Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1673
Parameters: 2 7 7 80 10 50 1000
Length:  12731

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2132--2229
19
5.9
17
72
27
86
35
17
12
34
1.87
2128--2227
32
3.1
32
97
0
182
35
18
12
35
1.87
2152--2208
13
3.9
13
76
24
60
33
17
14
35
1.90
2855--3269
49
8.6
50
71
14
252
32
18
24
25
1.97
2954--3317
43
8.0
43
82
10
440
31
18
24
25
1.98
2902--3325
92
4.6
92
93
1
686
32
17
24
25
1.97
3326--3792
29
16.0
28
83
6
175
22
17
29
30
1.96
3380--3786
59
6.9
59
90
1
570
23
16
30
29
1.96
3365--3786
88
4.8
88
91
2
616
22
16
30
30
1.96
5175--5261
1
87.0
1
76
0
75
1
2
9
87
0.69
5160--5261
19
5.1
20
78
8
84
0
1
11
85
0.74
5175--5261
19
4.9
17
78
12
95
1
2
9
87
0.69
5160--5245
22
4.0
22
80
14
99
0
2
11
86
0.67
5166--5263
40
2.4
41
83
11
128
1
2
12
84
0.76
5160--5263
49
2.1
49
85
5
140
0
1
12
84
0.75
5175--5263
20
4.3
20
80
9
99
1
2
10
86
0.71

Tables:   1

The End!