Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1681
Parameters: 2 7 7 80 10 50 1000
Length:  16734

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5421--5549
52
2.5
52
97
0
240
29
18
17
34
1.94
5421--5569
52
2.9
51
91
4
228
30
18
18
32
1.94
5558--5582
13
1.9
13
100
0
50
36
16
16
32
1.90
5625--5722
19
5.8
18
71
28
90
36
17
12
33
1.87
5620--5720
32
3.1
32
97
1
184
35
17
11
34
1.87
5644--5700
13
3.9
13
76
24
60
33
17
14
35
1.90
8139--8191
20
2.6
21
85
11
74
39
11
18
30
1.86
8139--8212
21
3.6
21
85
7
80
37
13
18
29
1.90
8158--8212
20
2.7
20
88
2
74
38
14
18
29
1.90
8242--8313
20
3.6
20
68
7
65
36
13
9
40
1.78
8235--8312
40
2.0
40
89
0
120
37
14
10
38
1.80
16631--16665
15
2.2
17
90
10
56
28
8
0
62
1.24

Tables:   1

The End!