTTAAAATGAAAGTTCATCCCTTGTATAAGACAAGCATTGA-TTCTCCTAACAGTCTCCTTTCT
453 CCTTAAAATGAAGGTTCATCCCTTGAATAAGACAAGCA-TCATTTCTCCTAACAATCTCCTTTCT
*
28815 TTTCAAGATTGAGAAGCCAAAACACA
517 TTTCAAGATTGGGAAGCCAAAACACA
28841 CGTTTGTCTC
Statistics
Matches: 16200, Mismatches: 422, Indels: 154
0.97 0.03 0.01
Matches are distributed among these distances:
949 15 0.00
950 11321 0.70
951 3077 0.19
952 1578 0.10
953 208 0.01
954 1 0.00
ACGTcount: A:0.29, C:0.21, G:0.14, T:0.35
Consensus pattern (952 bp):
GAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAAAACAC
ATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGCGTC
GTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCA
TTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTG
GTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAGA
CAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCAT
CTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCCT
TAAAATGAAGGTTCATCCCTTGAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTC
AAGATTGGGAAGCCAAAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCA
AGAAAAGCTTTTCTTCGCGTCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACAT
TAATACTCAAACTAATCCTCATTCTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGG
ATACACGATATTGATGCTTTGGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTCTAAAGTCT
AAGTTTGTGCCCCAAATGAGACAAATATGGATTCAAGTAATGATCTTCATTCTTTTTCCGATAAA
GCACTACAAACACATTCTCATCTTTAGGACAAAAGACTTTGCAGTTTTTCTTTTGCCTAGAAAGC
TTTTCTTTGCTCTATTTTCCTTAAAATGAAGGTTCATCCCTT
Found at i:29067 original size:395 final size:395
Alignment explanation
Indices: 28445--29235 Score: 1251
Period size: 395 Copynumber: 2.0 Consensus size: 395
28435 GATAGAATCA
* * * *
28445 ACGTTTGCCTCTTAAATAAGCCGAACATTAATATTCAAACTAATCGTCATTCTTTTTTGATTTAG
1 ACGTTTGCCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCCTTTTAGATTTAG
* * * * *
28510 GCACCATCAACATCGTCTTCTCCCTAGGATACATGGTACTGATGCTTTGGTTTCGCAACAAAGGC
66 GCACCATAAACATAGTCTTCTCACTAGGATACACGATACTGATGCTTTGGTTTCGCAACAAAGGC
* * * *
28575 TTTTTCCCCACCAATCGTTGTAAAGTCTAAGTTCATGCCTCAAATGAGACAAATATGGATTCTAG
131 TTTTTCCCCACCAATCATTCTAAAGTCTAAGTTCATGCCCCAAATGAGACAAATATGGATTCAAG
* *
28640 TAATGATCTTCATTCTTTTTCCGATCAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
196 TAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCATCTTTAGGACAAAAGAC
* * *
28705 ATTGAAGTTTTTCTTTTGCGTGGAAATCTTTTCTCCGCCCTATTTTCCTTAAAATGAAAGTTCAT
261 ATTGAAGTTTTTCTTTTGCCTAGAAAGCTTTTCTCCGCCCTATTTTCCTTAAAATGAAAGTTCAT
* * *
28770 CCCTTGTATAAGACAAGCATTGA-TTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCA
326 CCCTTGAATAAGACAAGCA-TCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGAGAAGCCA
28834 AAACAC
390 AAACAC
*
28840 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCCTTTTAGATTTAG
1 ACGTTTGCCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCCTTTTAGATTTAG
* * *
28905 GCACCATAAATATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
66 GCACCATAAACATAGTCTTCTCACTAGGATACACGATACTGATGCTTTGGTTTCGCAACAAAGGC
* **
28970 TTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAGACAAATATGGATTCAAG
131 TTTTTCCCCACCAATCATTCTAAAGTCTAAGTTCATGCCCCAAATGAGACAAATATGGATTCAAG
29035 TAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCATCTTTAGGACAAAAGAC
196 TAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCATCTTTAGGACAAAAGAC
* * ** * *
29100 TTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCCTTAAAATGAAGGTTCAT
261 ATTGAAGTTTTTCTTTTGCCTAGAAAGCTTTTCTCCGCCCTATTTTCCTTAAAATGAAAGTTCAT
*
29165 CCCTTGAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCAA
326 CCCTTGAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGAGAAGCCAA
29230 AACAC
391 AACAC
29235 A
1 A
29236 TTGCCTTTGT
Statistics
Matches: 360, Mismatches: 35, Indels: 2
0.91 0.09 0.01
Matches are distributed among these distances:
394 2 0.01
395 358 0.99
ACGTcount: A:0.30, C:0.22, G:0.13, T:0.35
Consensus pattern (395 bp):
ACGTTTGCCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCCTTTTAGATTTAG
GCACCATAAACATAGTCTTCTCACTAGGATACACGATACTGATGCTTTGGTTTCGCAACAAAGGC
TTTTTCCCCACCAATCATTCTAAAGTCTAAGTTCATGCCCCAAATGAGACAAATATGGATTCAAG
TAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCATCTTTAGGACAAAAGAC
ATTGAAGTTTTTCTTTTGCCTAGAAAGCTTTTCTCCGCCCTATTTTCCTTAAAATGAAAGTTCAT
CCCTTGAATAAGACAAGCATCATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGAGAAGCCAA
AACAC
Found at i:30264 original size:475 final size:476
Alignment explanation
Indices: 28840--33984 Score: 8241
Period size: 475 Copynumber: 10.8 Consensus size: 476
28830 GCCAAAACAC
*
28840 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCCTTTTAGATTTAG
1 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
*
28905 GCACCATAAATATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
66 GCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
* * * * * *
28970 TTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAGACAAATATGGATTCAAG
131 TTTTTCCCCACCAATCATTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATACGGATTCTAG
*
29035 TAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCATCTTTAGGACAAAAGAC
196 TAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
* * * * * * *
29100 TTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCCTTAAAATGAAGGTTCAT
261 ATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCTTCGCCCTATTTTCCTTAAAATGAAAGTTCAT
* *
29165 CCCTTGAATAAGACAAGCATC-ATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCA
326 CCCTTGAATAAGACAAGCATCGA-TTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCA
29229 AAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTT
390 AAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTT
29294 CGCGTCGTTTTTGATAGAATCA
455 CGCGTCGTTTTTGATAGAATCA
* *
29316 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTAC-ATTTAAATTTA
1 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATT-CTTTTTAGATTTA
29380 GGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGG
65 GGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGG
* * * *
29445 CTTTCTCCCCACCAATCGTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGAC-AATATGGATTTTA
130 CTTTTTCCCCACCAATCATTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATACGGATTCTA
* *
29509 GTAATGATCTTCGTTCTTTTTCTGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGA
195 GTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGA
* ** *
29574 CATTGAAGTTTTTCTTTTGCCTGGAAACCTTTTCTTCATCGTATTTTCCTTAAAATGAAAGTTCA
260 CATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCTTCGCCCTATTTTCCTTAAAATGAAAGTTCA
* * * *
29639 TCCCTTGACTAAGAGAAGCATCGATTCTCTTAACAGTCTCCTTTCTTTTCAAGACTG-GAAGCCA
325 TCCCTTGAATAAGACAAGCATCGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCA
29703 AAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTT
390 AAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTT
* *
29768 CGCGTCGTTTTTAACAGAATCA
455 CGCGTCGTTTTTGATAGAATCA
* *
29790 ATGTTTGTCTCTTAAATATGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
1 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
* * *
29855 GAACCAAAAACATAGTCTTCTCATTAGGATACACAATATTGATGCTTTGGTTTCGCAACAAAGGC
66 GCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
* * * *
29920 TTTTTTCCCACCAATCATTGTAAAGTCTAAGTTTGTGCCCCAAATGAGACAAATACAGATTCTAG
131 TTTTTCCCCACCAATCATTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATACGGATTCTAG
*
29985 TAATGAACTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
196 TAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
* *
30050 TTTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCCTCGCCCTATTTTCCTTAAAATGAAAGTTCAT
261 ATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCTTCGCCCTATTTTCCTTAAAATGAAAGTTCAT
* *
30115 CCCTTGAATTAGACAAGCATCCATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCAA
326 CCCTTGAATAAGACAAGCATCGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCAA
* * *
30180 AACACATTGCTTTTGTTAGGATA-CCGACATAGATGCTTTGGTGTCTCAAGAAAAGCTTTTCCTC
391 AACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTC
* *
30244 GCATCCTTTTTGATAGAATCA
456 GCGTCGTTTTTGATAGAATCA
* * * * *
