Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1713
Parameters: 2 7 7 80 10 50 1000
Length:  18346

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5544--5594
23
2.2
22
86
10
66
49
1
3
45
1.32
5544--5588
23
1.9
24
90
4
74
53
0
4
42
1.21
7173--7199
7
3.9
7
100
0
54
59
11
0
29
1.32
8560--8652
27
3.6
25
82
4
80
47
20
6
25
1.74
8577--8652
27
2.8
27
87
0
107
48
21
5
25
1.70
10530--10575
21
2.1
22
84
4
58
23
30
15
30
1.95
13127--13200
27
2.7
27
78
0
94
47
14
5
32
1.67
15110--15144
18
1.9
18
88
11
54
20
14
0
65
1.26
15239--15274
18
2.0
18
94
0
63
50
2
0
47
1.15
15239--15283
18
2.5
18
88
0
54
51
2
2
44
1.26

Tables:   1

The End!