Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1669
Parameters: 2 7 7 80 10 50 1000
Length:  38316

Tables:   1   

This is table  1  of  1  ( 45 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45--89
22
2.1
21
83
4
54
48
4
2
44
1.35
983--1050
29
2.3
30
85
7
95
50
2
1
45
1.26
1446--1541
38
2.5
36
80
14
104
40
3
6
50
1.43
1493--1552
31
1.9
32
86
3
86
41
1
8
48
1.43
1539--1759
110
2.0
110
96
0
406
40
8
10
40
1.71
1716--1838
37
3.4
36
78
15
139
48
6
5
39
1.53
1722--1819
32
2.8
33
82
11
126
47
6
7
38
1.56
1996--2073
39
1.9
41
87
7
115
57
5
0
37
1.21
2516--2590
21
3.6
21
75
8
73
37
13
14
34
1.85
3454--3478
10
2.5
10
100
0
50
52
0
12
36
1.39
6290--6314
13
1.9
13
100
0
50
32
16
16
36
1.90
6302--6354
20
2.6
21
84
3
72
39
15
16
28
1.89
6395--6462
33
2.1
32
91
2
109
33
19
14
32
1.92
12594--12631
13
2.9
13
92
0
58
31
13
18
36
1.89
13065--13116
20
2.4
21
87
9
70
19
50
26
3
1.65
15093--15117
13
1.9
13
100
0
50
32
16
16
36
1.90
15105--15156
20
2.5
21
87
3
70
38
15
17
28
1.90
15218--15243
13
2.0
13
100
0
52
30
15
15
38
1.88
15198--15265
33
2.1
33
94
2
120
33
20
13
32
1.91
18022--18125
25
4.2
26
79
16
82
77
0
20
1
0.86
18022--18115
20
4.6
20
78
13
93
77
0
21
1
0.83
18022--18114
38
2.3
40
85
8
120
78
0
20
1
0.81
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18037--18126
28
3.1
27
78
10
99
78
0
18
2
0.85
18022--18126
38
2.7
37
82
11
113
78
0
20
1
0.85
18038--18126
20
4.6
19
79
10
85
78
0
19
2
0.85
25380--25414
18
1.9
18
100
0
70
60
17
0
22
1.37
25382--25421
18
2.2
18
90
0
62
62
15
0
22
1.32
26200--26250
10
5.0
10
82
2
57
0
19
0
80
0.71
26198--26250
20
2.8
18
85
8
70
0
20
0
79
0.74
26534--26759
34
6.7
33
83
8
267
41
26
7
25
1.81
26534--26759
102
2.2
101
88
3
346
41
26
7
25
1.81
31166--31385
34
6.5
33
83
8
273
40
26
7
25
1.82
31166--31385
101
2.2
101
89
2
352
40
26
7
25
1.82
31166--31385
67
3.3
67
82
3
291
40
26
7
25
1.82
31401--31451
20
2.7
19
76
8
59
5
19
1
72
1.15
31925--32001
29
2.7
29
77
4
75
53
11
5
29
1.59
33534--33592
2
30.0
2
77
3
57
45
0
3
50
1.18
33635--33683
20
2.2
23
75
17
59
59
0
0
40
0.98
36975--37016
14
3.1
14
82
3
50
54
0
0
45
0.99
37020--37065
25
1.9
25
86
8
69
45
0
0
54
0.99
37020--37088
23
3.1
23
80
13
58
52
0
0
47
1.00
37439--37477
9
4.1
9
81
12
51
61
0
0
38
0.96
37432--37486
14
3.9
14
83
6
58
60
0
0
40
0.97
37392--37477
21
4.4
20
75
16
67
63
0
0
36
0.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
38051--38101
21
2.5
22
71
12
54
62
0
0
37
0.95

Tables:   1

The End!