Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1661
Parameters: 2 7 7 80 10 50 1000
Length:  51723

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
746--796
26
2.0
26
84
3
68
49
0
0
50
1.00
840--873
18
2.0
16
88
11
50
58
0
0
41
0.98
1418--1450
2
17.0
2
93
6
59
51
0
0
48
1.00
1421--1450
15
2.0
15
100
0
60
53
0
0
46
1.00
4602--4691
30
3.0
31
79
9
96
67
0
1
31
0.98
4712--4776
26
2.5
27
80
9
73
64
6
1
27
1.26
4701--4776
27
2.8
26
75
16
68
64
6
1
27
1.26
4808--4841
14
2.4
14
90
0
50
61
0
2
35
1.11
4861--4929
28
2.4
28
80
9
68
59
1
30
8
1.36
5251--5346
40
2.4
37
80
14
102
27
3
2
67
1.16
5391--5454
15
4.1
15
76
11
65
20
3
1
75
1.03
5384--5472
33
2.7
33
75
18
94
23
2
2
71
1.08
7087--7169
39
2.2
37
80
8
96
53
10
4
31
1.57
7797--7825
15
1.9
15
100
0
58
41
0
51
6
1.28
7902--7990
45
2.0
45
97
0
169
22
8
48
20
1.77
7985--8067
36
2.3
36
100
0
166
22
13
42
21
1.88
10055--10091
12
2.9
14
76
23
53
64
0
0
35
0.94
11701--11741
20
2.1
20
86
4
57
48
2
0
48
1.14
11914--11956
20
2.2
20
82
0
50
58
2
4
34
1.32
14096--14279
34
5.4
34
86
0
244
26
7
26
40
1.81
18694--18878
34
5.5
34
86
0
246
26
7
25
40
1.81
19379--19407
2
15.0
2
92
7
51
48
0
0
51
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19905--19958
2
28.0
2
88
7
85
50
0
1
48
1.11
29002--29031
2
15.0
2
100
0
60
50
0
0
50
1.00
29210--29269
28
2.1
29
81
9
70
61
1
18
18
1.43
35923--36077
72
2.2
72
80
0
166
27
16
18
37
1.92
37294--37327
16
2.1
16
88
0
50
38
5
5
50
1.51
47299--47329
7
4.3
7
92
8
53
16
0
0
83
0.64
47299--47329
15
2.1
14
94
5
53
16
0
0
83
0.64

Tables:   1

The End!