30265 ACGTTTGCCTCTTAAATAAGCCAAACATTAATAATCAAACTAATCCTCATTCCTTTTAGTTTTAG
1 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
* *
30330 GCACCATATACATAGTCTTCTCGTTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
66 GCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
* * * *
30395 TTTCTCCCCACCAATCATTGTAAAGTCTAAGTTCGTGCTTCAAATGAGA-TAATATGGATTCTAG
131 TTTTTCCCCACCAATCATTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATACGGATTCTAG
* **
30459 TAATGATCTTCAATCTTTTTTTGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
196 TAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
* ** *
30524 ATTGAAGTTTTTCTTTTGCCTGGAAACCTTTTCTTCATCTTATTTTCCTTAAAATGAAAGTTCAT
261 ATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCTTCGCCCTATTTTCCTTAAAATGAAAGTTCAT
* * *
30589 CCCTTGACTAAGAGAAGCATCGATTCTCCTAACAGTCTCCTTTCTTTCCAAGATTG-GAAGCCAA
326 CCCTTGAATAAGACAAGCATCGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCAA
30653 AACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTT-TTC
391 AACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTC
* *
30717 TCGTCGTTATTGATAGAATCA
456 GCGTCGTTTTTGATAGAATCA
30738 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
1 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
*
30803 GCACCATAAACATAGTCTTCTCATGAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
66 GCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
* * * *
30868 TTTCTCCCCACCAATCGTTGTAAAGTCTAAGTTCGTGCGTCAAATGAGACAAATAAGGATTCTAG
131 TTTTTCCCCACCAATCATTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATACGGATTCTAG
* * * *
30933 TAATAATCTTCCTTCTTTTTCTGATAAAACACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
196 TAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
*
30998 ATTGAAGTTTTTCTTTTGCTTGGAAATCTTTTCTTCGCCCTATTTTCCTTAAAATGAAAGTTCAT
261 ATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCTTCGCCCTATTTTCCTTAAAATGAAAGTTCAT
* *
31063 CCCTTGAATAAGACAAGCATCGATTCTCCTAACAGTCTCCTTTCTTTTCAACATTGGGAAGCCAA
326 CCCTTGAATAAGACAAGCATCGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCAA
* * * ** *
31128 AACACATTGTCTCTCTTAGGATATGCGACATTGATGCTTTGGTGTCACAAGAAAAGCTTTTCTTC
391 AACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTC
*
31193 GCGTCGTTATTGATAGAATCA
456 GCGTCGTTTTTGATAGAATCA
* * * * *
31214 ACATTTGTCTCTTAAATAAGCCAAACATTAATACTCAAAATAATCATCATTCTTTCTAGATTTAG
1 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
* * *
31279 GCACCATAAACATAGTCTTCTCATTAGGATACATGGTACTGATGCTTTGGTTTCGCAACAAAGGC
66 GCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
*
31344 TTTTTCCCCACCAATCATTGTAAAGTCTAAGTTCATGCCTCAAATGAGACAAATACGGATTCTAG
131 TTTTTCCCCACCAATCATTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATACGGATTCTAG
31409 TAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
196 TAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
* * *
31474 ATTGAAG-TTTTCTTTTGCGTGGAAATCTTTTCTCCGTCCTATTTTCCTTAAAATGAAAGTTCAT
261 ATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCTTCGCCCTATTTTCCTTAAAATGAAAGTTCAT
* *
31538 CCCTTGTATAAGACAAGCATTGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCAA
326 CCCTTGAATAAGACAAGCATCGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCAA
* * * *
31603 AACACATTCCCATTGTTAGGATACCTGACATTGATGCTTTGGTATCTCAAGAAAAGCTTTTCTTC
391 AACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTC
* *
31668 GCGTCATTTTTGATACAATCA
456 GCGTCGTTTTTGATAGAATCA
31689 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
1 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
* *
31754 GAACCAAAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
66 GCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
* * * *
31819 TTTTTTCCCACCAATCATTGTAAAGTCTAAGTTTGTGCCCCAAATGAGACAAATACAGATTCTAG
131 TTTTTCCCCACCAATCATTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATACGGATTCTAG
*
31884 TAATGAACTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
196 TAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
* *
31949 ATTGAAGTTTTTCTTTTGCGTGGAAATCTTTTCTCCGCCCTATTTTCCTTAAAATGAAAGTTCAT
261 ATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCTTCGCCCTATTTTCCTTAAAATGAAAGTTCAT
* * *
32014 CCCTTGTATAAGACAAGCCTTGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCAA
326 CCCTTGAATAAGACAAGCATCGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCAA
* * * *
32079 AACACATTCCCATTGTTAGGATACCTGACATTGATGCTTTGGTATCTCAAGAAAAGCTTTTCTTC
391 AACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTC
* *
32144 GCGTCATTTTTGATACAATCA
456 GCGTCGTTTTTGATAGAATCA
32165 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
1 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
* *
32230 GAACCAAAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
66 GCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
* * * *
32295 TTTTTTCCCACCAATCATTGTAAAGTCTAAGTTTGTGCCCCAAATGAGACAAATACAGATTCTAG
131 TTTTTCCCCACCAATCATTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATACGGATTCTAG
*
32360 TAATGAACTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
196 TAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
*
32425 ATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCCTCGCCCTATTTTCCTTAAAATGAAAGTTCAT
261 ATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCTTCGCCCTATTTTCCTTAAAATGAAAGTTCAT
*
32490 CCCTTGAATAAGACAAGCATCCATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCAA
326 CCCTTGAATAAGACAAGCATCGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCAA
* ** *
32555 AACACATTGCTTTTGTTAGGATA-CCGACAAAGATGCTTTGGTGTCTCAAGAAAAGCTTTTCCTC
391 AACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTC
* *
32619 GCATCCTTTTTGATAGAATCA
456 GCGTCGTTTTTGATAGAATCA
* * * * * *
32640 ACGTTTGCCTCTTAAATAAGCCAAACATTAATAATCAAACTAATCCTCATTCCTTTTAGTTTTAT
1 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
* *
32705 GCACCATATACATAGTCTTCTCGTTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
66 GCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
* * *
32770 TTTCTCCCCACCAATCATTGTAAAGTCTAAGTTCGTGCCTCAAATGAGA-TAATATGGATTCTAG
131 TTTTTCCCCACCAATCATTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATACGGATTCTAG
* **
32834 TAATGATCTTCAATCTTTTTTTGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
196 TAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
* ** *
32899 ATTGAAGTTTTTCTTTTGCCTGGAAACCTTTTCTTCATCTTATTTTCCTTAAAATGAAAGTTCAT
261 ATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCTTCGCCCTATTTTCCTTAAAATGAAAGTTCAT
*
32964 CCCTTGAATAAGAGAAGCATCGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTG-GAAGCCAA
326 CCCTTGAATAAGACAAGCATCGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCAA
33028 AACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTC
391 AACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTC
*
33093 GCGTCGTTATTGATAGAATCA
456 GCGTCGTTTTTGATAGAATCA
* *
33114 ACGTTTGTCTCTTAAATAAGCCAAACATTAATACTCAAACTAATCCTCATTTTTTTTAGATTTAG
1 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
* * *
33179 GCACCATAAACATAGTCTTCTCATTAGGATACATGGTACTGATGCTTTGGTTTCGCAACAAAGGC
66 GCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
* * * *
33244 TTTTTCACCACCAATCGTTGTAAAGTCTAAGTTCATGCCTCAAATGAGACAAATACGGATTCTAA
131 TTTTTCCCCACCAATCATTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATACGGATTCTAG
33309 TAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
196 TAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
* * * *
33374 ATTGAAGTTTTT-TTTTGCATGGAAATCTTTTCTTCGTCCTATTTTTCGTAAAATGAAAGTTCAT
261 ATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCTTCGCCCTATTTTCCTTAAAATGAAAGTTCAT
* * * * *
33438 CCCTTGTATATGACAAGCACCGATTCTCCTAACAGTCTCCTTTCTTTTCAATATTGGGAAGCCAA
326 CCCTTGAATAAGACAAGCATCGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCAA
* * * *
33503 AACAAATTTG-CATTGTTACGGA-ACCCGACATTGAGGCTTTGGTATCTCAAGAAAAGCTTTTCT
391 AACACA-TTGCCTTTGTTA-GGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCT
*
33566 TCGCGTCATTTTTGATAGAATCA
454 TCGCGTCGTTTTTGATAGAATCA
* *
33589 ACGTTTGCCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTTGATTTAG
1 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
