Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1666
Parameters: 2 7 7 80 10 50 1000
Length:  77330

Tables:   1   

This is table  1  of  1  ( 39 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
528--577
21
2.4
21
83
6
57
42
0
16
42
1.47
2510--2535
6
4.3
6
100
0
52
0
15
34
50
1.45
5620--5648
3
9.7
3
100
0
58
68
0
0
31
0.89
6644--6673
1
30.0
1
93
0
51
3
0
96
0
0.21
8066--8109
21
2.2
20
84
8
54
52
0
0
47
1.00
8089--8130
17
2.8
15
86
13
52
52
0
0
47
1.00
14311--14354
23
1.9
23
90
0
70
77
9
0
13
0.99
14754--14784
14
2.1
15
94
5
55
58
0
16
25
1.38
15023--15075
27
2.0
25
82
13
63
50
1
1
45
1.23
16885--16917
2
16.5
2
100
0
66
48
0
0
51
1.00
22096--22153
27
2.1
27
81
6
64
46
5
1
46
1.35
26321--26358
2
19.0
2
94
0
67
50
2
0
47
1.15
29185--29226
2
21.0
2
100
0
84
50
0
0
50
1.00
31426--31450
11
2.3
11
100
0
50
48
0
8
44
1.32
32182--32246
27
2.4
27
84
2
85
27
6
20
46
1.74
42658--42699
3
14.0
3
94
0
75
30
0
2
66
1.04
42752--42784
17
1.9
17
100
0
66
51
18
6
24
1.68
57942--58021
25
3.0
25
83
12
81
53
0
0
46
1.00
57956--58023
25
2.6
27
79
11
86
52
0
0
47
1.00
58038--58062
13
1.9
13
100
0
50
76
0
0
24
0.80
58082--58149
22
3.1
22
80
12
61
58
1
0
39
1.07
57974--58246
115
2.4
111
84
8
345
54
1
1
43
1.16
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58762--59115
122
2.9
117
86
9
471
54
1
2
42
1.21
59365--59449
22
4.0
21
76
11
82
35
4
1
58
1.26
59388--59427
20
1.9
22
90
10
66
35
0
2
62
1.09
59492--59562
21
3.4
20
81
14
72
40
0
1
57
1.07
59392--59661
109
2.4
116
84
10
335
41
1
1
55
1.18
59392--59730
109
2.9
116
79
9
268
43
1
1
53
1.15
59769--59817
14
3.4
15
77
11
57
53
2
0
44
1.12
60072--60108
20
1.9
20
94
5
67
54
0
0
45
1.00
60440--60489
21
2.4
21
83
6
57
44
0
14
42
1.44
62425--62450
6
4.3
6
100
0
52
0
15
34
50
1.45
65360--65387
2
14.0
2
100
0
56
50
0
0
50
1.00
65547--65575
3
9.7
3
100
0
58
68
0
0
31
0.89
67988--68031
21
2.2
20
84
8
54
52
0
0
47
1.00
68011--68052
17
2.8
15
86
13
52
52
0
0
47
1.00
74228--74271
23
1.9
23
90
0
70
77
9
0
13
0.99
76228--76276
19
2.6
20
78
12
59
20
14
4
61
1.49
76763--76805
2
21.5
2
100
0
86
48
0
0
51
1.00

Tables:   1

The End!