Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1655
Parameters: 2 7 7 80 10 50 1000
Length:  16426

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1805--1844
15
2.7
15
85
14
57
35
0
2
62
1.09
2553--2580
14
2.0
14
100
0
56
28
7
0
64
1.20
2893--2921
2
14.5
2
100
0
58
48
0
0
51
1.00
6209--6245
1
37.0
1
100
0
74
0
0
0
100
0.00
7444--7508
33
2.0
33
100
0
130
30
15
6
47
1.70
9816--9870
2
27.5
2
100
0
110
49
0
0
50
1.00
12660--12742
40
2.1
40
81
4
96
50
1
0
48
1.08
12678--12752
39
1.9
39
83
5
98
50
2
0
46
1.15
12696--12796
29
3.4
29
78
9
96
49
2
1
45
1.28
12773--12814
15
2.8
15
86
10
59
59
4
0
35
1.19
13704--13770
33
2.0
33
100
0
134
23
14
5
55
1.62
14182--14217
2
18.0
2
100
0
72
50
0
0
50
1.00
15885--15927
21
2.0
21
82
8
52
55
4
2
37
1.33

Tables:   1

The End!