* * * * * *
33654 GCACCATCAACATCGTCTTCTCCTTAGGATACATGGTACTGATGCTTTGGTTTCGCAACAAAGGC
66 GCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
* * *
33719 TTTTTCCCCACCAATCGTTGTAAAGTCTAAGTTCATGCCTCAAATGAGACAAATATGGATTCTAG
131 TTTTTCCCCACCAATCATTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATACGGATTCTAG
* * *
33784 TAGTGATCTTCATTCTTTTTTCGATCAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
196 TAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
* * *
33849 ATTGAAGTTTTTCCTTTGCGTGGAAATCTTTTCTCCGCCCTATTTTCCTTAAAATGAAAGTTCAT
261 ATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCTTCGCCCTATTTTCCTTAAAATGAAAGTTCAT
* *
33914 CCCTTGTATAAGACAAGCATTGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCAA
326 CCCTTGAATAAGACAAGCATCGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCAA
33979 AACACA
391 AACACA
33985 CGTTTGTCTC
Statistics
Matches: 4338, Mismatches: 315, Indels: 32
0.93 0.07 0.01
Matches are distributed among these distances:
473 249 0.06
474 1166 0.27
475 1724 0.40
476 1198 0.28
477 1 0.00
ACGTcount: A:0.30, C:0.22, G:0.14, T:0.35
Consensus pattern (476 bp):
ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
GCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
TTTTTCCCCACCAATCATTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATACGGATTCTAG
TAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
ATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCTTCGCCCTATTTTCCTTAAAATGAAAGTTCAT
CCCTTGAATAAGACAAGCATCGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCAA
AACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTC
GCGTCGTTTTTGATAGAATCA
Found at i:30682 original size:949 final size:950
Alignment explanation
Indices: 28840--33984 Score: 8200
Period size: 949 Copynumber: 5.4 Consensus size: 950
28830 GCCAAAACAC
*
28840 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCCTTTTAGATTTAG
1 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
*
28905 GCACCATAAATATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
66 GCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
* * * * *
28970 TTTTTTCCCACCAATCATTCTAAAGTCTAAGTTTGTGCCCCAAATGAGACAAATATGGATTCAAG
131 TTTTTCCCCACCAATCATTGTAAAGTCTAAGTTCGTGCCCCAAATGAGACAAATATAGATTCTAG
* *
29035 TAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCATCTTTAGGACAAAAGAC
196 TAATGAACTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
* * * * * * * *
29100 TTTGCAGTTTTTCTTTTGCCTAGAAAGCTTTTCTTTGCTCTATTTTCCTTAAAATGAAGGTTCAT
261 ATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCCTCGCCCTATTTTCCTTAAAATGAAAGTTCAT
* *
29165 CCCTTGAATAAGACAAGCATC-ATTTCTCCTAACAATCTCCTTTCTTTTCAAGATTGGGAAGCCA
326 CCCTTGAATAAGACAAGCATCGA-TTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCA
29229 AAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTT
390 AAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTT
*
29294 CGCGTCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAA
455 CGCGTCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCAAACATTAATACTCAAACTAA
* * *
29359 TCCTCATTACATTTAAATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGAT
520 TCCTCATTCCTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGAT
* *
29424 GCTTTGGTTTCGCAACAAAGGCTTTCTCCCCACCAATCGTTGTAAAGTCTAAGTTCGTGCCTCAA
585 GCTTTGGTTTCGCAACAAAGGCTTTTTCCCCACCAATCATTGTAAAGTCTAAGTTCGTGCCTCAA
* * * *
29489 ATGAGAC-AATATGGATTTTAGTAATGATCTTCGTTCTTTTTCTGATAAAGCACTACAAACACAT
650 ATGAGACAAATACGGATTCTAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACAT
* * *
29553 TCTCCTCTTTAGGACAAAAGACATTGAAGTTTTTCTTTTGCCTGGAAACCTTTTCTTCATCGTAT
715 TCTCCTCTTTAGGACAAAAGACATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCTTCGTCCTAT
* *
29618 TTTCCTTAAAATGAAAGTTCATCCCTTGACTAAGAGAAGCATCGATTCTCTTAACAGTCTCCTTT
780 TTTCCTTAAAATGAAAGTTCATCCCTTGA-TAAGACAAGCATCGATTCTCCTAACAGTCTCCTTT
*
29683 CTTTTCAAGACTGGAAGCCAAAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTG
844 CTTTTCAAGATTGGAAGCCAAAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTG
* * *
29748 TCTCAAGAAAAGCTTTTCTTCGCGTCGTTTTTAACAGAATCA
909 TCTCAAGAAAAGCTTTTCTTCGCGTCATTTTTGATAGAATCA
* *
29790 ATGTTTGTCTCTTAAATATGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
1 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
* * *
29855 GAACCAAAAACATAGTCTTCTCATTAGGATACACAATATTGATGCTTTGGTTTCGCAACAAAGGC
66 GCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
* * *
29920 TTTTTTCCCACCAATCATTGTAAAGTCTAAGTTTGTGCCCCAAATGAGACAAATACAGATTCTAG
131 TTTTTCCCCACCAATCATTGTAAAGTCTAAGTTCGTGCCCCAAATGAGACAAATATAGATTCTAG
29985 TAATGAACTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
196 TAATGAACTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
*
30050 TTTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCCTCGCCCTATTTTCCTTAAAATGAAAGTTCAT
261 ATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCCTCGCCCTATTTTCCTTAAAATGAAAGTTCAT
* *
30115 CCCTTGAATTAGACAAGCATCCATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCAA
326 CCCTTGAATAAGACAAGCATCGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCAA
* * *
30180 AACACATTGCTTTTGTTAGGATA-CCGACATAGATGCTTTGGTGTCTCAAGAAAAGCTTTTCCTC
391 AACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTC
* * * *
30244 GCATCCTTTTTGATAGAATCAACGTTTGCCTCTTAAATAAGCCAAACATTAATAATCAAACTAAT
456 GCGTCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCAAACATTAATACTCAAACTAAT
* * *
30309 CCTCATTCCTTTTAGTTTTAGGCACCATATACATAGTCTTCTCGTTAGGATACACGATATTGATG
521 CCTCATTCCTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATG
* *
30374 CTTTGGTTTCGCAACAAAGGCTTTCTCCCCACCAATCATTGTAAAGTCTAAGTTCGTGCTTCAAA
586 CTTTGGTTTCGCAACAAAGGCTTTTTCCCCACCAATCATTGTAAAGTCTAAGTTCGTGCCTCAAA
* * * **
30439 TGAGA-TAATATGGATTCTAGTAATGATCTTCAATCTTTTTTTGATAAAGCACTACAAACACATT
651 TGAGACAAATACGGATTCTAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATT
* * *
30503 CTCCTCTTTAGGACAAAAGACATTGAAGTTTTTCTTTTGCCTGGAAACCTTTTCTTCATCTTATT
716 CTCCTCTTTAGGACAAAAGACATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCTTCGTCCTATT
*
30568 TTCCTTAAAATGAAAGTTCATCCCTTGACTAAGAGAAGCATCGATTCTCCTAACAGTCTCCTTTC
781 TTCCTTAAAATGAAAGTTCATCCCTTGA-TAAGACAAGCATCGATTCTCCTAACAGTCTCCTTTC
*
30633 TTTCCAAGATTGGAAGCCAAAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGT
845 TTTTCAAGATTGGAAGCCAAAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGT
* * *
30698 CTCAAGAAAAGCTTTT-TTCTCGTCGTTATTGATAGAATCA
910 CTCAAGAAAAGCTTTTCTTCGCGTCATTTTTGATAGAATCA
30738 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
1 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
*
30803 GCACCATAAACATAGTCTTCTCATGAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
66 GCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
* * **
30868 TTTCTCCCCACCAATCGTTGTAAAGTCTAAGTTCGTGCGTCAAATGAGACAAATA-AGGATTCTA
131 TTTTTCCCCACCAATCATTGTAAAGTCTAAGTTCGTGCCCCAAATGAGACAAATATA-GATTCTA
* * *
30932 GTAAT-AATCTTCCTTCTTTTTCTGATAAAACACTACAAACACATTCTCCTCTTTAGGACAAAAG
195 GTAATGAA-CTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAG
* *
30996 ACATTGAAGTTTTTCTTTTGCTTGGAAATCTTTTCTTCGCCCTATTTTCCTTAAAATGAAAGTTC
259 ACATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCCTCGCCCTATTTTCCTTAAAATGAAAGTTC
* *
31061 ATCCCTTGAATAAGACAAGCATCGATTCTCCTAACAGTCTCCTTTCTTTTCAACATTGGGAAGCC
324 ATCCCTTGAATAAGACAAGCATCGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCC
* * * ** *
31126 AAAACACATTGTCTCTCTTAGGATATGCGACATTGATGCTTTGGTGTCACAAGAAAAGCTTTTCT
389 AAAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCT
* * *
31191 TCGCGTCGTTATTGATAGAATCAACATTTGTCTCTTAAATAAGCCAAACATTAATACTCAAAATA
454 TCGCGTCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCAAACATTAATACTCAAACTA
* * * *
31256 ATCATCATT-CTTTCTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACATGGTACTG
519 ATCCTCATTCCTTT-TAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTG
*
31320 ATGCTTTGGTTTCGCAACAAAGGCTTTTTCCCCACCAATCATTGTAAAGTCTAAGTTCATGCCTC
583 ATGCTTTGGTTTCGCAACAAAGGCTTTTTCCCCACCAATCATTGTAAAGTCTAAGTTCGTGCCTC
31385 AAATGAGACAAATACGGATTCTAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACAC
648 AAATGAGACAAATACGGATTCTAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACAC
* *
31450 ATTCTCCTCTTTAGGACAAAAGACATTGAAG-TTTTCTTTTGCGTGGAAATCTTTTCTCCGTCCT
713 ATTCTCCTCTTTAGGACAAAAGACATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCTTCGTCCT
*
31514 ATTTTCCTTAAAATGAAAGTTCATCCCTTGTATAAGACAAGCATTGATTCTCCTAACAGTCTCCT
778 ATTTTCCTTAAAATGAAAGTTCATCCCTTG-ATAAGACAAGCATCGATTCTCCTAACAGTCTCCT
* * *
31579 TTCTTTTCAAGATTGAGAAGCCAAAACACATTCCCATTGTTAGGATACCTGACATTGATGCTTTG
842 TTCTTTTCAAGATTG-GAAGCCAAAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTG
* *
31644 GTATCTCAAGAAAAGCTTTTCTTCGCGTCATTTTTGATACAATCA
906 GTGTCTCAAGAAAAGCTTTTCTTCGCGTCATTTTTGATAGAATCA
31689 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
1 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
* *
31754 GAACCAAAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
66 GCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
* * *
31819 TTTTTTCCCACCAATCATTGTAAAGTCTAAGTTTGTGCCCCAAATGAGACAAATACAGATTCTAG
131 TTTTTCCCCACCAATCATTGTAAAGTCTAAGTTCGTGCCCCAAATGAGACAAATATAGATTCTAG
31884 TAATGAACTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
196 TAATGAACTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
*
31949 ATTGAAGTTTTTCTTTTGCGTGGAAATCTTTT-CTCCGCCCTATTTTCCTTAAAATGAAAGTTCA
261 ATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCCT-CGCCCTATTTTCCTTAAAATGAAAGTTCA
* * *
32013 TCCCTTGTATAAGACAAGCCTTGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCA
325 TCCCTTGAATAAGACAAGCATCGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCA
* * * *
32078 AAACACATTCCCATTGTTAGGATACCTGACATTGATGCTTTGGTATCTCAAGAAAAGCTTTTCTT
390 AAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTT
* * *
32143 CGCGTCATTTTTGATACAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAA
455 CGCGTCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCAAACATTAATACTCAAACTAA
* * *
32208 TCCTCATTCTTTTTAGATTTAGGAACCAAAAACATAGTCTTCTCATTAGGATACACGATATTGAT
520 TCCTCATTCCTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGAT
* * *
32273 GCTTTGGTTTCGCAACAAAGGCTTTTTTCCCACCAATCATTGTAAAGTCTAAGTTTGTGCCCCAA
585 GCTTTGGTTTCGCAACAAAGGCTTTTTCCCCACCAATCATTGTAAAGTCTAAGTTCGTGCCTCAA
* *
32338 ATGAGACAAATACAGATTCTAGTAATGAACTTCATTCTTTTTCCGATAAAGCACTACAAACACAT
650 ATGAGACAAATACGGATTCTAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACAT
* *
32403 TCTCCTCTTTAGGACAAAAGACATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCCTCGCCCTAT
715 TCTCCTCTTTAGGACAAAAGACATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCTTCGTCCTAT
*
32468 TTTCCTTAAAATGAAAGTTCATCCCTTGAATAAGACAAGCATCCATTCTCCTAACAGTCTCCTTT
780 TTTCCTTAAAATGAAAGTTCATCCCTTG-ATAAGACAAGCATCGATTCTCCTAACAGTCTCCTTT
* **
32533 CTTTTCAAGATTGAGAAGCCAAAACACATTGCTTTTGTTAGGATA-CCGACAAAGATGCTTTGGT
844 CTTTTCAAGATTG-GAAGCCAAAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGT
* * *
32597 GTCTCAAGAAAAGCTTTTCCTCGCATCCTTTTTGATAGAATCA
908 GTCTCAAGAAAAGCTTTTCTTCGCGTCATTTTTGATAGAATCA
* * * * * *
32640 ACGTTTGCCTCTTAAATAAGCCAAACATTAATAATCAAACTAATCCTCATTCCTTTTAGTTTTAT
1 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
* *
32705 GCACCATATACATAGTCTTCTCGTTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
66 GCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
* * * *
32770 TTTCTCCCCACCAATCATTGTAAAGTCTAAGTTCGTGCCTCAAATGAGA-TAATATGGATTCTAG
131 TTTTTCCCCACCAATCATTGTAAAGTCTAAGTTCGTGCCCCAAATGAGACAAATATAGATTCTAG
* * **
32834 TAATGATCTTCAATCTTTTTTTGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
196 TAATGAACTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
* * ** *
32899 ATTGAAGTTTTTCTTTTGCCTGGAAACCTTTTCTTCATCTTATTTTCCTTAAAATGAAAGTTCAT
261 ATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCCTCGCCCTATTTTCCTTAAAATGAAAGTTCAT
*
32964 CCCTTGAATAAGAGAAGCATCGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTG-GAAGCCAA
326 CCCTTGAATAAGACAAGCATCGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCAA
33028 AACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTC
391 AACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTC
*
33093 GCGTCGTTATTGATAGAATCAACGTTTGTCTCTTAAATAAGCCAAACATTAATACTCAAACTAAT
456 GCGTCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCAAACATTAATACTCAAACTAAT
** * * *
33158 CCTCATTTTTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACATGGTACTGATG
521 CCTCATTCCTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATG
* * *
33223 CTTTGGTTTCGCAACAAAGGCTTTTTCACCACCAATCGTTGTAAAGTCTAAGTTCATGCCTCAAA
586 CTTTGGTTTCGCAACAAAGGCTTTTTCCCCACCAATCATTGTAAAGTCTAAGTTCGTGCCTCAAA
*
33288 TGAGACAAATACGGATTCTAATAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATT
651 TGAGACAAATACGGATTCTAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATT
*
33353 CTCCTCTTTAGGACAAAAGACATTGAAGTTTTT-TTTTGCATGGAAATCTTTTCTTCGTCCTATT
716 CTCCTCTTTAGGACAAAAGACATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCTTCGTCCTATT
* * * *
33417 TTTCGTAAAATGAAAGTTCATCCCTTGTATATGACAAGCACCGATTCTCCTAACAGTCTCCTTTC
781 TTCCTTAAAATGAAAGTTCATCCCTTG-ATAAGACAAGCATCGATTCTCCTAACAGTCTCCTTTC
* * * *
33482 TTTTCAATATTGGGAAGCCAAAACAAATTTG-CATTGTTACGGA-ACCCGACATTGAGGCTTTGG
845 TTTTCAAGATT-GGAAGCCAAAACACA-TTGCCTTTGTTA-GGATACCCGACATTGATGCTTTGG
*
33545 TATCTCAAGAAAAGCTTTTCTTCGCGTCATTTTTGATAGAATCA
907 TGTCTCAAGAAAAGCTTTTCTTCGCGTCATTTTTGATAGAATCA
* *
33589 ACGTTTGCCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTTGATTTAG
1 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
* * * * * *
33654 GCACCATCAACATCGTCTTCTCCTTAGGATACATGGTACTGATGCTTTGGTTTCGCAACAAAGGC
66 GCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
* * * *
33719 TTTTTCCCCACCAATCGTTGTAAAGTCTAAGTTCATGCCTCAAATGAGACAAATATGGATTCTAG
131 TTTTTCCCCACCAATCATTGTAAAGTCTAAGTTCGTGCCCCAAATGAGACAAATATAGATTCTAG
* * * *
33784 TAGTGATCTTCATTCTTTTTTCGATCAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
196 TAATGAACTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
* *
33849 ATTGAAGTTTTTCCTTTGCGTGGAAATCTTTT-CTCCGCCCTATTTTCCTTAAAATGAAAGTTCA
261 ATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCCT-CGCCCTATTTTCCTTAAAATGAAAGTTCA
* *
33913 TCCCTTGTATAAGACAAGCATTGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCA
325 TCCCTTGAATAAGACAAGCATCGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCA
33978 AAACACA
390 AAACACA
33985 CGTTTGTCTC
Statistics
Matches: 3882, Mismatches: 290, Indels: 45
0.92 0.07 0.01
Matches are distributed among these distances:
947 3 0.00
948 523 0.13
949 1374 0.35
950 902 0.23
951 939 0.24
952 141 0.04
ACGTcount: A:0.30, C:0.22, G:0.14, T:0.35
Consensus pattern (950 bp):
ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
GCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
TTTTTCCCCACCAATCATTGTAAAGTCTAAGTTCGTGCCCCAAATGAGACAAATATAGATTCTAG
TAATGAACTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
ATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCCTCGCCCTATTTTCCTTAAAATGAAAGTTCAT
CCCTTGAATAAGACAAGCATCGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCAA
AACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTC
GCGTCGTTTTTGATAGAATCAACGTTTGTCTCTTAAATAAGCCAAACATTAATACTCAAACTAAT
CCTCATTCCTTTTAGATTTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATG
CTTTGGTTTCGCAACAAAGGCTTTTTCCCCACCAATCATTGTAAAGTCTAAGTTCGTGCCTCAAA
TGAGACAAATACGGATTCTAGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATT
CTCCTCTTTAGGACAAAAGACATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCTTCGTCCTATT
TTCCTTAAAATGAAAGTTCATCCCTTGATAAGACAAGCATCGATTCTCCTAACAGTCTCCTTTCT
TTTCAAGATTGGAAGCCAAAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTC
TCAAGAAAAGCTTTTCTTCGCGTCATTTTTGATAGAATCA
Found at i:31821 original size:159 final size:159
Alignment explanation
Indices: 30668--32298 Score: 434
Period size: 159 Copynumber: 10.3 Consensus size: 159
30658 ATTGCCTTTG
* * * * * * *
30668 TTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTT-TTCTCGTC-GTTATTGAT
1 TTAGGATACACGACATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTCGCGCCAATTTTTGAT
* *
30731 AGAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTA
