Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1696
Parameters: 2 7 7 80 10 50 1000
Length:  29609

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7822--7890
32
2.1
33
91
2
113
34
10
17
37
1.83
7906--8052
52
2.9
52
80
9
185
34
18
17
29
1.93
16199--16318
30
3.9
30
81
7
107
24
28
16
30
1.96
16200--16325
32
4.0
32
82
5
125
23
28
15
32
1.95
16299--16500
27
7.0
27
74
15
172
20
35
13
30
1.91
16347--16533
34
6.0
34
72
18
181
19
35
12
32
1.89
16442--16492
26
1.9
27
84
4
68
19
37
15
27
1.92
16320--16533
61
3.5
61
92
1
369
19
35
12
31
1.89
16535--16666
33
4.1
32
91
2
201
28
28
18
25
1.98
16534--16675
65
2.2
64
91
2
223
28
29
17
24
1.97
16712--17860
43
25.0
43
75
12
939
25
25
18
30
1.98
16714--17806
92
12.0
92
87
3
1439
25
25
18
30
1.98
16683--17864
135
8.6
137
82
8
1166
25
25
18
30
1.98
17715--17864
52
2.9
52
89
0
228
23
24
17
34
1.96
18744--18768
13
1.9
13
100
0
50
36
16
16
32
1.90
18723--18793
33
2.1
34
94
2
126
33
11
16
38
1.85
18831--18855
13
1.9
13
100
0
50
32
16
16
36
1.90
18810--18876
34
2.0
33
85
8
91
29
17
13
38
1.88
18864--18989
52
2.4
52
93
0
216
34
21
19
24
1.96
22081--22105
13
1.9
13
100
0
50
32
16
16
36
1.90
22177--22201
13
1.9
13
100
0
50
40
16
20
24
1.91
22158--22220
33
1.9
32
87
3
90
39
14
17
28
1.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23061--23567
149
3.4
148
79
7
510
35
19
18
26
1.95
25637--26181
165
3.3
163
77
7
408
48
8
10
32
1.68
25795--26202
166
2.5
167
78
8
394
48
8
10
32
1.67
29401--29466
24
2.8
24
75
9
62
60
1
0
37
1.06

Tables:   1

The End!