Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Please cite: G. Benson, "Tandem repeats finder: a program to analyze DNA sequences" Nucleic Acid Research(1999) Vol. 27, No. 2, pp. 573-580. Sequence: Scaffold1718 Parameters: 2 7 7 80 10 50 1000 Length: 159045

Tables:   1   

This is table  1  of  1  ( 28 repeats found )
Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34--22886
476
48.1
476
91
0
36732
34
15
19
30
1.93
34--22886
951
24.0
952
92
0
36696
34
15
19
30
1.93
22534--23194
348
1.9
348
89
0
1036
36
14
20
29
1.92
22058--23710
824
2.0
824
90
0
2610
35
14
19
30
1.92
22882--33781
476
22.9
475
91
1
16006
34
15
19
30
1.93
38756--38820
18
3.3
18
67
29
51
9
49
1
40
1.44
38759--38877
42
2.8
42
90
0
184
10
45
1
42
1.47
40445--64601
476
50.8
476
89
1
34305
34
15
19
30
1.92
64423--64800
189
2.0
189
87
2
544
37
9
21
32
1.85
63947--65249
665
2.0
665
88
1
1952
35
13
20
31
1.90
64612--67138
476
5.3
475
88
2
3721
34
14
20
30
1.92
64616--67138
951
2.7
949
88
2
3959
34
14
20
30
1.92
67976--68015
15
2.7
15
80
0
53
82
2
12
2
0.87
68758--68843
24
3.8
24
70
17
76
41
2
44
11
1.53
68749--68867
42
2.8
42
89
0
184
42
2
45
9
1.49
73843--89565
476
33.1
476
90
1
22318
34
14
19
30
1.92
89339--89781
217
2.0
217
92
2
730
35
13
21
29
1.92
89556--100718
476
23.5
475
91
1
15962
34
14
19
30
1.92
89556--100719
951
11.7
951
89
2
15991
34
14
19
30
1.92
100492--100934
217
2.0
217
92
2
730
35
13
21
29
1.92
100016--101410
693
2.0
693
94
0
2456
34
14
20
30
1.92
100709--111869
476
23.5
475
91
1
15901
34
14
19
30
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
111643--112085
217
2.0
217
92
2
730
35
13
20
30
1.92
111860--130336
476
38.5
476
88
5
15089
34
14
19
30
1.92
118036--118478
217
2.0
217
93
2
757
35
13
20
29
1.91
122538--123195
217
3.0
216
94
2
1144
35
13
21
29
1.91
130110--130548
214
2.0
216
92
3
735
35
12
21
30
1.91
130327--159028
476
60.4
476
98
1
54600
34
14
19
31
1.92

Tables:   1   

The End!