Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1719
Parameters: 2 7 7 80 10 50 1000
Length:  16157

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9713--9918
80
2.6
80
80
4
202
31
16
28
24
1.96
9875--9944
28
2.5
27
86
4
86
25
18
32
22
1.97
9798--10212
108
3.9
106
73
13
337
31
14
26
27
1.95
9933--10102
52
3.3
52
78
8
159
32
13
24
28
1.93
10089--10155
27
2.4
28
85
9
93
25
20
29
23
1.99
9877--10272
212
1.9
213
88
3
602
32
13
25
28
1.94
12630--12655
13
2.0
13
100
0
52
38
15
15
30
1.88
12609--12675
33
2.0
33
88
0
98
43
16
14
25
1.86
12695--12762
19
3.9
18
76
23
83
38
14
11
35
1.83
12717--12741
13
1.9
13
100
0
50
32
16
16
36
1.90
12698--12760
32
2.0
32
96
0
117
36
15
12
34
1.86

Tables:   1

The End!