Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1664
Parameters: 2 7 7 80 10 50 1000
Length:  20208

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2960--2985
13
2.0
13
100
0
52
30
15
15
38
1.88
2940--3004
33
2.0
33
87
6
96
27
13
16
41
1.87
3949--4036
37
2.4
36
80
9
108
42
1
5
51
1.33
6311--6407
44
2.2
44
98
0
185
48
4
0
47
1.21
6673--6743
25
2.8
26
72
22
69
49
4
0
46
1.21
15732--15758
13
2.1
13
100
0
54
48
14
7
29
1.71
16565--16673
57
1.9
57
81
3
130
32
17
29
21
1.96
16721--17046
91
3.6
92
93
3
545
29
18
27
24
1.98
16617--17089
43
10.0
46
76
15
384
30
18
27
24
1.98
16814--17087
142
2.0
134
85
8
372
28
18
27
25
1.98
17136--17260
28
4.4
28
87
4
153
19
18
28
34
1.95
17251--17325
35
2.2
35
85
2
107
36
10
32
21
1.88
17303--17475
29
5.9
29
81
6
188
24
16
30
27
1.97
17156--17475
57
5.4
58
71
13
208
26
16
29
27
1.97
17310--17481
86
2.0
87
86
3
240
23
16
31
28
1.96
18902--18961
1
60.0
1
76
0
57
1
0
10
88
0.59
18894--18960
10
6.7
10
81
10
75
1
0
11
86
0.64
18894--18961
13
5.2
12
83
11
82
1
0
11
86
0.63

Tables:   1

The End!