Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1676
Parameters: 2 7 7 80 10 50 1000
Length:  22870

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9251--9293
17
2.6
16
92
7
68
90
6
2
0
0.52
9254--9305
11
4.6
11
81
11
52
86
7
3
1
0.76
9253--9286
12
2.8
12
95
4
59
91
8
0
0
0.43
9251--9294
1
44.0
1
81
0
52
90
6
2
0
0.51
9267--9305
11
3.6
11
86
6
53
87
5
5
2
0.75
9251--9310
21
3.0
21
82
4
61
85
6
5
3
0.84
10524--11468
28
32.9
29
89
3
1323
28
31
17
22
1.96
10523--11480
57
16.7
56
87
3
1295
28
32
17
22
1.96
11994--12068
20
3.8
20
78
0
87
34
13
12
40
1.81
11994--12071
40
2.0
39
87
2
111
34
12
12
39
1.82
18414--18451
2
19.0
2
100
0
76
50
0
0
50
1.00

Tables:   1

The End!