Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1701
Parameters: 2 7 7 80 10 50 1000
Length:  37746

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7333--7366
17
2.0
17
94
0
59
35
8
11
44
1.72
8158--8206
26
2.0
24
84
8
62
20
12
12
55
1.68
8870--8912
22
2.0
22
85
0
59
34
9
9
46
1.68
14461--14505
22
2.0
22
95
0
81
33
17
20
28
1.95
14515--14580
20
3.7
20
73
26
83
39
15
18
27
1.90
14535--14592
13
4.9
13
72
23
65
37
15
17
29
1.90
14514--14592
33
2.4
33
100
0
158
39
15
17
27
1.90
14655--14679
13
1.9
13
100
0
50
32
16
16
36
1.90
21953--22168
91
2.4
91
94
1
380
32
16
16
34
1.92
22136--22187
20
2.6
20
96
0
95
40
17
11
30
1.85
24676--24701
13
2.0
13
100
0
52
38
15
15
30
1.88
24832--24868
13
2.8
13
91
4
56
45
13
5
35
1.66
30913--30938
13
2.0
13
100
0
52
38
15
15
30
1.88
36220--36259
21
2.0
21
90
9
66
77
10
7
5
1.11

Tables:   1

The End!