66 ACAATCAACGTTTGTCTCTTAAATAAGAC-AACATTAATACTCAAACTAATCCTCATTCTTTTTA
* * *
30796 GATTTAGGCACCATAAACATAGTCTTCTCA
130 GATTTAGGAACCAAAAACATAGTCTCCTCA
* * * * * * * **
30826 TGAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC-TTTCTCCCCACCAATCGTTG-T
1 TTAGGATACACGACATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTCGCGCCAATTTTTGAT
* * * * * *
30889 A-AAGTCTAA-GTTCGTGCGTC--AAATGAGACAA-A-TAAGGATTCTAGTAA-TAATCTTCCTT
66 ACAA-TC-AACGTTTGT-C-TCTTAAATAAGACAACATTAA-TACTC-A--AACTAATCCTCATT
* * * * * *
30947 CTTTTTCTGA--TA-AAACACTACAAACACATTCTCCTCT
123 CTTTTT-AGATTTAGGAAC-C-AAAAACATAGTCTCCTCA
* * * * * ** * ** * * * ***
30984 TTAGGACAAAAGACATTGAAGTTTTTCTTTTGCTTGGAAATCTTTTCTTCGC-CCTATTTTCCTT
1 TTAGGATACACGACATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTCGCGCCAATTTTTGAT
* * * ** * * ** * * * *
31048 AAAATGAAAGTTCATCCCTTGAATAAGACAAGCATCGATTCTCCTAAC-AGT-CTCCTTTCTTTT
66 ACAATCAACGTTTGTCTCTTAAATAAGACAA-CATTAATACT-CAAACTAATCCT-CATTCTTTT
* * * *
31111 CA-ACATTGGGAAGCCAAAACACATTGTCT-CTC-
128 TAGA-TTTAGGAA-CCAAAA-ACATAGTCTCCTCA
** * * * * *
31143 TTAGGATATGCGACATTGATGCTTTGGTGTCACAAGAAAAGCTTTTCTTCGCGTC-GTTATTGAT
1 TTAGGATACACGACATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTCGCGCCAATTTTTGAT
* * * * * *
31207 AGAATCAACATTTGTCTCTTAAATAAGCCAAACATTAATACTCAAAATAATCATCATTCTTTCTA
66 ACAATCAACGTTTGTCTCTTAAATAAGAC-AACATTAATACTCAAACTAATCCTCATTCTTTTTA
* * *
31272 GATTTAGGCACCATAAACATAGTCTTCTCA
130 GATTTAGGAACCAAAAACATAGTCTCCTCA
* ** * * * * * * **
31302 TTAGGATACATGGTACTGATGCTTTGGTTTCGCAACAAAGGCTTTT-TCCCCACCAATCATTG-T
1 TTAGGATACACGACATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTCGCGCCAATTTTTGAT
* * * * *
31365 A-AAGTCTAA-GTTCATG-C-CTCAAATGAGACAA-A-TACGGATTCT-AGTAA-TGATCTTCAT
66 ACAA-TC-AACGTT--TGTCTCTTAAATAAGACAACATTA---ATACTCA--AACTAATCCTCAT
* * * * * * * * *
31422 TCTTTTTCCGA-TAAAGCACTACAAACACATTCTCCTCT
122 TCTTTTT-AGATTTAGGAACCAAAAACATAGTCTCCTCA
* * * * ** * ** * * * ***
31460 TTAGGACAAAAGACATTGAAG-TTTTCTTTTGCGTGGAAATCTTTTC-TC-CGTCCTATTTTCCT
1 TTAGGATACACGACATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTCGCG-CCAATTTTTGA
* * * ** * ** * * * * *
31522 TAAAATGAAAGTTCATCCCTTGTATAAGACAAGCATTGATTCTCCTAAC-AGT-CTCCTTTCTTT
65 TACAATCAACGTTTGTCTCTTAAATAAGACAA-CATTAATACT-CAAACTAATCCT-CATTCTTT
* * **
31585 TCAAGATTGA-GAAGCCAAAACACAT--TC-CCATTG
127 T-TAGATTTAGGAA-CCAAAA-ACATAGTCTCC-TCA
* * *
31618 TTAGGATAC-CTGACATTGATGCTTTGGTATCTCAAGAAAAGCTTTTCTTCGCGTC-ATTTTTGA
1 TTAGGATACAC-GACATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTCGCGCCAATTTTTGA
*
31681 TACAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTT
65 TACAATCAACGTTTGTCTCTTAAATAAGAC-AACATTAATACTCAAACTAATCCTCATTCTTTTT
*
31746 AGATTTAGGAACCAAAAACATAGTCTTCTCA
129 AGATTTAGGAACCAAAAACATAGTCTCCTCA
* * * * * **
31777 TTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGCTTTT-TTCCCACCAATCATTG-T
1 TTAGGATACACGACATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTCGCGCCAATTTTTGAT
** * * * *
31840 A-AAGTCTAA-GTTTGTGC-CCCAAATGAGACAA-A-TACAGATTCTAGTAA-TGAA-CTTCATT
66 ACAA-TC-AACGTTTGT-CTCTTAAATAAGACAACATTA-ATACTC-A--AACT-AATCCTCATT
* * * * * * * * *
31898 CTTTTTCCGA-TAAAGCACTACAAACACATTCTCCTCT
123 CTTTTT-AGATTTAGGAACCAAAAACATAGTCTCCTCA
* * * * * ** * ** * * * * ***
31935 TTAGGACAAAAGACATTGAAGTTTTTCTTTTGCGTGGAAATCTTTTCTCCGC-CCTATTTTCCTT
1 TTAGGATACACGACATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTCGCGCCAATTTTTGAT
* * * ** * ** * * * * * *
31999 AAAATGAAAGTTCATCCCTTGTATAAGACAAGCCTTGATTCTCCTAAC-AGT-CTCCTTTCTTTT
66 ACAATCAACGTTTGTCTCTTAAATAAGACAA-CATTAATACT-CAAACTAATCCT-CATTCTTTT
* * **
32062 CAAGATTGA-GAAGCCAAAACACAT--TC-CCATTG
128 -TAGATTTAGGAA-CCAAAA-ACATAGTCTCC-TCA
* * *
32094 TTAGGATAC-CTGACATTGATGCTTTGGTATCTCAAGAAAAGCTTTTCTTCGCGTC-ATTTTTGA
1 TTAGGATACAC-GACATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTCGCGCCAATTTTTGA
*
32157 TACAATCAACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTT
65 TACAATCAACGTTTGTCTCTTAAATAAGAC-AACATTAATACTCAAACTAATCCTCATTCTTTTT
*
32222 AGATTTAGGAACCAAAAACATAGTCTTCTCA
129 AGATTTAGGAACCAAAAACATAGTCTCCTCA
* * *
32253 TTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGCTTTT
1 TTAGGATACACGACATTGATGCTTTGGTTTCGCAAGAAAAGCTTTT
32299 TTCCCACCAA
Statistics
Matches: 1004, Mismatches: 352, Indels: 233
0.63 0.22 0.15
Matches are distributed among these distances:
155 7 0.01
156 13 0.01
157 66 0.07
158 383 0.38
159 465 0.46
160 46 0.05
161 19 0.02
162 5 0.00
ACGTcount: A:0.30, C:0.21, G:0.14, T:0.35
Consensus pattern (159 bp):
TTAGGATACACGACATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTCGCGCCAATTTTTGAT
ACAATCAACGTTTGTCTCTTAAATAAGACAACATTAATACTCAAACTAATCCTCATTCTTTTTAG
ATTTAGGAACCAAAAACATAGTCTCCTCA
Found at i:34117 original size:395 final size:395
Alignment explanation
Indices: 33589--34379 Score: 1323
Period size: 395 Copynumber: 2.0 Consensus size: 395
33579 GATAGAATCA
*
33589 ACGTTTGCCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTTGATTTAG
1 ACGTTTGCCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
* ** * * * *
33654 GCACCATCAACATCGTCTTCTCCTTAGGATACATGGTACTGATGCTTTGGTTTCGCAACAAAGGC
66 GAACCAAAAACATAGTCTTCTCATTAGGATACACGATACTGATGCTTTGGTTTCGCAACAAAGGC
* **
33719 TTTTTCCCCACCAATCGTTGTAAAGTCTAAGTTCATGCCTCAAATGAGACAAATATGGATTCTAG
131 TTTTTCCCCACCAATCGTTGTAAAGTCTAAGTTCATGCCCCAAATGAGACAAATACAGATTCTAG
* * * *
33784 TAGTGATCTTCATTCTTTTTTCGATCAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
196 TAATGAACTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
*
33849 ATTGAAGTTTTTCCTTTGCGTGGAAATCTTTT-CTCCGCCCTATTTTCCTTAAAATGAAAGTTCA
261 ATTGAAGTTTTTCCTTTGCCTGGAAATCTTTTCCT-CGCCCTATTTTCCTTAAAATGAAAGTTCA
* ** *
33913 TCCCTTGTATAAGACAAGCATTGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCA
325 TCCCTTGAATAAGACAAGCATCCATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCAA
33978 AAACAC
390 AAACAC
*
33984 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
1 ACGTTTGCCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
*
34049 GAACCAAAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
66 GAACCAAAAACATAGTCTTCTCATTAGGATACACGATACTGATGCTTTGGTTTCGCAACAAAGGC
* **
34114 TTTTTTCCCACCAATCGTTGTAAAGTCTAAGTTTGTGCCCCAAATGAGACAAATACAGATTCTAG
131 TTTTTCCCCACCAATCGTTGTAAAGTCTAAGTTCATGCCCCAAATGAGACAAATACAGATTCTAG
34179 TAATGAACTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
196 TAATGAACTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
*
34244 ATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCCTCGCCCTATTTTCCTTAAAATGAAAGTTCAT
261 ATTGAAGTTTTTCCTTTGCCTGGAAATCTTTTCCTCGCCCTATTTTCCTTAAAATGAAAGTTCAT
*
34309 CCCTTGAATAAGACAAGCATCCATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGGGAAGCAAA
326 CCCTTGAATAAGACAAGCATCCATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCAAA
34374 AACAC
391 AACAC
34379 A
1 A
34380 TTGCCATTGT
Statistics
Matches: 368, Mismatches: 27, Indels: 2
0.93 0.07 0.01
Matches are distributed among these distances:
395 366 0.99
396 2 0.01
ACGTcount: A:0.30, C:0.23, G:0.13, T:0.34
Consensus pattern (395 bp):
ACGTTTGCCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
GAACCAAAAACATAGTCTTCTCATTAGGATACACGATACTGATGCTTTGGTTTCGCAACAAAGGC
TTTTTCCCCACCAATCGTTGTAAAGTCTAAGTTCATGCCCCAAATGAGACAAATACAGATTCTAG
TAATGAACTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
ATTGAAGTTTTTCCTTTGCCTGGAAATCTTTTCCTCGCCCTATTTTCCTTAAAATGAAAGTTCAT
CCCTTGAATAAGACAAGCATCCATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCAAA
AACAC
Found at i:34767 original size:476 final size:475
Alignment explanation
Indices: 33984--36754 Score: 4419
Period size: 476 Copynumber: 5.8 Consensus size: 475
33974 GCCAAAACAC
33984 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
1 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
* *
34049 GAACCAAAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
66 GCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
* * *
34114 TTTTTTCCCACCAATCGTTGTAAAGTCTAAGTTTGTGCCCCAAATGAGACAAATACA-GATTCTA
131 TTTCTTCCCACCAATCGTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATA-AGGATTCTA
34178 GTAATGAA-CTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAG
