Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1665
Parameters: 2 7 7 80 10 50 1000
Length:  9909

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
210--248
21
1.9
21
89
5
62
38
2
0
58
1.12
2256--2370
19
5.8
19
69
25
69
26
17
13
42
1.86
2303--2331
15
1.9
15
100
0
58
27
13
13
44
1.82
4743--4814
28
2.6
28
86
2
101
25
31
18
25
1.97
4694--4964
105
2.6
104
78
5
244
29
25
12
32
1.93
4954--5171
79
2.8
78
82
2
240
28
22
13
35
1.92
4985--5171
78
2.4
79
82
2
234
28
22
13
34
1.93
8415--8504
19
5.1
18
71
22
75
35
12
15
36
1.85
8461--8485
13
1.9
13
100
0
50
36
16
16
32
1.90
8440--8512
32
2.3
32
97
0
137
34
12
17
35
1.88
8535--8608
20
3.7
20
87
5
105
25
14
12
47
1.79

Tables:   1

The End!