Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1702
Parameters: 2 7 7 80 10 50 1000
Length:  13748

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
143--203
32
1.9
31
83
9
79
47
1
0
50
1.10
4048--4085
20
1.9
19
85
15
51
47
15
10
26
1.78
4186--4260
20
3.5
20
77
16
71
57
0
0
42
0.98
4186--4249
22
3.0
19
80
17
56
60
0
0
39
0.97
4258--4317
31
2.0
30
83
9
77
65
5
0
30
1.14
4363--4399
2
19.0
2
94
5
67
51
0
0
48
1.00
9397--9459
20
3.3
19
78
15
58
49
0
1
49
1.10
11816--11857
16
2.8
15
82
7
50
73
0
2
23
0.94
13643--13694
25
2.1
24
85
3
68
36
0
1
61
1.07
13649--13694
18
2.8
16
87
9
58
36
0
2
60
1.09

Tables:   1

The End!