195 GTAAT-AATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAG
*
34242 ACATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCCTCGCCCTATTTTCCTTAAAATGAAAGTTC
259 ACATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCTTCGCCCTATTTTCCTTAAAATGAAAGTTC
* * *
34307 ATCCCTTGAATAAGACAAGCATCCATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGGGAAGCA
324 ATCCCTTGAATAAGACAAGCATCGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCC
34372 AAAACACATTGCCATTGTTAGGATAGCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCT
389 AAAACACATTGCCATTGTTAGGATA-CCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCT
* *
34437 TCACGTCGTTTTTGATAGATTCA
453 TCGCGTCGTTTTTGATAGAATCA
*
34460 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCCTTTTAGATTTAG
1 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
* * *
34525 GCACCATAAATATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCACAACTAAGGC
66 GCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
* *
34590 TTTCTTCCCACCAATCATTGTAAAGTCTAAGTTCGTGCGTCAAATGAGACAAATAAGGATTCTAG
131 TTTCTTCCCACCAATCGTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATAAGGATTCTAG
* * * * *
34655 TAATAATCTTCCTTCTTTTTCTGATAAAACACTATAAACACATTCTCCTCTTTAGGACAAAATAC
196 TAATAATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
*
34720 ATTGAAGTTTTTCTTTTGCTTGGAAATCTTTTCTTCGCCCTATTTTCCTTAAAATGAAAGTTCAT
261 ATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCTTCGCCCTATTTTCCTTAAAATGAAAGTTCAT
* *
34785 CCCTTGAATAAGACAAGCATCGATTCTCCTAACAGTCTCCTTTCTTTTCAACATTGGGAAGCCAA
326 CCCTTGAATAAGACAAGCATCGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCAA
* *
34850 AACACATTGCC-TCTCTTAGGATATGCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTT
391 AACACATTGCCAT-TGTTAGGATA-CCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTT
*
34914 CGCGTCGTTATTGATAGAATCA
454 CGCGTCGTTTTTGATAGAATCA
* * *
34936 ACATTTGTCTCTTAAATAAGCCAAACATTAATACTCAAACTAATCATCATTCTTTTTAGATTTAG
1 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
* * * *
35001 GCACCATAAACATAGTCTTCTCATTATGATACATGGTACTGATGCTTTGGTTTCGCAACAAAGGC
66 GCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
* * *
35066 TTT-TTCCCCACCAATTGTTGTAAAGTCTAAGTTCATGCCTCAAATGAGACAAATACGGATTCTA
131 TTTCTT-CCCACCAATCGTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATAAGGATTCTA
*
35130 GTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGA
195 GTAATAATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGA
* *
35195 CATTGAAGTTTTTCTTTTGCGTGGAAATCTTTTCTCCGCCCTATTTTCCTTAAAATGAAAGTTCA
260 CATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCTTCGCCCTATTTTCCTTAAAATGAAAGTTCA
* *
35260 TCCCTTGTATAAGACAAGCATTGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCA
325 TCCCTTGAATAAGACAAGCATCGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCA
* * *
35325 AAACACATTCCCATTGTTAGGATACCTGACATTGATGCTTTGGTATCTCAAGAAAAGCTTCTCTT
390 AAACACATTGCCATTGTTAGGATACC-GACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTT
* * *
35390 CGCATCATTTTTGATACAATCA
454 CGCGTCGTTTTTGATAGAATCA
35412 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
1 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
* * *
35477 GAACCAAAAACATAGTCTTCTCATTAGGATACACAATATTGATGCTTTGGTTTCGCAACAAAGGC
66 GCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
* * * *
35542 TTTTTTCCCACCAATCATTGTAAAGTCTAAGTTTGTGCCCCAAATGAGACAAATACA-GATTCTA
131 TTTCTTCCCACCAATCGTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATA-AGGATTCTA
35606 GTAATGAA-CTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAG
195 GTAAT-AATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAG
* *
35670 ACATTGAAGTTTTGCTTTTGCCTGGAAATCTTTTCCTCGCCCTATTTTCCTTAAAATGAAAGTTC
259 ACATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCTTCGCCCTATTTTCCTTAAAATGAAAGTTC
* *
35735 ATCCCTTGAATTAGACAAGCATCCATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCC
324 ATCCCTTGAATAAGACAAGCATCGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCC
** * *
35800 AAAACACATTGCTTTTGTTAGGATACCGACATAGATGCTTTGGTGTCTCAAGAAAAGCTTTTCCT
389 AAAACACATTGCCATTGTTAGGATACCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTT
* *
35865 CGCATCCTTTTTGATAGAATCA
454 CGCGTCGTTTTTGATAGAATCA
* * * * *
35887 ACGTTTGCCTCTTAAATAAGCCAAACATTAATAATCAAACTAATCCTCATTCCTTTTAGTTTTAG
1 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
* *
35952 GCACCATATACATAGTCTTCTCGTTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
66 GCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
* * * *
36017 TTTCTCCCCACCAATCGTTGTAAAGTCTAAGTTCGTGCTTCAAATGAGA-TAATATGGATTCTAG
131 TTTCTTCCCACCAATCGTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATAAGGATTCTAG
* * **
36081 TAATGATCTTCAATCTTTTTTTGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
196 TAATAATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
* ** *
36146 ATTGAAGTTTTTCTTTTGCCTGGAAACCTTTTCTTCATCTTATTTTCCTTAAAATGAAAGTTCAT
261 ATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCTTCGCCCTATTTTCCTTAAAATGAAAGTTCAT
* * *
36211 CCCTTGACTAAGAGAAGCATCGATTCTCCTAACAGTCTCCTTTCTTTCCAAGATTG-GAAGCCAA
326 CCCTTGAATAAGACAAGCATCGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCAA
*
36275 AACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTT-TTC
391 AACACATTGCCATTGTTAGGATA-CCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTC
* *
36339 TCGTCGTTATTGATAGAATCA
455 GCGTCGTTTTTGATAGAATCA
36360 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
1 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
*
36425 GCACCATAAACATAGTCTTCTCATGAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
66 GCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
* * * *
36490 TTTCTCCCCACCAATCGTTGTAAAGTCTAAGTTCGTGCTTCAAATGAGA-TAATATGGATTCTAG
131 TTTCTTCCCACCAATCGTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATAAGGATTCTAG
* * **
36554 TAATGATCTTCAATCTTTTTTTGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
196 TAATAATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
* ** *
36619 ATTGAAGTTTTTCTTTTGCCTGGAAACCTTTTCTTCATCTTATTTTCCTTAAAATGAAAGTTCAT
261 ATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCTTCGCCCTATTTTCCTTAAAATGAAAGTTCAT
* * *
36684 CCCTTGTATAAGATAAGCATTGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCAA
326 CCCTTGAATAAGACAAGCATCGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCAA
36749 AACACA
391 AACACA
36755 CGTTTGTCTC
Statistics
Matches: 2131, Mismatches: 151, Indels: 28
0.92 0.07 0.01
Matches are distributed among these distances:
473 417 0.20
474 231 0.11
475 224 0.11
476 1255 0.59
477 4 0.00
ACGTcount: A:0.30, C:0.21, G:0.14, T:0.35
Consensus pattern (475 bp):
ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
GCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
TTTCTTCCCACCAATCGTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATAAGGATTCTAG
TAATAATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
ATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCTTCGCCCTATTTTCCTTAAAATGAAAGTTCAT
CCCTTGAATAAGACAAGCATCGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCAA
AACACATTGCCATTGTTAGGATACCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCG
CGTCGTTTTTGATAGAATCA
Found at i:37651 original size:476 final size:474
Alignment explanation
Indices: 36754--40005 Score: 5034
Period size: 476 Copynumber: 6.8 Consensus size: 474
36744 GCCAAAACAC
36754 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
1 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
* *
36819 GAACCAAAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
66 GCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
* * * *
36884 TTTTTTCCCACCAATCATTGTAAAGTCTAAGTTTGTGCCCCAAATGAGACAAATACCGATTCTAG
131 TTTTTTCCCACCAATCGTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATACGGATTCTAG
*
36949 TAATGAACTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
196 TAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
*
37014 ATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCCTCGCCCTATTTTCCTTAAAATGAAAGTTCAT
