Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1714
Parameters: 2 7 7 80 10 50 1000
Length:  13048

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
147--195
22
2.1
24
85
7
66
48
0
6
44
1.27
1088--1125
19
2.0
19
89
0
58
42
0
0
57
0.98
2764--2818
22
2.5
23
82
8
62
54
0
0
45
0.99
4261--4298
2
19.5
2
94
5
69
52
0
0
47
1.00
5042--5136
11
9.6
10
71
25
53
34
0
2
63
1.07
5093--5176
14
5.7
15
78
12
77
41
1
0
57
1.06
5106--5178
2
39.0
2
69
17
50
42
1
0
56
1.08
5042--5145
19
5.4
19
75
19
90
35
0
1
62
1.06
5701--5769
29
2.2
32
80
10
81
47
0
1
50
1.09
5716--5775
31
1.9
31
83
12
79
46
0
1
51
1.10
10985--11039
18
3.1
17
82
14
67
32
1
1
63
1.15
11060--11143
10
8.1
11
74
20
83
45
1
1
52
1.16
10985--11128
19
7.7
18
74
14
71
41
0
1
56
1.13
11056--11139
39
2.2
37
78
17
91
42
1
1
54
1.15
11081--11141
30
1.9
30
90
9
95
42
1
1
54
1.20
12029--12100
25
3.2
23
72
20
71
50
1
0
48
1.09

Tables:   1

The End!