261 ATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCTTCGCCCTATTTTCCTTAAAATGAAAGTTCAT
* * *
37079 CCCTTGAATAAGACAAGCATCCATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGGGAAGCAAA
326 CCCTTGAATAAGACAAGCATCGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCAA
37144 AACACATTGCCATTGTTAGGATAGCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTC
391 AACACATTGCC-TTGTTAGGATA-CCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTC
* *
37209 ACGTCGTTTTTGATAGATTCA
454 GCGTCGTTTTTGATAGAATCA
**
37230 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCCATTTAGATTTAG
1 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
* * *
37295 GCACCATAAATATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCACAACTAAGGC
66 GCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
* * *
37360 TTTCTTCCCACCAATCGTTGTAAAGTCTAAGTTCGTGCGTCAAATGAGACAAATAAGGATTCTAG
131 TTTTTTCCCACCAATCGTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATACGGATTCTAG
* * * * * *
37425 TAATAATCTTCCTTCTTTTTCTGATAAAACACTATAAACACATTCTCCTCTTTAGGACAAAATAC
196 TAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
*
37490 ATTGAAGTTTTTCTTTTGCTTGGAAATCTTTTCTTCGCCCTATTTTCCTTAAAATGAAAGTTCAT
261 ATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCTTCGCCCTATTTTCCTTAAAATGAAAGTTCAT
* * *
37555 CCCTTGAATAAGACAAGCATCGATTCTCGTAACAGTCTCCTTTCTTTTCAACATTGGGAAGCCAA
326 CCCTTGAATAAGACAAGCATCGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCAA
* *
37620 AACACATTGCCTCTCTTAGGATATGCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTC
391 AACACATTGCCT-TGTTAGGATA-CCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTC
*
37685 GCGTCGTTATTGATAGAATCA
454 GCGTCGTTTTTGATAGAATCA
* * *
37706 ACATTTGTCTCTTAAATAAGCCAAACATTAATACTCAAACTAATCATCATTCTTTTTAGATTTAG
1 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
* * * *
37771 GCACCATAAACATAGTCTTCTCATTATGATACATGGTACTGATGCTTTGGTTTCGCAACAAAGGC
66 GCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
* * * *
37836 TTTTTCCCCACCAATTGTTGTAAAGTCTAAGTTCATGCCTCAAATGAGACAAATCCGGATTCTAG
131 TTTTTTCCCACCAATCGTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATACGGATTCTAG
37901 TAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
196 TAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
* *
37966 ATTGAAGTTTTTCTTTTGCGTGGAAATCTTTTCTCCGCCCTATTTTCCTTAAAATGAAAGTTCAT
261 ATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCTTCGCCCTATTTTCCTTAAAATGAAAGTTCAT
* *
38031 CCCTTGTATAAGACAAGCATTGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCAA
326 CCCTTGAATAAGACAAGCATCGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCAA
* * *
38096 AACACATTCCCATTGTTAGGATACCTGACATTGATGCTTTGGTATCTCAAGAAAAGCTTCTCTTC
391 AACACATTGCC-TTGTTAGGATACC-GACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTC
* * *
38161 GCATCATTTTTGATACAATCA
454 GCGTCGTTTTTGATAGAATCA
38182 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
1 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
* *
38247 GAACCAAAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
66 GCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
* * * *
38312 TTTTTTCCCACCAATCATTGTAAAGTCTAAGTTTGTGCCCCAAATGAGACAAATACAGATTCTAG
131 TTTTTTCCCACCAATCGTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATACGGATTCTAG
*
38377 TAATGAACTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGAC-AAAGAC
196 TAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
*
38441 ATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCCTCGCCCTATTTTCCTTAAAATGAAAGTTCAT
261 ATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCTTCGCCCTATTTTCCTTAAAATGAAAGTTCAT
38506 CCCTTGAAT-AGACAAGCATC-ATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCAA
326 CCCTTGAATAAGACAAGCATCGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCAA
* ** *
38569 AACACATTGCTTTTGTTAGGATACCGACAAAGATGCTTTGGTGTCTCAAGAAAAGCTTTTCCTCG
391 AACACATTGC-CTTGTTAGGATACCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCG
* *
38634 CATCCTTTTTGATAGAATCA
455 CGTCGTTTTTGATAGAATCA
* * * * *
38654 ACGTTTGCCTCTTAAATAAGCCAAACATTAATAATCAAACTAATCCTCATTCCTTTTAGTTTTAG
1 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
* * *
38719 GCACCATATACATAGTCTTCTCGTTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGT
66 GCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
* * *
38784 TTTTTCTCCCCACCAATCATTGTAAAGTCTAAGTTCGTGCCTCAAATGAGA-TAATATGGATTCT
131 TTTTT-T-CCCACCAATCGTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATACGGATTCT
* **
38848 AGTAATGATCTTCAATCTTTTTTTGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAG
194 AGTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAG
* ** *
38913 ACATTGAAGTTTTTTCTTTTGCCTGGAAACCTTTTCTTCATCTTATTTTCCTTAAAATGAAAGTT
259 ACATTGAAG-TTTTTCTTTTGCCTGGAAATCTTTTCTTCGCCCTATTTTCCTTAAAATGAAAGTT
* *
38978 CATCCCTTGACTAAGAGAAGCATCGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATT--GAAGC
323 CATCCCTTGAATAAGACAAGCATCGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGC
39041 CAAAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTC
388 CAAAACACATTGCC-TTGTTAGGATA-CCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTC
*
39106 TTCGCGTCGTTATTGATAGAATCA
451 TTCGCGTCGTTTTTGATAGAATCA
* *
39130 ACGTTTGTCTCTTAAATAAGCCAAACATTAATACTCAAACTAATCCTCATTTTTTTTAGATTTAG
1 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
* * *
39195 GCACCATAAACATAGTCTTCTCATTAGGATACATGGTACTGATGCTTTGGTTTCGCAACAAAGGC
66 GCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
*
39260 TTTTTTCACCACCAATCGTTGTAAAGTCTAAGTTCATGCCTCAAATGAGACAAATACGGATTCTA
131 TTTTTTC-CCACCAATCGTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATACGGATTCTA
*
39325 ATAATGATCTTCATTC-TTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGA
195 GTAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGA
* * * * *
39389 CATTGAAGTTTTTTTTTTTGCATGGAAATCTTTCTTTCTTCGTCCTATTTTTTCGTAAAATGAAA
260 CATTGAAG-TTTTTCTTTTGCCTGGAAATC--T-TTTCTTCGCCCTA-TTTTCCTTAAAATGAAA
* * * * *
39454 GTTTCATCCCTTGTATATGACAAGCACCGATTCTCCTAACAGTCTCCTTTCTTTTCAATATTGGG
320 G-TTCATCCCTTGAATAAGACAAGCATCGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAG
* * * *
39519 AAGCCAAAACAAATTTGCATTGTTACGGA-ACCCGACATTGAGGCTTTGGTATCTCAAGAAAAGC
384 AAGCCAAAACACA-TTGCCTTGTTA-GGATA-CCGACATTGATGCTTTGGTGTCTCAAGAAAAGC
*
39583 TTTTCTTCGCGTCATTTTTGATAGAATCA
446 TTTTCTTCGCGTCGTTTTTGATAGAATCA
*
39612 ACGTTTGCCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTT-GATTTAG
1 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
* * * * * *
39676 GCACCATCAACATCGTCTTCTCCTTAGGATACATGGTACTGATGCTTTGGTTTCGCAACAAAGGC
66 GCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
* * *
39741 TTTTTCCCCACCAATCGTTGTAAAGTCTAAGTTCATGCCTCAAATGAGAC-AATATGGATTCTAG
131 TTTTTTCCCACCAATCGTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATACGGATTCTAG
* *
39805 TAGTGATCTTCATTCTTTTT-CGATCAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
196 TAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
* * *
39869 ATTGAGAAGTTTTTCCTTTGCGTGGAAATCTTTTCTCCGCCCTATTTTCCTTAAAATGAAAGTTC
261 ATT--GAAGTTTTTCTTTTGCCTGGAAATCTTTTCTTCGCCCTATTTTCCTTAAAATGAAAGTTC
* *
39934 ATCCCTTGTAT-AGACAAGCATTGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCC
324 ATCCCTTGAATAAGACAAGCATCGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCC
39998 AAACACAC
389 AAA-ACAC
40006 GTTTGTCTCT
Statistics
Matches: 2548, Mismatches: 201, Indels: 55
0.91 0.07 0.02
Matches are distributed among these distances:
472 178 0.07
473 132 0.05
474 116 0.05
475 299 0.12
476 1339 0.53
477 46 0.02
478 12 0.00
479 88 0.03
480 119 0.05
481 79 0.03
482 133 0.05
483 7 0.00
ACGTcount: A:0.30, C:0.22, G:0.14, T:0.35
Consensus pattern (474 bp):
ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
GCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
TTTTTTCCCACCAATCGTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATACGGATTCTAG
TAATGATCTTCATTCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
ATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCTTCGCCCTATTTTCCTTAAAATGAAAGTTCAT
CCCTTGAATAAGACAAGCATCGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCAA
AACACATTGCCTTGTTAGGATACCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTCTTCGC
GTCGTTTTTGATAGAATCA
Found at i:42424 original size:469 final size:475
Alignment explanation
Indices: 40004--42749 Score: 4112
Period size: 474 Copynumber: 5.8 Consensus size: 475
39994 AGCCAAACAC
40004 ACGTTTGTCTCTTAAATAAG-CGAACATTAAATACTCAAACTAATCCTCATTCTTTTTAGATTTA
1 ACGTTTGTCTCTTAAATAAGCCGAACATT-AATACTCAAACTAATCCTCATTCTTTTTAGATTTA
40068 GG-ACCA-AAACATAGTCTTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAG
65 GGCACCATAAACATAGTC-TTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAG
* * * * **
40131 GCTTTTTTCCCACCAATCGTTGTAAAGTCTAAGTTTGTGCCCCAAATGAGACAAATACAGATTCT
129 GCTTTCTCCCCACCAATCGTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATATGGATTCT
* *
40196 AGTAATGAACTTCATTCTTTTTCCGATAAAGCACTACAAACACA-TCTCCTCTTTAGGACAAAAG
194 AGTAATGATCTTCAATCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAG
*
40260 ACATTGAAG-TTTTCTTTTGCCTGGAAATCTTTTCCTCGCCCTATTTTCCTTAAAATGAAAGTTC
259 ACATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCTTCGCCCTATTTTCCTTAAAATGAAAGTTC
* *
40324 ATCCCTTGAATAAGACAAGCATCCATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGGGAAG-C
324 ATCCCTTGAATAAGACAAGCATCGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCC
* *
40388 AAAACACATTGCCATTGTTAGGATAGCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTTC
389 AAAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGC-TTTT-
* *
40453 TTCACGTCGTTTTTGATAGATTCA
452 TTCGCGTCGTTTTTGATAGAATCA
*
40477 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCCTCATTCCTTTTAGATTTA
1 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAAT-CCTCATTCTTTTTAGATTTA
* * *
40542 GGCACCATAAATATAGTCTTCTCATTAGGATACACGAT-TTGATGCTTTGGTTTCACAACTAAGG
65 GGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGG
* * *
40606 CTTTCTTCCCACCAATCGTTGTAAAGTCTAAGTTCGTGCGTCAAATGAGACAAATAAGGATTCTA
130 CTTTCTCCCCACCAATCGTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATATGGATTCTA
* ** * * * *
40671 GT-ATAATCTTCCTTCTTTTTCTGATAAAACACTA-TAACACATTC-CCTCTTTAGGAC-AAATA
195 GTAATGATCTTCAATCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGA
*
40732 CATTGAAGTTTTTCTTTTGCTTGGAAATCTTTTCTTCGCCCTATTTTCCTTAAAATGAAATGTTC
260 CATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCTTCGCCCTATTTTCCTTAAAATGAAA-GTTC
*
40797 ATCCCTTGAATAAGACAAGCATCGATTCTCCCTAACAGTCTCCTTTCTTTTCAACATTG-GAAGC
324 ATCCCTTGAATAAGACAAGCATCGATTCT-CCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGC
* * **
40861 CAAAACACATTGCCTCTCTTAGGATATGCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTC
388 CAAAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTT-
*
40926 TTCGCGTCGTTATTGATAGAATCA
452 TTCGCGTCGTTTTTGATAGAATCA
* * *
40950 ACATTTGTCTCTTAAATAAGCCAAACATTAATACTCAAACTAATCATCA-T-TTTTTAGATTTAG
1 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
* * * *
41013 GCACCATAAACATAGTC-TC-CATTATGATACATGGTACTGATGCTTTGGTTTCGCAACAAAGGC
66 GCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
* * * *
41076 TTTTTCCCCACCAATTGTTGTAAAGTCTAAGTTCATGCCTCAAATGAGACAAAT-CGGATTCTAG
131 TTTCTCCCCACCAATCGTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATATGGATTCTAG
*
41140 T-ATGAT-TTCATTC-TTTTCCGATAAAGCACTAC-AA-ACATTCTCCTCTTTAGGAC-AAAGAC
196 TAATGATCTTCAATCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
* *
41199 ATTGAAGTTTTT-TTTTGCGTGGAAATCTTTTCTCCGCCCTATTTTCCTTAAAATGAAAGTTCAT
261 ATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCTTCGCCCTATTTTCCTTAAAATGAAAGTTCAT
* *
41263 CCCTTGTATAAGACAAGCATTGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCAA
326 CCCTTGAATAAGACAAGCATCGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCAA
* * * * *
41328 AACACATTCCCATTGTTAGGATACCTGACATTGATGCTTTGGTATCTCAAGAAAAGCTTCTCTTC
391 AACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTT-TTTTC
* * *
41393 GCATCATTTTTGATACAATCA
455 GCGTCGTTTTTGATAGAATCA
41414 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
1 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
* * *
41479 GAACCAAAAACATAGTCTTCTCATTAGGATACACAATATTGATGCTTTGGTTTCGCAACAAAGGC
66 GCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
* * * * * **
41544 TTTTTTCCCACACAATCATTGTAAAGTCTAAGTTTGTGCCCCAAATGAGACAAATACAGATTCTA
131 TTTCTCCCCAC-CAATCGTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATATGGATTCTA
*
41609 GTAATGAACTTC-ATCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGA
195 GTAATGATCTTCAATCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGA
* *
41673 CATTGAAGTTTTGCTTTTGCCTGGAAATCTTTTCCTCGCCCTATTTTCCTTAAAATGAAAGTTCA
260 CATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCTTCGCCCTATTTTCCTTAAAATGAAAGTTCA
*
41738 TCCCTTGAAT-AGACAAGCATCCATTCTCCTAACAGTCTCCTCTTTCTTTTCAAGATTGAGAAGC
325 TCCCTTGAATAAGACAAGCATCGATTCTCCTAACAGTCT-C-CTTTCTTTTCAAGATTGAGAAGC
* *
41802 CAAAACACATTGCTTTTGTTAGGATA-CCGACATAGATGCTTTGGTGTCTCAAGAAAAGCTTTTC
388 CAAAACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTT-
* * *
41866 CTC-CCTCCTTTTTGATAGAATCA
452 TTCGCGTCGTTTTTGATAGAATCA
* * * * *
41889 ACGTTTGCCTCTTAAATAAGCCAAACATTAATAATCAAACTAATCCTCATTCCTTTTAGTTTTAG
1 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
* *
41954 GCACCATATACATAGTCTTCTCGTTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
66 GCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
* *
42019 TTTCTCCCCACCAATCGTTGTAAAGTCTAAGTTCGTGCTTCAAATGAGA-TAATATGGATTCTAG
131 TTTCTCCCCACCAATCGTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATATGGATTCTAG
**
42083 TAATGATCTTCAATCTTTTTTTGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
196 TAATGATCTTCAATCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
* ** *
42148 ATTGAAGTTTTTCTTTTGCCTGGAAA-CCTTTCTTCATCTTA-TTTCCTTAAAATGAAAGTTCAT
261 ATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCTTCGCCCTATTTTCCTTAAAATGAAAGTTCAT
* * *
42211 CCCTTGACTAAGAGAAGCATCGATTCTCCTAACAGTCTCCTTTCTTTCCAAGATTG-GAAGCCAA
326 CCCTTGAATAAGACAAGCATCGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCAA
*
42275 AACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTC-A-AAAAGCTTTTTTCT
391 AACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTTTCG
*
42338 CGTCGTTATTGATAGAATCA
456 CGTCGTTTTTGATAGAATCA
42358 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
1 ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
*
42423 GCACCATAAACATAGTCTTCTCATGAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
66 GCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
* *
42488 TTTCTCCCCCACCAATCGTTGTAAAGTCTAAGTTCGTGCTTCAAATGAGA-TAATATGGATTCTA
131 TTTCT-CCCCACCAATCGTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATATGGATTCTA
**
42552 GTAATGATCTTCAATCTTTTTTTGAT-AAGCACTAC-AACACATTCTCCTCTTTAGGACAAAAGA
195 GTAATGATCTTCAATCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGA
* **
42615 CATTGAAGTTTTTCTTTTGCCTGGAAACCTTTTCTTC-TTC-ATTTTCCTTAAAATGAAAGTTCA
260 CATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCTTCGCCCTATTTTCCTTAAAATGAAAGTTCA
* *
42678 TCCCTTGTATAAGACAAGCATTGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCA
325 TCCCTTGAATAAGACAAGCATCGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCA
42743 AAACACA
390 AAACACA
42750 CGTTTGTCTC
Statistics
Matches: 2075, Mismatches: 160, Indels: 80
0.90 0.07 0.03
Matches are distributed among these distances:
463 28 0.01
464 156 0.08
465 52 0.03
466 75 0.04
467 9 0.00
468 207 0.10
469 298 0.14
470 153 0.07
471 58 0.03
472 124 0.06
473 228 0.11
474 326 0.16
475 214 0.10
476 101 0.05
477 46 0.02
ACGTcount: A:0.30, C:0.22, G:0.14, T:0.35
Consensus pattern (475 bp):
ACGTTTGTCTCTTAAATAAGCCGAACATTAATACTCAAACTAATCCTCATTCTTTTTAGATTTAG
GCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAACAAAGGC
TTTCTCCCCACCAATCGTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAATATGGATTCTAG
TAATGATCTTCAATCTTTTTCCGATAAAGCACTACAAACACATTCTCCTCTTTAGGACAAAAGAC
ATTGAAGTTTTTCTTTTGCCTGGAAATCTTTTCTTCGCCCTATTTTCCTTAAAATGAAAGTTCAT
CCCTTGAATAAGACAAGCATCGATTCTCCTAACAGTCTCCTTTCTTTTCAAGATTGAGAAGCCAA
AACACATTGCCTTTGTTAGGATACCCGACATTGATGCTTTGGTGTCTCAAGAAAAGCTTTTTTCG
CGTCGTTTTTGATAGAATCA
Done.